View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5637_high_1 (Length: 1068)

Name: NF5637_high_1
Description: NF5637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5637_high_1
NF5637_high_1
[»] chr6 (43 HSPs)
chr6 (17-490)||(10103541-10104015)
chr6 (172-489)||(10090241-10090556)
chr6 (682-880)||(10104208-10104397)
chr6 (901-1057)||(20242282-20242440)
chr6 (901-1057)||(22136266-22136424)
chr6 (895-1053)||(28051268-28051426)
chr6 (919-1049)||(33718974-33719104)
chr6 (895-1062)||(14482962-14483119)
chr6 (901-1055)||(34132490-34132644)
chr6 (555-619)||(10104080-10104144)
chr6 (893-982)||(2402172-2402261)
chr6 (172-294)||(10079584-10079707)
chr6 (901-983)||(20192290-20192372)
chr6 (901-983)||(22143619-22143701)
chr6 (397-454)||(10086425-10086482)
chr6 (924-1053)||(6205394-6205523)
chr6 (171-294)||(10083798-10083922)
chr6 (925-1021)||(14114979-14115075)
chr6 (172-294)||(10096237-10096360)
chr6 (1006-1049)||(18744219-18744262)
chr6 (925-1043)||(27640100-27640218)
chr6 (926-1043)||(801086-801203)
chr6 (924-1053)||(11692361-11692490)
chr6 (922-1022)||(32027796-32027896)
chr6 (922-1022)||(32037855-32037955)
chr6 (951-1053)||(3765918-3766020)
chr6 (925-1014)||(29066502-29066591)
chr6 (925-1014)||(29075515-29075604)
chr6 (926-974)||(18744157-18744205)
chr6 (925-1053)||(34803067-34803195)
chr6 (172-255)||(10072218-10072303)
chr6 (951-1053)||(13402443-13402545)
chr6 (925-1043)||(22305716-22305834)
chr6 (925-1043)||(29108060-29108178)
chr6 (384-453)||(10084057-10084130)
chr6 (1014-1062)||(17465538-17465586)
chr6 (951-1027)||(35060165-35060241)
chr6 (406-453)||(10079884-10079931)
chr6 (392-454)||(10102088-10102148)
chr6 (925-963)||(17465494-17465532)
chr6 (925-1014)||(29110486-29110576)
chr6 (555-614)||(10090600-10090656)
chr6 (384-454)||(10096512-10096586)
[»] chr2 (39 HSPs)
chr2 (895-1053)||(31992083-31992241)
chr2 (893-1053)||(18878414-18878574)
chr2 (895-1050)||(15891794-15891949)
chr2 (919-1053)||(27650598-27650732)
chr2 (925-1062)||(26617653-26617790)
chr2 (901-1062)||(11718645-11718807)
chr2 (901-1062)||(11679242-11679404)
chr2 (899-1049)||(18036310-18036460)
chr2 (924-1053)||(17424699-17424828)
chr2 (925-1022)||(20148059-20148156)
chr2 (925-1053)||(29906492-29906620)
chr2 (925-1052)||(42241267-42241394)
chr2 (925-1043)||(22493191-22493309)
chr2 (924-1053)||(3937231-3937360)
chr2 (926-1027)||(12968471-12968572)
chr2 (925-1022)||(27130677-27130774)
chr2 (925-1053)||(35491545-35491673)
chr2 (925-1043)||(10364805-10364923)
chr2 (925-1027)||(32734583-32734685)
chr2 (924-1053)||(40678782-40678911)
chr2 (924-1053)||(43982766-43982895)
chr2 (927-1027)||(5306652-5306752)
chr2 (925-1053)||(39800010-39800138)
chr2 (925-1043)||(19471802-19471920)
chr2 (925-1027)||(42119948-42120050)
chr2 (924-1053)||(16253386-16253515)
chr2 (925-1021)||(5420411-5420507)
chr2 (925-1053)||(34638876-34639003)
chr2 (925-1053)||(37312663-37312791)
chr2 (926-1053)||(16581732-16581859)
chr2 (951-1053)||(17796298-17796400)
chr2 (925-1043)||(39393811-39393929)
chr2 (925-1022)||(3941678-3941775)
chr2 (925-1022)||(10360367-10360464)
chr2 (925-1053)||(29067640-29067767)
chr2 (929-1019)||(34521856-34521945)
chr2 (925-1014)||(6901915-6902004)
chr2 (925-1022)||(6976779-6976876)
chr2 (951-1028)||(20529945-20530022)
[»] chr7 (35 HSPs)
chr7 (895-1051)||(18146869-18147025)
chr7 (901-1062)||(3380830-3380990)
chr7 (901-1049)||(28066158-28066306)
chr7 (919-1062)||(149978-150121)
chr7 (901-1062)||(12082821-12082982)
chr7 (905-1062)||(11824583-11824740)
chr7 (919-1062)||(27318001-27318144)
chr7 (925-1043)||(26603376-26603494)
chr7 (927-1039)||(8726391-8726503)
chr7 (925-1053)||(10522976-10523104)
chr7 (925-1053)||(40588457-40588585)
chr7 (924-1022)||(17183151-17183249)
chr7 (924-1053)||(20564667-20564796)
chr7 (925-1053)||(48220913-48221041)
chr7 (926-1052)||(20378875-20379001)
chr7 (925-1014)||(21187470-21187559)
chr7 (936-1053)||(30360425-30360542)
chr7 (924-1020)||(1642757-1642853)
chr7 (925-1053)||(28979193-28979321)
chr7 (925-1039)||(17839245-17839359)
chr7 (925-1019)||(42682898-42682992)
chr7 (925-1022)||(42735202-42735299)
chr7 (925-1022)||(48315351-48315448)
chr7 (951-1007)||(26926458-26926514)
chr7 (924-1020)||(36393994-36394090)
chr7 (925-1053)||(46862365-46862493)
chr7 (925-1053)||(48270556-48270684)
chr7 (928-991)||(3924782-3924845)
chr7 (951-1022)||(15338102-15338173)
chr7 (951-1028)||(7062164-7062241)
chr7 (925-1022)||(45363414-45363511)
chr7 (929-1053)||(18237472-18237596)
chr7 (925-1053)||(43351270-43351398)
chr7 (925-1020)||(13916775-13916869)
chr7 (983-1053)||(47268819-47268889)
[»] chr5 (39 HSPs)
chr5 (896-1050)||(25360738-25360892)
chr5 (919-1062)||(13131252-13131395)
chr5 (901-1051)||(18920632-18920782)
chr5 (895-1052)||(36312098-36312255)
chr5 (919-1053)||(15798258-15798392)
chr5 (933-1048)||(12067774-12067889)
chr5 (919-1062)||(17195535-17195678)
chr5 (896-1051)||(19747966-19748121)
chr5 (922-1053)||(2599124-2599255)
chr5 (926-1054)||(23228852-23228969)
chr5 (925-1022)||(1971301-1971398)
chr5 (925-1053)||(19400268-19400396)
chr5 (925-1043)||(12742630-12742748)
chr5 (925-1043)||(12805448-12805566)
chr5 (925-1027)||(40009459-40009561)
chr5 (925-1053)||(1400476-1400604)
chr5 (925-1053)||(8576315-8576443)
chr5 (925-1053)||(11346614-11346742)
chr5 (925-1053)||(28880896-28881024)
chr5 (925-1022)||(541809-541906)
chr5 (924-1053)||(19036847-19036976)
chr5 (925-1053)||(3458741-3458869)
chr5 (925-1053)||(11027682-11027810)
chr5 (925-1053)||(38854063-38854191)
chr5 (931-1053)||(6793566-6793688)
chr5 (925-1022)||(18308196-18308293)
chr5 (945-1022)||(33370590-33370667)
chr5 (925-1053)||(7403-7531)
chr5 (925-1053)||(4724248-4724376)
chr5 (925-1053)||(8537859-8537987)
chr5 (946-1022)||(17366930-17367006)
chr5 (925-1053)||(30709503-30709631)
chr5 (951-1053)||(27661577-27661679)
chr5 (925-1022)||(7082228-7082325)
chr5 (925-1053)||(3601246-3601374)
chr5 (951-1007)||(21290558-21290614)
chr5 (929-1053)||(35565177-35565301)
chr5 (926-1022)||(35927612-35927708)
chr5 (929-1028)||(37396635-37396731)
[»] chr4 (51 HSPs)
chr4 (903-1053)||(23124685-23124835)
chr4 (919-1062)||(17291850-17291993)
chr4 (922-1053)||(13866169-13866300)
chr4 (929-1053)||(4785599-4785723)
chr4 (930-1027)||(12227669-12227766)
chr4 (925-1026)||(18412528-18412629)
chr4 (937-1049)||(20759329-20759435)
chr4 (937-1049)||(20765720-20765826)
chr4 (925-1053)||(13850655-13850783)
chr4 (924-1053)||(242588-242717)
chr4 (924-1053)||(6177487-6177616)
chr4 (925-1022)||(17211203-17211300)
chr4 (925-1022)||(25762535-25762632)
chr4 (924-1053)||(41794734-41794863)
chr4 (924-1053)||(56138816-56138945)
chr4 (925-1053)||(3393210-3393338)
chr4 (925-1053)||(21017350-21017478)
chr4 (925-1053)||(44560353-44560481)
chr4 (925-1053)||(49792109-49792237)
chr4 (926-1053)||(21412699-21412826)
chr4 (925-1022)||(20901841-20901938)
chr4 (925-1022)||(22436848-22436945)
chr4 (925-1022)||(28082175-28082272)
chr4 (924-1053)||(32938074-32938203)
chr4 (925-1022)||(51027940-51028037)
chr4 (925-1053)||(1226066-1226193)
chr4 (925-1053)||(11288201-11288329)
chr4 (946-1052)||(10312179-10312285)
chr4 (951-1053)||(42886169-42886271)
chr4 (925-1022)||(20779042-20779139)
chr4 (925-1022)||(40353946-40354043)
chr4 (925-1022)||(43889672-43889769)
chr4 (925-1022)||(47657528-47657625)
chr4 (925-1022)||(51428365-51428462)
chr4 (925-1053)||(26591858-26591986)
chr4 (925-1053)||(31324080-31324208)
chr4 (925-1053)||(37866312-37866440)
chr4 (984-1048)||(42420948-42421012)
chr4 (951-1022)||(45939462-45939533)
chr4 (946-1020)||(957649-957723)
chr4 (925-1043)||(31824802-31824920)
chr4 (979-1053)||(33163771-33163845)
chr4 (951-1053)||(49423957-49424059)
chr4 (951-1024)||(24075039-24075112)
chr4 (925-1022)||(34529969-34530066)
chr4 (924-1053)||(49094651-49094780)
chr4 (925-1053)||(9489585-9489713)
chr4 (925-1053)||(36776692-36776820)
chr4 (951-1053)||(1042657-1042759)
chr4 (925-1043)||(2772925-2773043)
chr4 (924-1022)||(14330866-14330964)
[»] chr1 (47 HSPs)
chr1 (919-1051)||(14772707-14772838)
chr1 (921-1062)||(48707086-48707227)
chr1 (901-1053)||(31451900-31452051)
chr1 (896-1047)||(15471430-15471581)
chr1 (944-1062)||(19262568-19262688)
chr1 (925-1022)||(5765143-5765240)
chr1 (925-1053)||(18842345-18842473)
chr1 (925-1022)||(29762393-29762490)
chr1 (925-1053)||(36909467-36909595)
chr1 (925-1053)||(38046606-38046734)
chr1 (925-1053)||(47488209-47488337)
chr1 (925-1019)||(16098104-16098198)
chr1 (924-1022)||(24270534-24270632)
chr1 (926-1043)||(41875057-41875174)
chr1 (924-1053)||(50068430-50068559)
chr1 (925-1053)||(13283612-13283739)
chr1 (925-1053)||(19160223-19160351)
chr1 (926-1053)||(17696952-17697079)
chr1 (925-1043)||(17372643-17372761)
chr1 (925-1019)||(27035490-27035584)
chr1 (925-1019)||(29435913-29436007)
chr1 (925-1019)||(35587101-35587195)
chr1 (925-1022)||(41780630-41780727)
chr1 (925-1022)||(44337491-44337588)
chr1 (925-1022)||(44597638-44597735)
chr1 (925-1022)||(51269739-51269836)
chr1 (951-1022)||(4209188-4209259)
chr1 (925-1043)||(13635469-13635587)
chr1 (925-1043)||(14173930-14174048)
chr1 (925-1043)||(35526349-35526467)
chr1 (951-1053)||(37777998-37778100)
chr1 (926-1020)||(42571949-42572043)
chr1 (946-1040)||(45689040-45689134)
chr1 (929-974)||(22529708-22529753)
chr1 (936-1053)||(46181735-46181852)
chr1 (924-1013)||(49599045-49599134)
chr1 (925-1053)||(6435678-6435806)
chr1 (955-1019)||(13148231-13148295)
chr1 (927-1027)||(26793236-26793336)
chr1 (925-1053)||(35184876-35185004)
chr1 (925-993)||(35576305-35576373)
chr1 (925-1019)||(12791445-12791539)
chr1 (925-1019)||(23342581-23342675)
chr1 (952-1022)||(27486889-27486959)
chr1 (924-1022)||(30309997-30310095)
chr1 (925-1043)||(49396620-49396738)
chr1 (929-1022)||(39224373-39224466)
[»] scaffold0121 (1 HSPs)
scaffold0121 (901-1051)||(5250-5400)
[»] chr3 (53 HSPs)
chr3 (917-1062)||(17267464-17267609)
chr3 (925-1053)||(49218907-49219035)
chr3 (925-1053)||(49273319-49273447)
chr3 (925-1022)||(8633530-8633627)
chr3 (925-1022)||(44927414-44927511)
chr3 (924-1053)||(46402923-46403052)
chr3 (924-1053)||(49140224-49140353)
chr3 (924-1053)||(54390362-54390491)
chr3 (927-1027)||(4095743-4095843)
chr3 (926-1022)||(27186899-27186995)
chr3 (925-1053)||(51695777-51695905)
chr3 (951-1053)||(42382971-42383073)
chr3 (925-1022)||(10053442-10053539)
chr3 (924-1053)||(42382191-42382320)
chr3 (926-1043)||(53826868-53826985)
chr3 (925-1053)||(13896041-13896169)
chr3 (925-1053)||(14265328-14265456)
chr3 (956-1052)||(20378089-20378185)
chr3 (925-1053)||(36134928-36135056)
chr3 (945-1053)||(44835678-44835786)
chr3 (925-1053)||(46414505-46414633)
chr3 (925-1053)||(47065607-47065735)
chr3 (925-1053)||(49610409-49610537)
chr3 (925-1053)||(51013449-51013577)
chr3 (925-1043)||(39417119-39417237)
chr3 (925-1043)||(43569840-43569958)
chr3 (925-1022)||(2428438-2428535)
chr3 (936-1053)||(4004269-4004386)
chr3 (925-1022)||(11378915-11379012)
chr3 (925-1022)||(14631396-14631493)
chr3 (924-1053)||(34049647-34049776)
chr3 (925-1022)||(34472247-34472344)
chr3 (925-1053)||(3495200-3495328)
chr3 (928-1028)||(29635077-29635177)
chr3 (925-1053)||(51015197-51015325)
chr3 (924-1022)||(7954154-7954252)
chr3 (925-1019)||(30192492-30192586)
chr3 (945-1022)||(33449330-33449407)
chr3 (925-1022)||(34647438-34647535)
chr3 (925-1053)||(24702442-24702570)
chr3 (925-1053)||(34693461-34693588)
chr3 (925-1053)||(41803823-41803950)
chr3 (926-1022)||(42328288-42328384)
chr3 (925-1053)||(46346751-46346874)
chr3 (925-1052)||(2268665-2268792)
chr3 (928-994)||(17370776-17370843)
chr3 (926-1053)||(19453401-19453528)
chr3 (925-1012)||(25576762-25576849)
chr3 (925-1043)||(2647047-2647165)
chr3 (925-1043)||(48087723-48087841)
chr3 (981-1043)||(55207102-55207164)
chr3 (925-1022)||(52569579-52569676)
chr3 (954-1027)||(55390976-55391049)
[»] chr8 (29 HSPs)
chr8 (893-1048)||(12504862-12505017)
chr8 (925-1053)||(31171986-31172114)
chr8 (927-1022)||(22843495-22843590)
chr8 (925-1053)||(28706312-28706440)
chr8 (925-1022)||(34614900-34614997)
chr8 (925-1053)||(24861259-24861387)
chr8 (925-1043)||(16575618-16575736)
chr8 (925-1027)||(43638847-43638948)
chr8 (924-1053)||(485427-485556)
chr8 (922-1019)||(12785368-12785465)
chr8 (925-1022)||(19242332-19242429)
chr8 (925-1022)||(19315516-19315613)
chr8 (922-1053)||(2416831-2416962)
chr8 (951-1022)||(41363603-41363674)
chr8 (925-1063)||(26140059-26140197)
chr8 (925-1022)||(15032494-15032591)
chr8 (925-1022)||(38034095-38034192)
chr8 (926-1043)||(42603380-42603497)
chr8 (925-1053)||(18440465-18440593)
chr8 (925-1053)||(26452241-26452369)
chr8 (925-1053)||(40702276-40702404)
chr8 (925-1022)||(22548210-22548307)
chr8 (978-1043)||(33799774-33799839)
chr8 (925-1040)||(40415186-40415301)
chr8 (929-1020)||(41275343-41275434)
chr8 (925-1027)||(42169130-42169232)
chr8 (925-1019)||(43693087-43693181)
chr8 (1002-1063)||(26139953-26140014)
chr8 (925-1022)||(26484524-26484621)
[»] scaffold0027 (1 HSPs)
scaffold0027 (928-1062)||(36554-36688)
[»] scaffold0589 (1 HSPs)
scaffold0589 (925-1022)||(2206-2303)
[»] scaffold0181 (1 HSPs)
scaffold0181 (936-1022)||(24844-24930)
[»] scaffold0004 (1 HSPs)
scaffold0004 (951-1020)||(63917-63986)


Alignment Details
Target: chr6 (Bit Score: 381; Significance: 0; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 17 - 490
Target Start/End: Original strand, 10103541 - 10104015
Alignment:
Q  17 cttccaaagtggcatgtaaggatagtttaaataatgtaatttatccgaccaatttcactgaaataatctacatttaaagatgnnnnnnn-tgttatcaat 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||        || ||| |||    
T  10103541 cttccaaagtggcatgtaaggatagttcaaataatgtaatttatccgaccaatttcactgaaataatctacatttaaagatgaaaaaaaatgctatgaat 10103640  T
Q  116 gcatttttatatctccaagatgtagactttattttccagggagaaaaggtctgacaaatttcatcgctttgaactattataatctatacaatattaattc 215  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10103641 gcatttttatatctccaagatgtagactctattttctagtgagaaaaggtctgacaaatttcatcgctttgaactaatataatctatacaatattaattc 10103740  T
Q  216 atctcttccccataagagctacgtaacttccaagatctagctaatgagatattgtctaagagtgtatgagtgtttatgatcatctgagtgcnnnnnnnaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||        ||    
T  10103741 atctcttccccataagagctacgtaacttccaagatctagctaatgagatattgtctaagagtgtatgagtgtttatgatcatctgactgttttttttaa 10103840  T
Q  316 gagtgtttctttggatatttgagagaaaatatattagagttaaaattagagagaagggatatgaaatgaaaagcaaagaagagaggaggaatgaatgaat 415  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10103841 gagtgtttctttggatatttgagagaaaaaatattagagttaaaattagagagaagggatatgaaatgaaaagcaaagaagagaggaggaatgaatgaat 10103940  T
Q  416 ggaaagtgagggctgtgagtgactcaatttatagacaagctagaaacatgaaacatatttcaaacaaacttatag 490  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10103941 ggaaagtgagggttgtgagtgactcaatttatagacaagctagaaacatgaaacatatttcaaacaaacttatag 10104015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 172 - 489
Target Start/End: Original strand, 10090241 - 10090556
Alignment:
Q  172 aatttcatcgctttgaac-tattataatctatacaatattaattcatctcttccccataagagctacgtaacttccaagatctagctaatgagatattgt 270  Q
    |||||||||||||||||| || ||||| || || |||||| |||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  10090241 aatttcatcgctttgaacctaatataacctgta-aatattgattcatatcttccccataagagctaggtaacttccaagatctagataatgagatattgt 10090339  T
Q  271 ctaagagtgtatgagtgtttatgatcatctgagtgcnnnnnnnaagagtgtttctttggatatttgagagaaaatatattagagttaaaattagagagaa 370  Q
