View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5633_high_16 (Length: 315)

Name: NF5633_high_16
Description: NF5633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5633_high_16
NF5633_high_16
[»] chr2 (11 HSPs)
chr2 (6-296)||(40894711-40895002)
chr2 (103-226)||(31620525-31620648)
chr2 (73-226)||(35306017-35306170)
chr2 (76-227)||(35298555-35298706)
chr2 (33-226)||(36669023-36669216)
chr2 (122-226)||(31622062-31622166)
chr2 (103-203)||(36666225-36666325)
chr2 (137-226)||(4753528-4753617)
chr2 (165-223)||(4755036-4755094)
chr2 (165-226)||(31621112-31621173)
chr2 (165-214)||(36666795-36666844)
[»] chr3 (11 HSPs)
chr3 (6-226)||(37464829-37465049)
chr3 (103-226)||(11137912-11138035)
chr3 (141-228)||(19801784-19801871)
chr3 (91-205)||(37463700-37463814)
chr3 (78-227)||(18912547-18912696)
chr3 (101-229)||(9099557-9099685)
chr3 (145-226)||(20997633-20997714)
chr3 (100-226)||(18939788-18939915)
chr3 (181-228)||(36163381-36163428)
chr3 (147-228)||(20998993-20999074)
chr3 (181-226)||(36164592-36164637)
[»] chr7 (10 HSPs)
chr7 (37-224)||(42537718-42537905)
chr7 (47-226)||(45291835-45292014)
chr7 (47-226)||(45295960-45296139)
chr7 (63-225)||(40601718-40601882)
chr7 (110-226)||(38516620-38516736)
chr7 (87-217)||(41740948-41741080)
chr7 (63-226)||(40600711-40600876)
chr7 (138-226)||(41739622-41739710)
chr7 (160-226)||(38517746-38517812)
chr7 (76-153)||(33061630-33061707)
[»] chr4 (10 HSPs)
chr4 (79-223)||(8480862-8481006)
chr4 (78-226)||(41774644-41774792)
chr4 (138-226)||(30829927-30830015)
chr4 (33-217)||(8479660-8479845)
chr4 (85-226)||(52190289-52190430)
chr4 (122-226)||(52189186-52189290)
chr4 (87-226)||(31410533-31410671)
chr4 (76-226)||(41780164-41780314)
chr4 (38-213)||(31409326-31409498)
chr4 (110-222)||(23545294-23545406)
[»] scaffold0115 (4 HSPs)
scaffold0115 (33-226)||(4336-4529)
scaffold0115 (33-226)||(12076-12269)
scaffold0115 (79-226)||(5994-6141)
scaffold0115 (79-226)||(13734-13881)
[»] chr6 (8 HSPs)
chr6 (47-226)||(9448648-9448827)
chr6 (63-226)||(227121-227285)
chr6 (63-226)||(226121-226284)
chr6 (137-227)||(18191745-18191835)
chr6 (181-226)||(11020404-11020449)
chr6 (181-225)||(11020178-11020222)
chr6 (182-226)||(18193022-18193066)
chr6 (181-229)||(31855648-31855696)
[»] chr1 (10 HSPs)
chr1 (76-229)||(49919612-49919765)
chr1 (32-226)||(26529508-26529701)
chr1 (102-227)||(26531027-26531152)
chr1 (33-226)||(36573962-36574155)
chr1 (103-226)||(36575475-36575598)
chr1 (165-226)||(36574956-36575017)
chr1 (110-226)||(35062564-35062680)
chr1 (139-226)||(35063596-35063683)
chr1 (165-226)||(26530502-26530563)
chr1 (144-226)||(49917389-49917470)
[»] chr5 (4 HSPs)
chr5 (33-225)||(16727813-16728005)
chr5 (138-227)||(38921454-38921543)
chr5 (110-223)||(35967351-35967464)
chr5 (139-226)||(35968670-35968757)
[»] chr8 (11 HSPs)
chr8 (63-226)||(5005708-5005871)
chr8 (76-227)||(5014735-5014886)
chr8 (103-225)||(3872224-3872346)
chr8 (122-227)||(17863465-17863570)
chr8 (165-226)||(12887725-12887786)
chr8 (141-226)||(37241028-37241113)
chr8 (122-226)||(17864672-17864776)
chr8 (103-226)||(3870768-3870891)
chr8 (137-226)||(32565606-32565695)
chr8 (173-226)||(12888252-12888305)
chr8 (188-228)||(12887022-12887062)


Alignment Details
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 6 - 296
Target Start/End: Original strand, 40894711 - 40895002
Alignment:
Q  6 atggacatc-atcaatttagtcatttgcctacgtggaaggccaatacagcaactgaagtggcaagtctagcggccagattagcacagttaacgcccagtt 104  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40894711 atggacatccatcaatttagtcatttgcctacgtggaaggccaatacagcaactgaagtggcaagtctagcggccagattagcatagttaacgcccagtt 40894810  T
Q  105 aacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcag 204  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  40894811 aacgttttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtacctgatagcgaggtacacttttag 40894910  T
Q  205 ggatccaaatgagagtttactcaaagaatggatgctaagcctttttgagaactctcatagcataaatatagcggttgttcttaatactaagt 296  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40894911 ggatccaaatgagggtttactcaaagaatggatgctaagcctttttgagaactctcatagcataaatctagcggttgttcttaatactaagt 40895002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 31620648 - 31620525
Alignment:
Q  103 ttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttc 202  Q
    |||||| ||||||| || ||||||||||||| |||||||| | |||||||| ||||||||  ||||| || |||||||||||||||||||||||||||||    
T  31620648 ttaacgttttggacttgtatgactaacggaacagacattgagcgagtttttggttcgttttcttgattcaaggacgtatctgatagcgaggtacactttc 31620549  T
Q  203 agggatccaaatgagagtttactc 226  Q
    |||||  |||||||| ||||||||    
T  31620548 agggactcaaatgagggtttactc 31620525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 73 - 226
Target Start/End: Original strand, 35306017 - 35306170
Alignment:
Q  73 agcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatcca 172  Q
    |||| |||||| ||||  |||||||| ||||||||| |||||| | ||||||||||| ||| |||| || |||||||||||  |||||||  ||||| ||    
T  35306017 agcgtccagatcagcaatgttaacgctcagttaacgttttggatgagaatgactaacagaagagactttcggggagtttttttttcgttttcttgattca 35306116  T
Q  173 gggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||| | | ||||||||||||||||||||||||| | ||||||| ||||||||    
T  35306117 gggacatgtttgatagcgaggtacactttcagggacctaaatgagggtttactc 35306170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 227
Target Start/End: Complemental strand, 35298706 - 35298555
Alignment:
Q  76 ggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccaggg 175  Q
    |||||||| ||||  |||||||| ||||||||| |||||| | |||||||||||| || |||| || |||||||||||  | |||||  ||||| |||||    
T  35298706 ggccagatcagcaatgttaacgctcagttaacgttttggatgggaatgactaacgaaagagactttcggggagttttttttgcgttttcttgattcaggg 35298607  T
Q  176 acgtatctgatagcgaggtacactttcagggatccaaatgagagtttactca 227  Q
    ||||   ||||||||||||||||||||||| | ||||||||| |||||||||    
T  35298606 acgtggttgatagcgaggtacactttcaggaacccaaatgagggtttactca 35298555  T

