View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5634_high_3 (Length: 448)

Name: NF5634_high_3
Description: NF5634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5634_high_3
NF5634_high_3
[»] chr3 (59 HSPs)
chr3 (199-342)||(20286921-20287064)
chr3 (206-340)||(31342031-31342165)
chr3 (341-448)||(47426341-47426448)
chr3 (351-448)||(50934501-50934598)
chr3 (206-315)||(11512411-11512520)
chr3 (345-446)||(44380249-44380350)
chr3 (344-447)||(47186169-47186272)
chr3 (349-447)||(31187144-31187242)
chr3 (349-447)||(42664672-42664770)
chr3 (206-341)||(22893890-22894033)
chr3 (349-447)||(34029365-34029463)
chr3 (343-418)||(32319468-32319543)
chr3 (345-448)||(33509675-33509778)
chr3 (352-446)||(39498744-39498838)
chr3 (171-235)||(41752953-41753017)
chr3 (345-416)||(10179868-10179939)
chr3 (373-448)||(17466296-17466371)
chr3 (179-233)||(30734489-30734543)
chr3 (345-448)||(35094541-35094646)
chr3 (363-448)||(37742738-37742823)
chr3 (345-416)||(10018671-10018742)
chr3 (172-230)||(51046163-51046221)
chr3 (179-235)||(1801443-1801499)
chr3 (181-333)||(29081598-29081751)
chr3 (199-343)||(48342783-48342927)
chr3 (172-235)||(43139794-43139857)
chr3 (172-235)||(47492132-47492195)
chr3 (179-235)||(41753049-41753105)
chr3 (209-339)||(32385358-32385489)
chr3 (179-235)||(45103106-45103162)
chr3 (180-235)||(7977585-7977640)
chr3 (345-416)||(10123211-10123282)
chr3 (179-262)||(48342214-48342296)
chr3 (179-229)||(55223229-55223279)
chr3 (172-209)||(1801597-1801634)
chr3 (305-341)||(11512519-11512555)
chr3 (179-235)||(18321648-18321704)
chr3 (179-235)||(30734399-30734455)
chr3 (179-235)||(33689173-33689229)
chr3 (199-235)||(47492064-47492100)
chr3 (283-333)||(22894000-22894051)
chr3 (349-408)||(34955072-34955131)
chr3 (188-234)||(39057043-39057089)
chr3 (179-229)||(39429996-39430046)
chr3 (179-225)||(49159493-49159539)
chr3 (179-212)||(1272557-1272590)
chr3 (209-250)||(16205736-16205777)
chr3 (206-263)||(20496553-20496609)
chr3 (186-235)||(30580841-30580890)
chr3 (344-405)||(42273328-42273389)
chr3 (344-405)||(46489771-46489832)
chr3 (305-333)||(11512393-11512421)
chr3 (206-246)||(17546997-17547037)
chr3 (179-235)||(30580753-30580809)
chr3 (206-262)||(36738285-36738341)
chr3 (305-341)||(36738385-36738421)
chr3 (305-333)||(48342214-48342242)
chr3 (305-333)||(49159511-49159539)
chr3 (179-231)||(50524791-50524843)
[»] chr1 (68 HSPs)
chr1 (210-340)||(15928073-15928204)
chr1 (179-312)||(9884838-9884971)
chr1 (206-340)||(50754748-50754891)
chr1 (199-340)||(9379835-9379985)
chr1 (345-448)||(29119397-29119500)
chr1 (345-448)||(32676131-32676234)
chr1 (343-447)||(8809714-8809818)
chr1 (206-315)||(28739338-28739447)
chr1 (344-443)||(25161303-25161402)
chr1 (350-448)||(2569037-2569135)
chr1 (179-302)||(6539597-6539720)
chr1 (172-235)||(37155036-37155099)
chr1 (344-446)||(8462123-8462224)
chr1 (199-341)||(10449446-10449588)
chr1 (345-411)||(46435563-46435629)
chr1 (172-235)||(29179682-29179745)
chr1 (172-235)||(46931987-46932050)
chr1 (168-235)||(48994002-48994069)
chr1 (214-341)||(28045350-28045487)
chr1 (172-230)||(44706874-44706932)
chr1 (351-448)||(6223052-6223149)
chr1 (179-235)||(48993914-48993970)
chr1 (172-235)||(5995359-5995422)
chr1 (349-447)||(35998251-35998349)
chr1 (354-431)||(7214501-7214578)
chr1 (178-235)||(36290492-36290549)
chr1 (179-340)||(44938794-44938955)
chr1 (392-448)||(8555471-8555527)
chr1 (379-442)||(3688917-3688980)
chr1 (181-235)||(15220896-15220950)
chr1 (172-218)||(48498405-48498451)
chr1 (179-235)||(1091629-1091685)
chr1 (179-235)||(5995454-5995510)
chr1 (179-235)||(9157307-9157363)
chr1 (179-235)||(17127561-17127617)
chr1 (179-235)||(17127649-17127705)
chr1 (179-235)||(21630039-21630095)
chr1 (179-235)||(29179594-29179650)
chr1 (179-235)||(29371453-29371509)
chr1 (179-235)||(46932067-46932122)
chr1 (179-234)||(31342260-31342315)
chr1 (205-243)||(4579191-4579229)
chr1 (181-235)||(28395636-28395690)
chr1 (189-235)||(32540755-32540801)
chr1 (194-263)||(33734213-33734282)
chr1 (172-209)||(49445013-49445050)
chr1 (199-251)||(719008-719060)
chr1 (172-208)||(8337954-8337990)
chr1 (346-390)||(16679829-16679873)
chr1 (199-247)||(26011735-26011783)
chr1 (179-231)||(32540837-32540889)
chr1 (179-215)||(49444910-49444946)
chr1 (170-233)||(12441042-12441105)
chr1 (179-234)||(36381589-36381644)
chr1 (227-262)||(41526193-41526228)
chr1 (199-233)||(421235-421269)
chr1 (179-233)||(33219660-33219714)
chr1 (311-341)||(34026751-34026781)
chr1 (309-342)||(28739302-28739335)
chr1 (172-209)||(34062208-34062245)
chr1 (179-208)||(44183438-44183467)
chr1 (305-341)||(9884973-9885009)
chr1 (349-405)||(18056140-18056196)
chr1 (305-333)||(28739437-28739465)
chr1 (181-209)||(29371376-29371404)
chr1 (345-409)||(42239198-42239262)
chr1 (309-341)||(44381907-44381939)
chr1 (196-264)||(47557276-47557344)
[»] chr2 (50 HSPs)
chr2 (179-340)||(39819060-39819230)
chr2 (345-446)||(21603954-21604055)
chr2 (206-343)||(7755360-7755497)
chr2 (345-448)||(34392154-34392257)
chr2 (201-340)||(12918552-12918700)
chr2 (353-448)||(7381695-7381790)
chr2 (345-445)||(37357997-37358097)
chr2 (210-315)||(15562232-15562337)
chr2 (364-447)||(23863877-23863958)
chr2 (171-230)||(29508781-29508840)
chr2 (172-222)||(16514414-16514464)
chr2 (348-448)||(4775632-4775733)
chr2 (178-258)||(30610238-30610317)
chr2 (179-235)||(32545783-32545839)
chr2 (180-235)||(6217222-6217277)
chr2 (170-216)||(37632979-37633025)
chr2 (170-235)||(9173066-9173131)
chr2 (179-235)||(16514509-16514565)
chr2 (179-235)||(32545873-32545929)
chr2 (179-235)||(38933672-38933728)
chr2 (184-235)||(14229355-14229406)
chr2 (179-235)||(6722036-6722092)
chr2 (179-231)||(14470589-14470641)
chr2 (373-448)||(4779608-4779683)
chr2 (381-444)||(41095863-41095926)
chr2 (179-260)||(5913522-5913602)
chr2 (172-209)||(6217326-6217363)
chr2 (179-228)||(29508687-29508736)
chr2 (186-235)||(33018630-33018679)
chr2 (172-208)||(1992235-1992271)
chr2 (199-235)||(5095818-5095854)
chr2 (206-311)||(13421718-13421823)
chr2 (209-249)||(18182591-18182631)
chr2 (349-405)||(37811090-37811146)
chr2 (305-343)||(5913512-5913550)
chr2 (176-210)||(9172984-9173018)
chr2 (369-447)||(10163501-10163579)
chr2 (181-231)||(14892349-14892399)
chr2 (345-446)||(14565928-14566029)
chr2 (179-228)||(45213892-45213941)
chr2 (305-333)||(7755342-7755370)
chr2 (305-340)||(12918498-12918534)
chr2 (305-333)||(13421813-13421841)
chr2 (173-209)||(29925672-29925708)
chr2 (206-262)||(34563326-34563382)
chr2 (344-404)||(34904298-34904358)
chr2 (172-208)||(37961705-37961741)
chr2 (179-235)||(37961791-37961847)
chr2 (172-208)||(38933586-38933622)
chr2 (305-333)||(39819060-39819088)
[»] chr4 (61 HSPs)
chr4 (208-341)||(6607394-6607527)
chr4 (179-340)||(31846782-31846952)
chr4 (345-448)||(12473699-12473802)
chr4 (345-448)||(12528108-12528211)
chr4 (351-447)||(33249448-33249544)
chr4 (345-448)||(21260789-21260892)
chr4 (350-446)||(35869646-35869742)
chr4 (344-447)||(52012772-52012875)
chr4 (344-444)||(52910126-52910226)
chr4 (350-448)||(22343337-22343435)
chr4 (345-427)||(55590477-55590559)
chr4 (351-432)||(34829172-34829253)
chr4 (348-447)||(9799437-9799536)
chr4 (345-448)||(51811909-51812012)
chr4 (179-234)||(30709986-30710041)
chr4 (345-447)||(49999662-49999764)
chr4 (173-235)||(51265436-51265498)
chr4 (207-340)||(31012152-31012294)
chr4 (172-235)||(6271692-6271755)
chr4 (208-315)||(6608375-6608482)
chr4 (172-235)||(23444354-23444417)
chr4 (179-233)||(35682163-35682217)
chr4 (381-440)||(1796163-1796222)
chr4 (201-263)||(43063537-43063599)
chr4 (181-235)||(47661927-47661981)
chr4 (174-235)||(30861859-30861920)
chr4 (179-235)||(3862631-3862687)
chr4 (179-235)||(3871388-3871444)
chr4 (179-235)||(6271787-6271843)
chr4 (179-235)||(42375095-42375151)
chr4 (349-447)||(47943157-47943256)
chr4 (181-235)||(23444268-23444322)
chr4 (345-448)||(33174513-33174613)
chr4 (185-235)||(35682251-35682301)
chr4 (179-235)||(26186099-26186155)
chr4 (179-235)||(51265530-51265586)
chr4 (171-210)||(42375008-42375047)
chr4 (172-210)||(47404686-47404724)
chr4 (185-235)||(53954695-53954745)
chr4 (208-249)||(9712943-9712984)
chr4 (172-209)||(31430560-31430597)
chr4 (345-398)||(49998477-49998530)
chr4 (179-235)||(5048885-5048941)
chr4 (209-249)||(22435379-22435419)
chr4 (206-258)||(54223577-54223629)
chr4 (199-254)||(2254553-2254608)
chr4 (276-330)||(30023639-30023694)
chr4 (304-338)||(32008368-32008402)
chr4 (206-248)||(38324924-38324966)
chr4 (181-231)||(44380019-44380069)
chr4 (373-443)||(46719953-46720023)
chr4 (206-239)||(53261114-53261147)
chr4 (304-333)||(54613030-54613059)
chr4 (179-231)||(2325069-2325121)
chr4 (349-405)||(28092859-28092915)
chr4 (305-333)||(31846924-31846952)
chr4 (179-251)||(32008325-32008397)
chr4 (179-235)||(44379927-44379983)
chr4 (199-235)||(46321440-46321476)
chr4 (199-235)||(47661859-47661895)
chr4 (349-405)||(54277638-54277694)
[»] chr8 (39 HSPs)
chr8 (343-448)||(41179636-41179741)
chr8 (341-447)||(24337904-24338010)
chr8 (358-447)||(4708381-4708470)
chr8 (349-447)||(1514802-1514900)
chr8 (208-300)||(43465112-43465204)
chr8 (348-448)||(18168383-18168483)
chr8 (348-448)||(18631940-18632040)
chr8 (351-448)||(32825908-32826005)
chr8 (350-446)||(11254103-11254198)
chr8 (168-235)||(35441054-35441121)
chr8 (172-235)||(5033151-5033214)
chr8 (171-233)||(5667184-5667246)
chr8 (162-235)||(8243473-8243546)
chr8 (171-235)||(2581814-2581878)
chr8 (179-235)||(5033246-5033302)
chr8 (4-79)||(7166811-7166886)
chr8 (172-235)||(22649835-22649898)
chr8 (172-235)||(33841676-33841739)
chr8 (179-235)||(5667094-5667150)
chr8 (173-233)||(10086748-10086808)
chr8 (179-235)||(33841588-33841644)
chr8 (179-235)||(35440966-35441022)
chr8 (186-235)||(10086842-10086891)
chr8 (179-235)||(8796419-8796475)
chr8 (9-96)||(3264720-3264807)
chr8 (209-336)||(33763461-33763589)
chr8 (172-249)||(13469969-13470046)
chr8 (209-262)||(31470771-31470824)
chr8 (199-259)||(7931605-7931664)
chr8 (175-231)||(45191216-45191272)
chr8 (305-340)||(1605047-1605082)
chr8 (179-233)||(1880236-1880289)
chr8 (185-235)||(8796507-8796557)
chr8 (205-235)||(31470849-31470879)
chr8 (305-343)||(43465221-43465259)
chr8 (181-235)||(43844554-43844608)
chr8 (186-263)||(6894075-6894152)
chr8 (309-342)||(16687510-16687543)
chr8 (206-239)||(45051339-45051372)
[»] chr7 (37 HSPs)
chr7 (344-446)||(35341530-35341632)
chr7 (206-338)||(17272723-17272864)
chr7 (344-445)||(48250148-48250249)
chr7 (206-261)||(7211884-7211939)
chr7 (211-291)||(7211947-7212027)
chr7 (206-315)||(29681789-29681897)
chr7 (345-448)||(40893114-40893218)
chr7 (172-235)||(11016859-11016922)
chr7 (354-443)||(31306951-31307041)
chr7 (174-231)||(45231939-45231996)
chr7 (172-235)||(34854780-34854843)
chr7 (172-235)||(41018313-41018376)
chr7 (179-235)||(4290630-4290686)
chr7 (179-235)||(11016954-11017010)
chr7 (167-235)||(38975790-38975858)
chr7 (179-232)||(42628383-42628436)
chr7 (206-262)||(25099327-25099383)
chr7 (172-235)||(48000684-48000747)
chr7 (350-448)||(48072389-48072485)
chr7 (174-235)||(4290537-4290598)
chr7 (342-414)||(40856384-40856456)
chr7 (400-448)||(40856481-40856529)
chr7 (179-235)||(48000822-48000878)
chr7 (305-340)||(29681905-29681940)
chr7 (199-262)||(43500001-43500064)
chr7 (206-264)||(46282892-46282951)
chr7 (374-448)||(32694643-32694717)
chr7 (179-217)||(38975908-38975946)
chr7 (172-229)||(15027532-15027589)
chr7 (172-209)||(29053416-29053453)
chr7 (209-249)||(6980948-6980988)
chr7 (179-235)||(27028725-27028781)
chr7 (209-249)||(42494799-42494839)
chr7 (396-446)||(23178469-23178519)
chr7 (206-235)||(32315731-32315760)
chr7 (305-333)||(7211866-7211894)
chr7 (305-333)||(17272705-17272733)
[»] chr5 (57 HSPs)
chr5 (344-446)||(39570118-39570220)
chr5 (350-448)||(19357334-19357432)
chr5 (345-446)||(11607609-11607710)
chr5 (179-312)||(29385313-29385446)
chr5 (345-448)||(1826254-1826357)
chr5 (355-446)||(33858613-33858704)
chr5 (345-447)||(13015376-13015478)
chr5 (342-447)||(29989954-29990059)
chr5 (345-447)||(9827783-9827885)
chr5 (349-447)||(38010688-38010786)
chr5 (181-264)||(1839970-1840053)
chr5 (179-315)||(19417442-19417577)
chr5 (349-445)||(13086752-13086848)
chr5 (349-447)||(13478119-13478217)
chr5 (210-340)||(5215560-5215700)
chr5 (366-448)||(33271630-33271712)
chr5 (172-235)||(19655148-19655211)
chr5 (165-235)||(291080-291150)
chr5 (179-235)||(2953275-2953331)
chr5 (206-311)||(9177874-9177979)
chr5 (211-340)||(36568733-36568871)
chr5 (351-447)||(13421084-13421180)
chr5 (179-235)||(16971229-16971285)
chr5 (179-235)||(29699452-29699508)
chr5 (178-262)||(7137637-7137721)
chr5 (196-341)||(12605570-12605715)
chr5 (172-229)||(19598322-19598379)
chr5 (407-448)||(42148203-42148244)
chr5 (179-235)||(3899924-3899980)
chr5 (179-235)||(19655243-19655299)
chr5 (206-262)||(23219360-23219416)
chr5 (179-235)||(291182-291238)
chr5 (179-235)||(12913800-12913856)
chr5 (179-235)||(13312261-13312317)
chr5 (400-447)||(37881191-37881238)
chr5 (179-233)||(2093934-2093988)
chr5 (172-210)||(2953197-2953235)
chr5 (181-235)||(30117827-30117881)
chr5 (176-233)||(12913890-12913947)
chr5 (206-251)||(42772054-42772099)
chr5 (179-227)||(2356364-2356412)
chr5 (173-209)||(3899839-3899875)
chr5 (181-217)||(39777050-39777086)
chr5 (370-445)||(10292893-10292968)
chr5 (201-259)||(4376424-4376482)
chr5 (273-315)||(25879334-25879376)
chr5 (181-235)||(28819002-28819056)
chr5 (343-405)||(35622809-35622871)
chr5 (172-209)||(16971143-16971180)
chr5 (170-235)||(32485634-32485699)
chr5 (179-235)||(1638454-1638510)
chr5 (179-235)||(11983253-11983308)
chr5 (179-235)||(16439135-16439191)
chr5 (305-333)||(19417442-19417470)
chr5 (305-333)||(29385418-29385446)
chr5 (199-235)||(29699384-29699420)
chr5 (179-235)||(37219700-37219756)
[»] scaffold0032 (1 HSPs)
scaffold0032 (345-448)||(34189-34292)
[»] chr6 (26 HSPs)
chr6 (344-448)||(5403949-5404053)
chr6 (206-341)||(2543734-2543877)
chr6 (351-448)||(1211917-1212014)
chr6 (349-447)||(34245566-34245664)
chr6 (348-415)||(11753165-11753232)
chr6 (345-443)||(11113551-11113649)
chr6 (209-340)||(16193757-16193888)
chr6 (345-448)||(32644910-32645012)
chr6 (214-340)||(11448089-11448224)
chr6 (172-235)||(24975742-24975805)
chr6 (206-261)||(369498-369553)
chr6 (179-235)||(24587458-24587514)
chr6 (282-340)||(369519-369578)
chr6 (172-235)||(551250-551313)
chr6 (188-235)||(12343185-12343232)
chr6 (179-233)||(24618598-24618652)
chr6 (208-249)||(178660-178701)
chr6 (179-235)||(17750900-17750955)
chr6 (179-235)||(17750987-17751043)
chr6 (172-207)||(12343099-12343134)
chr6 (172-219)||(13043438-13043485)
chr6 (305-340)||(28581731-28581766)
chr6 (181-235)||(13043542-13043596)
chr6 (208-264)||(1879187-1879243)
chr6 (305-333)||(2543867-2543895)
chr6 (169-225)||(5150616-5150672)
[»] scaffold0229 (1 HSPs)
scaffold0229 (351-448)||(13079-13176)
[»] scaffold0519 (1 HSPs)
scaffold0519 (350-446)||(11195-11290)
[»] scaffold0263 (2 HSPs)
scaffold0263 (345-448)||(23172-23269)
scaffold0263 (344-398)||(23087-23141)
[»] scaffold0041 (1 HSPs)
scaffold0041 (345-448)||(73066-73170)
[»] scaffold0161 (2 HSPs)
scaffold0161 (172-235)||(27305-27368)
scaffold0161 (179-233)||(27217-27271)
[»] scaffold0586 (2 HSPs)
scaffold0586 (179-235)||(7132-7187)
scaffold0586 (185-235)||(7050-7100)
[»] scaffold0016 (2 HSPs)
scaffold0016 (179-235)||(49700-49756)
scaffold0016 (171-209)||(49805-49843)
[»] scaffold0001 (1 HSPs)
scaffold0001 (201-264)||(507735-507798)
[»] scaffold1315 (1 HSPs)
scaffold1315 (276-333)||(1819-1877)
[»] scaffold1293 (1 HSPs)
scaffold1293 (276-333)||(194-252)
[»] scaffold0343 (2 HSPs)
scaffold0343 (209-262)||(12285-12338)
scaffold0343 (305-340)||(12226-12261)
[»] scaffold0047 (1 HSPs)
scaffold0047 (174-209)||(63758-63793)
[»] scaffold0481 (1 HSPs)
scaffold0481 (181-223)||(2973-3015)
[»] scaffold0312 (1 HSPs)
scaffold0312 (199-233)||(9302-9336)