     ||||||||||||| ||||| ||| ||| | | ||         ||||||||||||||||| |||||||| ||| ||| | |||||||||||||||||||    
T  10090340 ttaagagtgtatgaatgtttgtgagcattttaatgttttttt--agagtgtttctttggatgtttgagaggaaaaataatggagttaaaattagagagaa 10090437  T
Q  371 gggatatgaaatgaaaagcaaagaagagaggaggaatgaatgaatggaaagtgagggctgtgagtgactcaatttatagacaagctagaaacatgaaaca 470  Q
    |||||||||||||||| |||||||| | |||||||||||||||| ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  10090438 gggatatgaaatgaaatgcaaagaaaacaggaggaatgaatgaagggaaaatgagggttgtgaatgactcaatttatagacaagctagaaacatgaaaca 10090537  T
Q  471 tatttcaaacaaacttata 489  Q
    || || |||||||||||||    
T  10090538 tactttaaacaaacttata 10090556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 149; E-Value: 4e-78
Query Start/End: Original strand, 682 - 880
Target Start/End: Original strand, 10104208 - 10104397
Alignment:
Q  682 catagttgaagaaaagattcatttgcatgtgttgttgttgttgatgtttaattgtcagcatctattgaacccctcgttgacatgggcggacatgggcgat 781  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||          ||||||||    
T  10104208 catagttgaagaaaagattcatttgcatgtgttgttgttgttgatgtttaattgtcagcatctattgaacccctaattgaca----------tgggcgat 10104297  T
Q  782 ggagcacgtgcatagacaccacccccactgatggagaaggactcaacgcggtctgtgacggacgacgaaagctcaataacaacata-tatcaatccaaca 880  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10104298 ggagcacgtgcatagacaccacccccactgatggagaaggactcaacgcggtctgtgacggacgacgaaagctcaataacaacatattatcaatccaaca 10104397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 901 - 1057
Target Start/End: Original strand, 20242282 - 20242440
Alignment:
Q  901 aacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagtt 1000  Q
    ||||||||||| | | | ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  20242282 aacgttattctcctgtcgtccaacgttggacgttcataccaaatgtatttcactctccttgtgtctccggggttgagtccttggttgatttcatccagtt 20242381  T
Q  1001 aatcctt--gagaccttttaacgtgacattaatgtaccgaaccttgaacatctgatgat 1057  Q
     ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20242382 gatccttgagagaccttttaacgtgacattaatgtaccgaaccttgaacatctgatgat 20242440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 901 - 1057
Target Start/End: Original strand, 22136266 - 22136424
Alignment:
Q  901 aacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagtt 1000  Q
    ||||||||||| | | | ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  22136266 aacgttattctcctgtcgtccaacgttggacgttcataccaaatgtatttcactctccttgtgtctccggggttgagtccttggttgatttcatccagtt 22136365  T
Q  1001 aatcctt--gagaccttttaacgtgacattaatgtaccgaaccttgaacatctgatgat 1057  Q
     ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22136366 gatccttgagagaccttttaacgtgacattaatgtaccgaaccttgaacatctgatgat 22136424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 895 - 1053
Target Start/End: Complemental strand, 28051426 - 28051268
Alignment:
Q  895 cgacttaacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcat 994  Q
    ||||| ||||||||||| ||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||    
T  28051426 cgactgaacgttattctcccgtcgtccaacgttggacgttcataccaaatgtatttcaccctccttgtgtctccggggttgagttcatggttgatttcat 28051327  T
Q  995 ccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctga 1053  Q
    | |||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  28051326 caagttgatccttaagaccttttaacgtgacattaatgtaccgaactttgaacatctga 28051268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 919 - 1049
Target Start/End: Complemental strand, 33719104 - 33718974
Alignment:
Q  919 tccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacctttta 1018  Q
    ||||| |||||||||||||||||||||||||||||| ||||| | ||||| ||||| | ||||| ||||||||| || |||| ||| ||||||||| |||    
T  33719104 tccaacgttggacgttcataccaaatgtatttcaccttccttatatctccggggttgattccttagttgatttcctctagttgatcgttgagacctctta 33719005  T
Q  1019 acgtgacattaatgtaccgaaccttgaacat 1049  Q
    ||||||||||||||||||||||| |||||||    
T  33719004 acgtgacattaatgtaccgaaccatgaacat 33718974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 895 - 1062
Target Start/End: Original strand, 14482962 - 14483119
Alignment:
Q  895 cgacttaacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcat 994  Q
    ||||| ||| ||||||||||| | |||||  ||||||||||||||||||||||||||||| |||           ||||| | | | |||||||||||||    
T  14482962 cgactgaacattattcttccgtcgtccaacattggacgttcataccaaatgtatttcaccatccg----------gggttgatttcctggttgatttcat 14483051  T
Q  995 ccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||    
T  14483052 ccagttgatccttgagaccttttaacgtgacattaatgtaccgaaacttgaacatctgaggatttcca 14483119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 901 - 1055
Target Start/End: Complemental strand, 34132644 - 34132490
Alignment:
Q  901 aacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagtt 1000  Q
    ||||||||||| |||   ||||| |||||||||| |||||||||  |||||||| ||||| | || |  ||||| |||||||| |||||||||||||| |    
T  34132644 aacgttattctcccgtagtccaacgttggacgtttataccaaatacatttcaccttccttttttcactggggttgagtccttgattgatttcatccagat 34132545  T
Q  1001 aatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctgatg 1055  Q
     |||||||||| |||||||||||||||| ||||| | ||||||||||||||||||    
T  34132544 gatccttgagatcttttaacgtgacattgatgtatcaaaccttgaacatctgatg 34132490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 555 - 619
Target Start/End: Original strand, 10104080 - 10104144
Alignment:
Q  555 cttcacacgccaaagatgaatgtgaaaaagtatggtgtgtgctttgtttgttagagatgaagcac 619  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10104080 cttcacacgccaaagatgaatgtgaaaaagtatggtgtgtgctttgtttgttagagatgaagcac 10104144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 893 - 982
Target Start/End: Complemental strand, 2402261 - 2402172
Alignment:
Q  893 gtcgacttaacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtcctt 982  Q
    ||||||| ||||||||||| ||| | ||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||    
T  2402261 gtcgactgaacgttattctcccgtcgtccaacgttggacgttcataccaaatgtattccaccctccgtgtgtctccggggttgagtcctt 2402172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 10079584 - 10079707
Alignment:
Q  172 aatttcatcgctttgaactattataatctat-acaatattaattcatctcttccccataagagctacgtaacttccaagatctagctaatgagatattgt 270  Q
    ||||||||||| |||||||| |||||||||| ||||||| |||||||||||| |||||||||| || || ||||| |||||||||  || | ||  ||||    
T  10079584 aatttcatcgcattgaactaatataatctattacaatataaattcatctctttcccataagagttaggtgacttctaagatctagagaacgggaacttgt 10079683  T
Q  271 ctaagagtgtatgagtgtttatga 294  Q
     | |||||||||||||||||||||    
T  10079684 ttgagagtgtatgagtgtttatga 10079707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 901 - 983
Target Start/End: Complemental strand, 20192372 - 20192290
Alignment:
Q  901 aacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttg 983  Q
    ||||||||||| | | | ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  20192372 aacgttattctcctgtcgtccaacgttggacgttcataccaaatgtatttcactctccttgtgtctccggggttgagtccttg 20192290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 901 - 983
Target Start/End: Original strand, 22143619 - 22143701
Alignment:
Q  901 aacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttg 983  Q
    ||||||||||| | | | ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  22143619 aacgttattctcctgtcgtccaacgttggacgttcataccaaatgtatttcactctccttgtgtctccggggttgagtccttg 22143701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 10086425 - 10086482
Alignment:
Q  397 agaggaggaatgaatgaatggaaagtgagggctgtgagtgactcaatttatagacaag 454  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  10086425 agaggaggaatgaatgaatggaaagtgaggattgtgagtgactcaatttatagacaag 10086482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 924 - 1053
Target Start/End: Complemental strand, 6205523 - 6205394
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||  ||||||||||||| |||||||     
T  6205523 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagtgtatccttgagacctcttaacgtt 6205424  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  6205423 acaccaaggcaccgaaccttcaacctctga 6205394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 10083798 - 10083922
Alignment:
Q  171 aaatttcatcgctttgaactattataatctat-acaatattaattcatctcttccccataagagctacgtaacttccaagatctagctaatgagatattg 269  Q
    |||||||||||| |||||||| |||||||||| ||||||| |||| |||||||||  ||| |||||| |||||||| ||||||| |  |||||||  |||    
T  10083798 aaatttcatcgcattgaactaatataatctattacaatataaatttatctcttccatatacgagctatgtaacttctaagatctggagaatgagaacttg 10083897  T
Q  270 tctaagagtgtatgagtgtttatga 294  Q
    | | |||||||||||| || |||||    
T  10083898 tttgagagtgtatgagggtgtatga 10083922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1021
Target Start/End: Complemental strand, 14115075 - 14114979
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacg 1021  Q
    |||||||||| ||||  || || || ||||||||||||||||||  |||| | ||||||||||| ||||||||||| ||||||||||||| ||||||    
T  14115075 gttggacgtttatactgaacgttttgcaccctccttgtgtctccgaggttgactccttggttgaattcatccagttcatccttgagacctcttaacg 14114979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 10096237 - 10096360
Alignment:
Q  172 aatttcatcgctttgaactattataatctat-acaatattaattcatctcttccccataagagctacgtaacttccaagatctagctaatgagatattgt 270  Q
    ||||||| ||| |||||||| |||||||||| ||| ||| |||||||||||| ||||||||| |||  | ||||| |||||||||  |||||||  ||||    
T  10096237 aatttcaacgcattgaactaatataatctattacattataaattcatctctttcccataagaactagatgacttctaagatctagagaatgagaacttgt 10096336  T
Q  271 ctaagagtgtatgagtgtttatga 294  Q
     | |||||||||||| ||||||||    
T  10096337 ttgagagtgtatgagggtttatga 10096360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1006 - 1049
Target Start/End: Original strand, 18744219 - 18744262
Alignment:
Q  1006 ttgagaccttttaacgtgacattaatgtaccgaaccttgaacat 1049  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18744219 ttgagaccttttaacgtgacattaatgtaccgaaccttgaacat 18744262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 925 - 1043
Target Start/End: Complemental strand, 27640218 - 27640100
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||||||||| || |||| ||||||||||||  ||||| | ||||||||||| ||||   |||| ||||||||||||| ||||||| |    
T  27640218 gttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtgagtttatccttgagacctcttaacgtta 27640119  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || | ||||||||||    
T  27640118 caccaaggcaccgaacctt 27640100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 926 - 1043
Target Start/End: Complemental strand, 801203 - 801086
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgac 1025  Q
    ||||||||| |||||||| ||||| |||||||||||||||||  ||||  | | || |||||| ||||  ||||| ||||||||||||| ||||||| ||    
T  801203 ttggacgtttataccaaacgtattccaccctccttgtgtctctggggtcgacttctcggttgaattcactcagttgatccttgagacctcttaacgttac 801104  T
Q  1026 attaatgtaccgaacctt 1043  Q
    || || | ||||||||||    
T  801103 atcaaggcaccgaacctt 801086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 924 - 1053
Target Start/End: Complemental strand, 11692490 - 11692361
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  ||||| | ||||||||||| || |  ||||  ||||||||||||| |||||||     
T  11692490 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctcgggttgactccttggttgaatttagtcagtgtatccttgagacctcttaacgtt 11692391  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  11692390 acaccaaggcaccgaaccttcaacctctga 11692361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 922 - 1022
Target Start/End: Original strand, 32027796 - 32027896
Alignment:
Q  922 aatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacg 1021  Q
    ||||||||||||| ||||| || || ||  ||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||    
T  32027796 aatgttggacgtttataccgaacgtgttcaaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacg 32027895  T
Q  1022 t 1022  Q
    |    
T  32027896 t 32027896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 922 - 1022
Target Start/End: Original strand, 32037855 - 32037955
Alignment:
Q  922 aatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacg 1021  Q
    ||||||||||||| ||||| || || ||  ||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||    
T  32037855 aatgttggacgtttataccgaacgtgttcaaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacg 32037954  T
Q  1022 t 1022  Q
    |    
T  32037955 t 32037955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 951 - 1053
Target Start/End: Original strand, 3765918 - 3766020
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatc 1050  Q
    |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |||  || | |||||||||| ||| ||    
T  3765918 caccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgttacaccaaggcaccgaaccttcaacctc 3766017  T
Q  1051 tga 1053  Q
    |||    
T  3766018 tga 3766020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1014
Target Start/End: Complemental strand, 29066591 - 29066502
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacct 1014  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| |||||||||||||    
T  29066591 gttggacgtttataccgaaggtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacct 29066502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1014
Target Start/End: Complemental strand, 29075604 - 29075515
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacct 1014  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| |||||||||||||    
T  29075604 gttggacgtttataccgaaggtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacct 29075515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 926 - 974
Target Start/End: Original strand, 18744157 - 18744205
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggtt 974  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  18744157 ttggacgttcgtaccaaatgtattccaccctccttgtgtctccggggtt 18744205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 34803067 - 34803195
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||  || || | ||||||||||| ||||  ||||| |||||| |||||| ||||||| |    
T  34803067 gttggacgtttataccgaacgtgttccaccctccttgtgtctctgggattgactccttggttgaattcagtcagttcatccttaagacctcttaacgtta 34803166  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  34803167 caccaaggcaccgaaccttcaacctctga 34803195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 255
Target Start/End: Original strand, 10072218 - 10072303
Alignment:
Q  172 aatttcatcgctttgaactattataatctatacaa--tattaattcatctcttccccataagagctacgtaacttccaagatctag 255  Q
    |||||||||| ||||||||| ||  ||||||||||  ||||||||||| |||| | ||||||||||| |||| |||| ||||||||    
T  10072218 aatttcatcgttttgaactaataatatctatacaaaatattaattcatgtctttctcataagagctaggtaaattccgagatctag 10072303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 951 - 1053
Target Start/End: Complemental strand, 13402545 - 13402443
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatc 1050  Q
    |||||||||||||||||  ||||| | || |||||||| ||||  ||||| ||||||||||||| ||||||| |||  || ||||| |||||| ||| ||    
T  13402545 caccctccttgtgtctctggggttgactctttggttgaattcagtcagttcatccttgagacctcttaacgttacaccaaggtacctaaccttcaacctc 13402446  T
Q  1051 tga 1053  Q
    |||    
T  13402445 tga 13402443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 925 - 1043
Target Start/End: Complemental strand, 22305834 - 22305716
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| |||||||||||   ||||| | ||||||||||| ||||  ||||| ||| ||||||||| ||||||| |    