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Target: chr2; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 226
Target Start/End: Original strand, 36669023 - 36669216
Alignment:
Q  33 ctacgtggaaggccaatacagcaactgaagtggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacgga 132  Q
    |||| ||||| |||||||||||| ||||||||||| || || ||  || || | ||| |||||   | |||||||| |||||| |    |||||||| ||    
T  36669023 ctacatggaaagccaatacagcagctgaagtggcatgtgtaacgaacacatcatcaccgttaatatcaagttaacgttttggatgcatttgactaacaga 36669122  T
Q  133 aaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    | |||||||| |||||||||||||| ||||  ||||| |||||||||  ||||||||||||| |||||||| |||||||||| || ||||||||    
T  36669123 acagacattgagggagtttttagtttgttttcttgattcagggacgtggctgatagcgaggtgcactttcatggatccaaattagggtttactc 36669216  T

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Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 31622062 - 31622166
Alignment:
Q  122 tgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtt 221  Q
    |||| ||||||| | |||||| |||||||||||||| ||||  ||||| |||||||||   ||||| ||||||||||||||||||| |||||| || |||    
T  31622062 tgacaaacggaacaaacattgagggagtttttagtttgttttcttgattcagggacgtggttgataacgaggtacactttcagggacccaaataagggtt 31622161  T
Q  222 tactc 226  Q
    |||||    
T  31622162 tactc 31622166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 203
Target Start/End: Complemental strand, 36666325 - 36666225
Alignment:
Q  103 ttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttc 202  Q
    |||||| |||| ||||| ||||||||||||| |||||||| || ||||||||||||||||  ||||| |||  | || ||| || |||||||||||||||    
T  36666325 ttaacgttttgaacgtgtatgactaacggaacagacattgaggaagtttttagttcgttttcttgattcagaaatgtgtctaattgcgaggtacactttc 36666226  T
Q  203 a 203  Q
    |    
T  36666225 a 36666225  T

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Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 4753617 - 4753528
Alignment:
Q  137 acattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    |||||| ||||||||||  ||| ||| ||||||||||||||   ||||||||||||  ||||||||||||| ||||| ||| ||||||||    
T  4753617 acattgagggagtttttgattcatttaattgatccagggactggtctgatagcgagagacactttcagggacccaaacgagggtttactc 4753528  T

