View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5633_low_21 (Length: 251)
Name: NF5633_low_21
Description: NF5633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5633_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 48450079 - 48449858
Alignment:
| Q |
18 |
ataatccgccatacaaacactgtcatcgtcacaatcacattcaccagatgtataatcgtcgcacatcacgtccatatcaacgctttctttcggtaacctg |
117 |
Q |
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| T |
48450079 |
ataatccgctatacaaacactgtcatcgtcacaatcacattcaccagatgtataatcgtcgcacatcacgtccatatcaacgctttctttcggtaacctg |
48449980 |
T |
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| Q |
118 |
tttctccaatgtttcttaatttccacaagcctctctatccaattagctctatttactctctcttcattactagtttccaccatgttttcctcaatattta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48449979 |
tttctccaatgtttcttaatttccacaagcctctctatccaattagctctatttactctctcttcattactagtttccaccatgttttcctcaatattta |
48449880 |
T |
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| Q |
218 |
catccttctcatttttattcat |
239 |
Q |
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|||||||||| |||||||||| |
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| T |
48449879 |
catccttctcccttttattcat |
48449858 |
T |
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