T  22305834 gttggacgtttataccaaacgtgttccaccatccttgtgtctttggggttgactccttggttgaattcagtcagtttatctttgagacctcttaacgtta 22305735  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || | ||||||||||    
T  22305734 caccaaggcaccgaacctt 22305716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 925 - 1043
Target Start/End: Complemental strand, 29108178 - 29108060
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||| | || || |||||||||||||||||  ||||| | ||||||||| | ||||  ||||| ||||||||||||| ||| ||| |    
T  29108178 gttggacgtttataccacaggtgttccaccctccttgtgtctctggggttgactccttggttaaattcagtcagttcatccttgagacctcttagcgtta 29108079  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || | ||||||||||    
T  29108078 caccaaggcaccgaacctt 29108060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 384 - 453
Target Start/End: Original strand, 10084057 - 10084130
Alignment:
Q  384 aaaagcaaagaagagaggagga----atgaatgaatggaaagtgagggctgtgagtgactcaatttatagacaa 453  Q
    ||||||||||||||||||||||    ||||||||||||||| |  | | ||||| |||||||||||||||||||    
T  10084057 aaaagcaaagaagagaggaggagtggatgaatgaatggaaaatttgagttgtgactgactcaatttatagacaa 10084130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1014 - 1062
Target Start/End: Original strand, 17465538 - 17465586
Alignment:
Q  1014 ttttaacgtgacattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
    |||||||||| |||||||||| |||||||||||||||||| ||| ||||    
T  17465538 ttttaacgtgccattaatgtaacgaaccttgaacatctgaggatttcca 17465586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 951 - 1027
Target Start/End: Original strand, 35060165 - 35060241
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacat 1027  Q
    ||||||||||| |||||  ||||| | || |||||||| ||||| ||||| ||||||||||||| ||||||| ||||    
T  35060165 caccctccttgcgtctctggggttaactcgttggttgaattcattcagttgatccttgagacctcttaacgttacat 35060241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 10079884 - 10079931
Alignment:
Q  406 atgaatgaatggaaagtgagggctgtgagtgactcaatttatagacaa 453  Q
    ||||||||||||||| || ||| ||||| |||||||||||||||||||    
T  10079884 atgaatgaatggaaaatgtgggttgtgactgactcaatttatagacaa 10079931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 454
Target Start/End: Original strand, 10102088 - 10102148
Alignment:
Q  392 agaagagaggaggaatgaatgaatggaaagtgagggctgtgagtgactcaatttatagacaag 454  Q
    ||||||||||||| ||| |||||||||||||||| ||||||| |||  |||||||| ||||||    
T  10102088 agaagagaggagggatggatgaatggaaagtgagagctgtgattga--caatttattgacaag 10102148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 925 - 963
Target Start/End: Original strand, 17465494 - 17465532
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtg 963  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  17465494 gttggacgttcataacaaatgtatttcactctccttgtg 17465532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 925 - 1014
Target Start/End: Complemental strand, 29110576 - 29110486
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccc-tccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacct 1014  Q
    |||||||||| ||||| || || || ||||| ||||||||||||  ||||| | ||||||||||| ||||  ||||| |||||||||||||    
T  29110576 gttggacgtttataccgaaggtgttccacccatccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacct 29110486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 614
Target Start/End: Original strand, 10090600 - 10090656
Alignment:
Q  555 cttcacacgccaaagatgaatgtgaaaaagtatggtgtgtgctttgtttgttagagatga 614  Q
    ||||| ||||||||||||||||||||| ||||| |||||    |||||||||||||||||    
T  10090600 cttcagacgccaaagatgaatgtgaaatagtatagtgtg---cttgtttgttagagatga 10090656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 384 - 454
Target Start/End: Original strand, 10096512 - 10096586
Alignment:
Q  384 aaaagcaaagaagagaggagga----atgaatgaatggaaagtgagggctgtgagtgactcaatttatagacaag 454  Q
    ||||||||||||||||||||||    ||||||||||||||| || | | ||| | ||||| ||||||||||||||    
T  10096512 aaaagcaaagaagagaggaggagtggatgaatgaatggaaaatgtgagttgtaactgactgaatttatagacaag 10096586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 7e-58; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 895 - 1053
Target Start/End: Original strand, 31992083 - 31992241
Alignment:
Q  895 cgacttaacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcat 994  Q
    ||||||||||||||||| ||| | |||||  ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  31992083 cgacttaacgttattctcccgtcgtccaacattggacgttcataccaaatgtatttcaccctccttgtgtctccggggttgagtccttggttgatttcat 31992182  T
Q  995 ccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctga 1053  Q
    | |||| |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  31992183 ctagttgatccttgagaccttttaacgtgacattaatgtaccgaactgtgaacatctga 31992241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 893 - 1053
Target Start/End: Complemental strand, 18878574 - 18878414
Alignment:
Q  893 gtcgacttaacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttc 992  Q
    ||||||| ||||||||||| | | | ||||| ||||||||||||||||||||||||| | |||||||||||||||| ||||| |||||||||||||||||    
T  18878574 gtcgactgaacgttattctcctgtcgtccaacgttggacgttcataccaaatgtattcccccctccttgtgtctccggggttgagtccttggttgatttc 18878475  T
Q  993 atccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctga 1053  Q
    ||| |||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  18878474 atctagttgatccttaagaccttttaacgtgacattaatttaccgaaccttgaacatctga 18878414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 895 - 1050
Target Start/End: Original strand, 15891794 - 15891949
Alignment:
Q  895 cgacttaacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcat 994  Q
    ||||| |||||||||||  || | |||||||||| |||||||||||||||||||| |||||||| |||||||| |||||| ||| ||| |||||||||||    
T  15891794 cgactgaacgttattctctcgtcgtccaatgttgaacgttcataccaaatgtattccaccctccgtgtgtctctagggttgagttctttgttgatttcat 15891893  T
Q  995 ccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatc 1050  Q
    |||||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  15891894 ccagttgattcttgagaccttttaccgtgacattaatgtaccgaaccttgaacatc 15891949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 919 - 1053
Target Start/End: Original strand, 27650598 - 27650732
Alignment:
Q  919 tccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacctttta 1018  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||| || || | |||||||||||||||| |||||| ||| |||||||| ||||    
T  27650598 tccaacgttggacgttcataccaaatgtatttcaccctctttgtgtctccgggattgaatccttggttgatttcacccagttgatcattgagaccattta 27650697  T
Q  1019 acgtgacattaatgtaccgaaccttgaacatctga 1053  Q
    |||||||||||||||||||||||||||||||||||    
T  27650698 acgtgacattaatgtaccgaaccttgaacatctga 27650732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 925 - 1062
Target Start/End: Original strand, 26617653 - 26617790
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    ||||||||||||||||||| ||||| |||||||||||||||||  | ||| |||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  26617653 gttggacgttcataccaaacgtattccaccctccttgtgtctctggagttgagtcattggttgatttcatttagttaatccttgagaccttttaacgtga 26617752  T
Q  1025 cattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
    |||||||||||||||||||||||| |||| ||| ||||    
T  26617753 cattaatgtaccgaaccttgaacaactgaggatttcca 26617790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 901 - 1062
Target Start/End: Complemental strand, 11718807 - 11718645
Alignment:
Q  901 aacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagtt 1000  Q
    ||||||||||| ||  | ||||| | ||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||||||| |||||    
T  11718807 aacgttattctcccatcgtccaacgctggacgttcataccaaatgtattccaccctccttgtgtctccggggttgagtccatggttgatttcatgcagtt 11718708  T
Q  1001 aatccttgagaccttttaac-gtgacattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
     ||| |||||||||||||||  |||||||||||||||||||||||||||| ||| ||| ||||    
T  11718707 gatcattgagaccttttaacaatgacattaatgtaccgaaccttgaacatttgaggatttcca 11718645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 901 - 1062
Target Start/End: Original strand, 11679242 - 11679404
Alignment:
Q  901 aacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagtt 1000  Q
    ||||||||||| ||  | ||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| |||||||| |||| |||||    
T  11679242 aacgttattctcccatcgtccaacgttggacgttcataccaaatgtattccaccctccttgtgtctccggggttgagtccatggttgatctcatgcagtt 11679341  T
Q  1001 aatccttgagaccttttaac-gtgacattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
     ||| |||||| ||||||||  |||||||||||||||||||||||||||| ||| ||| ||||    
T  11679342 gatcattgagatcttttaacaatgacattaatgtaccgaaccttgaacatttgaggatttcca 11679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 899 - 1049
Target Start/End: Original strand, 18036310 - 18036460
Alignment:
Q  899 ttaacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccag 998  Q
    ||||||||||||| | | | || || ||||||| |||||||||||||||||||||||||||||||||| | ||||| ||||||||||  |||||||||||    
T  18036310 ttaacgttattctcctgtcgtcaaacgttggacattcataccaaatgtatttcaccctccttgtgtcttcggggttgagtccttggtgaatttcatccag 18036409  T
Q  999 ttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacat 1049  Q
    || ||||||||||||||||||| |||||||  |||||| ||||||||||||    
T  18036410 ttgatccttgagaccttttaacatgacattgttgtaccaaaccttgaacat 18036460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 924 - 1053
Target Start/End: Complemental strand, 17424828 - 17424699
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| |||||||||||| |||||| | ||||||||||| ||||  ||||  ||||||||||||| |||||||     
T  17424828 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctagggttgactccttggttgaattcagtcagtgtatccttgagacctcttaacgtt 17424729  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  17424728 acaccaaggcaccgaaccttaaacctctga 17424699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 20148156 - 20148059
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| ||  ||||||||||||||||||||||| ||||| | ||||||||||| ||||| || || ||||||||||||| |||||||    
T  20148156 gttggacgtttataccgaacatatttcaccctccttgtgtctccggggttgactccttggttgaattcattcatttcatccttgagacctcttaacgt 20148059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 29906620 - 29906492
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| |||||||||||  ||||  ||||| | ||||||||||| ||||| ||||| ||||||||||||| ||||||| |    
T  29906620 gttggacgtttataccgaacgtattccaccctccttgcatctctggggttgactccttggttgaattcattcagttgatccttgagacctcttaacgtta 29906521  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||| || | |||||||||| ||| |||||    
T  29906520 catcaaggcaccgaaccttcaacctctga 29906492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 925 - 1052
Target Start/End: Original strand, 42241267 - 42241394
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||  ||||| | ||||||||||| ||||   |||| |||||| |||||| ||||||| |    
T  42241267 gttggacgtttataccgaatgtgtttcaccctccttgtgtctctggggttgactccttggttgaattcagtgagtttatcctttagacctcttaacgtta 42241366  T
Q  1025 cattaatgtaccgaaccttgaacatctg 1052  Q
    || ||| | |||||||||| ||| ||||    
T  42241367 cactaaggcaccgaaccttcaacctctg 42241394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 925 - 1043
Target Start/End: Complemental strand, 22493309 - 22493191
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| ||||||||||| |||||  ||||| | ||||||||||| ||||| ||||| ||| ||||||||| ||||||| |    
T  22493309 gttggacgtttataccgaacgtattccaccctccttgcgtctctggggttgactccttggttgaattcattcagttgatctttgagacctcttaacgtta 22493210  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||| || | ||||||||||    
T  22493209 catcaaggcaccgaacctt 22493191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 924 - 1053
Target Start/End: Original strand, 3937231 - 3937360
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||  ||||||||||||| |||||||     
T  3937231 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagtgtatccttgagacctcttaacgtt 3937330  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  3937331 acaccaaggcaccgaaccttcaacctctga 3937360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 926 - 1027
Target Start/End: Original strand, 12968471 - 12968572
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgac 1025  Q
    ||||||||| ||||| || ||||| |||||||||||||||||  ||||| | ||||||||||| ||||| ||||| |||||| |||||| ||||||| ||    
T  12968471 ttggacgtttataccgaacgtattccaccctccttgtgtctctggggttgactccttggttgaattcattcagttgatccttaagacctcttaacgttac 12968570  T
Q  1026 at 1027  Q
    ||    
T  12968571 at 12968572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 27130677 - 27130774
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| ||||| || ||||||||||||||||||  |||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  27130677 gttggacgtttataccgaatgtgttccaccctccttgtgtctccgaggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 27130774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 35491673 - 35491545
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  35491673 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgtta 35491574  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  35491573 caccaaggcaccgaaccttcaacctctga 35491545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 925 - 1043
Target Start/End: Original strand, 10364805 - 10364923
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  10364805 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagtttatccttgagacctcttaacgtta 10364904  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || | ||||||||||    
T  10364905 caccaaggcaccgaacctt 10364923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 925 - 1027
Target Start/End: Complemental strand, 32734685 - 32734583
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||| ||||| |||||||| ||||| |||||||||||||||||  ||||| | || |||||||| ||||| ||||| ||| ||||||||| ||||||| |    
T  32734685 gttgaacgtttataccaaacgtattccaccctccttgtgtctctggggttgactcattggttgaattcattcagttgatctttgagacctcttaacgtta 32734586  T
Q  1025 cat 1027  Q
    |||    
T  32734585 cat 32734583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 924 - 1053
Target Start/End: Original strand, 40678782 - 40678911
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||| || |  || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||     
T  40678782 tgttggacgtttataccgaacgcgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgtt 40678881  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  40678882 acaccaaggcaccgaaccttcaacctctga 40678911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 924 - 1053
Target Start/End: Complemental strand, 43982895 - 43982766
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  ||||| | ||| ||||||| ||||  ||||  ||||||||||||| |||||||     
T  43982895 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccatggttgaattcagtcagtgtatccttgagacctcttaacgtt 43982796  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  43982795 acaccaaggcaccgaaccttcaacctctga 43982766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 927 - 1027
Target Start/End: Original strand, 5306652 - 5306752
Alignment:
Q  927 tggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgaca 1026  Q
    |||| |||||||||||| ||||| |||||| ||||||||| | || || |||| ||||||||||||||| |||| |||||| ||  | ||||||||||||    
T  5306652 tggaagttcataccaaacgtattccacccttcttgtgtcttcgggattgagtcgttggttgatttcatcaagttgatccttaagttcctttaacgtgaca 5306751  T
Q  1027 t 1027  Q
    |    