Alignment Details
Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 199 - 342
Target Start/End: Original strand, 20286921 - 20287064
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatg 298  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||       |||||||||||||||||||||||| ||    
T  20286921 ggtgacattgatgacattggccaaccacaatgtcacatgtggctttcttctttttcttttacaagacttttttgttgttttgcacacttgtaacattgtg 20287020  T
Q  299 gttgataatgtcaccaaccacaatgtcacccaagtattatccca 342  Q
    |||| |||||||||||||||||||||||||||| |||| |||||    
T  20287021 gttggtaatgtcaccaaccacaatgtcacccaaatattttccca 20287064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 206 - 340
Target Start/End: Original strand, 31342031 - 31342165
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgata 305  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||||| |||||| ||    
T  31342031 ttggtgacattggccaaccacaatgtcacatgtagctttcttctttttctttcacaagatttttttgttgttttgcacacttgtaacattgtggttggta 31342130  T
Q  306 atgtcaccaaccacaatgtcacccaagtattatcc 340  Q
    |||||||||||||||||||||||||| ||||||||    
T  31342131 atgtcaccaaccacaatgtcacccaaatattatcc 31342165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 341 - 448
Target Start/End: Original strand, 47426341 - 47426448
Alignment:
Q  341 catgggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttattt 440  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||| |||||||    
T  47426341 catgggataccacttgtgtaccattaaggtaccaatagtatataccattggccaattagagtgtgtcacctatcaatgttactttatagatgctttattt 47426440  T
Q  441 gatatatt 448  Q
    ||||||||    
T  47426441 gatatatt 47426448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 351 - 448
Target Start/End: Original strand, 50934501 - 50934598
Alignment:
Q  351 cacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||  ||||||||||||||    
T  50934501 cacttgtgtaccattaaggtaccaatggtatataccattggccaattagagtgtgccacttaccaatgttactttataaatgcattatttgatatatt 50934598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 315
Target Start/End: Original strand, 11512411 - 11512520
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgata 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||| |||||| ||    
T  11512411 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagatttttttgatgttttgcacacttgtaacattgtggttggta 11512510  T
Q  306 atgtcaccaa 315  Q
    ||||||||||    
T  11512511 atgtcaccaa 11512520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 345 - 446
Target Start/End: Original strand, 44380249 - 44380350
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    |||| |||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |||| |||||||||||||| |||||||||||    
T  44380249 ggattccacttgtgtaccattaaggtaccaatggtatatactattgaccaattatagtgtgtcacctatcaatattactttataaatgctttatttgata 44380348  T
Q  445 ta 446  Q
    ||    
T  44380349 ta 44380350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 344 - 447
Target Start/End: Original strand, 47186169 - 47186272
Alignment:
Q  344 gggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgat 443  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | |||||| ||| |||||||||||||||||||||  ||||||||||    
T  47186169 gggacaccacttgtgtaccattaaggtaccaatgttatataacattggccaataagagtgtgccacataccaatgttactttataaatactttatttgat 47186268  T
Q  444 atat 447  Q
    ||||    
T  47186269 atat 47186272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 349 - 447
Target Start/End: Complemental strand, 31187242 - 31187144
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    ||||||| ||||||||||||||||||||| |||||| ||||| ||||| | |||||| ||| |||||||||||||||||||||||||||||||||||||    
T  31187242 accacttatgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacataccaatgttactttataaatgttttatttgatatat 31187144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 349 - 447
Target Start/End: Original strand, 42664672 - 42664770
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    ||||||||||||||||||||||||||| | |||||| ||||| ||||| | |||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  42664672 accacttgtgtaccattaaggtaccaaagttatataacattgaccaataagagtgtgccacataccaatgttattttataaatgttttatttgatatat 42664770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 206 - 341
Target Start/End: Complemental strand, 22894033 - 22893890
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgat- 304  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||       ||||||||| |||||||||||||| |||||| |     
T  22894033 ttggtgacattgaccaaccacaatgtcacaagtgactttcttctttttctttaacaaga-ttttttgttgttttgtacacttgtaacattgtggttggta 22893935  T
Q  305 --------aatgtcaccaaccacaatgtcacccaagtattatccc 341  Q
            |||||||||||||||||||||||||||||||||||||    
T  22893934 atgtcaccaatgtcaccaaccacaatgtcacccaagtattatccc 22893890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 349 - 447
Target Start/End: Complemental strand, 34029463 - 34029365
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    ||||||||| ||||||||||||||||||| |||||| |||||  |||| | |||||| ||| ||| |||||||||||||||||||||||||||||||||    
T  34029463 accacttgtttaccattaaggtaccaatgttatataacattgatcaataagagtgtgccacatactaatgttactttataaatgttttatttgatatat 34029365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 343 - 418
Target Start/End: Complemental strand, 32319543 - 32319468
Alignment:
Q  343 tgggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatg 418  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  32319543 tgggattctacttgtgtaccattaaggtaccaatggtatataccattggccaattagagtgtgccacctacaaatg 32319468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 33509675 - 33509778
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    ||||| || ||||||||||||||||||| ||| ||||||| ||||| ||||||| |||||| ||||||||||| |||||||||| ||| ||||||||||     
T  33509675 ggatatcatttgtgtaccattaaggtactaatagtatatatcattgaccaattagagtgtgccacctaccaatattactttatagatgctttatttgatg 33509774  T
Q  445 tatt 448  Q
    ||||    
T  33509775 tatt 33509778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 352 - 446
Target Start/End: Complemental strand, 39498838 - 39498744
Alignment:
Q  352 acttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatata 446  Q
    |||||||||||||||| ||||||||| ||||||  ||||| |||||||||||||||||||| | |||||| ||||||||| |||||||| |||||    
T  39498838 acttgtgtaccattaaagtaccaatgatatatattattggtcaattaaagtgtgtcacctatcgatgttattttataaatattttatttaatata 39498744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 41752953 - 41753017
Alignment:
Q  171 tggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  41752953 tggaaaatacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccaca 41753017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 10179939 - 10179868
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaa 416  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| |||||| |||||| ||||||||||    
T  10179939 ggattccacttgtgtaccattaaagtaccaatggtatataccattggtcaattagagtgtgccacctaccaa 10179868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 373 - 448
Target Start/End: Original strand, 17466296 - 17466371
Alignment:
Q  373 caatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    |||||||||||| |||||| |||||| ||||||||||||| ||||||||||||||||||| |||| ||||||||||    
T  17466296 caatggtatatatcattggtcaattagagtgtgtcacctatcaatgttactttataaatgatttagttgatatatt 17466371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 30734543 - 30734489
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtca 233  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30734543 acttgggtgacatagagttaggtgacattggtgacattggccaatcacaatgtca 30734489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 35094541 - 35094646
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgt--cacctaccaatgttactttataaatgttttatttga 442  Q
    |||| ||||||  |||||||||| |||||| ||||||||||||||| | ||||| || || |  ||||||||||||||||||||||||| ||||||||||    
T  35094541 ggattccacttcagtaccattaaagtaccagtggtatataccattgactaattatagagtatgccacctaccaatgttactttataaatattttatttga 35094640  T
Q  443 tatatt 448  Q
    ||||||    
T  35094641 tatatt 35094646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 37742738 - 37742823
Alignment:
Q  363 attaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    |||||||||||||||||||||| |||||| |||||| ||| || |||||||||||||||| |||  |||| |||||||||||||||    
T  37742738 attaaggtaccaatggtatatatcattggtcaattagagtatgccacctaccaatgttacattaccaatgctttatttgatatatt 37742823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 10018742 - 10018671
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaa 416  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||||| |||| |||||||| ||||||||||    
T  10018742 ggattccacttgtgtaccattaaagtaccaatgttatataccattggtcaataaaagtgtgccacctaccaa 10018671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 51046221 - 51046163
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatg 230  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||    
T  51046221 ggaaaatacttgggtgacatagagttggatgacattggtgacattggccaatcacaatg 51046163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 1801443 - 1801499
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  1801443 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccaca 1801499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 333
Target Start/End: Original strand, 29081598 - 29081751
Alignment:
Q  181 ttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttg 280  Q
    ||||||||||| | | | |||||||| |||||||||| ||||||||||||||||| || |||||||||||| | ||||| ||          || |||||    
T  29081598 ttgggtgacattgtggttggtgacatcggtgacattgaccaaccacaatgtcacaagtagctttcttctttctttttcataaagtttttttttttttttg 29081697  T
Q  281 cacacttgtaacattatggttga-taatgtcaccaaccacaatgtcacccaagt 333  Q
     |||||||| ||||| |||||||  |||||||||||||||||| ||||||||||    
T  29081698 tacacttgtgacattgtggttgaccaatgtcaccaaccacaatatcacccaagt 29081751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 343
Target Start/End: Complemental strand, 48342927 - 48342783
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatg 298  Q
    |||||||||| ||||||| |||||| ||||||||||||||| |||||||| || ||||| |||| |       |||  |||| ||| |||| ||||| ||    
T  48342927 ggtgacattg-tgacattagccaacgacaatgtcacatgtgtctttcttcattctcttttacaatatttttttgtttctttgtacatttgtgacattgtg 48342829  T
Q  299 gttgat-aatgtcaccaaccacaatgtcacccaagtattatcccat 343  Q
    |||||  |||||| ||||||| ||||||||||||||||||||||||    
T  48342828 gttgaccaatgtcgccaaccataatgtcacccaagtattatcccat 48342783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 43139857 - 43139794
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||  |||||| ||||    
T  43139857 ggaaaatatttgggtgacatagagttgggtgacattggtgacattggccaataacaatgccaca 43139794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 47492195 - 47492132
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||| ||||||||||||||||| |||||||||||| | ||||||||| ||||||||||||    
T  47492195 ggaaaatagttgggtgacatagagttgggtgacattggtcatattggccaatcacaatgtcaca 47492132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 41753105 - 41753049
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||  ||||||||||||||||||||||| ||||||| ||||    
T  41753105 acttgggtgacatagagttgagtgacattggtgacattggccaatcacaatgccaca 41753049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 32385489 - 32385358
Alignment:
Q  209 gtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgat-aat 307  Q
    |||| |||||||||||||||||| | | |||  |||||||||| |||||||||| |       |||  |||| |||||||| ||||| |||||||  |||    
T  32385489 gtgatattggccaaccacaatgttaaaagtgtttttcttctttctctttcacaatatttatttgtttatttgtacacttgtcacattgtggttgaccaat 32385390  T
Q  308 gtcaccaaccacaatgtcacccaagtattatc 339  Q
    |||||||| ||||||||||||||| |||||||    
T  32385389 gtcaccaatcacaatgtcacccaaatattatc 32385358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 45103106 - 45103162
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| |||||||||||||| ||||  ||| ||||||||||||    
T  45103106 acttgggtgacatagagttgggtgacattggtgatattgatcaatcacaatgtcaca 45103162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 7977640 - 7977585
Alignment:
Q  180 cttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||| || | |||||||| ||| ||||||||||||||||||||||    
T  7977640 cttgggtgacatagaatttgatgacattgatgatattggccaaccacaatgtcaca 7977585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 10123282 - 10123211
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaa 416  Q
    |||| |||||||||||||||||| ||| ||||| |||||| || ||| |||| |||||||| ||||||||||    
T  10123282 ggattccacttgtgtaccattaaagtatcaatgttatatatcaatggtcaataaaagtgtgccacctaccaa 10123211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 48342214 - 48342296
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaa 262  Q
    ||||||||||||| | | | |||||||||| ||||||| ||||||||||||| |||||||| |||||||| || ||||| ||||    
T  48342214 acttgggtgacattgtggttggtgacattg-tgacattagccaaccacaatgccacatgtgtctttcttcattctcttttacaa 48342296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 55223229 - 55223279
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaat 229  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||| ||||||    
T  55223229 acttgtgtgacatagagttaggtgacattggtgatattggtcaatcacaat 55223279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 1801634 - 1801597
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattgg 209  Q
    |||||||||||||||||||||||||| |||||||||||    
T  1801634 ggaaaatacttgggtgacatagagttgggtgacattgg 1801597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 11512519 - 11512555
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagtattatccc 341  Q
    |||||||||||||| ||||||||||||||||||||||    
T  11512519 aatgtcaccaaccataatgtcacccaagtattatccc 11512555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 18321648 - 18321704
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||  |||||||||| ||||| |||||||||||||| ||| ||||||||||||    
T  18321648 acttgggcaacatagagttgggtgatattggtgacattggtcaatcacaatgtcaca 18321704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 30734399 - 30734455
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||| ||||||||||||| |||||||||| |||||||| || | ||||||||||||    
T  30734399 acttgtgtgacatagagtttggtgacattgatgacattgaccgatcacaatgtcaca 30734455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 33689173 - 33689229
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||| ||||||||||||| |||||||||| ||| ||||| ||| ||||||||||||    
T  33689173 acttgtgtgacatagagttgggtgacattgatgatattggtcaatcacaatgtcaca 33689229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 47492064 - 47492100
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||| ||||||||||||    
T  47492064 ggtgacattggtgacattggccaatcacaatgtcaca 47492100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 22894000 - 22894051
Alignment:
Q  283 cacttgtaacattatggttgat-aatgtcaccaaccacaatgtcacccaagt 333  Q
    ||||||| ||||| |||||| | |||||||||||||||||||||||||||||    
T  22894000 cacttgtgacattgtggttggtcaatgtcaccaaccacaatgtcacccaagt 22894051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 408
Target Start/End: Original strand, 34955072 - 34955131
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtca 408  Q
    |||||||||||||||||  | |||||||| |||||| ||||||||||| || ||||||||    
T  34955072 accacttgtgtaccattgggataccaatgttatataacattggccaatgaaggtgtgtca 34955131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 39057089 - 39057043
Alignment:
Q  188 acatagagttaggtgacattggtgacattggccaaccacaatgtcac 234  Q
    |||||||||||||||||||||||||||| || |||  ||||||||||    
T  39057089 acatagagttaggtgacattggtgacatcggacaatgacaatgtcac 39057043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 39430046 - 39429996
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaat 229  Q
    ||||| |||||||| |||| ||||||||| |||||||||||||| ||||||    
T  39430046 acttgagtgacataaagttgggtgacattagtgacattggccaagcacaat 39429996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 49159539 - 49159493
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaacca 225  Q
    ||||||||||||| | | | |||||||||||||||||||||||||||    
T  49159539 acttgggtgacattgtggttggtgacattggtgacattggccaacca 49159493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 1272590 - 1272557
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtga 212  Q
    ||||||||||||||||||| ||||||||||||||    
T  1272590 acttgggtgacatagagttgggtgacattggtga 1272557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 16205736 - 16205777
Alignment:
Q  209 gtgacattggccaaccacaatgtcacatgtggctttcttctt 250  Q
    |||||||||  |||||||||||||||| ||||||||||||||    
T  16205736 gtgacattgatcaaccacaatgtcacaagtggctttcttctt 16205777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 20496609 - 20496553
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaag 263  Q
    |||||||||||| | ||||||||||||||| ||| ||||||||| | |||||||||||    
T  20496609 ttggtgacattgtc-aaccacaatgtcacacgtgactttcttctctctctttcacaag 20496553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 30580890 - 30580841
Alignment:
Q  186 tgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||| || ||||||||| |||||||||| ||| ||||||||||||    
T  30580890 tgacatagaattgggtgacatttgtgacattggtcaatcacaatgtcaca 30580841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 405
Target Start/End: Original strand, 42273328 - 42273389
Alignment:
Q  344 gggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtg 405  Q
    |||| |||||||||||||||||  | |||||||| |||||| |||||| |||| ||||||||    
T  42273328 gggacaccacttgtgtaccattgggataccaatgttatataacattggtcaatgaaagtgtg 42273389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 405
Target Start/End: Complemental strand, 46489832 - 46489771
Alignment:
Q  344 gggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtg 405  Q
    |||| |||||||||||||||||  | |||||||| |||||| |||||| |||| ||||||||    
T  46489832 gggacaccacttgtgtaccattgggataccaatgttatataacattggtcaatgaaagtgtg 46489771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 333
Target Start/End: Complemental strand, 11512421 - 11512393
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagt 333  Q
    |||||||||||||||||||||||||||||    
T  11512421 aatgtcaccaaccacaatgtcacccaagt 11512393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 17546997 - 17547037
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttct 246  Q
    ||||||| |||||||||||| ||||||||| ||||||||||    
T  17546997 ttggtgatattggccaaccataatgtcacaagtggctttct 17547037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 30580753 - 30580809
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||| |||||||||| || |||||||||||||| |||| |||| || |||||||||    
T  30580753 acttgagtgacatagaattgggtgacattggtgatattgaccaatcataatgtcaca 30580809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 36738285 - 36738341
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaa 262  Q
    ||||||| ||||| |||||||||| ||||| ||| ||||||||||| | ||||||||    
T  36738285 ttggtgatattggtcaaccacaatatcacaagtgtctttcttctttctttttcacaa 36738341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 36738385 - 36738421
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagtattatccc 341  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  36738385 aatgtcaccaaccacaatgtcacccaaatattttccc 36738421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 333
Target Start/End: Complemental strand, 48342242 - 48342214
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagt 333  Q
    |||||||||||||||||||||||||||||    
T  48342242 aatgtcaccaaccacaatgtcacccaagt 48342214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 333
Target Start/End: Original strand, 49159511 - 49159539
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagt 333  Q
    |||||||||||||||||||||||||||||    
T  49159511 aatgtcaccaaccacaatgtcacccaagt 49159539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 50524843 - 50524791
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgt 231  Q
    |||||||||||||||||||  ||||||||||||| ||| | ||| ||||||||    
T  50524843 acttgggtgacatagagttgagtgacattggtgatattagtcaatcacaatgt 50524791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 6e-44; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 210 - 340
Target Start/End: Complemental strand, 15928204 - 15928073
Alignment:
Q  210 tgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnn-gttgttttgcacacttgtaacattatggttgataatg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| |||||||||||||| ||||||||||||    
T  15928204 tgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagatttttgttgttgttttgtacacttgtaacattgtggttgataatg 15928105  T
Q  309 tcaccaaccacaatgtcacccaagtattatcc 340  Q
    ||||||| ||||||||||||||||||||||||    
T  15928104 tcaccaatcacaatgtcacccaagtattatcc 15928073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 179 - 312
Target Start/End: Original strand, 9884838 - 9884971
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttt 278  Q
    |||| |||||||||| | | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  9884838 actttggtgacatagtggttggtgacattggtgacattggtcaaccacaatgtcacatgtggctttcttctttttctttcacaagatttttttgttgttt 9884937  T
Q  279 tgcacacttgtaacattatggttgataatgtcac 312  Q
    ||||||||||||||||| ||||||||||||||||    
T  9884938 tgcacacttgtaacattgtggttgataatgtcac 9884971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 206 - 340
Target Start/End: Original strand, 50754748 - 50754891
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgat- 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       |||||||||||||||||||||||| ||||||||     
T  50754748 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttcttttacaagatttttttgttgttttgcacacttgtaacattgtggttgata 50754847  T
Q  305 --------aatgtcaccaaccacaatgtcacccaagtattatcc 340  Q
            ||||||||||||||||||||||||||||||||||||    
T  50754848 atgtcaccaatgtcaccaaccacaatgtcacccaagtattatcc 50754891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 199 - 340
Target Start/End: Original strand, 9379835 - 9379985
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatg 298  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||| ||    
T  9379835 ggtgacattggtgatattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagatttttttgttgttttgcacacttgtaacattgtg 9379934  T
Q  299 gttgat---------aatgtcaccaaccacaatgtcacccaagtattatcc 340  Q
    |||| |         ||||||||||||||||||||||||||| ||||||||    
T  9379935 gttggtaatgttaccaatgtcaccaaccacaatgtcacccaaatattatcc 9379985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 29119500 - 29119397
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| || |||||||||||| ||| |||||||||||    
T  29119500 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattagagtgtgccacctatcattgttactttatagatgctttatttgata 29119401  T
Q  445 tatt 448  Q
    ||||    
T  29119400 tatt 29119397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 32676131 - 32676234
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||   |||||||||||||||||||||||||| |||||||||||    
T  32676131 ggattccacttgtgtaccattaaggtaccaatggtatataccattggccaattagaatgcaccacctaccaatgttactttataaatgctttatttgata 32676230  T
Q  445 tatt 448  Q
    ||||    
T  32676231 tatt 32676234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 343 - 447
Target Start/End: Complemental strand, 8809818 - 8809714
Alignment:
Q  343 tgggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttga 442  Q
    ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| | |||||| ||| ||||||||||||||||||||||||||||||||    
T  8809818 tgggacaccacttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacgtaccaatgttactttataaatgttttatttga 8809719  T
Q  443 tatat 447  Q
    |||||    
T  8809718 tatat 8809714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 206 - 315
Target Start/End: Complemental strand, 28739447 - 28739338
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgata 305  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||       ||| |||||||||||||||||||| |||||| ||    
T  28739447 ttggtgacattggccaaccacaatgtcacatgtggcttttttctttttcttttacaagatttttttgttattttgcacacttgtaacattgtggttggta 28739348  T
Q  306 atgtcaccaa 315  Q
    ||||||||||    
T  28739347 atgtcaccaa 28739338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 344 - 443
Target Start/End: Original strand, 25161303 - 25161402
Alignment:
Q  344 gggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgat 443  Q
    ||||| |||||||||||||||||| ||  |||||||||||||||||| ||||||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  25161303 gggattccacttgtgtaccattaaagtctcaatggtatataccattgaccaattacagtgtgccacctaacaatgttactttataaatgttttatttgat 25161402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 350 - 448
Target Start/End: Original strand, 2569037 - 2569135
Alignment:
Q  350 ccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||| |||||| |||||||||||||||| |||  |||| |||||||||||||||    
T  2569037 ccacttgtgtaccattaaggtaccaatggtatatatcatttgccaattagagtgtgccacctaccaatgttacattaccaatgctttatttgatatatt 2569135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 179 - 302
Target Start/End: Complemental strand, 6539720 - 6539597
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttt 278  Q
    ||||||||||||| | | | | ||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||       |||||||    
T  6539720 acttgggtgacattgtggttgatgatattggtgacattggtcaaccacaatgtcacatgtgactttcttctttttctttcacaagacttttttgttgttt 6539621  T
Q  279 tgcacacttgtaacattatggttg 302  Q
    ||||||||||||||||| ||||||    
T  6539620 tgcacacttgtaacattgtggttg 6539597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 37155036 - 37155099
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  37155036 ggaaaatacttgggtgacatagagtttggtgacattggtgacattggccaatcacaatgtcaca 37155099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 446
Target Start/End: Original strand, 8462123 - 8462224
Alignment:
Q  344 gggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgat 443  Q
    ||||| |||||||||||  ||||| |||||||||||||||| |||||  |||||| |||||| ||||||||||||||| |||||||||||||||||| ||    
T  8462123 gggattccacttgtgtat-attaaagtaccaatggtatatatcattgatcaattatagtgtgccacctaccaatgttattttataaatgttttatttaat 8462221  T
Q  444 ata 446  Q
    |||    
T  8462222 ata 8462224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 341
Target Start/End: Complemental strand, 10449588 - 10449446
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatg 298  Q
    |||||||||| ||||||||| ||||||||||||||||  |  ||||||||||| |||||||||| |       |||  |||| |||||||| ||||| ||    
T  10449588 ggtgacattg-tgacattggtcaaccacaatgtcacaaatatctttcttctttctctttcacaatatttttttgtttctttgtacacttgtgacattgtg 10449490  T
Q  299 gttgat-aatgtcaccaaccacaatgtcacccaagtattatccc 341  Q
    |||| | |||||||||||||||||||||||||||||||||||||    
T  10449489 gttggtcaatgtcaccaaccacaatgtcacccaagtattatccc 10449446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 46435629 - 46435563
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacct 411  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||    
T  46435629 ggataccacttgtgtaccattaaggtaccaatggtatatacaattggccaattagagtgcgtcacct 46435563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 29179745 - 29179682
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  29179745 ggaaaatacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccaca 29179682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 46931987 - 46932050
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  46931987 ggaaaatacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccaca 46932050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 48994069 - 48994002
Alignment:
Q  168 atatggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||    
T  48994069 atatggaaaatacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgccaca 48994002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 214 - 341
Target Start/End: Original strand, 28045350 - 28045487
Alignment:
Q  214 attggccaaccacaatgtcacatgtggctttcttctttttctttcacaaga-nnnnnnngttgttttgcacacttgtaacattatggttgat-------- 304  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||         |||||||| |||||||||||||| |||||| |            
T  28045350 attggccaaccataatgtcacaagtggctttcttctttttctttaacaagattttcttttttgttttgtacacttgtaacattgtggttggtaatgtcac 28045449  T
Q  305 -aatgtcaccaaccacaatgtcacccaagtattatccc 341  Q
     |||||||||||||||||||||||||||||||||||||    
T  28045450 caatgtcaccaaccacaatgtcacccaagtattatccc 28045487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 44706932 - 44706874
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatg 230  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  44706932 ggaaaatatttgggtgacatagagttgggtgacattggtgacattggccaatcacaatg 44706874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 351 - 448
Target Start/End: Original strand, 6223052 - 6223149
Alignment:
Q  351 cacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    ||||||||||||||||| ||| ||||| |||||| |||||  ||||||| ||||||||  || |||||||| ||||||| | ||||||||||||||||    
T  6223052 cacttgtgtaccattaaagtatcaatgttatatatcattgatcaattaaggtgtgtcatatatcaatgttattttataagtattttatttgatatatt 6223149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 48993914 - 48993970
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  48993914 acttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcaca 48993970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 5995359 - 5995422
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||||||| ||||||| ||||    
T  5995359 ggaaaatacttgggtgacatagagtttgatgacattggtaacattggccaatcacaatgccaca 5995422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 447
Target Start/End: Original strand, 35998251 - 35998349
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    ||||||||| ||||||||||||||||||| |||||| |||||   ||| | |||||| ||| || |||||||| ||||||| |||||||||| ||||||    
T  35998251 accacttgtataccattaaggtaccaatgttatataacattgattaataagagtgtgccacatatcaatgttattttataagtgttttattttatatat 35998349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 431
Target Start/End: Complemental strand, 7214578 - 7214501
Alignment:
Q  354 ttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaat 431  Q
    ||||||||||||||||||| ||| |||||||  ||||| |||||| ||||||||||||| | || |||||||||||||    
T  7214578 ttgtgtaccattaaggtactaatagtatatattattggtcaattagagtgtgtcacctatcgatattactttataaat 7214501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 36290549 - 36290492
Alignment:
Q  178 tacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||| ||||||||||||| ||||| |||| ||||||||||||    
T  36290549 tacttgggtgacatagagttgggtgacattggtggcattgaccaatcacaatgtcaca 36290492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 44938955 - 44938794
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttt 278  Q
    ||||||||||||| | | |  |||||||| |||||||||  |||||||||||  ||| ||||||||||||||| |||||||||| |         | |||    
T  44938955 acttgggtgacattgtgattagtgacattagtgacattgaacaaccacaatggtacaagtggctttcttctttctctttcacaa-agttttttaattttt 44938857  T
Q  279 tgcacacttgtaacattatggttgat-aatgtcaccaaccacaatgtcacccaagtattatcc 340  Q
    || |||||||| ||||| |||||| | |||||||| |||||||||||||||||||| ||||||    
T  44938856 tgtacacttgtgacattctggttggtcaatgtcactaaccacaatgtcacccaagtgttatcc 44938794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 392 - 448
Target Start/End: Original strand, 8555471 - 8555527
Alignment:
Q  392 ccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  8555471 ccaattaaaatgtgtcacataccaatgttattttataaatgttttatttgatgtatt 8555527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 442
Target Start/End: Complemental strand, 3688980 - 3688917
Alignment:
Q  379 tatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttga 442  Q
    |||||| ||||| ||||||| |||||   |||||||||||||||||||||||||||||||||||    
T  3688980 tatatatcattgaccaattagagtgtacaacctaccaatgttactttataaatgttttatttga 3688917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 15220950 - 15220896
Alignment:
Q  181 ttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||||| |||||    
T  15220950 ttgggtgacatagagttgggtgacattggtgatattggccaatcacaatctcaca 15220896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 48498405 - 48498451
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattgg 218  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  48498405 ggaaaatacttgggtgacatagagttgggtgacatttgtgacattgg 48498451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 1091685 - 1091629
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| ||||| ||||||||| ||| |||| ||||||||||||    
T  1091685 acttgggtgacatagagttgggtgatattggtgactttgaccaatcacaatgtcaca 1091629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 5995510 - 5995454
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| | ||||||||||||||||| |||| ||||||| ||||    
T  5995510 acttgggtgacatagagttggatgacattggtgacattgaccaatcacaatgccaca 5995454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 9157307 - 9157363
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||| ||||||||||||| |||||||||||| |||||| |||| ||||||||||||    
T  9157307 acttgtgtgacatagagttgggtgacattggtaacattgaccaatcacaatgtcaca 9157363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 17127561 - 17127617
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||| |||| |||||||||||||||||| ||||||||| |||| ||||||||||||    
T  17127561 acttgtgtgatatagagttaggtgacattagtgacattgaccaatcacaatgtcaca 17127617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 17127705 - 17127649
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||| |||||||||||||||||| ||||||||| |||| || |||||||||    
T  17127705 acttgggtgatatagagttaggtgacattagtgacattgaccaatcaaaatgtcaca 17127649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 21630039 - 21630095
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||| |||||||| |||| ||||||||||||||||||| |||| ||||||||||||    
T  21630039 acttgcgtgacataaagttgggtgacattggtgacattgaccaatcacaatgtcaca 21630095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 29179594 - 29179650
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||| |||||||||||| |||||||||||||||| || |||| ||||||||||||    
T  29179594 acttggatgacatagagttgggtgacattggtgacactgaccaatcacaatgtcaca 29179650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 29371509 - 29371453
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||| ||||||||||| |||||||||||||||| |||| |||| ||||||||||||    
T  29371509 acttgtgtgacatagagctaggtgacattggtgatattgaccaatcacaatgtcaca 29371453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 46932122 - 46932067
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||    
T  46932122 acttgggtgacatagagtt-ggtgacattggtgacattgaccaatcacaatgccaca 46932067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 31342260 - 31342315
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcac 234  Q
    ||||||||||||||||||| |||||||  | ||||||||||||| |||||||||||    
T  31342260 acttgggtgacatagagttgggtgacaccgatgacattggccaatcacaatgtcac 31342315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 4579191 - 4579229
Alignment:
Q  205 attggtgacattggccaaccacaatgtcacatgtggctt 243  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  4579191 attggtgacattggccaaccacaatgtcacaagtggctt 4579229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 28395636 - 28395690
Alignment:
Q  181 ttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||| ||||||||||  |||||||||||||||||| |||| ||||||||||||    
T  28395636 ttgggtaacatagagttgagtgacattggtgacattgaccaatcacaatgtcaca 28395690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 32540755 - 32540801
Alignment:
Q  189 catagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  32540755 catagagttgggtgacattggtggcattggccaatcacaatgtcaca 32540801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 33734213 - 33734282
Alignment:
Q  194 agttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaag 263  Q
    |||| ||||||||||||||||||||||||||||||| | ||| |||||| | || | | |||||||||||    
T  33734213 agttgggtgacattggtgacattggccaaccacaatattacaagtggctattttttctctctttcacaag 33734282  T