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Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 4755036 - 4755094
Alignment:
Q  165 ttgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagttta 223  Q
    |||||| |||||||| ||||||||||||| |||||||||| || ||||||||| |||||    
T  4755036 ttgatctagggacgtgtctgatagcgagggacactttcagagacccaaatgagggttta 4755094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 31621112 - 31621173
Alignment:
Q  165 ttgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||||||||| | | ||||||||||||||||||| ||||| ||||||||  ||||||||    
T  31621112 ttgatccagggacatgtttgatagcgaggtacacttttagggacccaaatgaaggtttactc 31621173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 36666795 - 36666844
Alignment:
Q  165 ttgatccagggacgtatctgatagcgaggtacactttcagggatccaaat 214  Q
    ||||||||||||| ||| ||||||||||||||||||| ||||| ||||||    
T  36666795 ttgatccagggacatatttgatagcgaggtacacttttagggacccaaat 36666844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 5e-53; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 37464829 - 37465049
Alignment:
Q  6 atggacatc-atcaatttagtcatttgcctacgtggaaggccaatacagcaactgaagtggcaagtctagcggccagattagcacagttaacgcccagtt 104  Q
    ||||||||| |||||||||||| ||||| |  |||||| |||||||||||||||||||||||||||||||| ||||||| | |||| ||||||  |||||    
T  37464829 atggacatccatcaatttagtc-tttgcatgtgtggaatgccaatacagcaactgaagtggcaagtctagcagccagatcaacacaattaacgttcagtt 37464927  T
Q  105 aacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcag 204  Q
    |||| |||||||||||||||| ||||||| |||||||  |||||||||| ||| |||||||||||| ||||| ||| |||||||||||  ||||||||||    
T  37464928 aacgttttggacgtgaatgacaaacggaagagacattcagggagtttttggtttgtttcattgatctagggatgtacctgatagcgagcaacactttcag 37465027  T
Q  205 ggatccaaatgagagtttactc 226  Q
    ||| |||||| || ||||||||    
T  37465028 ggacccaaattagggtttactc 37465049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 11138035 - 11137912
Alignment:
Q  103 ttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttc 202  Q
    |||||| |||||||||| || ||||| | || |||||||| |||||||||| ||||||||   ||||||||||| || ||||||||||||||||| |||     
T  11138035 ttaacgttttggacgtgtataactaaagaaacagacattgagggagtttttggttcgttttcatgatccagggatgtgtctgatagcgaggtacattttt 11137936  T
Q  203 agggatccaaatgagagtttactc 226  Q
    || || ||||||||| ||||||||    
T  11137935 agagaaccaaatgagggtttactc 11137912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 19801871 - 19801784
Alignment:
Q  141 tgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactcaa 228  Q
    ||||||||||||| |||||||| ||||||| | ||||||| |||||||||||||||||||||||||| |  |||||| ||||||||||    
T  19801871 tgggggagtttttggttcgtttaattgatctaaggacgtagctgatagcgaggtacactttcagggaccggaatgagggtttactcaa 19801784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 205
Target Start/End: Complemental strand, 37463814 - 37463700
Alignment:
Q  91 gttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcg 190  Q
    |||||| || |||||||| ||||||||| ||||||||| |||| ||||||| |  |||||||| | |||||||||||||||||||||||   ||||||||    
T  37463814 gttaacaccaagttaacgttttggacgtaaatgactaatggaagagacattagatgagtttttggatcgtttcattgatccagggacgtgcttgatagcg 37463715  T
Q  191 aggtacactttcagg 205  Q
    ||  |||||||||||    
T  37463714 agaaacactttcagg 37463700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 227
Target Start/End: Complemental strand, 18912696 - 18912547
Alignment:
Q  78 ccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggac 177  Q
    |||||| ||||  |||||||| ||||||||| |||||| | ||||||||||||||| |||| ||  ||||||||||  | |||||  ||||| |||||||    
T  18912696 ccagatcagcagtgttaacgctcagttaacgttttggatgggaatgactaacggaagagactttcagggagttttttttgcgttttcttgattcagggac 18912597  T
Q  178 gtatctgatagcgaggtacactttcagggatccaaatgagagtttactca 227  Q
     |   | |||| |||||||||||||||||| ||||||||| |||||||||    
T  18912596 atggttaatagtgaggtacactttcagggacccaaatgagggtttactca 18912547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 101 - 229
Target Start/End: Complemental strand, 9099685 - 9099557
Alignment:
Q  101 agttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactt 200  Q
    |||||||| ||||||| |   ||||||||||||   ||||||   |||||||| ||||||||||||||| |||||| ||   ||||||||||||||||||    
T  9099685 agttaacgttttggacttatttgactaacggaaccaacattgaaagagtttttggttcgtttcattgattcagggatgtgcttgatagcgaggtacactt 9099586  T
Q  201 tcagggatccaaatgagagtttactcaaa 229  Q
    | ||||| ||||||||| |||||||||||    
T  9099585 taagggacccaaatgagggtttactcaaa 9099557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 20997714 - 20997633
Alignment:
Q  145 ggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||||| ||| |||| |||||||| |||| ||   ||||||||||||||| ||||||||| ||||||||| ||||||||    
T  20997714 ggagtttttggtttgttttattgatcctgggatgtgcttgatagcgaggtacattttcagggacccaaatgagggtttactc 20997633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 226
Target Start/End: Original strand, 18939788 - 18939915
Alignment:
Q  100 cagttaacgctttggacgtg-aatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacac 198  Q
    ||||||||| |||||| | | |||||||||||||| |||| || ||||||||| |  | |||||  ||||   ||||||||   ||||||||| ||||||    
T  18939788 cagttaacgttttggatgggtaatgactaacggaagagactttcggggagtttgttttgcgttttcttgacttagggacgtggttgatagcgaagtacac 18939887  T
Q  199 tttcagggatccaaatgagagtttactc 226  Q
    ||||||||| ||||||||| ||||||||    
T  18939888 tttcagggacccaaatgagggtttactc 18939915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 36163428 - 36163381
Alignment:
Q  181 tctgatagcgaggtacactttcagggatccaaatgagagtttactcaa 228  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||    
T  36163428 tctgatagcgagggacactttcagggatccaaatgaaggtttactcaa 36163381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 20998993 - 20999074
Alignment:
Q  147 agtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactcaa 228  Q
    |||||||| ||| |||||||||| ||| || || ||||||| | | ||||||||||||||||| |||||||  |||||||||    
T  20998993 agtttttaattcatttcattgattcagtgatgtgtctgataacaatgtacactttcagggatctaaatgaggatttactcaa 20999074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 36164592 - 36164637
Alignment:
Q  181 tctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  36164592 tctgatagcgagggacactttcagggacccaaatgagggtttactc 36164637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 37 - 224
Target Start/End: Complemental strand, 42537905 - 42537718
Alignment:
Q  37 gtggaaggccaatacagcaactgaagtggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaag 136  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||||| | |||| ||||||  || |||||| |||||||||||||||| ||||||| ||    
T  42537905 gtggaatgccaatacagcagctgaagtggcaagtctagcagccagatcaacacaattaacgttcaattaacgttttggacgtgaatgacaaacggaagag 42537806  T
Q  137 acattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttac 224  Q
    ||||| ||||||||||| ||||||||||||||| |||||| ||| |||||||||||  ||||||||||||| |||| |||| ||||||    
T  42537805 acattcggggagtttttggttcgtttcattgattcagggatgtacctgatagcgagcaacactttcagggacccaactgagggtttac 42537718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 45291835 - 45292014
Alignment:
Q  47 aatacagcaactgaagtggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattggggg 146  Q
    |||||| || |||||||||||||| || | | ||  | ||||| |||||| | | |||| || |||||| ||||||||||||||||| |||| ||| |||    
T  45291835 aatacaacagctgaagtggcaagtataacagacatgtcagcaccgttaacactctgttagcgttttggatgtgaatgactaacggaagagactttgaggg 45291934  T
Q  147 agtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||| ||||| ||| ||||| |||||| ||  |||||||||||||||||||||||||| ||||||||| ||||||||    