T  5306752 t 5306752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 39800010 - 39800138
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| |||||||||||   ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  39800010 gttggacgtttataccaaacgtgttccaccatccttgtgtctttggggttgactccttggttgaattcagtcagtttatccttgagacctcttaacgtta 39800109  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  39800110 caccaaggcaccgaaccttcaacctctga 39800138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 925 - 1043
Target Start/End: Original strand, 19471802 - 19471920
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| || |  ||||| ||||||||||||| ||||||| |    
T  19471802 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaatttagtcagttcatccttgagacctcttaacgtta 19471901  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || | ||||||||||    
T  19471902 cacaaaggcaccgaacctt 19471920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 925 - 1027
Target Start/End: Complemental strand, 42120050 - 42119948
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    ||||||| || ||||| || ||||| |||||||||||  ||||  ||||| | |||||||||||  |||||||||| ||||||||||||| ||||||| |    
T  42120050 gttggacatttataccgaacgtattccaccctccttgcatctctggggttgactccttggttgaactcatccagttgatccttgagacctcttaacgtta 42119951  T
Q  1025 cat 1027  Q
    |||    
T  42119950 cat 42119948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 924 - 1053
Target Start/End: Complemental strand, 16253515 - 16253386
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    |||||| |||| ||||| || ||||| ||||||||||||||| |  ||||| | ||||||||| | ||||  ||||| |||||||| |||| ||||||||    
T  16253515 tgttgggcgtttataccgaacgtattccaccctccttgtgtcccgggggttgactccttggttaaattcactcagttgatccttgatacctcttaacgtg 16253416  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || || ||||||||| ||| |||||    
T  16253415 acaccaacgtgccgaaccttcaacctctga 16253386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1021
Target Start/End: Complemental strand, 5420507 - 5420411
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacg 1021  Q
    |||||||||| ||| | || || || |||||||||||||||||| ||||| | || |||||||| ||||  ||||| ||||||||||||| ||||||    
T  5420507 gttggacgtttatatcgaacgtgttccaccctccttgtgtctccggggttgactcattggttgaattcagtcagttcatccttgagacctcttaacg 5420411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 34639003 - 34638876
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||| ||||||||||||  ||||| | ||||||||||| ||||   |||| ||||||||||||| ||||||| |    
T  34639003 gttggacgtttataccgaaggtgttccacc-tccttgtgtctctggggttgactccttggttgaattcagtaagttgatccttgagacctcttaacgtta 34638905  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  |||| |||||||||| ||| |||||    
T  34638904 caccaatgcaccgaaccttcaacctctga 34638876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 37312663 - 37312791
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || || ||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||| | |    
T  37312663 gttggacgtttataccgaacgtgttccatcctccttgtgtctcgggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacatta 37312762  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  37312763 caccaaggcaccgaaccttcaacctctga 37312791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 926 - 1053
Target Start/End: Complemental strand, 16581859 - 16581732
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgac 1025  Q
    ||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| |||||| |||||| |||| || ||    
T  16581859 ttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttcagacctcttaatgttac 16581760  T
Q  1026 attaatgtaccgaaccttgaacatctga 1053  Q
    |  || | |||||||||| ||| |||||    
T  16581759 accaaggcaccgaaccttcaacctctga 16581732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 951 - 1053
Target Start/End: Original strand, 17796298 - 17796400
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatc 1050  Q
    |||||||| ||||||||| ||||| | ||| | ||||| ||||| ||||| ||||||||||||| ||||||| |||  || | |||||||||| ||| ||    
T  17796298 caccctccctgtgtctccggggttgactccctagttgaattcattcagttcatccttgagacctcttaacgttacaccaaggcaccgaaccttcaacctc 17796397  T
Q  1051 tga 1053  Q
    |||    
T  17796398 tga 17796400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 925 - 1043
Target Start/End: Complemental strand, 39393929 - 39393811
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||   |||| | ||||||||||| ||||  ||||| ||||||||||| | ||||||| |    
T  39393929 gttggacgtttataccgaaggtgttacaccctccttgtgtctctgaggttgactccttggttgaattcagtcagttgatccttgagacttcttaacgtta 39393830  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || | ||||||||||    
T  39393829 caccaaggcaccgaacctt 39393811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 3941775 - 3941678
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||  || || || |||||||||||||||||  ||||| | | ||||||||| ||||  ||||| ||||||||||||| |||||||    
T  3941775 gttggacgtttatactgaaggtgttccaccctccttgtgtctctggggttgacttcttggttgaattcagtcagttgatccttgagacctcttaacgt 3941678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 10360367 - 10360464
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||  || || || |||||||||||||| ||| ||||| | ||||||||||| ||||  ||||| ||| ||||||||| |||||||    
T  10360367 gttggacgtttatacagaacgtgttccaccctccttgtgtttccggggttgactccttggttgaattcagtcagttcatctttgagacctcttaacgt 10360464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 29067767 - 29067640
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| |||||||||||   ||||| | || |||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  29067767 gttggacgtttataccaaacgtgttccaccatccttgtgtctttggggttgactc-ttggttgaattcagtcagttcatccttgagacctcttaacgtta 29067669  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  29067668 caccaaggcaccgaaccttcaacctctga 29067640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 929 - 1019
Target Start/End: Original strand, 34521856 - 34521945
Alignment:
Q  929 gacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaa 1019  Q
    |||||| ||||| || || ||||||||||||||||||| | ||||| | ||||||||||| ||||   |||| ||||||||||||| ||||    
T  34521856 gacgtttataccgaacgtgtttcaccctccttgtgtct-ctgggttgactccttggttgaattcagttagttcatccttgagacctcttaa 34521945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 925 - 1014
Target Start/End: Complemental strand, 6902004 - 6901915
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacct 1014  Q
    |||||||||| || || ||||| ||  ||||||||||||||||| ||||| | | | | ||||| ||||| ||||| |||||||||||||    
T  6902004 gttggacgtttatgccgaatgtgttcaaccctccttgtgtctccggggttgacttcctagttgaattcattcagttcatccttgagacct 6901915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 6976876 - 6976779
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| ||  | || |||||||||||||||||  | ||| | |||||| |||| ||||  ||||| ||||||||||||| |||||||    
T  6976876 gttggacgtttataccgaacatgttccaccctccttgtgtctctggagttgactccttgtttgaattcagtcagttcatccttgagacctcttaacgt 6976779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 951 - 1028
Target Start/End: Original strand, 20529945 - 20530022
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacatt 1028  Q
    ||||||||||||||||| | |||| |||| | ||||||||| ||||| ||||||||| | | ||  ||||||||||||    
T  20529945 caccctccttgtgtctctatggttgagtcgtcggttgatttgatccaattaatccttcaaatctaataacgtgacatt 20530022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 3e-54; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 895 - 1051
Target Start/End: Complemental strand, 18147025 - 18146869
Alignment:
Q  895 cgacttaacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcat 994  Q
    ||||| ||||||||||| | | | ||||| ||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  18147025 cgactgaacgttattctcctgtcgtccaacgttggacgttcataccaaaagtattccaccctccttgtgtctccggggttgagtccttggttgatttcat 18146926  T
Q  995 ccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatct 1051  Q
     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18146925 tcagttgatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatct 18146869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 901 - 1062
Target Start/End: Original strand, 3380830 - 3380990
Alignment:
Q  901 aacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagtt 1000  Q
    ||||||||||| ||| | ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||    
T  3380830 aacgttattctcccgtcgtccaacgttggacgttcataccaaatgtatttcactctccttgtgtctccggggttgagtccttg-ttgatttcatccagtt 3380928  T
Q  1001 aatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
     ||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||    
T  3380929 gatccttgagaccttttaacgtcacattaatgcaccgaaccttgaacatctgaggatttcca 3380990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 901 - 1049
Target Start/End: Complemental strand, 28066306 - 28066158
Alignment:
Q  901 aacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagtt 1000  Q
    ||||||||||||||| | ||||| |||||| |||||||||||||||||| ||||||||||||||| || ||||| || ||||||||||||||||| ||||    
T  28066306 aacgttattcttccgtcgtccaacgttggatgttcataccaaatgtattacaccctccttgtgtcgccggggttgagaccttggttgatttcatctagtt 28066207  T
Q  1001 aatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacat 1049  Q
     |||||| |||||||||||||||||||||||||||||||||||||||||    
T  28066206 gatccttaagaccttttaacgtgacattaatgtaccgaaccttgaacat 28066158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 919 - 1062
Target Start/End: Complemental strand, 150121 - 149978
Alignment:
Q  919 tccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacctttta 1018  Q
    ||||| ||| ||||||||||||||||||||| |||||| |||||||||||| |||| ||||||||||||||||||||||||| || ||||||||||||||    
T  150121 tccaacgttagacgttcataccaaatgtattccacccttcttgtgtctccaaggttgagtccttggttgatttcatccagttgattcttgagacctttta 150022  T
Q  1019 acgtgacattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||    
T  150021 acgtgacattaatgtaccgaaccttgaacatatgaggatttcca 149978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 901 - 1062
Target Start/End: Complemental strand, 12082982 - 12082821
Alignment:
Q  901 aacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagtt 1000  Q
    |||||||| || ||| | ||||| |||| |||||||||||||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||||| |    
T  12082982 aacgttatcctcccgtcgtccaacgttgaacgttcataccaaatgtattccaccctccttgtgtctccggggttgagtcgttggttgatttcatccagct 12082883  T
Q  1001 aatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
     |||||| |||| |||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  12082882 gatccttaagacattttaacgtgacattaatgtaccgaaccttgaacatttgaggatttcca 12082821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 905 - 1062
Target Start/End: Complemental strand, 11824740 - 11824583
Alignment:
Q  905 ttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatc 1004  Q
    ||||||| ||| | ||||| |||||| ||| ||||||||| |||||||| |||||||| ||||  ||||| ||| ||||||||||||||||| ||| |||    
T  11824740 ttattctcccgtcgtccaacgttggatgtttataccaaatttatttcactctccttgtttctcaggggttgagtgcttggttgatttcatcccgttgatc 11824641  T
Q  1005 cttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||| ||| ||||    
T  11824640 cttgagaccttttaacgtgacattaatgtactggaccttgaacatctgaggatttcca 11824583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 919 - 1062
Target Start/End: Original strand, 27318001 - 27318144
Alignment:
Q  919 tccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacctttta 1018  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||||| | || |||||||| |||||||||| ||||| |||||| | ||||||||    
T  27318001 tccaatgtcggacgttcataccaaatgttttccaccctccttgtgtctccaagattgagtccttgattgatttcattcagttgatccttcaaacctttta 27318100  T
Q  1019 acgtgacattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
    || ||||||||||||||| || |||||||| |||| ||| ||||    
T  27318101 acatgacattaatgtacccaatcttgaacagctgaggatttcca 27318144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 925 - 1043
Target Start/End: Original strand, 26603376 - 26603494
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| |||||||||||||||||   |||| | ||||||||||| ||||| ||||| ||||||||||||| ||||||| |    
T  26603376 gttggacgtttataccgaacgtattccaccctccttgtgtctctgaggttaactccttggttgaattcattcagttgatccttgagacctcttaacgtta 26603475  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||| || | ||||||||||    
T  26603476 catcaaggcaccgaacctt 26603494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 927 - 1039
Target Start/End: Original strand, 8726391 - 8726503
Alignment:
Q  927 tggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgaca 1026  Q
    |||||||| ||||| ||  |||| |||||||||||||||| ||||||| | ||||||||||| |||||| |||| |||||||||||||  ||||||||||    
T  8726391 tggacgtttataccgaacttattccaccctccttgtgtctacagggttgactccttggttgaattcatcaagttgatccttgagacctcgtaacgtgaca 8726490  T
Q  1027 ttaatgtaccgaa 1039  Q
      || ||||||||    
T  8726491 ccaaggtaccgaa 8726503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 10523104 - 10522976
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| |||||||||||| |||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  10523104 gttggacgtttataccaaacgtgttccaccatccttgtgtctctagggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgtta 10523005  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  10523004 caccaaggcaccgaaccttcaacctctga 10522976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 40588585 - 40588457
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || ||||||||||||||||| |||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  40588585 gttggacgtttataccgaaggtgttccaccctccttgtgtctctagggttgactccttggttgaattcaatcagttcatccttgagacctcttaacgtta 40588486  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  40588485 caccaaggcaccgaaccttcaacctctga 40588457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 924 - 1022
Target Start/End: Complemental strand, 17183249 - 17183151
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    ||||||||||| |||||||| || || ||||||||||||||||| | |||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  17183249 tgttggacgtttataccaaacgtgttacaccctccttgtgtctctaaggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 17183151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 924 - 1053
Target Start/End: Complemental strand, 20564796 - 20564667
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||  ||||||||||||| |||||||     
T  20564796 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagtgtatccttgagacctcttaacgtt 20564697  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  20564696 acaccaaggcaccgaaccttcaacctctga 20564667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 48220913 - 48221041
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| |||||||||||  ||||  ||||| | ||||||||||| ||||  ||||| ||| ||||||||| ||||||| |    
T  48220913 gttggacgtttataccgaacgtattccaccctccttgcatctctggggttgactccttggttgaattcagtcagttcatcattgagacctcttaacgtta 48221012  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||| || |||||||||||| ||| |||||    
T  48221013 catcaaggtaccgaaccttcaacctctga 48221041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 926 - 1052
Target Start/End: Original strand, 20378875 - 20379001
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgac 1025  Q
    ||||||||| ||||| || ||||| |||||||||||||||||  ||||| | ||||||||||| || || || || ||||||||||||| ||||||| ||    