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Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 49445050 - 49445013
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattgg 209  Q
    |||||||||||||||||||||||||| |||||||||||    
T  49445050 ggaaaatacttgggtgacatagagttgggtgacattgg 49445013  T

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Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 719008 - 719060
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttcttt 251  Q
    ||||||||||| | |||||| |||||||||||||||| |||||||| ||||||    
T  719008 ggtgacattggcggcattggacaaccacaatgtcacaagtggcttttttcttt 719060  T

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Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 8337990 - 8337954
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattg 208  Q
    |||||||||||||||||||||||||| ||||||||||    
T  8337990 ggaaaatacttgggtgacatagagttgggtgacattg 8337954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 16679873 - 16679829
Alignment:
Q  346 gataccacttgtgtaccattaaggtaccaatggtatataccattg 390  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||    
T  16679873 gatagcacttgtgtaccattaaggtaccaatgttatatactattg 16679829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 26011783 - 26011735
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtcacatgtggctttctt 247  Q
    ||||||||||||||||||| ||||||||||| | ||| |||||||||||    
T  26011783 ggtgacattggtgacattgaccaaccacaatataacaagtggctttctt 26011735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 32540889 - 32540837
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgt 231  Q
    |||||||||||||||| || | ||||||||||||||||| |||| ||||||||    
T  32540889 acttgggtgacatagaattggatgacattggtgacattgaccaatcacaatgt 32540837  T

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Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 49444910 - 49444946
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacat 215  Q
    ||||||||||||||||||| |||||||||||||||||    
T  49444910 acttgggtgacatagagttgggtgacattggtgacat 49444946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 12441105 - 12441042
Alignment:
Q  170 atggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtca 233  Q
    ||||| || |||||| ||||||||| || ||||||||||||| ||||||| || ||||||||||    
T  12441105 atggataacacttggatgacatagaatttggtgacattggtggcattggctaatcacaatgtca 12441042  T

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Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 36381589 - 36381644
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcac 234  Q
    |||||| ||||||||| || | ||| |||||||||||||||||| |||||||||||    
T  36381589 acttggatgacatagaattcgatgatattggtgacattggccaatcacaatgtcac 36381644  T

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Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 41526193 - 41526228
Alignment:
Q  227 aatgtcacatgtggctttcttctttttctttcacaa 262  Q
    |||||||||||| |||||||||||||||||||||||    
T  41526193 aatgtcacatgttgctttcttctttttctttcacaa 41526228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 421269 - 421235
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtca 233  Q
    ||||||||||| |||||||||||||||||||||||    
T  421269 ggtgacattggcgacattggccaaccacaatgtca 421235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 33219714 - 33219660
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtca 233  Q
    |||||||| |||||||||| | |||||||||||||||||  ||| ||||||||||    
T  33219714 acttgggtaacatagagttggatgacattggtgacattgatcaatcacaatgtca 33219660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Complemental strand, 34026781 - 34026751
Alignment:
Q  311 accaaccacaatgtcacccaagtattatccc 341  Q
    |||||||||||||||||||||||||||||||    
T  34026781 accaaccacaatgtcacccaagtattatccc 34026751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 28739335 - 28739302
Alignment:
Q  309 tcaccaaccacaatgtcacccaagtattatccca 342  Q
    |||||||||||||| |||||||||||||||||||    
T  28739335 tcaccaaccacaatatcacccaagtattatccca 28739302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 34062208 - 34062245
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattgg 209  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  34062208 ggaaaatatttgggtgacatagagttgggtgacattgg 34062245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 208
Target Start/End: Complemental strand, 44183467 - 44183438
Alignment:
Q  179 acttgggtgacatagagttaggtgacattg 208  Q
    ||||||||||||||||||||||||||||||    
T  44183467 acttgggtgacatagagttaggtgacattg 44183438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 9884973 - 9885009
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagtattatccc 341  Q
    |||||||||||||||||| |||||||||||| |||||    
T  9884973 aatgtcaccaaccacaatatcacccaagtatcatccc 9885009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 18056196 - 18056140
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtg 405  Q
    |||||||||||||||||||  |||||||| ||||||  |||| ||||| ||||||||    
T  18056196 accacttgtgtaccattaaactaccaatgttatataatattgaccaatgaaagtgtg 18056140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 333
Target Start/End: Original strand, 28739437 - 28739465
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagt 333  Q
    |||||||||||||||||||||||||||||    
T  28739437 aatgtcaccaaccacaatgtcacccaagt 28739465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 209
Target Start/End: Original strand, 29371376 - 29371404
Alignment:
Q  181 ttgggtgacatagagttaggtgacattgg 209  Q
    |||||||||||||||||||||||||||||    
T  29371376 ttgggtgacatagagttaggtgacattgg 29371404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 409
Target Start/End: Complemental strand, 42239262 - 42239198
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcac 409  Q
    ||||| ||||| ||||| ||| || |||||||| |||||| |||| | |||||||||||||||||    
T  42239262 ggatatcacttctgtactattgagttaccaatgttatataacattagtcaattaaagtgtgtcac 42239198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 44381939 - 44381907
Alignment:
Q  309 tcaccaaccacaatgtcacccaagtattatccc 341  Q
    ||||||||||||||||||||||| |||||||||    
T  44381939 tcaccaaccacaatgtcacccaaatattatccc 44381907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 47557276 - 47557344
Alignment:
Q  196 ttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaaga 264  Q
    |||||||| || |||||||||| ||||||||||||| ||| ||| |||| || ||| ||||||| ||||    
T  47557276 ttaggtgatataggtgacattgtccaaccacaatgttacaagtgacttttttttttctctttcataaga 47557344  T