T  45291935 agtttttggttcgattccttgattcagggatgtgcctgatagcgaggtacactttcagggacccaaatgagggtttactc 45292014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 45295960 - 45296139
Alignment:
Q  47 aatacagcaactgaagtggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattggggg 146  Q
    |||||| || |||||||||||||| || | | ||  | ||||| |||||| | | |||| || |||||| ||||||||||||||||| |||| ||| |||    
T  45295960 aatacaacagctgaagtggcaagtataacagacatgtcagcaccgttaacactctgttagcgttttggatgtgaatgactaacggaagagactttgaggg 45296059  T
Q  147 agtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||| ||||| ||| |||||||| ||| ||  |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  45296060 agtttttggttcgattccttgatccatggatgtgcctgatagcgaggtacacttttagggacccaaatgagggtttactc 45296139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 40601718 - 40601882
Alignment:
Q  63 tggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagtt--cgt 160  Q
    ||||||| | |||| |||||| |||| ||||||||| ||||||||| |||||| | ||||||||||||||| |||| || | |||||||||  ||  |||    
T  40601718 tggcaagaccagcgtccagatcagcagagttaacgctcagttaacgttttggatgggaatgactaacggaagagactttcgaggagttttttttttgcgt 40601817  T
Q  161 ttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttact 225  Q
    ||| ||| || ||||| ||  |||||||||||| ||||||||||||| ||||||||| |||||||    
T  40601818 ttccttgttctagggatgtgcctgatagcgaggcacactttcagggacccaaatgagggtttact 40601882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 38516736 - 38516620
Alignment:
Q  110 tttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatc 209  Q
    |||||| ||||||||||||||| | | || ||| |||||||||| ||| | ||| |||||||||||| || ||||||||||| ||||||||||||||| |    
T  38516736 tttggatgtgaatgactaacgggagaaactttgagggagtttttggttggattccttgatccagggatgtgtctgatagcgatgtacactttcagggacc 38516637  T
Q  210 caaatgagagtttactc 226  Q
    |||||||| ||||||||    
T  38516636 caaatgagggtttactc 38516620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 41740948 - 41741080
Alignment:
Q  87 cacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgat 186  Q
    |||| |||||| |||||||||| |||||||||| ||||||||||||| | | ||||||||||||||| ||| |||| |||||||| |||||| | |||||    
T  41740948 cacacttaacggccagttaacgttttggacgtggatgactaacggaacaaatattgggggagtttttggttagtttaattgatccggggacgcagctgat 41741047  T
Q  187 --agcgaggtacactttcagggatccaaatgag 217  Q
      ||| ||||  ||||||||||| |||||||||    
T  41741048 agagcaaggtgaactttcagggacccaaatgag 41741080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 40600876 - 40600711
Alignment:
Q  63 tggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagtt--cgt 160  Q
    ||||||| | |||| |||||| |||| || |||||| ||||||||| |||||||| ||||||||||||||| |||| || |||||||||||  ||   ||    
T  40600876 tggcaagaccagcgtccagatcagcagagctaacgctcagttaacgttttggacgggaatgactaacggaagagactttcggggagttttttttttgtgt 40600777  T
Q  161 ttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||| ||| |||| ||| ||  ||||||| |||| ||| ||||||||| ||||||||| ||||||||    
T  40600776 ttccttgttccaaggatgtgcctgatagagaggcacattttcagggacccaaatgagggtttactc 40600711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 41739710 - 41739622
Alignment:
Q  138 cattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    |||||||||||||||| |||||||||||||||| ||||| ||  |||||||||||  | ||||||||| | ||||||||| ||||||||    
T  41739710 cattgggggagtttttggttcgtttcattgatctagggatgtgcctgatagcgagcaatactttcaggaacccaaatgagggtttactc 41739622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 38517746 - 38517812
Alignment:
Q  160 tttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    |||| ||||||||||||||| ||||||||||| ||| ||||| |||||  |||||||| ||||||||    
T  38517746 tttcgttgatccagggacgtgtctgatagcgatgtatacttttagggactcaaatgagggtttactc 38517812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 33061707 - 33061630
Alignment:
Q  76 ggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagttttt 153  Q
    |||||||| ||||  ||||| |||||||||||| ||||||   ||||||||||||||| |||| || || ||||||||    
T  33061707 ggccagatcagcaatgttaatgcccagttaacgttttggataggaatgactaacggaagagactttcggagagttttt 33061630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 8480862 - 8481006
Alignment:
Q  79 cagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacg 178  Q
    ||||| |||||||||||||  ||||||||| |||||| | ||||||||||||||| |||| |||||||||||||| || |||||||||||||||||||||    
T  8480862 cagatcagcacagttaacgatcagttaacgttttggatgggaatgactaacggaagagactttgggggagtttttggtgcgtttcattgatccagggacg 8480961  T
Q  179 tatctgatagcgaggtacactttcagggatccaaatgagagttta 223  Q
    |  ||||||||||| ||||||||||||||  ||||||||||||||    
T  8480962 tgactgatagcgagatacactttcagggactcaaatgagagttta 8481006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 41774792 - 41774644
Alignment:
Q  78 ccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggac 177  Q
    |||||| ||||  |||||||| ||||||||| ||||||   ||||||||||||||| | || || |||||||||||  | |||||  ||||| |||||||    
T  41774792 ccagatcagcagtgttaacgctcagttaacgttttggatcggaatgactaacggaagacactttcggggagttttttttgcgttttcttgattcagggac 41774693  T
Q  178 gtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||   ||||||||||||||||||||||||| ||||||||||||||||||    
T  41774692 gtggttgatagcgaggtacactttcagggacccaaatgagagtttactc 41774644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 30830015 - 30829927
Alignment:
Q  138 cattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    |||||||||||||||| |||||||||||||||| ||||| ||  |||||||||||  ||||||||||||| ||||||||| ||||||||    
T  30830015 cattgggggagtttttggttcgtttcattgatctagggatgtgcctgatagcgagcaacactttcagggacccaaatgagggtttactc 30829927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 217
Target Start/End: Complemental strand, 8479845 - 8479660
Alignment:
Q  33 ctacgtggaaggccaatacagcaactgaagtggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacgga 132  Q
    ||||||||||| |||||||| ||||||| |||||| || || ||| || || |  || ||||| |  ||||||||  |||||| |  |||||||||||||    
T  8479845 ctacgtggaagaccaatacaacaactgaggtggcatgtgtaacggacacatcattaccgttaatgatcagttaacattttggatggaaatgactaacgga 8479746  T
Q  133 aaagacattgggggag-tttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgag 217  Q
    | |||| ||||||||| ||||| || ||||  ||||||||||| ||||  |||||||| || |||||||||||||| |||||||||    
T  8479745 agagactttgggggaggtttttggtgcgttgtattgatccaggaacgtggctgatagcaagatacactttcagggacccaaatgag 8479660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 226
Target Start/End: Original strand, 52190289 - 52190430
Alignment:
Q  85 agcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctg 184  Q
    |||||| ||||| || |||||||| |||||| |    ||||||||  || ||||||||||||||||||| |||||||| ||||||||| |||  |  |||    
T  52190289 agcacatttaacaccaagttaacgttttggatgcatttgactaacaaaacagacattgggggagtttttggttcgtttaattgatccatggatctggctg 52190388  T
Q  185 atagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    |||||||| | |||||||||||| ||||||||| ||||||||    
T  52190389 atagcgagatgcactttcagggacccaaatgagggtttactc 52190430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 52189290 - 52189186
Alignment:
Q  122 tgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtt 221  Q
    |||||||||||| | |||||| | ||||||||  || |||| ||||||||||||| ||  ||||||||||||| |||||||||||| ||||||||| |||    
T  52189290 tgactaacggaacatacattgagcgagtttttgatttgtttaattgatccagggatgtggctgatagcgaggtgcactttcagggacccaaatgagggtt 52189191  T
Q  222 tactc 226  Q
    |||||    
T  52189190 tactc 52189186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 226
Target Start/End: Original strand, 31410533 - 31410671
Alignment:
Q  87 cacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgat 186  Q
    |||| ||||||  ||||||||| ||||||||||  |||||||||||| ||| |||| || |||||||  ||||||| |||||| |||| |||| ||||||    