T  20378875 ttggacgtttataccgaacgtattccaccctccttgtgtctctggggttgactccttggttgaatttattcaattgatccttgagacctcttaacgttac 20378974  T
Q  1026 attaatgtaccgaaccttgaacatctg 1052  Q
    || || | | |||||||| ||| ||||    
T  20378975 atcaaggcatcgaaccttcaacctctg 20379001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 925 - 1014
Target Start/End: Original strand, 21187470 - 21187559
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacct 1014  Q
    |||||||||| ||||| || || ||||||||||||||||||||  ||||| | ||||||||||| ||||  ||||| |||||||||||||    
T  21187470 gttggacgtttataccgaacgtgtttcaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacct 21187559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 936 - 1053
Target Start/End: Complemental strand, 30360542 - 30360425
Alignment:
Q  936 ataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtac 1035  Q
    ||||| || ||||| ||||||||||||||||   ||||| | ||||||||||| ||||| ||||| ||||||||||||| ||||||| |||| || | |     
T  30360542 ataccgaacgtattccaccctccttgtgtctatggggttgactccttggttgaattcattcagttgatccttgagacctcttaacgttacatcaaggcat 30360443  T
Q  1036 cgaaccttgaacatctga 1053  Q
    |||||||| ||| |||||    
T  30360442 cgaaccttcaacctctga 30360425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 924 - 1020
Target Start/End: Original strand, 1642757 - 1642853
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaac 1020  Q
    ||||| ||||| ||| |||| ||||| |||||||||||||||||| || || | ||||||||||| ||||| || || ||||||||||||| |||||    
T  1642757 tgttgaacgtttatatcaaacgtattccaccctccttgtgtctccgggattgactccttggttgaattcattcaattgatccttgagacctcttaac 1642853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 28979193 - 28979321
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || ||||||||||||||||   ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  28979193 gttggacgtttataccgaacgtgttccaccctccttgtgtctatggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgtta 28979292  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  28979293 caccaaggcaccgaaccttcaacctctga 28979321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 925 - 1039
Target Start/End: Complemental strand, 17839359 - 17839245
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| || ||||| || || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  17839359 gttggacgtttattccaaacgtcttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgtta 17839260  T
Q  1025 cattaatgtaccgaa 1039  Q
    ||  || ||||||||    
T  17839259 caccaaggtaccgaa 17839245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 925 - 1019
Target Start/End: Complemental strand, 42682992 - 42682898
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaa 1019  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||    
T  42682992 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaa 42682898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 42735299 - 42735202
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||| ||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  42735299 gttggacgtttataccgaacgtgttccaccctccttctgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 42735202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 48315351 - 48315448
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| |||||||| || || |||||||||| | ||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  48315351 gttggacgtttataccaaacgtgttccaccctccttctatctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 48315448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 951 - 1007
Target Start/End: Complemental strand, 26926514 - 26926458
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatcctt 1007  Q
    |||||||||||||||||| || ||||||||||| |||||||||| ||||| ||||||    
T  26926514 caccctccttgtgtctccgggtttcagtccttgattgatttcattcagttgatcctt 26926458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 924 - 1020
Target Start/End: Original strand, 36393994 - 36394090
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaac 1020  Q
    ||||||||||| ||||| || || || ||||||||||||||||   ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||    
T  36393994 tgttggacgtttataccgaacgtgttccaccctccttgtgtctttggggttgactccttggttgaattcagtcagttcatccttgagacctcttaac 36394090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 46862365 - 46862493
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||| ||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||| | |    
T  46862365 gttggacgtttataccgaacgtgttccaccctccttctgtctctggggttgactccttggttgaattcaatcagttcatccttgagacctcttaacatta 46862464  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  46862465 caccaaggcaccgaaccttcaacctctga 46862493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 48270684 - 48270556
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||  ||||| || || || |||||||||| ||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||| ||||||||| |    
T  48270684 gttggacgtctataccgaacgtgttccaccctccttttgtctctggggttgactccttggttgaattcagtcagttcatccttgagactttttaacgtta 48270585  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  48270584 caccaaggcaccgaaccttcaacctctga 48270556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 928 - 991
Target Start/End: Complemental strand, 3924845 - 3924782
Alignment:
Q  928 ggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgattt 991  Q
    ||||||| ||| |||| ||||| ||||||||||||||||| |||||| |||| |||||||||||    
T  3924845 ggacgtttatatcaaacgtattccaccctccttgtgtctctagggttgagtctttggttgattt 3924782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 951 - 1022
Target Start/End: Original strand, 15338102 - 15338173
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||||||||||  ||||| | ||||||||||| ||||| || || ||||||||||||| |||||||    
T  15338102 caccctccttgtgtctctggggttgaatccttggttgaattcattcatttcatccttgagacctcttaacgt 15338173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 951 - 1028
Target Start/End: Complemental strand, 7062241 - 7062164
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacatt 1028  Q
    ||||||||||| |||||||||||| || ||||| |||||||||| |||||  ||||| ||| | |||| |||||||||    
T  7062241 caccctccttgcgtctccagggttgaggccttgattgatttcattcagttgttccttcagatcctttagcgtgacatt 7062164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 45363414 - 45363511
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||  || || || |||||||||||||||||  ||||| | | ||||||||| ||||  ||||| ||||||||||||| |||||||    
T  45363414 gttggacgtttatactgaaggtgttccaccctccttgtgtctctggggttgacttcttggttgaattcagtcagttgatccttgagacctcttaacgt 45363511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 929 - 1053
Target Start/End: Complemental strand, 18237596 - 18237472
Alignment:
Q  929 gacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacatt 1028  Q
    |||||| ||||| || ||||| |||| |||||| |||||  | ||| | | ||||||||| ||||| ||||| |||||||||||||  |||||| ||||     
T  18237596 gacgtttataccgaacgtattccaccatccttgcgtctctggagttgacttcttggttgaattcattcagttgatccttgagacctcgtaacgttacatc 18237497  T
Q  1029 aatgtaccgaaccttgaacatctga 1053  Q
    || | |||||||||| ||| |||||    
T  18237496 aaggcaccgaaccttcaacctctga 18237472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 43351270 - 43351398
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||  || || || |||||||||||||||||  ||||  | ||||||||||| ||||   |||| ||||||||||||| ||||||| |    
T  43351270 gttggacgtttatactgaacgtgttccaccctccttgtgtctctggggtagactccttggttgaattcagttagttcatccttgagacctcttaacgtta 43351369  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  43351370 caccaaggcaccgaaccttcaacctctga 43351398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 925 - 1020
Target Start/End: Complemental strand, 13916869 - 13916775
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaac 1020  Q
    |||||||||| ||||||||||| || |||| ||||||||||||  ||||| | | ||||||||| ||||  ||||| |||||||| |||| |||||    
T  13916869 gttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgact-cttggttgaattcagtcagttcatccttgaaacctcttaac 13916775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 983 - 1053
Target Start/End: Complemental strand, 47268889 - 47268819
Alignment:
Q  983 ggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctga 1053  Q
    |||||| ||||| ||||| ||||||||||||| ||||||| |||| || | |||||||||| ||| |||||    
T  47268889 ggttgaattcattcagttgatccttgagacctcttaacgttacatcaaggcaccgaaccttcaacctctga 47268819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 1e-50; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 896 - 1050
Target Start/End: Original strand, 25360738 - 25360892
Alignment:
Q  896 gacttaacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatc 995  Q
    |||| ||||||||||| ||| | | ||| ||| ||| ||||||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||    
T  25360738 gactgaacgttattctcccgtcgtacaacgttcgactttcataccaaatgtattccaccctccttgtgtcttcggggttgagtccttggttgatttcatc 25360837  T
Q  996 cagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatc 1050  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25360838 cagttgatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatc 25360892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 919 - 1062
Target Start/End: Original strand, 13131252 - 13131395
Alignment:
Q  919 tccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacctttta 1018  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| ||||| |||||||| |||||||||||  ||| |||||||||||||||||    
T  13131252 tccaatgttggacgttcataccaaatgtatttcattctccttgtgtctccggggttgagtccttgattgatttcatctcgttgatccttgagacctttta 13131351  T
Q  1019 acgtgacattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||    
T  13131352 acgtgacattaatgtaccgaaccttgaacatttgaggatttcca 13131395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 901 - 1051
Target Start/End: Complemental strand, 18920782 - 18920632
Alignment:
Q  901 aacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagtt 1000  Q
    ||||||||||| ||| | ||||| |||  ||||||||||||||||||||||||||| || |||||||| ||||| |||| ||||||||||||||| ||||    
T  18920782 aacgttattctcccgtcgtccaacgttaaacgttcataccaaatgtatttcacccttctcgtgtctccggggttgagtctttggttgatttcatctagtt 18920683  T
Q  1001 aatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatct 1051  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18920682 gatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatct 18920632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 895 - 1052
Target Start/End: Original strand, 36312098 - 36312255
Alignment:
Q  895 cgacttaacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcat 994  Q
    ||||||||||||||||| | | | ||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||||||||||||    
T  36312098 cgacttaacgttattctccggtcgtccaatgttggacgttcataccaaatgtattccaccctcctcgtgtctccggggttgagtccttggttgatttcat 36312197  T
Q  995 ccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctg 1052  Q
    | |||| ||||||||||| ||||||||||| |||||||||  ||| ||||||||||||    
T  36312198 caagttgatccttgagacattttaacgtgatattaatgtattgaagcttgaacatctg 36312255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 919 - 1053
Target Start/End: Original strand, 15798258 - 15798392
Alignment:
Q  919 tccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacctttta 1018  Q
    ||||| ||||| | ||||||||||||||||||||| |||||||||||||| ||||| ||||||| ||||||||||| ||||| |||||||||||||||||    
T  15798258 tccaacgttgggcattcataccaaatgtatttcactctccttgtgtctccggggttgagtccttagttgatttcattcagttgatccttgagacctttta 15798357  T
Q  1019 acgtgacattaatgtaccgaaccttgaacatctga 1053  Q
    ||||||||||||||||  |||||||||||||||||    
T  15798358 acgtgacattaatgtaaagaaccttgaacatctga 15798392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 933 - 1048
Target Start/End: Original strand, 12067774 - 12067889
Alignment:
Q  933 ttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatg 1032  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||||    
T  12067774 ttcataccaaatgtattccactctccttgtgtctccggggttcagtccttggttgatttcattcagttgatctttgagaccttttaacgcgacattaatg 12067873  T
Q  1033 taccgaaccttgaaca 1048  Q
    ||||||||||||||||    
T  12067874 taccgaaccttgaaca 12067889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 919 - 1062
Target Start/End: Original strand, 17195535 - 17195678
Alignment:
Q  919 tccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacctttta 1018  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||| |  |||||    
T  17195535 tccaacgtttgacgttcatacctaatgtatttcaccctccttgtgtctccggggtttagtccttggttgatttcatccagttgattcttgaaaaatttta 17195634  T
Q  1019 acgtgacattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
    ||||||||||||| ||||  ||||||||||||||| ||| ||||    
T  17195635 acgtgacattaatataccagaccttgaacatctgaggatttcca 17195678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 896 - 1051
Target Start/End: Complemental strand, 19748121 - 19747966
Alignment:
Q  896 gacttaacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatc 995  Q
    |||| ||||||||||| |||   ||||| |||||||||||||| |||||||||| |||||| |||||||||   ||||| |||||||||||||||||||     
T  19748121 gactgaacgttattctcccgttgtccaacgttggacgttcatatcaaatgtattccacccttcttgtgtctttggggttgagtccttggttgatttcatg 19748022  T
Q  996 cagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatct 1051  Q
    || || | |||||||||||||||||||||||||||| |||| ||||||||||||||    
T  19748021 caattgagccttgagaccttttaacgtgacattaatttaccaaaccttgaacatct 19747966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 922 - 1053
Target Start/End: Complemental strand, 2599255 - 2599124
Alignment:
Q  922 aatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacg 1021  Q
    ||||||||||||| ||||| || ||||| |||||||||||||||||| ||||| | ||||||||||| ||||| ||||| |||||||||| || |||| |    
T  2599255 aatgttggacgtttataccgaacgtattccaccctccttgtgtctccggggttgactccttggttgaattcattcagttgatccttgagatctcttaagg 2599156  T
Q  1022 tgacattaatgtaccgaaccttgaacatctga 1053  Q
    |||||  || ||||| |||||| ||| |||||    
T  2599155 tgacaccaaggtaccaaacctttaacctctga 2599124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 926 - 1054
Target Start/End: Original strand, 23228852 - 23228969
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgac 1025  Q
    ||||||||||||| || ||||||| |||||||||||||||||| ||||| ||| |||||||||||||||           | ||||||||||||| ||||    
T  23228852 ttggacgttcatatcagatgtattccaccctccttgtgtctccggggttgagttcttggttgatttcat-----------tcgagaccttttaacatgac 23228940  T
Q  1026 attaatgtaccgaaccttgaacatctgat 1054  Q
    |||||||||| |||||||||| |||||||    
T  23228941 attaatgtacagaaccttgaatatctgat 23228969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 1971398 - 1971301
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| |||||||| || || |||||||||||||||||| ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  1971398 gttggacgtttataccaaacgtgttccaccctccttgtgtctccggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 1971301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 19400396 - 19400268
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| |||| ||||||||||||  ||||| | ||||||||||| ||||| ||||| ||||||||||||| | ||||| |    
T  19400396 gttggacgtttataccgaacgtattccaccatccttgtgtctctggggttgactccttggttgaattcattcagttgatccttgagacctctcaacgtta 19400297  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||| || | |||||||||| ||| |||||    
T  19400296 catcaaggcaccgaaccttcaacctctga 19400268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 925 - 1043
Target Start/End: Complemental strand, 12742748 - 12742630