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Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 179 - 340
Target Start/End: Original strand, 39819060 - 39819230
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttt 278  Q
    ||||||||||||| | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  39819060 acttgggtgacattgtggttggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagatttttttgttgttt 39819159  T
Q  279 tgcacacttgtaacattatggttgat---------aatgtcaccaaccacaatgtcacccaagtattatcc 340  Q
    ||||||||||||| ||| |||||| |         ||||||||||||||||||||||||||||||||||||    
T  39819160 tgcacacttgtaatattgtggttggtaatgtcaccaatgtcaccaaccacaatgtcacccaagtattatcc 39819230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 345 - 446
Target Start/End: Original strand, 21603954 - 21604055
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  21603954 ggattccacttgtgtaccattaaggtaccaatggtatataccattgaccaattatagtgtatcacctaccaatgttactttataaatgttttatttgata 21604053  T
Q  445 ta 446  Q
    ||    
T  21604054 ta 21604055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 206 - 343
Target Start/End: Original strand, 7755360 - 7755497
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgata 305  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||       ||||||||| |||||||||||||| || ||| ||    
T  7755360 ttggtgacattggccaaccacaatgtcacaagtggcttttttctttttctttaacaagatttttttgttgttttgtacacttgtaacattgtgattggta 7755459  T
Q  306 atgtcaccaaccacaatgtcacccaagtattatcccat 343  Q
    |||||||||||||||||||||||||| |||||||||||    
T  7755460 atgtcaccaaccacaatgtcacccaaatattatcccat 7755497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 34392257 - 34392154
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||||||||    
T  34392257 ggattccacttgtgtaccattgaggtaccaatggtatataccattggccaattagagtgtgccacctaccaatcttactttataaatgctttatttgata 34392158  T
Q  445 tatt 448  Q
    ||||    
T  34392157 tatt 34392154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 201 - 340
Target Start/End: Original strand, 12918552 - 12918700
Alignment:
Q  201 tgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggt 300  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||       ||||||||||||| |||||||||| ||||    
T  12918552 tgacattggtgacattggccaaccacaatgtcacatgtggcttttttctttttctttcataagacttttttgttgttttgcacatttgtaacattgtggt 12918651  T
Q  301 tgat---------aatgtcaccaaccacaatgtcacccaagtattatcc 340  Q
    || |         ||||||||||||||||||||||||||||||||||||    
T  12918652 tggtaatgtcaccaatgtcaccaaccacaatgtcacccaagtattatcc 12918700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 353 - 448
Target Start/End: Original strand, 7381695 - 7381790
Alignment:
Q  353 cttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||| || ||||||||||||||||||||||  |||||||||||||||    
T  7381695 cttgtgtaccattaaggtaccaatggtatatactattggccaattagagtgtgccatctaccaatgttactttataaattctttatttgatatatt 7381790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 345 - 445
Target Start/End: Complemental strand, 37358097 - 37357997
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||| | ||||| ||||||||||||| ||||||||||||||||||| ||||||| |||    
T  37358097 ggattccacttgtgtatcattaaggtaccaatgatatataccattgactaattagagtgtgtcacctatcaatgttactttataaatgctttatttaata 37357998  T
Q  445 t 445  Q
    |    
T  37357997 t 37357997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 15562232 - 15562337
Alignment:
Q  210 tgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgataatgt 309  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||  ||       |||||||||||||||||||||||| || ||| ||||||    
T  15562232 tgacattggccaaccacaatgtcacatgtgactttcttcttttttattcactggatttttttgttgttttgcacacttgtaacattgtgattggtaatgt 15562331  T
Q  310 caccaa 315  Q
    ||||||    
T  15562332 caccaa 15562337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 364 - 447
Target Start/End: Complemental strand, 23863958 - 23863877
Alignment:
Q  364 ttaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    ||||||||||||||||||||   ||||| |||||| |||||| |||||||||||||||||||||||||| ||||||||||||||    
T  23863958 ttaaggtaccaatggtatatt--attggtcaattagagtgtgccacctaccaatgttactttataaatgctttatttgatatat 23863877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 29508840 - 29508781
Alignment:
Q  171 tggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatg 230  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||    
T  29508840 tggaaaatacttgggtgacatagagttgggtgatattggtgacattggccaatcacaatg 29508781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 16514414 - 16514464
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaa 222  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16514414 ggaaaatacttgggtgacatagagttgggtgacattggtgacattggccaa 16514464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 348 - 448
Target Start/End: Original strand, 4775632 - 4775733
Alignment:
Q  348 taccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttacttta-taaatgttttatttgatata 446  Q
    |||||||| |||||||||||| |||||||| ||||||  |||||||||||| | ||| ||| |||||||| |||||||| ||| |||||||||| |||||    
T  4775632 taccacttatgtaccattaagctaccaatgatatatattattggccaattagaatgtctcatctaccaatcttactttattaattgttttatttaatata 4775731  T
Q  447 tt 448  Q
    ||    
T  4775732 tt 4775733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 30610317 - 30610238
Alignment:
Q  178 tacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttc 258  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||| ||||||||||||| |||| |||| | ||||||    
T  30610317 tacttgggtgacatagaatt-ggtggcattggtgacattggccaaccataatgtcacatgtgacttttttctgtctctttc 30610238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 32545783 - 32545839
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  32545783 acttaggtgacatagagttaggtgacattggtgacattggtcaaccacgatgtcaca 32545839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 6217222 - 6217277
Alignment:
Q  180 cttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  6217222 cttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccaca 6217277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 37632979 - 37633025
Alignment:
Q  170 atggaaaatacttgggtgacatagagttaggtgacattggtgacatt 216  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  37632979 atggaaaatacttgggtgacatagagtttggtgacattggtgacatt 37633025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 9173131 - 9173066
Alignment:
Q  170 atggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||| || |||||||||||||| |||||||||||||| ||||||||| ||||||| ||||    
T  9173131 atggaaaatatttaggtgacatagagttgggtgacattggtgatattggccaatcacaatgccaca 9173066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 16514565 - 16514509
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| ||||| ||||||||||||| |||| ||||||||||||    
T  16514565 acttgggtgacatagagttgggtgagattggtgacattgaccaatcacaatgtcaca 16514509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 32545929 - 32545873
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||  ||||||||||||||||||||||| || |||||||||    
T  32545929 acttgggtgacatagagtttagtgacattggtgacattggccaatcataatgtcaca 32545873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 38933728 - 38933672
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| || |||||||||    
T  38933728 acttgggtgacatagagttgggtgacattggtgacgttggccaatcataatgtcaca 38933672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 14229355 - 14229406
Alignment:
Q  184 ggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  14229355 ggtgacatagagttcggtgacattggtgacattggtcaatcacaatgtcaca 14229406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 6722092 - 6722036
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| | ||||||| |||| ||||||||| ||||||||||||    
T  6722092 acttgggtgacatagagttggttgacattagtgatattggccaatcacaatgtcaca 6722036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 14470589 - 14470641
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgt 231  Q
    ||||| ||||||||||||| ||||||||||||||||||| |||| ||||||||    
T  14470589 acttgtgtgacatagagttgggtgacattggtgacattgaccaatcacaatgt 14470641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 448
Target Start/End: Original strand, 4779608 - 4779683
Alignment:
Q  373 caatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    |||| |||||||||||||  || ||| |||||| | |||| ||||||||||||||||||  |||||||||||||||    
T  4779608 caatagtatataccattgatcacttatagtgtgccgcctaacaatgttactttataaatactttatttgatatatt 4779683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 381 - 444
Target Start/End: Complemental strand, 41095926 - 41095863
Alignment:
Q  381 tataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    ||||| ||||| |||||| ||||   |||||||||||||||||||||||||| |||||||||||    
T  41095926 tatacaattggtcaattagagtgcaccacctaccaatgttactttataaatgctttatttgata 41095863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 260
Target Start/End: Original strand, 5913522 - 5913602
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcac 260  Q
    ||||||||||||| | | | |||||||||| |||||||||||||||||||| | |||  || ||||||||||| ||||||||    
T  5913522 acttgggtgacattgtggttggtgacattg-tgacattggccaaccacaatcttacaaatgtctttcttctttctctttcac 5913602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 6217363 - 6217326
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattgg 209  Q
    |||||||||||||||||||||||||| |||||||||||    
T  6217363 ggaaaatacttgggtgacatagagttgggtgacattgg 6217326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 29508687 - 29508736
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaa 228  Q
    |||| |||||||||||||| ||||||||||||||||||| |||| |||||    
T  29508687 acttaggtgacatagagttgggtgacattggtgacattgaccaatcacaa 29508736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 33018679 - 33018630
Alignment:
Q  186 tgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||| |||||||||||||| ||||| ||| ||||||||||||    
T  33018679 tgacatagagttgggtgacattggtgatattggtcaatcacaatgtcaca 33018630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 1992235 - 1992271
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattg 208  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1992235 ggaaaatacttggatgacatagagttaggtgacattg 1992271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 5095854 - 5095818
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||| |||||||||||||||||||||||||||||||    
T  5095854 ggtgatattggtgacattggccaaccacaatgtcaca 5095818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 13421823 - 13421718
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgata 305  Q
    |||||||||||| |||||||||| || ||||||| ||||||| ||||||||| || |||       ||||||||  ||| ||| ||||||||  ||||||    
T  13421823 ttggtgacattgaccaaccacaacgttacatgtgactttcttttttttcttttacgagatttttttgttgttttatacatttgaaacattataattgata 13421724  T
Q  306 atgtca 311  Q
    ||||||    
T  13421723 atgtca 13421718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 18182631 - 18182591
Alignment:
Q  209 gtgacattggccaaccacaatgtcacatgtggctttcttct 249  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  18182631 gtgacattggcaaaccacaatgtcacaagtggctttcttct 18182591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 37811090 - 37811146
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtg 405  Q
    |||||||||||||||||  | |||||||| |||||| ||||||||||| ||||||||    
T  37811090 accacttgtgtaccattgggataccaatgttatataacattggccaatgaaagtgtg 37811146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 5913550 - 5913512
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagtattatcccat 343  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  5913550 aatgtcaccaaccacaatgtcacccaagtgttaccccat 5913512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 9172984 - 9173018
Alignment:
Q  176 aatacttgggtgacatagagttaggtgacattggt 210  Q
    |||||||||||||||||||||| ||||||||||||    
T  9172984 aatacttgggtgacatagagttgggtgacattggt 9173018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 447
Target Start/End: Original strand, 10163501 - 10163579
Alignment:
Q  369 gtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    ||||||||| |||||| ||||| ||||| ||| |||| ||| |||  || |||||||||||||  ||||||||||||||    
T  10163501 gtaccaatgttatataacattgaccaataaaaatgtgccacatactgatattactttataaataatttatttgatatat 10163579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 14892399 - 14892349
Alignment:
Q  181 ttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgt 231  Q
    ||||||||||||||||| | |||||||||||||||||  ||| ||||||||    
T  14892399 ttgggtgacatagagttggatgacattggtgacattgatcaatcacaatgt 14892349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 446
Target Start/End: Complemental strand, 14566029 - 14565928
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    ||||| ||| ||||||||| ||||||||||||| |||||| |||||  ||| || ||||||  || ||||||| ||| ||||||| |  || ||||||||    
T  14566029 ggataacacgtgtgtaccactaaggtaccaatgttatatatcattgatcaagtagagtgtgctacataccaatattattttataagtacttcatttgata 14565930  T
Q  445 ta 446  Q
    ||    
T  14565929 ta 14565928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 45213941 - 45213892
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaa 228  Q
    ||||| ||||||||||||| |||||||||| |||||||| |||| |||||    
T  45213941 acttgtgtgacatagagttgggtgacattgatgacattgaccaatcacaa 45213892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 333
Target Start/End: Complemental strand, 7755370 - 7755342
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagt 333  Q
    |||||||||||||||||||||||||||||    
T  7755370 aatgtcaccaaccacaatgtcacccaagt 7755342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 12918534 - 12918498
Alignment:
Q  305 aatgtcaccaaccacaatgtcaccc-aagtattatcc 340  Q
    ||||||||||||||||||||||||| |||||||||||    
T  12918534 aatgtcaccaaccacaatgtcacccaaagtattatcc 12918498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 333
Target Start/End: Original strand, 13421813 - 13421841
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagt 333  Q
    |||||||||||||||||||||||||||||    
T  13421813 aatgtcaccaaccacaatgtcacccaagt 13421841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 29925708 - 29925672
Alignment:
Q  173 gaaaatacttgggtgacatagagttaggtgacattgg 209  Q
    |||||||||||||| |||||||||| |||||||||||    
T  29925708 gaaaatacttgggtaacatagagttgggtgacattgg 29925672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 34563382 - 34563326
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaa 262  Q
    |||||||||||| |||||  |||||||||| ||  |||||||| |||||||||||||    
T  34563382 ttggtgacattgaccaacttcaatgtcacaagtatctttcttcattttctttcacaa 34563326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 404
Target Start/End: Complemental strand, 34904358 - 34904298
Alignment:
Q  344 gggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgt 404  Q
    |||||| ||||| |||| |||||||||||||||| |||||| |||| || |||||| ||||    
T  34904358 gggataacacttttgtatcattaaggtaccaatgttatatatcatttgctaattaaggtgt 34904298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 37961705 - 37961741
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattg 208  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  37961705 ggaaaatacttgggtggcatagagttgggtgacattg 37961741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 37961847 - 37961791
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||  |||| ||| ||||||||| |||| ||||||| ||||    
T  37961847 acttgggtgacatagagttgagtgatatttgtgacattgaccaatcacaatgccaca 37961791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 38933586 - 38933622
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattg 208  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  38933586 ggaaaatacttaggtgacatagagttgggtgacattg 38933622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 333
Target Start/End: Complemental strand, 39819088 - 39819060
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagt 333  Q
    |||||||||||||||||||||||||||||    
T  39819088 aatgtcaccaaccacaatgtcacccaagt 39819060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 1e-42; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 208 - 341
Target Start/End: Complemental strand, 6607527 - 6607394
Alignment:
Q  208 ggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgataat 307  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||| ||||    
T  6607527 ggtgacattgaccaaccataatgtcacatgtggctttcttctttttctttcacaagatttttttgttgttttgcacacttgtaacattgtggttggtaat 6607428  T
Q  308 gtcaccaaccacaatgtcacccaagtattatccc 341  Q
    ||||||||||||||||||||| ||||||| ||||    
T  6607427 gtcaccaaccacaatgtcacctaagtattgtccc 6607394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 31846952 - 31846782
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttt 278  Q
    ||||||||||||| | | | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  31846952 acttgggtgacattgtggttggtgacattggtgatattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagatttttttgttgttt 31846853  T
Q  279 tgcacacttgtaacattatggttgat---------aatgtcaccaaccacaatgtcacccaagtattatcc 340  Q
    ||||||||||||||||| |||||| |         |||||||||||||| |||||||||||||||||||||    
T  31846852 tgcacacttgtaacattttggttggtaatgtcacgaatgtcaccaaccataatgtcacccaagtattatcc 31846782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 12473699 - 12473802
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||| |||||||||||    
T  12473699 ggataccacttgtataccattaaggtaccaatggtatataccattggccaattagagtgtgccacctaccaatgttactttatagatgctttatttgata 12473798  T
Q  445 tatt 448  Q
    ||||    
T  12473799 tatt 12473802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 12528108 - 12528211
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||| |||||||||||    
T  12528108 ggataccacttgtataccattaaggtaccaatggtatataccattggccaattagagtgtgccacctaccaatgttactttatagatgctttatttgata 12528207  T
Q  445 tatt 448  Q
    ||||    
T  12528208 tatt 12528211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 351 - 447
Target Start/End: Complemental strand, 33249544 - 33249448
Alignment:
Q  351 cacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33249544 cacttgtgtaccattaaggtacaaatggtatatacaattggccaattagagtgtgtcacctaccaatgttactttataaatgctttatttgatatat 33249448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 21260789 - 21260892
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    |||| |||||| | ||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21260789 ggattccacttatataccattaaggtaccaatgatatatatcattggccaattagagtgtgtcacctaccaatgttactttataaatgttttatttgata 21260888  T
Q  445 tatt 448  Q
    ||||    
T  21260889 tatt 21260892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 350 - 446
Target Start/End: Complemental strand, 35869742 - 35869646
Alignment:
Q  350 ccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatata 446  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| ||||||||||||||||| ||||||||||||||||||||||    
T  35869742 ccacttgtgtaccattaaggtaccaatggtatataccattgaccaattataatgtgccacctaccaatgttactatataaatgttttatttgatata 35869646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 344 - 447
Target Start/End: Original strand, 52012772 - 52012875
Alignment:
Q  344 gggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgat 443  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||||    
T  52012772 gggacaccacttgtgtaccattaaggtaccaatgttatataacattgaccaataaaagtgtgccacataccaatgttactttataaatgttttatttgat 52012871  T
Q  444 atat 447  Q
    ||||    
T  52012872 atat 52012875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 344 - 444
Target Start/End: Complemental strand, 52910226 - 52910126
Alignment:
Q  344 gggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgat 443  Q
    |||||| |||||||||||||| | |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  52910226 gggataacacttgtgtaccataatggtaccaatgttatataccattggccaattaaagtgtgccacctaccaatattactttataaatgctttatttgat 52910127  T
Q  444 a 444  Q
    |    
T  52910126 a 52910126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 350 - 448
Target Start/End: Original strand, 22343337 - 22343435
Alignment:
Q  350 ccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    |||||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  22343337 ccacttgtgtaccattaaggtatcaatggtatatatcattgaccaattagagtgtgtcatctatcaatgttactttataaatgctttatttgatatatt 22343435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 55590477 - 55590559
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttat 427  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||  |||||| ||||||||||||||||||||||||||||    
T  55590477 ggattccacttgtgtaccattaaggtaccaatggtatatatcattgatcaattatagtgtgtcacctaccaatgttactttat 55590559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 351 - 432
Target Start/End: Complemental strand, 34829253 - 34829172
Alignment:
Q  351 cacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatg 432  Q
    ||||| ||||| ||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  34829253 cacttatgtactattaaggtaccaatgatatatatcaatggccaattaaagtgtgtcacctaccaatgttactttataaatg 34829172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 348 - 447
Target Start/End: Complemental strand, 9799536 - 9799437
Alignment:
Q  348 taccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    |||||||||| ||||||||||||||||||| |||||| ||||| ||||  | | |||| ||| |||||||||||||||||||||||||||||| ||||||    
T  9799536 taccacttgtataccattaaggtaccaatgttatataacattgaccaacaagaatgtgccacataccaatgttactttataaatgttttatttaatatat 9799437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 51811909 - 51812012
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    |||| ||||| |||||||||||||||| ||| | ||||||  |||||||||||| ||| || ||||||||||||||||||||||||| |||| |||||||    
T  51811909 ggattccactcgtgtaccattaaggtatcaaagatatatattattggccaattagagtatgccacctaccaatgttactttataaattttttttttgata 51812008  T
Q  445 tatt 448  Q
    ||||    
T  51812009 tatt 51812012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 30710041 - 30709986
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30710041 acttgggtgacatagagttaggtgacattggtgacattggccaatcacaatgtcac 30709986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 345 - 447
Target Start/End: Complemental strand, 49999764 - 49999662
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    ||||| |||||||||||||| ||| ||| |||| ||| |  |||||| |||||| |||||||||| ||||||||||| |||||||||| |||||||||||    
T  49999764 ggataacacttgtgtaccatcaagatactaatgttatgtgtcattggtcaattagagtgtgtcacataccaatgttattttataaatgctttatttgata 49999665  T
Q  445 tat 447  Q
    |||    
T  49999664 tat 49999662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 51265436 - 51265498
Alignment:
Q  173 gaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  51265436 gaaaatacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccaca 51265498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 340
Target Start/End: Original strand, 31012152 - 31012294
Alignment:
Q  207 tggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttg---- 302  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||         ||||||||||| |||||||| ||| ||||||        
T  31012152 tggtgacattgaccaaccacaatgtcacatgtgacttttttctttttctttcacaatttttttttgttgttttgcatacttgtaatattgtggttggtaa 31012251  T
Q  303 -----ataatgtcaccaaccacaatgtcacccaagtattatcc 340  Q
          ||||||||||||||||||||||||| |||||||||||    
T  31012252 tgtcactaatgtcaccaaccacaatgtcacctaagtattatcc 31012294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 6271692 - 6271755
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  6271692 ggaaaatacttgggtgacatagagttgggtgatattggtgacattggccaatcacaatgccaca 6271755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 315
Target Start/End: Original strand, 6608375 - 6608482
Alignment:
Q  208 ggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaaga-nnnnnnngttgttttgcacacttgtaacattatggttgataa 306  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||||||||||| ||||        ||||||||||| |||||||||||| |||||| |||    
T  6608375 ggtgacattggccaaccataatgtcacacgtggcttccttctttttctttca-aagattctttttgttgttttgcagacttgtaacattgtggttggtaa 6608473  T
Q  307 tgtcaccaa 315  Q
    |||||||||    
T  6608474 tgtcaccaa 6608482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 23444417 - 23444354
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  23444417 ggaaaatatttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccaca 23444354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 35682163 - 35682217
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtca 233  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  35682163 acttgggtgacatagagttaggtgatattggtgacattggccaatcacaatgtca 35682217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 381 - 440
Target Start/End: Original strand, 1796163 - 1796222
Alignment:
Q  381 tataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttattt 440  Q
    |||||||||||||||||| | |||| |||||| |||||||||||||||||||||||||||    
T  1796163 tataccattggccaattatattgtgccacctatcaatgttactttataaatgttttattt 1796222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 43063537 - 43063599
Alignment:
Q  201 tgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaag 263  Q
    |||||||||||||||| |||||||||||||||||| ||||||||| ||  |||||||||||||    
T  43063537 tgacattggtgacattagccaaccacaatgtcacaagtggctttcatcactttctttcacaag 43063599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 47661981 - 47661927
Alignment:
Q  181 ttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  47661981 ttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcaca 47661927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 30861920 - 30861859
Alignment:
Q  174 aaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||| | ||| |||||||||||||||||| ||||||| ||||    
T  30861920 aaaatacttgggtgacatagagttggatgatattggtgacattggccaatcacaatgccaca 30861859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 3862687 - 3862631
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  3862687 acttaggtgacatagagttgggtgacattggtgacattggccaatcacaatgccaca 3862631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 3871444 - 3871388
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  3871444 acttaggtgacatagagttgggtgacattggtgacattggccaatcacaatgccaca 3871388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 6271843 - 6271787
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||  |||| |||||||||||||||||| ||||||||||||    
T  6271843 acttgggtgacatagagttgagtgatattggtgacattggccaatcacaatgtcaca 6271787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 42375151 - 42375095
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||    
T  42375151 acttgggtgacatagagttgggtgacattggtgacattgatcaatcacaatgtcaca 42375095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 447
Target Start/End: Original strand, 47943157 - 47943256
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattgg-ccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    |||||||||||||||||||  |||||||| ||||||  ||| | ||||| ||| |||| ||| ||||||| ||| ||||||||| |||||||||||||||    