T  31410533 cacacttaacgttcagttaacgttttggacgtgtgtgactaacggaacagatattgagg-agtttttgattcgtttaattgattcaggaacgtgtctgat 31410631  T
Q  187 agcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    |||||||| |||||||||| | | |||| || ||||||||    
T  31410632 agcgaggtgcactttcaggaacctaaataagggtttactc 31410671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 226
Target Start/End: Original strand, 41780164 - 41780314
Alignment:
Q  76 ggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccaggg 175  Q
    |||||||| ||||  |||||||| ||||||||| ||||||   ||||||||||||||| | || || | |||||||||  | |||||  ||||| ||||     
T  41780164 ggccagatcagcagtgttaacgctcagttaacgttttggatcggaatgactaacggaagacactttcgaggagttttttttgcgttttcttgattcagga 41780263  T
Q  176 acgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||   |||||||||||||||||||||| || ||||||||| ||||||||    
T  41780264 acgtggttgatagcgaggtacactttcagagacccaaatgagggtttactc 41780314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 213
Target Start/End: Complemental strand, 31409498 - 31409326
Alignment:
Q  38 tggaaggccaatacagcaactgaagtggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaaga 137  Q
    ||||||||||| ||| || |||||||||||||| || | | || || ||||| |||||| || |||||||| |||||| |    |||||||||||| |||    
T  31409498 tggaaggccaacacaacagctgaagtggcaagtataaccgacacatcagcaccgttaacaccaagttaacgttttggatgcatttgactaacggaacaga 31409399  T
Q  138 cattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaa 213  Q
       || |||||||||| ||||||||  |||||||| ||||||   |||||||||||| |||||||||||| |||||    
T  31409398 ---tgagggagtttttggttcgtttatttgatccaaggacgtggttgatagcgaggtgcactttcagggacccaaa 31409326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 222
Target Start/End: Original strand, 23545294 - 23545406
Alignment:
Q  110 tttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatc 209  Q
    |||||||||| |||||||| | || ||||||||  ||||||||| ||||||||  ||||| ||| ||||| ||||||||| ||||||||||||| |||      
T  23545294 tttggacgtgtatgactaatgaaacagacattgaaggagtttttggttcgttttcttgattcagagacgtgtctgatagcaaggtacactttcaaggact 23545393  T
Q  210 caaatgagagttt 222  Q
    |||||||| ||||    
T  23545394 caaatgagggttt 23545406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 82; Significance: 1e-38; HSPs: 4)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 226
Target Start/End: Complemental strand, 4529 - 4336
Alignment:
Q  33 ctacgtggaaggccaatacagcaactgaagtggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacgga 132  Q
    ||||| |||||||||||||||||||||| |||||| || || ||| || || ||||| |||||||  || |||||| |||||| | |||||||||| |||    
T  4529 ctacgcggaaggccaatacagcaactgaggtggcatgtgtaacggacacatcagcaccgttaacgatcaattaacgttttggatgggaatgactaatgga 4430  T
Q  133 aaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    | |||| |||||||||||||| || ||||||||||||| ||||||||  ||||||||||  |||||||| ||||||||||| ||| ||||||||    
T  4429 agagactttgggggagtttttggtgcgtttcattgatctagggacgtggctgatagcgatatacacttttagggatccaaacgagggtttactc 4336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 226
Target Start/End: Complemental strand, 12269 - 12076
Alignment:
Q  33 ctacgtggaaggccaatacagcaactgaagtggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacgga 132  Q
    ||||| |||||||||||||||||||||| |||||| || || ||| || || ||||| |||||||  || |||||| |||||| | |||||||||| |||    
T  12269 ctacgcggaaggccaatacagcaactgaggtggcatgtgtaacggacacatcagcaccgttaacgatcaattaacgttttggatgggaatgactaatgga 12170  T
Q  133 aaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    | |||| |||||||||||||| || ||||||||||||| ||||||||  ||||||||||  |||||||| ||||||||||| ||| ||||||||    
T  12169 agagactttgggggagtttttggtgcgtttcattgatctagggacgtggctgatagcgatatacacttttagggatccaaacgagggtttactc 12076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 226
Target Start/End: Original strand, 5994 - 6141
Alignment:
Q  79 cagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacg 178  Q
    ||||| ||||||||||| |  ||||||| | |||||||| ||||||||||| ||| |||  |||||||||||||| || ||||||||| ||| |||||||    
T  5994 cagatcagcacagttaatgatcagttaatgttttggacgggaatgactaacagaagagattttgggggagtttttggtgcgtttcattaatctagggacg 6093  T
Q  179 tatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
       ||||||||||||||||||||||||||  |||||||| ||||||||    
T  6094 gggctgatagcgaggtacactttcagggactcaaatgagggtttactc 6141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 226
Target Start/End: Original strand, 13734 - 13881
Alignment:
Q  79 cagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacg 178  Q
    ||||| ||||||||||| |  ||||||| | |||||||| ||||||||||| ||| |||  |||||||||||||| || ||||||||| ||| |||||||    
T  13734 cagatcagcacagttaatgatcagttaatgttttggacgggaatgactaacagaagagattttgggggagtttttggtgcgtttcattaatctagggacg 13833  T
Q  179 tatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
       ||||||||||||||||||||||||||  |||||||| ||||||||    
T  13834 gggctgatagcgaggtacactttcagggactcaaatgagggtttactc 13881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 9e-33; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 9448648 - 9448827
Alignment:
Q  47 aatacagcaactgaagtggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattggggg 146  Q
    |||||| || |||||||||||||| || | | ||  | ||||| |||||| | | |||| || |||||| |||||||||||| |||| |||| ||| |||    
T  9448648 aatacaacagctgaagtggcaagtataacagacatgtcagcaccgttaacactctgttagcgttttggatgtgaatgactaaaggaagagactttgaggg 9448747  T
Q  147 agtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||| ||||| ||| |||||||||||| || ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  9448748 agtttttggttcgattccttgatccagggatgtgtctgatagcgaggtacactttcagggacccaaatgagggtttactc 9448827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 227121 - 227285
Alignment:
Q  63 tggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagtt-cgtt 161  Q
    ||||||| | |||| |||||| |||| ||||||| | ||||||||| |||||| | |||||||||||||||||||| || |||||||||||  || ||||    
T  227121 tggcaagaccagcgtccagatcagcagagttaacactcagttaacgttttggatgggaatgactaacggaaaagactttcggggagtttttttttgcgtt 227220  T
Q  162 tcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    || ||| |||| ||| ||  || |||| |||  |||||||||| || ||||||||| ||||||||    
T  227221 tccttgttccatggatgtgcctaatagtgagacacactttcagagacccaaatgagggtttactc 227285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 226284 - 226121
Alignment:
Q  63 tggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgttt 162  Q
    ||||||| | |||| ||| || |||| ||||||||  ||||||||| | || ||| |||||| |||| ||| |||| ||  ||||||||||  | |||||    
T  226284 tggcaagaccagcgtccaaatcagcagagttaacgttcagttaacgttctgaacgggaatgattaacagaagagactttcagggagttttttttgcgttt 226185  T
Q  163 cattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    | ||| |||| ||| ||  |||||||||||| ||||||||| ||| ||||||||| ||||||||    
T  226184 ccttgttccatggatgtgcctgatagcgaggcacactttcaaggacccaaatgagggtttactc 226121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 18191835 - 18191745
Alignment:
Q  137 acattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactca 227  Q
    |||||||||||||||||  ||| ||  ||||||  ||||||   |||||||||| || ||||||||||||| ||||||||| |||||||||    
T  18191835 acattgggggagtttttgattcattaaattgattgagggactggtctgatagcgtgggacactttcagggacccaaatgagggtttactca 18191745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 11020404 - 11020449
Alignment:
Q  181 tctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  11020404 tctgatagcgagggacactttcagggacccaaatgagggtttactc 11020449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 11020222 - 11020178
Alignment:
Q  181 tctgatagcgaggtacactttcagggatccaaatgagagtttact 225  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||    