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| |||||| ||||||||||| ||||| | ||||||||||| |||||  |||| |||||||| |||| |||||||||    
T  12742748 gttggacgtttataccgaacgtattccacccttcttgtgtctccggggttgactccttggttgaattcatttagttgatccttgatacctcttaacgtga 12742649  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || || |||||||||    
T  12742648 caccaaggtgccgaacctt 12742630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 925 - 1043
Target Start/End: Complemental strand, 12805566 - 12805448
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| |||||| ||||||||||| ||||| | ||||||||||| |||||  |||| |||||||| |||| |||||||||    
T  12805566 gttggacgtttataccgaacgtattccacccttcttgtgtctccggggttgactccttggttgaattcatttagttgatccttgatacctcttaacgtga 12805467  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || || |||||||||    
T  12805466 caccaaggtgccgaacctt 12805448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 925 - 1027
Target Start/End: Complemental strand, 40009561 - 40009459
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| ||||||||||| ||||| |||||| | ||||||||||| ||||| || || ||||||||||||| ||||||| |    
T  40009561 gttggacgtttataccgaacgtattccaccctccttgcgtctctagggttgactccttggttgaattcattcatttgatccttgagacctcttaacgtta 40009462  T
Q  1025 cat 1027  Q
    |||    
T  40009461 cat 40009459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 1400476 - 1400604
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||| ||||| | ||||||||||| ||||  ||||| ||| ||||||||| ||||||| |    
T  1400476 gttggacgtttataccgaacgtgttccaccctccttgtgtctccggggttgactccttggttgaattcagtcagttcatcattgagacctcttaacgtta 1400575  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  1400576 caccaaggcaccgaaccttcaacctctga 1400604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 8576315 - 8576443
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  8576315 gttggacgtttataccaaacgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagtttatccttgagacctcttaacgtta 8576414  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  8576415 caccaaagcaccgaaccttcaacctctga 8576443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 11346742 - 11346614
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  11346742 gttggacgtttataccaaacgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgtta 11346643  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  11346642 caccaaggcaccgaaccttcaacctctga 11346614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 28881024 - 28880896
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    ||||||||||  |||||||||| || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  28881024 gttggacgtttgtaccaaatgttttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagtttatccttgagacctcttaacgtta 28880925  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  28880924 caccaaggcaccgaaccttcaacctctga 28880896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 541809 - 541906
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  541809 gttggacgtttataccgaaggtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 541906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 924 - 1053
Target Start/End: Original strand, 19036847 - 19036976
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  ||||| | ||||| ||||| ||||  ||||  ||||||||||||| |||||||     
T  19036847 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactcctttgttgaattcagtcagtgtatccttgagacctcttaacgtt 19036946  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  19036947 acaccaaggcaccgaaccttcaacctctga 19036976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 3458869 - 3458741
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    ||||||| || ||||| || ||||| ||||||||||| ||||   ||||| | ||||||||||| ||||| ||||| ||||||||||||| ||||||| |    
T  3458869 gttggacatttataccgaacgtattccaccctccttgcgtctttggggttgactccttggttgaattcattcagttgatccttgagacctcttaacgtta 3458770  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||| || |  ||||||||| ||| |||||    
T  3458769 catcaaggcgccgaaccttcaacctctga 3458741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 11027810 - 11027682
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| |||||||||||   ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  11027810 gttggacgtttataccaaacgtgttccaccatccttgtgtctttggggttgactccttggttgaattcagtcagtttatccttgagacctcttaacgtta 11027711  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  11027710 caccaaggcaccgaaccttcaacctctga 11027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 38854191 - 38854063
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| |||||||||||   ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  38854191 gttggacgtttataccaaacgtgttccaccatccttgtgtctttggggttgactccttggttgaattcagtcagtttatccttgagacctcttaacgtta 38854092  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  38854091 caccaaggcaccgaaccttcaacctctga 38854063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 931 - 1053
Target Start/End: Original strand, 6793566 - 6793688
Alignment:
Q  931 cgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaa 1030  Q
    |||| ||||| ||||| || || ||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |||  ||    
T  6793566 cgtttataccgaatgtgttccatcctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgttacaccaa 6793665  T
Q  1031 tgtaccgaaccttgaacatctga 1053  Q
     | |||||||||| ||| |||||    
T  6793666 ggcaccgaaccttcaacttctga 6793688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 18308293 - 18308196
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||| | |||||||    
T  18308293 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacttcttaacgt 18308196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 945 - 1022
Target Start/End: Complemental strand, 33370667 - 33370590
Alignment:
Q  945 gtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    ||||| |||||||||||||||||| ||||| ||||| | ||| | ||||| ||||| ||||||||||||| |||||||    
T  33370667 gtattccaccctccttgtgtctccggggttgagtccctagttaaattcattcagttcatccttgagacctcttaacgt 33370590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 7403 - 7531
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| ||||||||||||  ||||| | ||||||||| | ||||  ||||| |||||||||| || ||||||| |    
T  7403 gttggacgtttataccaaacgtgttccaccatccttgtgtctctggggttgactccttggttcaattcagtcagttcatccttgagatctcttaacgtta 7502  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  7503 caccaaggcaccgaaccttcaacctctga 7531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 4724248 - 4724376
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| ||||| || |||  ||||||||||||  ||||| | ||||||||||| ||||  |||||  |||||||||||| ||||||| |    
T  4724248 gttggacgtttataccgaatgtgttccactttccttgtgtctctggggttgactccttggttgaattcagtcagtttttccttgagacctcttaacgtta 4724347  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  4724348 caccaaggcaccgaaccttcaacctctga 4724376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 8537987 - 8537859
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||| ||||| ||||| || || || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  8537987 gttgaacgtttataccgaacgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgtta 8537888  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  8537887 caccaaggcaccgaaccttcaacctctga 8537859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 946 - 1022
Target Start/End: Original strand, 17366930 - 17367006
Alignment:
Q  946 tatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||| |||||||||||||||| | ||||| | |||||||| || ||||| ||||| ||||||||||||| |||||||    
T  17366930 tattccaccctccttgtgtctacggggttgactccttggtagaattcattcagttcatccttgagacctcttaacgt 17367006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 30709631 - 30709503
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| ||||||| |||   ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  30709631 gttggacgtttataccaaacgtgttccaccatccttgtatctttggggttgactccttggttgaattcagtcagtttatccttgagacctcttaacgtta 30709532  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  30709531 caccaaggcaccgaaccttcaacctctga 30709503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 951 - 1053
Target Start/End: Original strand, 27661577 - 27661679
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatc 1050  Q
    |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |||  || | |||||||||| ||| ||    
T  27661577 caccatccttgtgtctctggggttgactccttggttgaattcagtcagtttatccttgagacctcttaacgttacaccaaggcaccgaaccttcaacctc 27661676  T
Q  1051 tga 1053  Q
    |||    
T  27661677 tga 27661679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 7082325 - 7082228
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||   |||| |||||| |||||| |||||||    
T  7082325 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtgagttcatcctttagacctcttaacgt 7082228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 3601374 - 3601246
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| ||| | ||  ||||||||||||||||  ||||| | |||||| |||| ||||  ||||| ||| ||||||||| ||||||| |    
T  3601374 gttggacgtttataccgaatatgttctaccctccttgtgtctctggggttgactccttgattgaattcagtcagttcatctttgagacctcttaacgtta 3601275  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | ||| |||||||||| |||||    
T  3601274 caccaaggcaccaaaccttgaacctctga 3601246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 951 - 1007
Target Start/End: Complemental strand, 21290614 - 21290558
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatcctt 1007  Q
    ||||||| ||| |||||| ||||| ||||||||||||||||||| ||||| ||||||    
T  21290614 caccctctttgcgtctccggggttgagtccttggttgatttcattcagttgatcctt 21290558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 929 - 1053
Target Start/End: Complemental strand, 35565301 - 35565177
Alignment:
Q  929 gacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacatt 1028  Q
    |||||| ||||| || || || |||||||||| ||||||  ||||| | ||||||||||| ||||  |||||  |||||||||||| ||||||| |||      
T  35565301 gacgtttataccgaacgtgttccaccctccttatgtctctggggttgactccttggttgaattcagtcagttcgtccttgagacctcttaacgttacacc 35565202  T
Q  1029 aatgtaccgaaccttgaacatctga 1053  Q
    || | |||||||||| ||| |||||    
T  35565201 aaggcaccgaaccttcaacctctga 35565177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 926 - 1022
Target Start/End: Original strand, 35927612 - 35927708
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    ||||||||| ||| | || || || ||||||  ||||||||||  |||| | ||||||||||| ||||| ||||| ||||||||||||| |||||||    
T  35927612 ttggacgtttataacgaacgtgttacaccctaattgtgtctccgaggttgactccttggttgaattcattcagttcatccttgagacctcttaacgt 35927708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 929 - 1028
Target Start/End: Complemental strand, 37396731 - 37396635
Alignment:
Q  929 gacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacatt 1028  Q
    |||||||||||||||  |||| |||||||||||||||| |  |||| |||| ||||||||  |||||||||| |||||| |||  |||||||||| ||||    
T  37396731 gacgttcataccaaacctatt-caccctccttgtgtcttcgtggttgagtcattggttga--tcatccagttgatccttcagatattttaacgtggcatt 37396635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 1e-50; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 903 - 1053
Target Start/End: Original strand, 23124685 - 23124835
Alignment:
Q  903 cgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaa 1002  Q
    ||||||||||||| | ||||| |||||||  ||| ||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||| |    
T  23124685 cgttattcttccgtcgtccaacgttggacaatcacaccaaatatattacaccctccttgtgtctccggggttgagtccttggttgatttcatccagttga 23124784  T
Q  1003 tccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctga 1053  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23124785 tccttgagaccttttaacgtgacattaatgtaccgatccttgaacatctga 23124835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 919 - 1062
Target Start/End: Complemental strand, 17291993 - 17291850
Alignment:
Q  919 tccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacctttta 1018  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||||  ||||| |||||||||||||||||||| || | |||||||||||||||||    
T  17291993 tccaacgttggacgttcataccaaacgtatttcactctccttgtgtctcgggggttgagtccttggttgatttcatctagctgatccttgagacctttta 17291894  T
Q  1019 acgtgacattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||    
T  17291893 acgtgacattaatgtaccgaaccttgaacatttgaggatttcca 17291850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 922 - 1053
Target Start/End: Complemental strand, 13866300 - 13866169
Alignment:
Q  922 aatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacg 1021  Q
    ||||||||||||| |||||||| | ||| |||||||||||||||||  ||||| | ||||| ||||| ||||| ||||| ||||||||||||| ||||||    
T  13866300 aatgttggacgtttataccaaacgcattccaccctccttgtgtctctggggttgactccttagttgaattcattcagttgatccttgagacctcttaacg 13866201  T
Q  1022 tgacattaatgtaccgaaccttgaacatctga 1053  Q
    |||||  || |||||||||||| ||| |||||    
T  13866200 tgacaccaaggtaccgaaccttcaacctctga 13866169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 929 - 1053
Target Start/End: Original strand, 4785599 - 4785723
Alignment:
Q  929 gacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacatt 1028  Q
    |||||| ||||| ||||| || |||||||||||||||||  ||||| | ||||||||||| ||||| ||||||||||||||||||| |||| || ||||     
T  4785599 gacgtttataccgaatgtgttccaccctccttgtgtctctggggttgactccttggttgaattcattcagttaatccttgagacctcttaaggttacatc 4785698  T
Q  1029 aatgtaccgaaccttgaacatctga 1053  Q
    || | |||||||||| ||| |||||    
T  4785699 aaggcaccgaaccttcaacctctga 4785723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 930 - 1027
Target Start/End: Original strand, 12227669 - 12227766
Alignment:
Q  930 acgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacat 1027  Q
    ||||||||||||||  |||| |||||||||||| ||| || |||| |||||||||||||||| || ||||| || ||| |||||||||||||||||||    
T  12227669 acgttcataccaaacatattccaccctccttgtatcttcacggtttagtccttggttgatttaattcagttgattcttcagaccttttaacgtgacat 12227766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 925 - 1026
Target Start/End: Complemental strand, 18412629 - 18412528
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| |||||| ||||||||||| ||||| | ||||||||||| ||||| ||||| |||||||| |||| |||||||||    
T  18412629 gttggacgtttataccgaacgtattccacccttcttgtgtctccggggttgactccttggttgaattcattcagttgatccttgatacctcttaacgtga 18412530  T
Q  1025 ca 1026  Q
    ||    
T  18412529 ca 18412528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 937 - 1049
Target Start/End: Original strand, 20759329 - 20759435
Alignment:
Q  937 taccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtacc 1036  Q
    |||||||||||||  ||||||||||||||||| ||||  ||||      |||||||||| |||| || |||||||||||||||||||||||||||||| |    
T  20759329 taccaaatgtattctaccctccttgtgtctccggggtcgagtc------tgatttcatctagttgattcttgagaccttttaacgtgacattaatgtatc 20759422  T
Q  1037 gaaccttgaacat 1049  Q
     ||||||||||||    
T  20759423 aaaccttgaacat 20759435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 937 - 1049
Target Start/End: Original strand, 20765720 - 20765826
Alignment:
Q  937 taccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtacc 1036  Q
    |||||||||||||  ||||||||||||||||| ||||  ||||      |||||||||| |||| || |||||||||||||||||||||||||||||| |    
T  20765720 taccaaatgtattctaccctccttgtgtctccggggtcgagtc------tgatttcatctagttgattcttgagaccttttaacgtgacattaatgtatc 20765813  T