T  47943157 accacttgtgtaccattaaaataccaatgttatataatatttgaccaataaaaatgtgccacataccaatattattttataaatattttatttgatatat 47943256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 23444268 - 23444322
Alignment:
Q  181 ttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||| |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  23444268 ttgggtaacatagagttgggtgacattggtgacattgaccaatcacaatgtcaca 23444322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 33174513 - 33174613
Alignment:
Q  345 ggataccacttgtgtaccattaaggt-accaatggtatataccattggccaattaaagtgtgtcacctaccaat----gttactttataaatgttttatt 439  Q
    |||| ||||||||||||||||||||| |||||  ||||||||||||||        ||||| ||||||||||||    ||||||||||||||||||||||    
T  33174513 ggattccacttgtgtaccattaaggttaccaagagtatataccattgg--------agtgtatcacctaccaatatatgttactttataaatgttttatt 33174604  T
Q  440 tgatatatt 448  Q
    |||||||||    
T  33174605 tgatatatt 33174613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 35682301 - 35682251
Alignment:
Q  185 gtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||||||||||||||||| || | ||||||||||||    
T  35682301 gtgacatagagttaggtgacattggtgacattgaccgatcacaatgtcaca 35682251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 26186155 - 26186099
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||| |||||| |||||    
T  26186155 acttgggtgacatagagttgggtaacattgatgacattggccaatcacaatttcaca 26186099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 51265586 - 51265530
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||| ||||||| ||||||||||||||||||| |||| || |||||||||    
T  51265586 acttgggtgacttagagttgggtgacattggtgacattgaccaatcataatgtcaca 51265530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 42375008 - 42375047
Alignment:
Q  171 tggaaaatacttgggtgacatagagttaggtgacattggt 210  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  42375008 tggaaaatacttgggtgacatagagttgggtgacattggt 42375047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 47404724 - 47404686
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggt 210  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  47404724 ggaaaatacttgggtgacatagagttgggtgacattggt 47404686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 53954745 - 53954695
Alignment:
Q  185 gtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||| ||||||||||||||||||| ||||  |||||||||||    
T  53954745 gtgacatagagttgggtgacattggtgacattgtccaattacaatgtcaca 53954695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 9712984 - 9712943
Alignment:
Q  208 ggtgacattggccaaccacaatgtcacatgtggctttcttct 249  Q
    |||||||||| ||||||||||||||||| |||||||||||||    
T  9712984 ggtgacattgaccaaccacaatgtcacaagtggctttcttct 9712943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 31430597 - 31430560
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattgg 209  Q
    |||||||||||||||||||||||||| |||||||||||    
T  31430597 ggaaaatacttgggtgacatagagttgggtgacattgg 31430560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 49998477 - 49998530
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaatta 398  Q
    ||||| || |||||||||||||||||||||||  |||||| |||||||||||||    
T  49998477 ggatagcatttgtgtaccattaaggtaccaatattatatatcattggccaatta 49998530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 5048941 - 5048885
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||| |||||||||||| |||||||||| ||||||||| ||| || |||||||||    
T  5048941 acttggatgacatagagttgggtgacattgatgacattggtcaatcataatgtcaca 5048885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 22435379 - 22435419
Alignment:
Q  209 gtgacattggccaaccacaatgtcacatgtggctttcttct 249  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  22435379 gtgacattggcaaaccacaatgtcacaagtggctttcttct 22435419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 54223577 - 54223629
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttc 258  Q
    |||||||||||| |||||||||||||||||  || ||||||||||| ||||||    
T  54223577 ttggtgacattgaccaaccacaatgtcacaaatgtctttcttctttctctttc 54223629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 2254553 - 2254608
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttc 254  Q
    ||||| |||| |||||||| ||||||||||||||||||||| |||| || ||||||    
T  2254553 ggtgatattgatgacattgaccaaccacaatgtcacatgtgacttttttttttttc 2254608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 30023639 - 30023694
Alignment:
Q  276 ttttgcacacttgtaacattatggttgat-aatgtcaccaaccacaatgtcaccca 330  Q
    ||||| |||||||| ||||| |||||| | ||||||||||||||||||||||||||    
T  30023639 ttttgtacacttgtgacattgtggttggtcaatgtcaccaaccacaatgtcaccca 30023694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 338
Target Start/End: Original strand, 32008368 - 32008402
Alignment:
Q  304 taatgtcaccaaccacaatgtcacccaagtattat 338  Q
    |||||||||||||||||||||||||||||| ||||    
T  32008368 taatgtcaccaaccacaatgtcacccaagtgttat 32008402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 38324966 - 38324924
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttc 248  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||    
T  38324966 ttggtgatattggccaaccataatatcacatgtggctttcttc 38324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 44380069 - 44380019
Alignment:
Q  181 ttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgt 231  Q
    |||||||||||||||||  ||||||||||||| |||| |||| ||||||||    
T  44380069 ttgggtgacatagagttgagtgacattggtgatattgaccaatcacaatgt 44380019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 443
Target Start/End: Original strand, 46719953 - 46720023
Alignment:
Q  373 caatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgat 443  Q
    ||||| |||||| ||||| ||||| | |||||| ||| ||| |||||||||||||||||  ||||||||||    
T  46719953 caatgttatataacattgaccaataagagtgtgccacatacaaatgttactttataaatactttatttgat 46720023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 53261114 - 53261147
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtg 239  Q
    |||||||||||| |||||||||||||||||||||    
T  53261114 ttggtgacattgaccaaccacaatgtcacatgtg 53261147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 333
Target Start/End: Complemental strand, 54613059 - 54613030
Alignment:
Q  304 taatgtcaccaaccacaatgtcacccaagt 333  Q
    ||||||||||||||||||||||||||||||    
T  54613059 taatgtcaccaaccacaatgtcacccaagt 54613030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 2325121 - 2325069
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgt 231  Q
    ||||| ||||||||||||| |||||||||| |||||||| | || ||||||||    
T  2325121 acttgagtgacatagagtttggtgacattgatgacattgacaaatcacaatgt 2325069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 28092915 - 28092859
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtg 405  Q
    |||||||||||||||||  | |||||||| |||||| |||||| |||| ||||||||    
T  28092915 accacttgtgtaccattgggataccaatgttatataacattggtcaatgaaagtgtg 28092859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 333
Target Start/End: Original strand, 31846924 - 31846952
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagt 333  Q
    |||||||||||||||||||||||||||||    
T  31846924 aatgtcaccaaccacaatgtcacccaagt 31846952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 32008397 - 32008325
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttcttt 251  Q
    ||||||||||||| | | | ||||||||| |||| |||| ||||||| ||||| ||| ||| |||||||||||    
T  32008397 acttgggtgacattgtggttggtgacattagtgatattgaccaaccaaaatgttacaagtgtctttcttcttt 32008325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 44379927 - 44379983
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||| ||||||||||||  |||||||||| ||||||||||||  | |||||||||    
T  44379927 acttggatgacatagagttgagtgacattggcgacattggccaattataatgtcaca 44379983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 46321476 - 46321440
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  46321476 ggtgatattggtgacattgaccaaccacaatgtcaca 46321440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 47661859 - 47661895
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  47661859 ggtgacattggtgacattggccaatcacaatgccaca 47661895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 54277694 - 54277638
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtg 405  Q
    |||||||||||||||||  | |||||||| |||||| |||||| |||| ||||||||    
T  54277694 accacttgtgtaccattgggataccaatgttatataacattggtcaatgaaagtgtg 54277638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 6e-41; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 343 - 448
Target Start/End: Complemental strand, 41179741 - 41179636
Alignment:
Q  343 tgggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttga 442  Q
    |||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  41179741 tgggattccacttgtgtaccattaaggtaccaatgatatatatcattggccaattaaagtgtgtcacctaccgatgttactttataaatgttttatttaa 41179642  T
Q  443 tatatt 448  Q
    ||||||    
T  41179641 tatatt 41179636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 341 - 447
Target Start/End: Complemental strand, 24338010 - 24337904
Alignment:
Q  341 catgggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttattt 440  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| || |||||| |||||| || ||||||||||||||||||| ||| |||||||    
T  24338010 catgggataccacttgtgtactattaaggtagcaatggtatataccatcggtcaattagagtgtgccatctaccaatgttactttatagatgctttattt 24337911  T
Q  441 gatatat 447  Q
    |||||||    
T  24337910 gatatat 24337904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 358 - 447
Target Start/End: Complemental strand, 4708470 - 4708381
Alignment:
Q  358 gtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    |||||| |||||||||||||| ||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4708470 gtaccactaaggtaccaatggcatatatcatgcgccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 4708381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 349 - 447
Target Start/End: Original strand, 1514802 - 1514900
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    ||||||||||||||||||||||||||||| |||||| |||||  |||| | |||||  ||| |||||||||||||||||||||||||||||||||||||    
T  1514802 accacttgtgtaccattaaggtaccaatgttatataacattgatcaataagagtgtaccacataccaatgttactttataaatgttttatttgatatat 1514900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 43465112 - 43465204
Alignment:
Q  208 ggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggt 300  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||| ||||    
T  43465112 ggtgacattggccaaccacaatatcacatgtggctttcttctttttttttcacaagatttttttgttgttttgcacacttgtaacattgtggt 43465204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 348 - 448
Target Start/End: Original strand, 18168383 - 18168483
Alignment:
Q  348 taccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    |||||| | |||||||||||||||||||||||||||| |||||  |||||| |||||  ||||||||||| |||||||||||||  ||||||||||||||    
T  18168383 taccacctctgtaccattaaggtaccaatggtatatatcattgatcaattagagtgtcccacctaccaatcttactttataaatactttatttgatatat 18168482  T
Q  448 t 448  Q
    |    
T  18168483 t 18168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 348 - 448
Target Start/End: Original strand, 18631940 - 18632040
Alignment:
Q  348 taccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    |||||| | |||||||||||||||||||||||||||| |||||  |||||| |||||  ||||||||||| |||||||||||||  ||||||||||||||    
T  18631940 taccacctctgtaccattaaggtaccaatggtatatatcattgatcaattagagtgtcccacctaccaatcttactttataaatactttatttgatatat 18632039  T
Q  448 t 448  Q
    |    
T  18632040 t 18632040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 351 - 448
Target Start/End: Complemental strand, 32826005 - 32825908
Alignment:
Q  351 cacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    ||||||||||||||||| ||| ||||| | |||||||||||||||||| ||| |||||| || |||||||| ||||||  ||||||||||||||||||    
T  32826005 cacttgtgtaccattaaagtatcaatgttgtataccattggccaattagagtatgtcacatatcaatgttattttatatgtgttttatttgatatatt 32825908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 350 - 446
Target Start/End: Complemental strand, 11254198 - 11254103
Alignment:
Q  350 ccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatata 446  Q
    ||||||||||||||||||  |||||||| |||||| ||||| ||| ||| ||| |  ||||||||||||||||||||||||||||||||||||||||    
T  11254198 ccacttgtgtaccattaaattaccaatgatatatatcattgacca-ttatagtataccacctaccaatgttactttataaatgttttatttgatata 11254103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 35441121 - 35441054
Alignment:
Q  168 atatggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  35441121 atatagaaaatacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccaca 35441054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 5033151 - 5033214
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||    
T  5033151 ggaaaatacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgccaca 5033214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 5667246 - 5667184
Alignment:
Q  171 tggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtca 233  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||  |||||||||    
T  5667246 tggaaaatacttgggtgacatagagtttgatgacattggtgacattggccaattacaatgtca 5667184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 8243546 - 8243473
Alignment:
Q  162 atgtttatatggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||  |||||||||||||||||||||||||| ||||||||||||||| |||| ||| ||||||| ||||    
T  8243546 atgtttatcgggaaaatacttgggtgacatagagttgggtgacattggtgacgttggtcaatcacaatgccaca 8243473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 2581814 - 2581878
Alignment:
Q  171 tggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||||||| ||||||| ||||    
T  2581814 tggaaaatacttgggtgacatagaattgggtgacattgttgacattggccaatcacaatgccaca 2581878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 5033302 - 5033246
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  5033302 acttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcaca 5033246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 7166811 - 7166886
Alignment:
Q  4 tgtcaagttttaccaaaacatcctcaacaatttgctgcattagttgaccctcactccttggatgataataattata 79  Q
    |||| |||||| |||||| |||||||||||||||||||| ||||| | | |||||||||||||| |||||||||||    
T  7166811 tgtctagttttgccaaaagatcctcaacaatttgctgcactagttcagcttcactccttggatggtaataattata 7166886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 22649835 - 22649898
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||| ||||    
T  22649835 ggaaaatacttgggtgacatagagttgagtgacattggtgacattggctaatcacaatgccaca 22649898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 33841739 - 33841676
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||| || |||| ||||    
T  33841739 ggaaaatacttgggtgacatagagttgggtgacattggtgacattgaccaatcagaatgccaca 33841676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 5667094 - 5667150
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| | |||||||||||||||||| ||| ||||||||||||    
T  5667094 acttgggtgacatagagttggatgacattggtgacattggtcaatcacaatgtcaca 5667150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 10086748 - 10086808
Alignment:
Q  173 gaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtca 233  Q
    |||||||||||||||||||||| || ||||||||| |||||||||| ||| ||||||||||    
T  10086748 gaaaatacttgggtgacatagaattgggtgacattagtgacattggtcaatcacaatgtca 10086808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 33841588 - 33841644
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| |||| |||||||    
T  33841588 acttgggtgacatagagttgggtgacattggtgacattgaccaatcacattgtcaca 33841644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 35440966 - 35441022
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||||    
T  35440966 acttgggtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcaca 35441022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 10086891 - 10086842
Alignment:
Q  186 tgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  10086891 tgacatagagttgggtgacattggtgacattgaccaatcacaatgtcaca 10086842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 8796419 - 8796475
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||||||||| ||| |||| ||||| ||| ||||||||||||    
T  8796419 acttgggtgacatagagttaggtgatatttgtgatattggtcaatcacaatgtcaca 8796475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 3264720 - 3264807
Alignment:
Q  9 agttttaccaaaacatcctcaacaatttgctgcattagttgaccctcactccttggatgataataattataaacacagagtaagcata 96  Q
    |||||| ||||||| ||| | ||||||||||||||||||| ||| ||| ||||||| ||||||||| |||| || || ||| ||||||    
T  3264720 agtttttccaaaacgtccgccacaatttgctgcattagttcaccttcattccttgggtgataataagtatacactcaaagtgagcata 3264807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 336
Target Start/End: Complemental strand, 33763589 - 33763461
Alignment:
Q  209 gtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttga-taat 307  Q
    |||||||||| |||| ||||| ||||| ||| ||||||||||||||||||| || |       |||  |||  ||| |||||| ||| |||||||  |||    
T  33763589 gtgacattggtcaactacaatatcacaagtgcctttcttctttttctttcataatatttttttgtttctttatacatttgtaatattgtggttgaccaat 33763490  T
Q  308 gtcaccaaccacaatgtcacccaagtatt 336  Q
    |||||||||||||||||||||||| ||||    
T  33763489 gtcaccaaccacaatgtcacccaattatt 33763461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 13469969 - 13470046
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttct 249  Q
    |||||||||||||||||||| |  ||  ||||||||| | | ||||||||||||| |||||||||||| |||| ||||    
T  13469969 ggaaaatacttgggtgacatggcatttagtgacattgtttatattggccaaccacgatgtcacatgtgacttttttct 13470046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 31470771 - 31470824
Alignment:
Q  209 gtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaa 262  Q
    ||||||||| ||||||||||||||||| ||  | ||||||||||||||||||||    
T  31470771 gtgacattgaccaaccacaatgtcacaagtatcattcttctttttctttcacaa 31470824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 7931664 - 7931605
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttca 259  Q
    |||||||||| |||||||||| |||||||||||||||  || ||||||||||| |||||||    
T  7931664 ggtgacattg-tgacattggcaaaccacaatgtcacaaatgtctttcttctttctctttca 7931605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 45191272 - 45191216
Alignment:
Q  175 aaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgt 231  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| |||| || |||||    
T  45191272 aaatacttgggtgacatagagttggatgatattggtgacattgaccaatcaaaatgt 45191216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 1605047 - 1605082
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagtattatcc 340  Q
    |||||||||||| |||||||||||||||||||||||    
T  1605047 aatgtcaccaactacaatgtcacccaagtattatcc 1605082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 1880236 - 1880289
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtca 233  Q
    |||||||||||||||| || ||||||| ||||||||||| |||| ||||||||||    
T  1880236 acttgggtgacatagaatt-ggtgacactggtgacattgaccaatcacaatgtca 1880289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 8796557 - 8796507
Alignment:
Q  185 gtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||| ||||||| ||||||||||||| |||| || |||||||||    
T  8796557 gtgacatagagctaggtgatattggtgacattgaccaatcaaaatgtcaca 8796507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 235
Target Start/End: Complemental strand, 31470879 - 31470849
Alignment:
Q  205 attggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||||||||||    
T  31470879 attggtgacattggccaaccacaatgtcaca 31470849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 43465221 - 43465259
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagtattatcccat 343  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  43465221 aatgtcaccaaccagaatgtcatccaagtattatcccat 43465259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 43844608 - 43844554
Alignment:
Q  181 ttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||| | |||||||||||| ||||  ||| ||||||||||||    
T  43844608 ttgggtgacatagagttggatgacattggtgatattgatcaatcacaatgtcaca 43844554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 6894152 - 6894075
Alignment:
Q  186 tgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaag 263  Q
    ||||||||  || ||||| |||||||||||||  |||||||||||||| | |||| |||||||| | | |||||||||    
T  6894152 tgacatagcatttggtgatattggtgacattgatcaaccacaatgtcataagtggttttcttctatctgtttcacaag 6894075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 16687543 - 16687510
Alignment:
Q  309 tcaccaaccacaatgtcacccaagtattatccca 342  Q
    |||||||||||||||||| |||||||||||||||    
T  16687543 tcaccaaccacaatgtcatccaagtattatccca 16687510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 45051372 - 45051339
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtg 239  Q
    ||||||||||||||| ||||||||||||||||||    
T  45051372 ttggtgacattggccgaccacaatgtcacatgtg 45051339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 4e-39; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 344 - 446
Target Start/End: Original strand, 35341530 - 35341632
Alignment:
Q  344 gggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgat 443  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  35341530 gggattccacttgtgtaccattaaggtaccaatgatatataccattgaccaattatagtgtgccacctaccaatgttactttataaatgttttatttgat 35341629  T
Q  444 ata 446  Q
    |||    
T  35341630 ata 35341632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 206 - 338
Target Start/End: Original strand, 17272723 - 17272864
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgata 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||| ||    
T  17272723 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagatttttttgttgttttgcacacttgtaacattgtggttggta 17272822  T
Q  306 atg---------tcaccaaccacaatgtcacccaagtattat 338  Q
    |||         ||||||||||||||||||||||||||||||    
T  17272823 atgtcaccaatgtcaccaaccacaatgtcacccaagtattat 17272864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 344 - 445
Target Start/End: Original strand, 48250148 - 48250249
Alignment:
Q  344 gggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgat 443  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||| |||||| |||||| |||||||||||||||||||||| ||| ||||||||||    
T  48250148 gggataccacttgtgtaccattaaggtaccaatgatatatatcattggtcaattagagtgtgccacctaccaatgttactttatagatgctttatttgat 48250247  T
Q  444 at 445  Q
    ||    
T  48250248 at 48250249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 7211884 - 7211939
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcaca 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7211884 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcaca 7211939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 291
Target Start/End: Complemental strand, 7212027 - 7211947
Alignment:
Q  211 gacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaa 291  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||       ||||||||||||||||||||    
T  7212027 gacattggccaaccacaatgtcacatgtgactttcttctttttctttcacaagatttttttgttgttttgcacacttgtaa 7211947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 315
Target Start/End: Original strand, 29681789 - 29681897
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgata 305  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||| ||| ||||||       |||||||| ||||||||||||||| |||||| ||    
T  29681789 ttggtgacattggccaaccacaacgtcacatgtggcttt-tttttttttttttacaagatatttttgttgttttacacacttgtaacattgtggttggta 29681887  T
Q  306 atgtcaccaa 315  Q
    ||||||||||    
T  29681888 atgtcaccaa 29681897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 40893218 - 40893114
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatg-ttttatttgat 443  Q
    ||||||||||||| |||||| || |||  |||||||||||||||||| |||||| | ||| ||| ||| ||||||||||||||||||| |||||||||||    
T  40893218 ggataccacttgtataccatcaaagtattaatggtatataccattggtcaattagaatgtctcatctatcaatgttactttataaatgcttttatttgat 40893119  T
Q  444 atatt 448  Q
    |||||    
T  40893118 atatt 40893114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 11016859 - 11016922
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  11016859 ggaaaatacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccaca 11016922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 354 - 443
Target Start/End: Complemental strand, 31307041 - 31306951
Alignment:
Q  354 ttgtgtaccattaaggtaccaatggtatataccattggccaatt-aaagtgtgtcacctaccaatgttactttataaatgttttatttgat 443  Q
    |||||||||||||| ||| ||||| |||||| ||||| |||||| ||||||||  ||||||||||||||||||||||||| ||||||||||    
T  31307041 ttgtgtaccattaaagtatcaatgatatatatcattgtccaatttaaagtgtgctacctaccaatgttactttataaatgctttatttgat 31306951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 45231996 - 45231939
Alignment:
Q  174 aaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgt 231  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  45231996 aaaatacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgt 45231939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 34854843 - 34854780
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||    
T  34854843 ggaaaatacttgggtgacatagagttgggtgacattggtgacattggtcaatcacaatgccaca 34854780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 41018376 - 41018313
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||| ||||    
T  41018376 ggaaaatacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgccaca 41018313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 4290686 - 4290630
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  4290686 acttgggtgacatacagttgggtgacattggtgacattggccaatcacaatgtcaca 4290630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 11017010 - 11016954
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  11017010 acttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcaca 11016954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 38975790 - 38975858
Alignment:
Q  167 tatatggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||| |||||||||||||||||||||||||| |||||||||||| ||||||| ||| ||||||| ||||    
T  38975790 tatacggaaaatacttgggtgacatagagttgggtgacattggtaacattggtcaatcacaatgccaca 38975858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 42628436 - 42628383
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtc 232  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||    
T  42628436 acttgggtgacatagagttgggtgacattggtgatattggccaatcacaatgtc 42628383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 25099383 - 25099327
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaa 262  Q
    |||||||| |||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  25099383 ttggtgactttggtcaaccacaatgtcacaagtgtctttcttctttttctttcacaa 25099327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 48000684 - 48000747
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||  ||| ||||||| ||||    
T  48000684 ggaaaatacttgggtgacattgagttgggtgacattggtgacattgatcaatcacaatgccaca 48000747  T