T  11020222 tctgatagtgagggacactttcagggacccaaatgagagtttact 11020178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 18193022 - 18193066
Alignment:
Q  182 ctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||||    
T  18193022 ctgatagcgagggacactttcagggacccaaatgagggtttactc 18193066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 31855696 - 31855648
Alignment:
Q  181 tctgatagcgaggtacactttcagggatccaaatgagagtttactcaaa 229  Q
    ||||||||||||  |||||||||  ||| ||||||||||||||||||||    
T  31855696 tctgatagcgagagacactttcaaagattcaaatgagagtttactcaaa 31855648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 76 - 229
Target Start/End: Original strand, 49919612 - 49919765
Alignment:
Q  76 ggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccaggg 175  Q
    |||||||| || ||||||||||  ||||||||| | |||| | |||||||| | |||| |||| |||||||||||||| || ||||||||||||||||||    
T  49919612 ggccagatcagtacagttaacgatcagttaacgttctggatgggaatgactgatggaagagactttgggggagtttttggtgcgtttcattgatccaggg 49919711  T
Q  176 acgtatctgatagcgaggtacactttcagggatccaaatgagagtttactcaaa 229  Q
    | ||  |||||||||| | ||||||||| ||| |||||||||||||||||||||    
T  49919712 aagtgactgatagcgatgcacactttcaaggacccaaatgagagtttactcaaa 49919765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 32 - 226
Target Start/End: Complemental strand, 26529701 - 26529508
Alignment:
Q  32 cctacgtggaaggccaatacagcaactgaagtggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacgg 131  Q
    ||||||||||| |||| |||| || ||||||||| | || || ||| || || ||||| ||||||  | |||||||| |||||| |    |||||||| |    
T  26529701 cctacgtggaaagcca-tacaacagctgaagtggtatgtgtaacggacaaatcagcaccgttaacatcaagttaacgttttggatgcatttgactaacag 26529603  T
Q  132 aaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    || | |||||| |||||||||||||||||||  ||||| ||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  26529602 aacaaacattgagggagtttttagttcgttttcttgattcagggacgtgtctgatagcgaggtacactttcagggacccaaatgagggtttactc 26529508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 26531027 - 26531152
Alignment:
Q  102 gttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacacttt 201  Q
    ||||||| |||||||||| ||||||| | ||| |||||||| |||||||||| ||||||||  ||||| ||||||||| ||| |||||||||||||||||    
T  26531027 gttaacgttttggacgtgtatgactagcagaagagacattgagggagtttttggttcgttttcttgattcagggacgtgtctaatagcgaggtacacttt 26531126  T
Q  202 cagggatccaaatgagagtttactca 227  Q
    |||||| | ||||||| |||||||||    
T  26531127 cagggaccaaaatgagggtttactca 26531152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 33 - 226
Target Start/End: Complemental strand, 36574155 - 36573962
Alignment:
Q  33 ctacgtggaaggccaatacagcaactgaagtggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacgga 132  Q
    |||||||||| ||||||| | || ||||||||||| || || ||| || || ||||| |||| |  | |||||||| |||||| |    |||||||||||    
T  36574155 ctacgtggaaagccaatataacagctgaagtggcatgtgtaacggacacatcagcaccgttagcatcaagttaacgttttggatgcatttgactaacgga 36574056  T
Q  133 aaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    | |||||||| |||||||||||||||||||  ||||| |||||||||   ||||||||||||||||||||||||| | ||||||| ||||||||    
T  36574055 acagacattgagggagtttttagttcgttttcttgattcagggacgtggttgatagcgaggtacactttcagggacctaaatgagtgtttactc 36573962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 36575475 - 36575598
Alignment:
Q  103 ttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttc 202  Q
    |||||| ||||||| || ||||||||||||| |||||||| || ||||||| ||||||||  |||||  | |||||| ||||||||||||||||||||||    
T  36575475 ttaacgttttggacttgtatgactaacggaacagacattgaggaagtttttggttcgttttcttgatttaaggacgtgtctgatagcgaggtacactttc 36575574  T
Q  203 agggatccaaatgagagtttactc 226  Q
    |||||  |||||||| ||||||||    
T  36575575 agggactcaaatgagggtttactc 36575598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 36575017 - 36574956
Alignment:
Q  165 ttgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||||||||| | | ||||||||||||||||||||||||| |||||||| |||||||||    
T  36575017 ttgatccagggacatgtttgatagcgaggtacactttcagggacccaaatgaaagtttactc 36574956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 35062680 - 35062564
Alignment:
Q  110 tttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatc 209  Q
    |||||||||| ||||||||||||| | ||||||||||||||||| ||| |||| |||||| |||||| ||   ||||| ||||||  ||||| ||| | |    
T  35062680 tttggacgtggatgactaacggaacaaacattgggggagtttttggttagtttaattgattcagggatgtggttgataacgaggtgaacttttaggaacc 35062581  T
Q  210 caaatgagagtttactc 226  Q
    |||||||  ||||||||    
T  35062580 caaatgaaggtttactc 35062564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 35063596 - 35063683
Alignment:
Q  139 attgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||||||||||| |||||||||||||||| || || ||  ||||||| |||  |||||||||| || ||||||||| ||||||||    
T  35063596 attgggggagtttttggttcgtttcattgatctagagatgtgcctgatagtgagcaacactttcagagacccaaatgagggtttactc 35063683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 26530563 - 26530502
Alignment:
Q  165 ttgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||||||||| | | ||||||||||||||||||||||||| ||||||||  ||||||||    
T  26530563 ttgatccagggacatgtttgatagcgaggtacactttcagggacccaaatgaaggtttactc 26530502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 49917470 - 49917389
Alignment:
Q  144 gggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||||||||||| ||  ||||||||| ||| ||  || |||||||| || |||||||| || ||||||||||||||||||    
T  49917470 gggagtttttagttcattaaattgatccaaggatgtgact-atagcgagctatactttcagagacccaaatgagagtttactc 49917389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 8e-24; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 33 - 225
Target Start/End: Complemental strand, 16728005 - 16727813
Alignment:
Q  33 ctacgtggaaggccaatacagcaactgaagtggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacgga 132  Q
    |||||||||| |||| || | || ||||||||||| || || ||| || || ||||| ||||||  | |||||| | |||||| |    |||||||||||    
T  16728005 ctacgtggaaagccagtataacagctgaagtggcatgtgtaacggacacatcagcaccgttaacatcaagttaatgttttggatgcatttgactaacgga 16727906  T
Q  133 aaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttact 225  Q
    | |||||||| || ||||||||||||||||  ||||| |||| ||||  ||||||||||||||||||||||| || ||||||||| |||||||    
T  16727905 acagacattgaggaagtttttagttcgttttcttgattcaggaacgtggctgatagcgaggtacactttcagcgacccaaatgagggtttact 16727813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 38921543 - 38921454
Alignment:
Q  138 cattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactca 227  Q
    |||||||||||||||| |||| ||||||||||| ||||| ||  ||||||| |||  ||||||||||||| ||||||||| |||||||||    
T  38921543 cattgggggagtttttggttcatttcattgatctagggatgtgcctgatagtgagcaacactttcagggacccaaatgagggtttactca 38921454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 35967464 - 35967351
Alignment:
Q  110 tttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatc 209  Q
    ||||||||||  |||||||||||| | ||||||||||||||||| ||| |||| |||||| |  ||| ||  |||||| ||| ||  |||||||||||||    
T  35967464 tttggacgtggttgactaacggaacaaacattgggggagtttttggttagtttaattgattcgaggatgtggctgataacgatgtgaactttcagggatc 35967365  T
Q  210 caaatgagagttta 223  Q
    |||||||| |||||    
T  35967364 caaatgagggttta 35967351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 35968670 - 35968757
Alignment:
Q  139 attgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||||||||||| |||||||||||||||| | | | ||  ||||||||||   |||||||||||||||||| | || ||||||||    
T  35968670 attgggggagtttttggttcgtttcattgatctatgaatgtgcctgatagcgaacaacactttcagggatccaattaagggtttactc 35968757  T