Q  1037 gaaccttgaacat 1049  Q
     ||||||||||||    
T  20765814 aaaccttgaacat 20765826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 13850783 - 13850655
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| ||||| |||||||||||||||||  ||||| | ||||||||||| ||||| ||||| |||| | |||||| |||| ||||    
T  13850783 gttggacgtttataccaaacgtattccaccctccttgtgtctctggggttgactccttggttgaattcattcagttgatccgtaagacctcttaatgtga 13850684  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || ||||| |||||| ||| |||||    
T  13850683 caccaaggtaccaaaccttcaacctctga 13850655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 924 - 1053
Target Start/End: Original strand, 242588 - 242717
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||     
T  242588 tgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgtt 242687  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  242688 acaccaaggcaccgaaccttcaacctctga 242717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 924 - 1053
Target Start/End: Original strand, 6177487 - 6177616
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||  ||||||||||||| |||||||     
T  6177487 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagtgtatccttgagacctcttaacgtt 6177586  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  6177587 acaccaaggcaccgaaccttcaacctctga 6177616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 17211300 - 17211203
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || ||||| |||||||||||||||||  ||||| | ||||||||||| |||||  |||| ||||||||||||| |||||||    
T  17211300 gttggacgtttataccgaacgtattccaccctccttgtgtctcatgggttgactccttggttgaattcatttagttcatccttgagacctcttaacgt 17211203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 25762632 - 25762535
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| ||||| || |||||||||||||||||| ||||| | ||||||||||| |||| |||||| ||| || |||||| |||||||    
T  25762632 gttggacgtttataccgaatgtgttccaccctccttgtgtctccggggttgactccttggttgaattcagccagttcatcattaagacctcttaacgt 25762535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 924 - 1053
Target Start/End: Original strand, 41794734 - 41794863
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||  ||||||||||||| |||||||     
T  41794734 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagtgtatccttgagacctcttaacgtt 41794833  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  41794834 acaccaaggcaccgaaccttcaacctctga 41794863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 924 - 1053
Target Start/End: Complemental strand, 56138945 - 56138816
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||  ||||||||||||| |||||||     
T  56138945 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagtgtatccttgagacctcttaacgtt 56138846  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  56138845 acaccaaggcaccgaaccttcaacctctga 56138816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 3393338 - 3393210
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||| | || ||||| |||||||||||||||||| ||||| | || |||||||| |||||  |||| ||||||||||||| ||||||| |    
T  3393338 gttggacgtttatatcgaacgtattccaccctccttgtgtctccggggttgactcattggttgaattcatttagttgatccttgagacctcttaacgtta 3393239  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  3393238 caccaaggcaccgaaccttcaacctctga 3393210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 21017350 - 21017478
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  21017350 gttggacgtttataccaaacgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagtttatccttgagacctcttaacgtta 21017449  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  21017450 caccaaggcaccgaaccttcaacctctga 21017478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 44560353 - 44560481
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||  || || || |||||||||||||||||  ||||| | ||||||||||| ||||| ||||| ||||||||||||| ||||| | |    
T  44560353 gttggacgtttatactgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcattcagttcatccttgagacctcttaacatta 44560452  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || |||||||||||| ||| |||||    
T  44560453 caccaaggtaccgaaccttcaacctctga 44560481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 49792109 - 49792237
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  49792109 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcaatcagttcatccttgagacctcttaacgtta 49792208  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  49792209 caccaaggcaccgaaccttcaacctctga 49792237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 926 - 1053
Target Start/End: Original strand, 21412699 - 21412826
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgac 1025  Q
    ||||||||| |||||  | ||||| ||||||||||||||||||  |||| | ||||||||||| ||||| ||||| ||||||||||||| |||| || ||    
T  21412699 ttggacgtttataccggacgtattccaccctccttgtgtctccgtggttgactccttggttgaattcattcagttgatccttgagacctcttaatgttac 21412798  T
Q  1026 attaatgtaccgaaccttgaacatctga 1053  Q
    | ||| |  ||||||||| ||| |||||    
T  21412799 actaaggccccgaaccttcaacctctga 21412826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 20901841 - 20901938
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || ||  ||||||||||||||| ||||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  20901841 gttggacgtttataccgaacgtgttctaccctccttgtgtcttcagggttgactccttggttgaattcaatcagttcatccttgagacctcttaacgt 20901938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 22436945 - 22436848
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  22436945 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 22436848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 28082272 - 28082175
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| |||||||| || || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  28082272 gttggacgtttataccaaacgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 28082175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 924 - 1053
Target Start/End: Original strand, 32938074 - 32938203
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||| || || || ||||||||||||||||    |||| | ||||||||||| ||||| ||||| ||||||||||||| |||||||     
T  32938074 tgttggacgtttataccgaacgtgttccaccctccttgtgtctatgtggttgactccttggttgaattcattcagttcatccttgagacctcttaacgtt 32938173  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  32938174 acaccaaggcaccgaaccttcaacctctga 32938203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 51027940 - 51028037
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || ||| |||||||||||||  ||||| ||||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  51027940 gttggacgtttataccgaacgtgttccactctccttgtgtctctggggttgagtccttggttgaattcagtcagttcatccttgagacctcttaacgt 51028037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 1226193 - 1226066
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||| |||| ||||| ||||||||| |||||||  ||||| | ||||||||||| ||||| ||||| ||||||||||| | ||||||| |    
T  1226193 gttggacgtttatagcaaacgtattccaccctcct-gtgtctctggggttaactccttggttgaattcattcagttgatccttgagacttcttaacgtta 1226095  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||| || | ||| |||||| ||| |||||    
T  1226094 catcaaggcaccaaaccttcaacctctga 1226066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 11288329 - 11288201
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||  || ||||| |||||||||||||||| | ||||| | ||| ||||||| ||||| || || ||||||||||||| ||||||| |    
T  11288329 gttggacgtttatacggaacgtattccaccctccttgtgtcttcggggttgattccctggttgaattcattcatttcatccttgagacctcttaacgtta 11288230  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  11288229 caccaaggcaccgaaccttcaacctctga 11288201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 946 - 1052
Target Start/End: Complemental strand, 10312285 - 10312179
Alignment:
Q  946 tatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttga 1045  Q
    |||| ||| |||||||||||||| ||||| | ||||||||||| ||||| ||||| |||||| |||||| ||||||| |||  || | |||||||||| |    
T  10312285 tattccacactccttgtgtctccggggttgactccttggttgaattcattcagttcatccttcagacctcttaacgttacaccaaggcaccgaaccttca 10312186  T
Q  1046 acatctg 1052  Q
    || ||||    
T  10312185 acctctg 10312179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 951 - 1053
Target Start/End: Complemental strand, 42886271 - 42886169
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatc 1050  Q
    |||||||||||||||||| ||||| | ||||||||||| ||||  ||||| || |||||||||| ||||||| |||  || | |||||||||| ||| ||    
T  42886271 caccctccttgtgtctcccgggttgactccttggttgaattcagtcagttcattcttgagacctcttaacgttacaccaaagcaccgaaccttcaacctc 42886172  T
Q  1051 tga 1053  Q
    |||    
T  42886171 tga 42886169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 20779042 - 20779139
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||| ||||||| ||| ||||| | ||||||||||| ||||| ||||| ||| ||||||||| |||||||    
T  20779042 gttggacgtttataccgaacgtgttccacccttcttgtgtgtccggggttgactccttggttgaattcattcagttcatctttgagacctcttaacgt 20779139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 40353946 - 40354043
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| |||||||| || || |||| ||||||||||||  ||||| | || |||||||| ||||  ||||| ||||||||||||| |||||||    
T  40353946 gttggacgtttataccaaacgtgttccaccatccttgtgtctctggggttgactctttggttgaattcagtcagtttatccttgagacctcttaacgt 40354043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 43889672 - 43889769
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||| ||||||||| |||||||    
T  43889672 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatcattgagacctcttaacgt 43889769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 47657528 - 47657625
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||| ||| ||||| || || || ||||| |||||||||||  ||||| | ||||||||||| |||| |||||| ||||||||||||| |||||||    
T  47657528 gttggatgtttataccgaacgtgttccacccaccttgtgtctctggggttgattccttggttgaattcagccagttcatccttgagacctcttaacgt 47657625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 51428365 - 51428462
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||| ||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  51428365 gttgaacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 51428462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 26591858 - 26591986
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||| | || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| || |||||||||| ||||||| |    
T  26591858 gttggacgtttatatcgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcattcttgagacctcttaacgtta 26591957  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || |||||||| ||| ||| |||||    
T  26591958 caccaaggtaccgaatcttcaacctctga 26591986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 31324208 - 31324080
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||  ||  |||| || |||| |||||||| | ||||| | | ||||||||| ||||| || || ||||||||||||| |||||||||    
T  31324208 gttggacgtttatactgaacctattccatcctcattgtgtcttcggggttgactacttggttgaattcatgcaattgatccttgagacctcttaacgtga 31324109  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || |||||||||||| ||| |||||    
T  31324108 caccaaggtaccgaaccttcaacctctga 31324080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 37866440 - 37866312
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||| ||| ||||| ||||| || |||||| ||||||||||   |||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  37866440 gttggatgtttataccgaatgtgttccacccttcttgtgtctctgaggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgtta 37866341  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  ||   |||||||||| |||||||||    
T  37866340 caccaagccaccgaaccttcaacatctga 37866312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 984 - 1048
Target Start/End: Complemental strand, 42421012 - 42420948
Alignment:
Q  984 gttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaaca 1048  Q
    ||||||||||| | ||| || ||| |||||||||||||||| |||||| ||||||||||||||||    
T  42421012 gttgatttcattcggttgattctttagaccttttaacgtgatattaatataccgaaccttgaaca 42420948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 951 - 1022
Target Start/End: Complemental strand, 45939533 - 45939462
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||||||||| | ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  45939533 caccctccttgtgtcttcggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 45939462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 946 - 1020
Target Start/End: Original strand, 957649 - 957723
Alignment:
Q  946 tatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaac 1020  Q
    |||| |||||||||| ||||||| ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||    
T  957649 tattccaccctccttatgtctccggggttgactccttggttgaattcagtcagttcatccttgagacctcttaac 957723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 925 - 1043
Target Start/End: Original strand, 31824802 - 31824920
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| |||||||||||  ||||  | ||| | ||||||||||| ||||| ||||| |||||||||| || ||||| | |    
T  31824802 gttggacgtttataccgaacgtattccaccctccttgcatctctggagttgactccttggttgaattcattcagttgatccttgagagctcttaacttta 31824901  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||| || | ||||||||||    
T  31824902 catcaaggcaccgaacctt 31824920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 979 - 1053
Target Start/End: Original strand, 33163771 - 33163845
Alignment:
Q  979 ccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctga 1053  Q
    |||||||||| ||||| ||||| ||||||||||||| ||||||| |||| || | |||||||||| ||| |||||    
T  33163771 ccttggttgaattcattcagttgatccttgagacctcttaacgttacatcaaggcaccgaaccttcaacgtctga 33163845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 951 - 1053
Target Start/End: Original strand, 49423957 - 49424059
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatc 1050  Q
    ||||||||||||||||   ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |||  || | |||||||||| ||| ||    
T  49423957 caccctccttgtgtctatggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgttacaccaaggcaccgaaccttcaacctc 49424056  T
Q  1051 tga 1053  Q
    |||    
T  49424057 tga 49424059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 951 - 1024
Target Start/End: Complemental strand, 24075112 - 24075039
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||||||||||||||||| |||||||| |||||||  | ||||| |||||| ||| | |||| |||||    
T  24075112 caccctccttgtgtctccagggtttagtccttgattgattttgttcagttgatccttcagatcctttagcgtga 24075039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 34529969 - 34530066
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||| ||||||||||  ||||| | ||||||||||| ||||  ||||| |||||||||| || |||||||    
T  34529969 gttggacgtttataccgaaggtgttccacccttcttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagatctcttaacgt 34530066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 924 - 1053
Target Start/End: Complemental strand, 49094780 - 49094651
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  ||||| | | ||||||||| ||||  ||||  |||||||||| || |||| ||     
T  49094780 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactacttggttgaattcagtcagtgtatccttgagatctcttaatgtt 49094681  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  49094680 acaccaaggcaccgaaccttcaacctctga 49094651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 9489713 - 9489585
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||  || || || |||||||||||||||||| ||||| | ||||| ||||| ||||   |||| ||||||||||||| ||||| | |    