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Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 448
Target Start/End: Original strand, 48072389 - 48072485
Alignment:
Q  350 ccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    |||||||||||| |||||||||||||| |||||  ||||||  |||||| |||||| ||| |  |||||||| ||||||||| ||||||||||| ||||    
T  48072389 ccacttgtgtactattaaggtaccaatagtata--ccattgatcaattagagtgtgccacatttcaatgttattttataaatattttatttgatgtatt 48072485  T

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Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 4290537 - 4290598
Alignment:
Q  174 aaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||| ||| ||||||| ||||    
T  4290537 aaaatacttgggtgacatagagttgggtgatattggtgatattggtcaatcacaatgccaca 4290598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 414
Target Start/End: Original strand, 40856384 - 40856456
Alignment:
Q  342 atgggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctacc 414  Q
    |||||||||||||| |||| ||||||||||| |||| ||||||  ||||  |||||| |||||||||||||||    
T  40856384 atgggataccacttatgtatcattaaggtactaatgatatatattattgatcaattagagtgtgtcacctacc 40856456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 448
Target Start/End: Original strand, 40856481 - 40856529
Alignment:
Q  400 agtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    |||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  40856481 agtgtgtcacctaccaatgttattttatagatgttttatttgatgtatt 40856529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 48000878 - 48000822
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||| |||||||||| ||||||||||||||||||| |||| ||||||| ||||    
T  48000878 acttgggtcacatagagttgggtgacattggtgacattgaccaatcacaatgccaca 48000822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 29681905 - 29681940
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagtattatcc 340  Q
    ||||||||||||||||||||||||||||||||||||    
T  29681905 aatgtcaccaaccacaatgtcacccaagtattatcc 29681940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 43500001 - 43500064
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaa 262  Q
    ||||||||| |||| ||||| ||| ||||||||||||| || | ||||||||||||||||||||    
T  43500001 ggtgacattagtgatattggtcaatcacaatgtcacatatgacattcttctttttctttcacaa 43500064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 46282892 - 46282951
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtgg-ctttcttctttttctttcacaaga 264  Q
    |||||||||||||||||||||||| ||||| ||||  |||||||||| ||||||||||||    
T  46282892 ttggtgacattggccaaccacaatatcacaagtggtttttcttctttctctttcacaaga 46282951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 32694717 - 32694643
Alignment:
Q  374 aatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    |||| |||||||||||||  ||||| |||||  || ||| ||||||||||||||||||  |||||||||||||||    
T  32694717 aatgatatataccattggtaaattagagtgtcccatctatcaatgttactttataaattctttatttgatatatt 32694643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 38975946 - 38975908
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattg 217  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  38975946 acttaggtgacatagagttaggtgacattggtgacattg 38975908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 15027532 - 15027589
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaat 229  Q
    ||||||||||||||| ||||||||||   ||||||||||||||||| |||| ||||||    
T  15027532 ggaaaatacttgggtaacatagagttgtttgacattggtgacattgaccaatcacaat 15027589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 29053453 - 29053416
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattgg 209  Q
    |||||||||||||||||||||||||| |||||||||||    
T  29053453 ggaaaatacttgggtgacatagagttgggtgacattgg 29053416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 6980988 - 6980948
Alignment:
Q  209 gtgacattggccaaccacaatgtcacatgtggctttcttct 249  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  6980988 gtgacattggccaaccacaatgttacaagtggctttcttct 6980948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 27028725 - 27028781
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||| ||||||||| ||||  ||||||||||||||||||| ||| ||||||||||||    
T  27028725 actttggtgacatatagttgagtgacattggtgacattggacaatcacaatgtcaca 27028781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 42494799 - 42494839
Alignment:
Q  209 gtgacattggccaaccacaatgtcacatgtggctttcttct 249  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  42494799 gtgacattggcaaaccacaatgtcacaagtggctttcttct 42494839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 23178469 - 23178519
Alignment:
Q  396 ttaaagtgtgtcacctaccaatgttactttataaatgttttatttgatata 446  Q
    ||||| |||||||| || |||||||| ||||||||||||||||| ||||||    
T  23178469 ttaaaatgtgtcacatatcaatgttattttataaatgttttattcgatata 23178519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 235
Target Start/End: Original strand, 32315731 - 32315760
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||||||||||||||    
T  32315731 ttggtgacattggccaaccacaatgtcaca 32315760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 333
Target Start/End: Complemental strand, 7211894 - 7211866
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagt 333  Q
    |||||||||||||||||||||||||||||    
T  7211894 aatgtcaccaaccacaatgtcacccaagt 7211866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 333
Target Start/End: Complemental strand, 17272733 - 17272705
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagt 333  Q
    |||||||||||||||||||||||||||||    
T  17272733 aatgtcaccaaccacaatgtcacccaagt 17272705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 4e-39; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 344 - 446
Target Start/End: Complemental strand, 39570220 - 39570118
Alignment:
Q  344 gggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgat 443  Q
    ||||| ||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39570220 gggattccacttgtgtatcattaaagtatcaatggtatataccattggccaattagagtgtgtcacctaccaatgttactttataaatgttttatttgat 39570121  T
Q  444 ata 446  Q
    |||    
T  39570120 ata 39570118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 350 - 448
Target Start/End: Complemental strand, 19357432 - 19357334
Alignment:
Q  350 ccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||||||||||||    
T  19357432 ccacttgtgtaccattagggtaccaatggtatataccattggccaattagagtgtgccacctaccaatattactttataaatgctttatttgatatatt 19357334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 345 - 446
Target Start/End: Complemental strand, 11607710 - 11607609
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||    
T  11607710 ggattccacttgtataccattaaggtaccaatggtatataccattgaccaattatagtgtgccacctaccaatattactttataaatgttttatttgata 11607611  T
Q  445 ta 446  Q
    ||    
T  11607610 ta 11607609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 312
Target Start/End: Complemental strand, 29385446 - 29385313
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttt 278  Q
    ||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||       |||||||    
T  29385446 acttgggtgacattgtggttggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcgctagatttttttgttgttt 29385347  T
Q  279 tgcacacttgtaacattatggttgataatgtcac 312  Q
    ||||||||||||||||| |||||| |||| ||||    
T  29385346 tgcacacttgtaacattgtggttggtaatatcac 29385313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 1826254 - 1826357
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| || ||| |||||||||||    
T  1826254 ggataccacttgtgtaccattaaagtaccaatggtatataccattggtcaattagagtgtgtcacctaccaatattactttgtagatgctttatttgata 1826353  T
Q  445 tatt 448  Q
    ||||    
T  1826354 tatt 1826357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 355 - 446
Target Start/End: Complemental strand, 33858704 - 33858613
Alignment:
Q  355 tgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatata 446  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  33858704 tgtgtaccattaaggtaccaatagtatatatcattgaccaattatagtgtgccacctaccaatgttactttataaatgttttatttgatata 33858613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 345 - 447
Target Start/End: Original strand, 13015376 - 13015478
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| ||||| | |||||| ||| ||||||||||||||||||||| ||||||||||||    
T  13015376 ggataccacttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacataccaatgttactttataaatattttatttgata 13015475  T
Q  445 tat 447  Q
    |||    
T  13015476 tat 13015478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 342 - 447
Target Start/End: Original strand, 29989954 - 29990059
Alignment:
Q  342 atgggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttg 441  Q
    |||||| ||||||||||||||||||||||| ||||| |||||| ||||| ||||| | |||||| ||| |||||||||||||||||||||||||||||||    
T  29989954 atgggacaccacttgtgtaccattaaggtatcaatgttatataacattgaccaataagagtgtgccacataccaatgttactttataaatgttttatttg 29990053  T
Q  442 atatat 447  Q
    ||||||    
T  29990054 atatat 29990059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 345 - 447
Target Start/End: Original strand, 9827783 - 9827885
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    |||| ||||||||||||||||||||||||||||||||||||| || | |||||| |||||  ||||||||||| ||||||||||||| ||||||||||||    
T  9827783 ggattccacttgtgtaccattaaggtaccaatggtatatacctttagtcaattagagtgtaccacctaccaatattactttataaatattttatttgata 9827882  T
Q  445 tat 447  Q
    |||    
T  9827883 tat 9827885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 349 - 447
Target Start/End: Complemental strand, 38010786 - 38010688
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||| | |||||| ||| |||||||||||||||||||||  ||||||||||||||    
T  38010786 accacttgtgtaccattaaggtaccaatgttatataacattggccaataagagtgtgccacataccaatgttactttataaatactttatttgatatat 38010688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 1839970 - 1840053
Alignment:
Q  181 ttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaaga 264  Q
    ||||||||||| | | | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1839970 ttgggtgacattgtggttggtgacattgatgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaaga 1840053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 179 - 315
Target Start/End: Original strand, 19417442 - 19417577
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttt 278  Q
    ||||||||||||| | | | |||||||||||||||||||| |||| ||||||||||||||| |||||||  |||||||||||||||       |||||||    
T  19417442 acttgggtgacattgtggttggtgacattggtgacattggtcaactacaatgtcacatgtgactttctttcttttctttcacaagatttttttgttgttt 19417541  T
Q  279 tgcacacttgtaacattatggttgataatgtcaccaa 315  Q
    |||||||||| |||||| |||||| ||||||||||||    
T  19417542 tgcacacttg-aacattgtggttggtaatgtcaccaa 19417577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 349 - 445
Target Start/End: Original strand, 13086752 - 13086848
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatat 445  Q
    ||||||||||||||||||||||||||||| |||||| ||||| ||||| | |||||| ||| ||||||||||| ||||||||| |||||||||||||    
T  13086752 accacttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacataccaatgttattttataaatattttatttgatat 13086848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 349 - 447
Target Start/End: Complemental strand, 13478217 - 13478119
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    ||||||||||||||||||||| ||||||| |||||| ||||| ||||| | |||||| ||| ||||| ||||||||||||||| |||||||||||||||    
T  13478217 accacttgtgtaccattaaggaaccaatgttatataacattgaccaataagagtgtgccacataccattgttactttataaatattttatttgatatat 13478119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 210 - 340
Target Start/End: Complemental strand, 5215700 - 5215560
Alignment:
Q  210 tgacattggccaaccacaatgtcacatgtggcttt-cttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgataatg 308  Q
    ||||||||| |||||||||| |||||||||||||| ||| ||||||||||||||||       ||||||||| |||||||||||||| |||||| |||||    
T  5215700 tgacattggtcaaccacaatatcacatgtggcttttcttatttttctttcacaagattttgttgttgttttgtacacttgtaacattgtggttggtaatg 5215601  T
Q  309 tca---------ccaaccacaatgtcacccaagtattatcc 340  Q
    |||         |||||||||||||||||||||||||||||    
T  5215600 tcaccaatgttaccaaccacaatgtcacccaagtattatcc 5215560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 366 - 448
Target Start/End: Original strand, 33271630 - 33271712
Alignment:
Q  366 aaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    |||||||||||| |||||| ||||||||||||| ||||||||| ||| ||||||||||| ||||||| |||||||||||||||    
T  33271630 aaggtaccaatgatatatatcattggccaattagagtgtgtcatctatcaatgttacttgataaatgctttatttgatatatt 33271712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 19655148 - 19655211
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  19655148 ggaaaatacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccaca 19655211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 291080 - 291150
Alignment:
Q  165 tttatatggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  291080 tttataaggaaaatacttgagtgacatagagttgggtgacattggtgacattggccaatcacaatgccaca 291150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 2953331 - 2953275
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  2953331 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgtcaca 2953275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 9177979 - 9177874
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgata 305  Q
    ||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||| |        ||||||||||||||| ||||||| |||||| ||    
T  9177979 ttggtgatattggccaaccacaatatcacatgtgactttcttctttttctttcacaatatttttttattgttttgcacacttataacattgtggttggta 9177880  T
Q  306 atgtca 311  Q
     |||||    
T  9177879 gtgtca 9177874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 340
Target Start/End: Original strand, 36568733 - 36568871
Alignment:
Q  211 gacattggccaaccacaa-tgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttga------ 303  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||||||||| |       ||||||||| |||||||||||||| |||||||          
T  36568733 gacattggtcaaccacaaatgtcacatgtggctttcttccttttctttcacaata-ttttttgttgttttgtacacttgtaacattgtggttgattatgt 36568831  T
Q  304 ---taatgtcaccaaccacaatgtcacccaagtattatcc 340  Q
       ||||||||||||||||||||||||  |||||||||||    
T  36568832 cactaatgtcaccaaccacaatgtcacataagtattatcc 36568871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 447
Target Start/End: Complemental strand, 13421180 - 13421084
Alignment:
Q  351 cacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    ||||||||||||||||||||| ||||| |||||| |||||  |||| | ||||| |||  || ||||||||||||||||||| ||||||| ||||||    
T  13421180 cacttgtgtaccattaaggtatcaatgttatataacattgatcaataagagtgtatcaaatatcaatgttactttataaatgctttatttaatatat 13421084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 16971285 - 16971229
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  16971285 acttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcaca 16971229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 29699508 - 29699452
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  29699508 acttgggtgacatagagttgggtgatattggtgacattggccaatcacaatgtcaca 29699452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 7137637 - 7137721
Alignment:
Q  178 tacttgggtgacatag-agttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaa 262  Q
    |||||||||||||| | |||| ||||| ||||||||||||| ||||||||||||||||| ||| |||||||| || ||||||||||    
T  7137637 tacttgggtgacattgcagtt-ggtgaaattggtgacattgaccaaccacaatgtcacaagtgactttcttcattctctttcacaa 7137721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 341
Target Start/End: Original strand, 12605570 - 12605715
Alignment:
Q  196 ttaggtgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacatt 295  Q
    ||||||||||||| ||||||||  |||||| ||||||||||||| |||||||||||  ||||||||  |       |||  |||| |||| ||| |||||    
T  12605570 ttaggtgacattg-tgacattgatcaaccataatgtcacatgtgtctttcttctttcactttcacagtacatttttgtttctttgtacacgtgtgacatt 12605668  T
Q  296 atggttga-taatgtcaccaaccacaatgtcacccaagtattatccc 341  Q
     |||||||  |||||||||||||||||||||||  ||||||||||||    
T  12605669 gtggttgaccaatgtcaccaaccacaatgtcacttaagtattatccc 12605715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 19598322 - 19598379
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaat 229  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||| ||| ||||||    
T  19598322 ggaaaatacttgggtgacatagagttgggtaacattggtgacattggtcaatcacaat 19598379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 407 - 448
Target Start/End: Original strand, 42148203 - 42148244
Alignment:
Q  407 cacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42148203 cacctaccaatgttactttataaatgttttatttgatatatt 42148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 3899980 - 3899924
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||||    
T  3899980 acttgggtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcaca 3899924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 19655299 - 19655243
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||  |||||||||||||||||| |||| ||||||||||||    
T  19655299 acttgggtgacatagagttgagtgacattggtgacattgtccaatcacaatgtcaca 19655243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 23219416 - 23219360
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaa 262  Q
    |||||||| ||||||||||||||||||| || || ||||||||||||||||||||||    
T  23219416 ttggtgaccttggccaaccacaatgtcatatatgactttcttctttttctttcacaa 23219360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 291238 - 291182
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||| |||||||| |||||||||||||||||||  ||| ||||||||||||    
T  291238 acttgggtgatatagagttgggtgacattggtgacattgatcaatcacaatgtcaca 291182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 12913800 - 12913856
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||| |||||||| ||||  ||||||||||||||||||||||| ||||||||||||    
T  12913800 acttgtgtgacatatagttgagtgacattggtgacattggccaatcacaatgtcaca 12913856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 13312261 - 13312317
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||| ||||||||||||||||||||||||| ||||||||  ||| ||||||||||||    