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Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 5005871 - 5005708
Alignment:
Q  63 tggcaagtctagcggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgttt 162  Q
    ||||||| | |||| |||||| ||||  |||||||| ||||||||| ||||||   ||||||||||||||| | || || | |||||||||  | |||||    
T  5005871 tggcaagaccagcgtccagatcagcagtgttaacgctcagttaacgttttggatcggaatgactaacggaagacactttcgaggagttttttttgcgttt 5005772  T
Q  163 cattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
      ||||| |||||||||   ||||||||||||||||||||||||| ||||||||| ||||||||    
T  5005771 tcttgattcagggacgtggttgatagcgaggtacactttcagggacccaaatgagggtttactc 5005708  T

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Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 76 - 227
Target Start/End: Original strand, 5014735 - 5014886
Alignment:
Q  76 ggccagattagcacagttaacgcccagttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccaggg 175  Q
    |||||||| ||||  |||||||| ||||||||| ||||||   ||||||||||||||| | || || | |||||||||  | |||||  ||||| || ||    
T  5014735 ggccagatcagcagtgttaacgctcagttaacgttttggatcggaatgactaacggaagacactttcgaggagttttttttgcgttttcttgattcaagg 5014834  T
Q  176 acgtatctgatagcgaggtacactttcagggatccaaatgagagtttactca 227  Q
    ||||   ||||||||||||||||||||||||| ||||||||| |||||||||    
T  5014835 acgtggttgatagcgaggtacactttcagggacccaaatgagggtttactca 5014886  T

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Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 225
Target Start/End: Original strand, 3872224 - 3872346
Alignment:
Q  103 ttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttc 202  Q
    |||||| ||||||||  | |||||||||||| |  ||||| | |||||||| |||||||| |||||| |||||||||  ||||||||||||| |||||||    
T  3872224 ttaacgttttggacgaaattgactaacggaataaccattgagagagtttttggttcgtttaattgatacagggacgtggctgatagcgaggtgcactttc 3872323  T
Q  203 agggatccaaatgagagtttact 225  Q
    ||||| ||||| ||| |||||||    
T  3872324 agggacccaaacgagggtttact 3872346  T

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Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 17863570 - 17863465
Alignment:
Q  122 tgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtt 221  Q
    ||||| |||||| | ||||||| ||||||||| |||  ||| ||||||||| ||| ||  ||||||||||||| |||||||||||| ||||||||| |||    
T  17863570 tgactgacggaacatacattggaggagtttttggtttatttaattgatccaaggatgtggctgatagcgaggtgcactttcagggacccaaatgagggtt 17863471  T
Q  222 tactca 227  Q
    ||||||    
T  17863470 tactca 17863465  T

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Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 12887725 - 12887786
Alignment:
Q  165 ttgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||||||||  | |||||| |||||||||||||||||||| ||||||||| ||||||||    
T  12887725 ttgatccagggatatgtctgatcgcgaggtacactttcagggacccaaatgagggtttactc 12887786  T

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Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 37241113 - 37241028
Alignment:
Q  141 tgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||||||||| || ||||||||||||||| | ||||  ||||||||||| |||||||||||| | ||||| |||  |||||||    
T  37241113 tgggggagtttttggtgcgtttcattgatccaagaacgtgactgatagcgagatacactttcaggaacccaaacgaggatttactc 37241028  T

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Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 17864672 - 17864776
Alignment:
Q  122 tgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtt 221  Q
    ||||||||  || |||||||| ||||||| || ||||||||  ||||||| |||| ||  ||||||||||| | |||||||| ||| ||||||||| |||    
T  17864672 tgactaacaaaatagacattgagggagttcttggttcgtttatttgatccggggatgtggctgatagcgagatgcactttcaaggaaccaaatgagggtt 17864771  T
Q  222 tactc 226  Q
    |||||    
T  17864772 tactc 17864776  T

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Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 3870891 - 3870768
Alignment:
Q  103 ttaacgctttggacgtgaatgactaacggaaaagacattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttc 202  Q
    |||||| ||||||||  | |||||||||||| |   |||||||||||||||  |||| || ||||||| ||||||||  ||||||||||  | || ||||    
T  3870891 ttaacgttttggacgaaattgactaacggaacaactattgggggagtttttgattcgcttaattgatctagggacgtggctgatagcgaaatgcattttc 3870792  T
Q  203 agggatccaaatgagagtttactc 226  Q
    ||||| |||| |||| ||||||||    
T  3870791 agggacccaagtgagggtttactc 3870768  T

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Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 226
Target Start/End: Original strand, 32565606 - 32565695
Alignment:
Q  137 acattgggggagtttttagttcgtttcattgatccagggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    |||||||||||||||||  ||| ||  ||||||| ||||||   ||||||||||||| ||||||||||||| | ||| ||| ||||||||    
T  32565606 acattgggggagtttttgattcattaaattgatcgagggactggtctgatagcgagggacactttcagggacctaaacgagggtttactc 32565695  T

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Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 12888252 - 12888305
Alignment:
Q  173 gggacgtatctgatagcgaggtacactttcagggatccaaatgagagtttactc 226  Q
    ||||||| ||||||||||||||||| |||||||||  ||||||||  |||||||    
T  12888252 gggacgtgtctgatagcgaggtacaatttcagggactcaaatgaggatttactc 12888305  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 12887062 - 12887022
Alignment:
Q  188 gcgaggtacactttcagggatccaaatgagagtttactcaa 228  Q
    |||| |||||||||||||| | |||||||||||||||||||    
T  12887062 gcgaagtacactttcagggtttcaaatgagagtttactcaa 12887022  T

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