T  13312261 acttaggtgacatagagttaggtgacattgatgacattgatcaatcacaatgtcaca 13312317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 400 - 447
Target Start/End: Original strand, 37881191 - 37881238
Alignment:
Q  400 agtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    |||||| ||| ||||||||||||||||||||| |||||||||||||||    
T  37881191 agtgtgccacataccaatgttactttataaatattttatttgatatat 37881238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 2093934 - 2093988
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtca 233  Q
    ||||||||||||||||||| ||||| |||||||||||||  ||| ||||||||||    
T  2093934 acttgggtgacatagagttgggtgatattggtgacattgatcaatcacaatgtca 2093988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 2953197 - 2953235
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggt 210  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  2953197 ggaaaatacttgggtgacatagagttgggtgacattggt 2953235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 30117827 - 30117881
Alignment:
Q  181 ttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||| |||||||| |||||||||||||| |||| |||| ||||||||||||    
T  30117827 ttgggtgatatagagttgggtgacattggtgatattgaccaatcacaatgtcaca 30117881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 12913947 - 12913890
Alignment:
Q  176 aatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtca 233  Q
    |||| ||| ||||||||||||| |||||||||||||| ||||| ||| ||||||||||    
T  12913947 aatatttgtgtgacatagagttgggtgacattggtgatattggtcaatcacaatgtca 12913890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 42772099 - 42772054
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttcttt 251  Q
    |||||||||||| ||||||||||||||||| ||| |||||||||||    
T  42772099 ttggtgacattgaccaaccacaatgtcacaagtgtctttcttcttt 42772054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 2356412 - 2356364
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccaca 227  Q
    ||||| ||||||||||||| | |||||||||||||||||||||| ||||    
T  2356412 acttgtgtgacatagagttggatgacattggtgacattggccaatcaca 2356364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 3899839 - 3899875
Alignment:
Q  173 gaaaatacttgggtgacatagagttaggtgacattgg 209  Q
    ||||||||||||||||||||||||| |||||||||||    
T  3899839 gaaaatacttgggtgacatagagttgggtgacattgg 3899875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 39777050 - 39777086
Alignment:
Q  181 ttgggtgacatagagttaggtgacattggtgacattg 217  Q
    ||||||||||||||||| |||||||||||||||||||    
T  39777050 ttgggtgacatagagttgggtgacattggtgacattg 39777086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 445
Target Start/End: Original strand, 10292893 - 10292968
Alignment:
Q  370 taccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatat 445  Q
    |||||||| |||||| ||||||||||| | | |||| ||| ||| ||||||| ||| ||| |||||||||||||||    
T  10292893 taccaatgttatataacattggccaataagaatgtgccacgtactaatgttattttgtaagtgttttatttgatat 10292968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 4376482 - 4376424
Alignment:
Q  201 tgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttca 259  Q
    |||||||||||||| || ||||| |||||||||||  ||| |||||||||| |||||||    
T  4376482 tgacattggtgacaatgaccaacaacaatgtcacaaatggttttcttctttctctttca 4376424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 315
Target Start/End: Complemental strand, 25879376 - 25879334
Alignment:
Q  273 ttgttttgcacacttgtaacattatggttgataatgtcaccaa 315  Q
    |||||||  |||||||||||||| |||||||||||||||||||    
T  25879376 ttgttttatacacttgtaacattgtggttgataatgtcaccaa 25879334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 28819056 - 28819002
Alignment:
Q  181 ttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||  |||| |||||||||||||| ||| || |||||||||    
T  28819056 ttgggtgacatagagttgagtgatattggtgacattggtcaatcataatgtcaca 28819002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 35622809 - 35622871
Alignment:
Q  343 tgggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtg 405  Q
    ||||| |||||||||||||||||  | |||||||| |||||| |||||| |||| ||||||||    
T  35622809 tgggacaccacttgtgtaccattgggataccaatgttatataacattggtcaatgaaagtgtg 35622871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 16971143 - 16971180
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattgg 209  Q
    ||||||||||||||||||||||| || |||||||||||    
T  16971143 ggaaaatacttgggtgacatagacttgggtgacattgg 16971180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 32485699 - 32485634
Alignment:
Q  170 atggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||| || ||||| |||||| |||||| |||||||||||||||||||  ||| |||||| |||||    
T  32485699 atggataacacttgtgtgacacagagttgggtgacattggtgacattgatcaatcacaatatcaca 32485634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 1638454 - 1638510
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||| ||||| |||||||| ||||| ||| |||| ||||||||| ||||||||||||    
T  1638454 acttaggtgatatagagttgggtgatatttgtgatattggccaatcacaatgtcaca 1638510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 11983253 - 11983308
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||| || ||||| |||||||||||||| ||| || |||||||||    
T  11983253 acttgggtgacatagaatt-ggtgatattggtgacattggtcaatcaaaatgtcaca 11983308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 16439135 - 16439191
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||| ||| |||||||| ||| | |||||||||||||| ||| ||||||||||||    
T  16439135 acttggatgatatagagttgggtaatattggtgacattggtcaatcacaatgtcaca 16439191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 333
Target Start/End: Complemental strand, 19417470 - 19417442
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagt 333  Q
    |||||||||||||||||||||||||||||    
T  19417470 aatgtcaccaaccacaatgtcacccaagt 19417442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 333
Target Start/End: Original strand, 29385418 - 29385446
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagt 333  Q
    |||||||||||||||||||||||||||||    
T  29385418 aatgtcaccaaccacaatgtcacccaagt 29385446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 29699384 - 29699420
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  29699384 ggtgacattggtgacattggccaatcacaatgccaca 29699420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 37219700 - 37219756
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||| ||||||||||  || ||||| |||||||||||||| |||||||| |||||||    
T  37219700 acttaggtgacatagtatttggtgatattggtgacattggtcaaccacagtgtcaca 37219756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 34189 - 34292
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    |||| |||||||||||||||||||||||||||||||||||  |||||||||||| |||||| ||| ||||||| ||||||||||||| ||||||||||||    
T  34189 ggattccacttgtgtaccattaaggtaccaatggtatatattattggccaattagagtgtgccacttaccaatattactttataaatattttatttgata 34288  T
Q  445 tatt 448  Q
    ||||    
T  34289 tatt 34292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 8e-31; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 344 - 448
Target Start/End: Complemental strand, 5404053 - 5403949
Alignment:
Q  344 gggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgat 443  Q
    ||||||||||||||||||||||||||||| |||||||||||  ||||| || ||| ||| || |||||||||||||||||||||| ||||||||||||||    
T  5404053 gggataccacttgtgtaccattaaggtactaatggtatatattattggtcagttagagtctgccacctaccaatgttactttatagatgttttatttgat 5403954  T
Q  444 atatt 448  Q
    |||||    
T  5403953 atatt 5403949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 206 - 341
Target Start/End: Complemental strand, 2543877 - 2543734
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgat- 304  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |       |||||||| ||||||||||||||| |||||| |     
T  2543877 ttggtgacattggccaaccacaatgtcacatgtggcttttttttttttctttcacaa-atttttttgttgttttacacacttgtaacattgtggttggta 2543779  T
Q  305 --------aatgtcaccaaccacaatgtcacccaagtattatccc 341  Q
            |||||||||||||||||||||||||||||||||||||    
T  2543778 atgtcaccaatgtcaccaaccacaatgtcacccaagtattatccc 2543734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 351 - 448
Target Start/End: Complemental strand, 1212014 - 1211917
Alignment:
Q  351 cacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||  ||||| |||||  ||||||||||||||  ||| |||||||||||||||    
T  1212014 cacttgtgtaccattaaggtaccaatggtatataccattggctaattagtgtgtgccacctttcaatgttactttatcgatgctttatttgatatatt 1211917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 349 - 447
Target Start/End: Original strand, 34245566 - 34245664
Alignment:
Q  349 accacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatat 447  Q
    |||||||||||||||||||||||  |||| |||||| ||||| ||||| |||||||| ||| |||||||||||||||||||||  ||||||||||||||    
T  34245566 accacttgtgtaccattaaggtattaatgttatataacattgaccaataaaagtgtgccacgtaccaatgttactttataaatactttatttgatatat 34245664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 348 - 415
Target Start/End: Original strand, 11753165 - 11753232
Alignment:
Q  348 taccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctacca 415  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||  |||||||||    
T  11753165 taccacttgtgtaccattaaggtaccaatggtatataccatcggccaattagagtgtcccacctacca 11753232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 345 - 443
Target Start/End: Original strand, 11113551 - 11113649
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgat 443  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||| | ||| | |||||||||| ||| ||||||||||| ||| || ||||||||||    
T  11113551 ggataacacttgtgtaccattaaggtaccaatgctatataacattgactaataagagtgtgtcacatactaatgttactttgtaagtgctttatttgat 11113649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 340
Target Start/End: Original strand, 16193757 - 16193888
Alignment:
Q  209 gtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgat-aat 307  Q
    |||| ||||||||| |||||||||||| ||| ||||||||||| || ||||||| |        | |||||| |||||||| ||||| |||||||  |||    
T  16193757 gtgatattggccaatcacaatgtcacaagtgtctttcttctttctccttcacaatattttttt-tagttttgtacacttgtgacattgtggttgaccaat 16193855  T
Q  308 gtcaccaaccacaatgtcacccaagtattatcc 340  Q
    |||||||||||||||||||||||||||||||||    
T  16193856 gtcaccaaccacaatgtcacccaagtattatcc 16193888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 32645012 - 32644910
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    |||| |||| |||||||||||||| || | || ||||||| |||||||||||||| ||||||||||||| |||||||||||| ||||  |||||||| ||    
T  32645012 ggattccacctgtgtaccattaagatatcgatagtatatatcattggccaattaaggtgtgtcacctacaaatgttacttta-aaatactttatttgtta 32644914  T
Q  445 tatt 448  Q
    ||||    
T  32644913 tatt 32644910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 340
Target Start/End: Original strand, 11448089 - 11448224
Alignment:
Q  214 attggccaaccacaatgtcacatgtggctttcttctttttctttcacaagannnnnnngttgttttgcacacttgtaacattatggttgataatg----- 308  Q
    |||||||||||||||||| | |||| ||||| |||||||||||||||||         |||||||||||||||| ||||||| |||||| |||||         
T  11448089 attggccaaccacaatgttatatgtagcttttttctttttctttcacaaattttttttgttgttttgcacacttataacattgtggttggtaatgtcacc 11448188  T
Q  309 ----tcaccaaccacaatgtcacccaagtattatcc 340  Q
        ||||||||||||||||||||||||||||||||    
T  11448189 aatatcaccaaccacaatgtcacccaagtattatcc 11448224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 24975742 - 24975805
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||||||||||| | |||||||||||||||||| ||| ||||||| ||||    
T  24975742 ggaaaatacttgggtgacatagagttggctgacattggtgacattggtcaatcacaatgccaca 24975805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 369553 - 369498
Alignment:
Q  206 ttggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcaca 261  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||||| |||||||||    
T  369553 ttggtgacattgaccaaccacaatgtcacaagtgtctttcttctttctctttcaca 369498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 24587458 - 24587514
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||| |||||||||||||| ||||||||| |||||||||| ||| ||||||||||||    
T  24587458 acttaggtgacatagagttgggtgacattagtgacattggtcaatcacaatgtcaca 24587514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 369519 - 369578
Alignment:
Q  282 acacttgtaacattatggttgat-aatgtcaccaaccacaatgtcacccaagtattatcc 340  Q
    |||||||| ||||| |||||| | ||||||||||||||||||||||| ||||||||||||    
T  369519 acacttgtgacattgtggttggtcaatgtcaccaaccacaatgtcactcaagtattatcc 369578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 551313 - 551250
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||| |||||||||||||| || | ||| |||||||||||||||||| ||||||| ||||    
T  551313 ggaaaatatttgggtgacatagaattggatgatattggtgacattggccaatcacaatgccaca 551250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 12343232 - 12343185
Alignment:
Q  188 acatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  12343232 acatagagttgggtgagattggtgacattggccaatcacaatgtcaca 12343185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 24618598 - 24618652
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtca 233  Q
    ||||| ||||||||||||| |||||||||||||||||||  ||| ||||||||||    
T  24618598 acttgagtgacatagagttgggtgacattggtgacattgatcaatcacaatgtca 24618652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 178660 - 178701
Alignment:
Q  208 ggtgacattggccaaccacaatgtcacatgtggctttcttct 249  Q
    ||||||||||  ||||||||||||||||||||||||||||||    
T  178660 ggtgacattgatcaaccacaatgtcacatgtggctttcttct 178701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 17750900 - 17750955
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||| ||||||||||||| | |||||||||||||||||| ||| ||||||||||||    
T  17750900 acttgtgtgacatagagtt-gatgacattggtgacattggtcaatcacaatgtcaca 17750955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 17751043 - 17750987
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||| ||||||||||||| ||||| |||| ||||||||||| | ||||||||||||    
T  17751043 acttgtgtgacatagagttgggtgatattgatgacattggccgatcacaatgtcaca 17750987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 12343099 - 12343134
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacatt 207  Q
    |||||||||||||||||||||||||| |||||||||    
T  12343099 ggaaaatacttgggtgacatagagttgggtgacatt 12343134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 13043438 - 13043485
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggc 219  Q
    |||||||| |||||||||||||| || |||||||||||||| ||||||    
T  13043438 ggaaaatatttgggtgacatagaattgggtgacattggtgatattggc 13043485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 28581766 - 28581731
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagtattatcc 340  Q
    |||||||||||||||||||||| |||||||||||||    
T  28581766 aatgtcaccaaccacaatgtcagccaagtattatcc 28581731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 13043596 - 13043542
Alignment:
Q  181 ttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    |||||||||||||||||  |||| ||||||||||||||| || |||||| |||||    
T  13043596 ttgggtgacatagagttgagtgatattggtgacattggctaatcacaatatcaca 13043542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 1879187 - 1879243
Alignment:
Q  208 ggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaaga 264  Q
    ||||||||||| |||||||||||||| | ||| ||||||||| | | ||||||||||    
T  1879187 ggtgacattggtcaaccacaatgtcataagtgactttcttctctatttttcacaaga 1879243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 333
Target Start/End: Original strand, 2543867 - 2543895
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagt 333  Q
    |||||||||||||||||||||||||||||    
T  2543867 aatgtcaccaaccacaatgtcacccaagt 2543895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 5150616 - 5150672
Alignment:
Q  169 tatggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaacca 225  Q
    |||||| ||||||| |||||||| | | | |||||||||| ||||||||||||||||    
T  5150616 tatggataatactttggtgacattgtgcttggtgacattgatgacattggccaacca 5150672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 351 - 448
Target Start/End: Complemental strand, 13176 - 13079
Alignment:
Q  351 cacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatatatt 448  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||  ||||| |||||  ||||||||||||||  ||| |||||||||||||||    
T  13176 cacttgtgtaccattaaggtaccaatggtatataccattggctaattagtgtgtgccacctttcaatgttactttatcgatgctttatttgatatatt 13079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 350 - 446
Target Start/End: Original strand, 11195 - 11290
Alignment:
Q  350 ccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgatata 446  Q
    ||||||||||||||||||  |||||||| |||||| ||||| ||| ||| ||| |  ||||||||||||||||||||||||||||||||||||||||    
T  11195 ccacttgtgtaccattaaattaccaatgatatatatcattgacca-ttatagtataccacctaccaatgttactttataaatgttttatttgatata 11290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 23269 - 23172
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatgttttatttgata 444  Q
    ||||| |||||||||||||||||||||| |      |||| ||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||    
T  23269 ggataacacttgtgtaccattaaggtacga------tatatcattggccaattagagtgtgccacctaccaattttactttataaatattttatttgata 23176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 398
Target Start/End: Original strand, 23087 - 23141
Alignment:
Q  344 gggataccacttgtgtaccattaaggtaccaatggtatataccattggccaatta 398  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  23087 gggataacacttgtgtatcattaaggtaccaatggtatatactattggccaatta 23141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 73066 - 73170
Alignment:
Q  345 ggataccacttgtgtaccattaaggtaccaatggtatataccattggccaattaaagtgtgtcacctaccaatgttactttataaatg-ttttatttgat 443  Q
    ||||||||||||| |||||| || |||  |||||||||||||||||| |||||| | ||| ||| ||| ||||||||||||||||||| |||||||||||    
T  73066 ggataccacttgtataccatcaaagtattaatggtatataccattggtcaattagaatgtctcatctatcaatgttactttataaatgcttttatttgat 73165  T
Q  444 atatt 448  Q
    |||||    
T  73166 atatt 73170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 27368 - 27305
Alignment:
Q  172 ggaaaatacttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||| ||||    
T  27368 ggaaaatacttgggtgatatagagttgggtgacattggtgatattggccaatcacaatgccaca 27305  T

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Target: scaffold0161; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 27217 - 27271
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtca 233  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||| ||||||||||    
T  27217 acttgggtgacatagagttgggtgacattagtgatattggccaatcacaatgtca 27271  T

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Target: scaffold0586 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 7187 - 7132
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  7187 acttgtgtgacatagagtt-ggtgacattggtgacattggccaatcacaatgtcaca 7132  T

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Target: scaffold0586; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 7050 - 7100
Alignment:
Q  185 gtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||| |||||||||||||| ||| ||||| ||||||||||||    
T  7050 gtgacatagagttgggtgacattggtgatattagccaatcacaatgtcaca 7100  T

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Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 49700 - 49756
Alignment:
Q  179 acttgggtgacatagagttaggtgacattggtgacattggccaaccacaatgtcaca 235  Q
    ||||||||||||||||||| |||||||||| |||||||| |||| ||||||||||||    
T  49700 acttgggtgacatagagttgggtgacattgatgacattgaccaatcacaatgtcaca 49756  T

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Target: scaffold0016; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 49843 - 49805
Alignment:
Q  171 tggaaaatacttgggtgacatagagttaggtgacattgg 209  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  49843 tggaaaatacttcggtgacatagagttaggtgacattgg 49805  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 507735 - 507798
Alignment:
Q  201 tgacattggtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaaga 264  Q
    ||||||||||||||||| |||| |||||| | ||| |||| |||||||||| ||||||||||||    
T  507735 tgacattggtgacattgaccaatcacaatattacaagtggatttcttctttctctttcacaaga 507798  T

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Target: scaffold1315 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1315
Description:

Target: scaffold1315; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 1877 - 1819
Alignment:
Q  276 ttttgcacacttgtaacattatggttgat-aatgtcaccaaccacaatgtcacccaagt 333  Q
    ||||| |||||||| | ||| |||||||| |||||||||||||||||||||||||||||    
T  1877 ttttgtacacttgtgatattgtggttgatcaatgtcaccaaccacaatgtcacccaagt 1819  T

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Target: scaffold1293 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1293
Description:

Target: scaffold1293; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 194 - 252
Alignment:
Q  276 ttttgcacacttgtaacattatggttgat-aatgtcaccaaccacaatgtcacccaagt 333  Q
    ||||| |||||||| | ||| |||||||| |||||||||||||||||||||||||||||    
T  194 ttttgtacacttgtgatattgtggttgatcaatgtcaccaaccacaatgtcacccaagt 252  T

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Target: scaffold0343 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 12338 - 12285
Alignment:
Q  209 gtgacattggccaaccacaatgtcacatgtggctttcttctttttctttcacaa 262  Q
    ||||||||| ||||||||||||||||| ||| | ||||||||| ||||||||||    
T  12338 gtgacattgaccaaccacaatgtcacaagtgtccttcttctttctctttcacaa 12285  T

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Target: scaffold0343; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 340
Target Start/End: Complemental strand, 12261 - 12226
Alignment:
Q  305 aatgtcaccaaccacaatgtcacccaagtattatcc 340  Q
    |||||||||||| |||||||||||||||||||||||    
T  12261 aatgtcaccaactacaatgtcacccaagtattatcc 12226  T

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Target: scaffold0047 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 63758 - 63793
Alignment:
Q  174 aaaatacttgggtgacatagagttaggtgacattgg 209  Q
    |||||||||||||||||||||||| |||||||||||    
T  63758 aaaatacttgggtgacatagagttgggtgacattgg 63793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 3015 - 2973
Alignment:
Q  181 ttgggtgacatagagttaggtgacattggtgacattggccaac 223  Q
    |||| |||||||||||| |||||||| ||||||||||||||||    
T  3015 ttggctgacatagagttgggtgacatcggtgacattggccaac 2973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 9302 - 9336
Alignment:
Q  199 ggtgacattggtgacattggccaaccacaatgtca 233  Q
    ||||||||||| |||||||||||||||||||||||    
T  9302 ggtgacattggcgacattggccaaccacaatgtca 9336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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