T  9489713 gttggacgtttatactgaaggtgttccaccctccttgtgtctccggggttgattcctttgttgaattcagttagttgatccttgagacctcttaacatta 9489614  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  9489613 caccaaggcaccgaaccttcaacctctga 9489585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 36776692 - 36776820
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    ||||||| || ||||| || || || ||||||||||||||||   ||||| | ||||||||||| ||||  ||||| ||||||| ||||| ||||||| |    
T  36776692 gttggacatttatacctaacgtgttccaccctccttgtgtctatggggttgactccttggttgaattcagtcagttcatccttgcgacctcttaacgtta 36776791  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  36776792 caccaaggcaccgaaccttcaacctctga 36776820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 951 - 1053
Target Start/End: Complemental strand, 1042759 - 1042657
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatc 1050  Q
    ||||||||||||||||   ||||| | | ||||||||| ||||  ||||| ||||||||||||| ||||||| |||  || | |||||||||| ||| ||    
T  1042759 caccctccttgtgtctttggggttgacttcttggttgaattcagtcagttgatccttgagacctcttaacgttacaccaaggcaccgaaccttcaacctc 1042660  T
Q  1051 tga 1053  Q
    |||    
T  1042659 tga 1042657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 925 - 1043
Target Start/End: Complemental strand, 2773043 - 2772925
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||| | || || || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||| |||||||||| || ||||||| |    
T  2773043 gttggacgtttataacgaacgtgttccaccatccttgtgtctctcgggttgactccttggttgaattcagtcagttcatccttgagatctcttaacgtta 2772944  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || | ||||||||||    
T  2772943 caccaaggcaccgaacctt 2772925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 924 - 1022
Target Start/End: Original strand, 14330866 - 14330964
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    ||||||||||| ||||| || || || ||||||||||||||||| || ||| | ||||||||||| ||||   | || |||||| |||||| |||||||    
T  14330866 tgttggacgtttataccgaaagtgttccaccctccttgtgtctctagcgttgactccttggttgaattcagtgatttcatcctttagacctcttaacgt 14330964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 4e-47; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 919 - 1051
Target Start/End: Original strand, 14772707 - 14772838
Alignment:
Q  919 tccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacctttta 1018  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||||| ||||||| |||||||||||||||||    
T  14772707 tccaacgttggacgttcataccaaatgtatttcaccctccttgtgtctccggagttgagtcct-ggttgatttcttccagttgatccttgagacctttta 14772805  T
Q  1019 acgtgacattaatgtaccgaaccttgaacatct 1051  Q
    |||||||||| ||||||||||||||||||||||    
T  14772806 acgtgacattgatgtaccgaaccttgaacatct 14772838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 921 - 1062
Target Start/End: Original strand, 48707086 - 48707227
Alignment:
Q  921 caatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaac 1020  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| ||| ||||||||    
T  48707086 caatgttggacgttcataccaaacgtattccaccctccttgtgtctccagggttgagtccttggttgatttcattcagttgatccttcagatcttttaac 48707185  T
Q  1021 gtgacattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
     |||||||||||||  |||||||||||| |||| ||| ||||    
T  48707186 atgacattaatgtattgaaccttgaacaactgaagatttcca 48707227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 901 - 1053
Target Start/End: Original strand, 31451900 - 31452051
Alignment:
Q  901 aacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagtt 1000  Q
    ||||||||||| ||| | || |||||| ||||||||||||||||||||| |||| ||||||||||| | ||||| |||| |||||||||||| |||| ||    
T  31451900 aacgttattctcccgtcgtctaatgttagacgttcataccaaatgtattccacc-tccttgtgtcttcggggttgagtcgttggttgatttcgtccaatt 31451998  T
Q  1001 aatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctga 1053  Q
     | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31451999 gacccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctga 31452051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 896 - 1047
Target Start/End: Complemental strand, 15471581 - 15471430
Alignment:
Q  896 gacttaacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatc 995  Q
    |||| ||||||||||| ||  | || || |||||| |||||||||||| ||||| ||| |||||||||||||| ||||| || ||||||||||||||||     
T  15471581 gactgaacgttattctcccctcgtcgaacgttggatgttcataccaaacgtattccacactccttgtgtctccggggttgagaccttggttgatttcatt 15471482  T
Q  996 cagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaac 1047  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||| |||||    
T  15471481 cagttgatccttgacaccttttaacgtgaaattaatgtaccgaaccgtgaac 15471430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 944 - 1062
Target Start/End: Original strand, 19262568 - 19262688
Alignment:
Q  944 tgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacc--ttttaacgtgacattaatgtaccgaacc 1041  Q
    |||||||||||||| |||||||| | ||||  ||||||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||| |||||||||    
T  19262568 tgtatttcaccctcattgtgtcttcggggtggagtccttggttgatttcatccagttgatcctcgagaccttttttaacctgacattaatataccgaacc 19262667  T
Q  1042 ttgaacatctgatgatgtcca 1062  Q
    |||||||||||| ||| ||||    
T  19262668 ttgaacatctgaggatttcca 19262688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 5765240 - 5765143
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || ||||| |||||||||||| ||||| ||||| | ||||||||||| ||||| ||||| ||||||||||||| |||||||    
T  5765240 gttggacgtttataccgaacgtattccaccctccttgtatctccggggttgactccttggttgaattcattcagttcatccttgagacctcttaacgt 5765143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 18842473 - 18842345
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| |||||||||||||||||| ||||| | |  |||||||| ||||| ||||| ||||||||||||| ||||||| |    
T  18842473 gttggacgtttataccgaacgtattccaccctccttgtgtctccggggttgactatttggttgaattcattcagttcatccttgagacctcttaacgtta 18842374  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  18842373 caccaaagcaccgaaccttcaacctctga 18842345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 29762393 - 29762490
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || ||||||||||||||||| |||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  29762393 gttggacgtttataccgaaggtgttccaccctccttgtgtctctagggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 29762490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 36909595 - 36909467
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| | ||| || ||||| |||||||||| |||||| |||||| | ||||||||||| || |  ||||| ||||||||||||| ||||||| |    
T  36909595 gttggacgtttacaccgaacgtattccaccctccttatgtctctagggttgactccttggttgaattgagtcagtttatccttgagacctcttaacgtta 36909496  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    || ||| | |||||||||| ||| |||||    
T  36909495 cactaaggcaccgaaccttcaacctctga 36909467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 38046606 - 38046734
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  38046606 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgtta 38046705  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  38046706 caccaaggcaccgaaccttcaacctctga 38046734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 47488209 - 47488337
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| |||||||||||  ||||  ||||| | |||||| |||| ||||| ||||| ||||||||||||| ||||||| |    
T  47488209 gttggacgtttataccgaacgtattccaccctccttgcatctctggggttgactccttgattgaattcattcagttgatccttgagacctcttaacgtta 47488308  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||| || | |||||||||| ||| |||||    
T  47488309 catcaaggcaccgaaccttcaacctctga 47488337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 925 - 1019
Target Start/End: Original strand, 16098104 - 16098198
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaa 1019  Q
    |||||||||| ||||| || ||||| |||||||||||||||||||||||| | | ||||||||| ||||| ||||| ||| |||| |||| ||||    
T  16098104 gttggacgtttataccgaacgtattccaccctccttgtgtctccagggttgactacttggttgaattcattcagttgatctttgatacctcttaa 16098198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 924 - 1022
Target Start/End: Original strand, 24270534 - 24270632
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    ||||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  24270534 tgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 24270632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 926 - 1043
Target Start/End: Original strand, 41875057 - 41875174
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgac 1025  Q
    ||||||||| ||||| ||   ||| ||||||||||||||||   ||||| | ||||||||||| ||||| ||||| ||||||||||||| ||||||| ||    
T  41875057 ttggacgttgataccgaactaattccaccctccttgtgtctttggggttgactccttggttgaattcattcagttgatccttgagacctcttaacgttac 41875156  T
Q  1026 attaatgtaccgaacctt 1043  Q
    || || | ||||||||||    
T  41875157 atcaaggcaccgaacctt 41875174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 924 - 1053
Target Start/End: Original strand, 50068430 - 50068559
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    |||||||| |||||||| ||  |||| ||||||||||| |||||  ||||| | || |||||||| ||||| ||||| ||||||||||||| ||||| |     
T  50068430 tgttggaccttcataccgaacatattccaccctccttgcgtctctggggttgactcgttggttgaattcattcagttgatccttgagacctcttaacatt 50068529  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||| || | |||||||||| ||| |||||    
T  50068530 acatcaaggcaccgaaccttcaacctctga 50068559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 13283739 - 13283612
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| ||||||||| |||||||| ||||| | ||||||||| | ||||| ||||| ||||||||||||| |||| || |    
T  13283739 gttggacgtttataccgaacgtattccaccctcctcgtgtctcc-gggttgactccttggttaaattcattcagttcatccttgagacctcttaatgtta 13283641  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  13283640 caccaaggcaccgaaccttcaacctctga 13283612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 19160351 - 19160223
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| |||| |||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  19160351 gttggacgtttataccaaacgtgttccaccatcctcgtgtctctggggttgactccttggttgaattcagtcagtttatccttgagacctcttaacgtta 19160252  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  19160251 caccaaggcaccgaaccttcaacctctga 19160223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 926 - 1053
Target Start/End: Complemental strand, 17697079 - 17696952
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgac 1025  Q
    ||||||||| |||||||| || || |||||||||| ||||||  |  || | ||||||||||| ||||| ||||| ||||||||||||| ||||||| |     
T  17697079 ttggacgtttataccaaacgtgttccaccctccttatgtctctggcattgactccttggttgaattcattcagttgatccttgagacctcttaacgttat 17696980  T
Q  1026 attaatgtaccgaaccttgaacatctga 1053  Q
    || || | |||||||||| ||| |||||    
T  17696979 atgaaggcaccgaaccttcaacctctga 17696952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 925 - 1043
Target Start/End: Complemental strand, 17372761 - 17372643
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| ||  |||||||||||| ||| |||||  ||||| | ||||||||||  ||||| ||||| ||||||||||||| ||||||| |    
T  17372761 gttggacgtttataccgaacatatttcaccctctttgcgtctctggggttgactccttggttgtattcattcagttgatccttgagacctcttaacgtta 17372662  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || | ||||||||||    
T  17372661 caccaaggcaccgaacctt 17372643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 925 - 1019
Target Start/End: Original strand, 27035490 - 27035584
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaa 1019  Q
    |||||||||| |||||  | ||||| |||||||||||||||||  ||||| | ||||||||||| ||||| || || ||||||||||||| ||||    
T  27035490 gttggacgtttataccggacgtattccaccctccttgtgtctctggggttgactccttggttgaattcattcaattgatccttgagacctcttaa 27035584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 925 - 1019
Target Start/End: Complemental strand, 29436007 - 29435913
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaa 1019  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||    
T  29436007 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaa 29435913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 925 - 1019
Target Start/End: Original strand, 35587101 - 35587195
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaa 1019  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||    
T  35587101 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaa 35587195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 41780727 - 41780630
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||| ||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  41780727 gttggacgtttataccgaacgtgttccacccttcttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 41780630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 44337491 - 44337588
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  44337491 gttggacgtttataccgaaggtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagttgatccttgagacctcttaacgt 44337588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 44597735 - 44597638
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | | ||||||||| ||||  ||||| ||||||||||||| |||||||    
T  44597735 gttggacgtttataccgaaggtgttccaccctccttgtgtctctggggttgacttcttggttgaattcagtcagttgatccttgagacctcttaacgt 44597638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 51269836 - 51269739
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||  || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  51269836 gttggacgtttatacagaaggtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 51269739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 951 - 1022
Target Start/End: Complemental strand, 4209259 - 4209188
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  4209259 caccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 4209188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 925 - 1043
Target Start/End: Original strand, 13635469 - 13635587
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| |||||||||||   ||||| | ||||||||||| ||||  ||||| ||| ||||||||| ||||||| |    
T  13635469 gttggacgtttataccaaacgtgttccaccatccttgtgtctttggggttgactccttggttgaattcagtcagtttatctttgagacctcttaacgtta 13635568  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || | ||||||||||    
T  13635569 caccaaggcaccgaacctt 13635587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 925 - 1043
Target Start/End: Original strand, 14173930 - 14174048
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| || |  ||||| |||||||||| || ||||||| |    
T  14173930 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattaagtcagttcatccttgagatctcttaacgtta 14174029  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || | ||||||||||    
T  14174030 caccaaagcaccgaacctt 14174048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 925 - 1043
Target Start/End: Original strand, 35526349 - 35526467
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || |  || |||||||| ||||||||| ||||| | ||||||||||| ||||  | ||| ||||||||||||| ||||||| |    
T  35526349 gttggacgtttataccgaacgcgttccaccctccctgtgtctccggggttgactccttggttgaattcagtcggttcatccttgagacctcttaacgtta 35526448  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || | ||||||||||    
T  35526449 caccaaggcaccgaacctt 35526467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 951 - 1053
Target Start/End: Complemental strand, 37778100 - 37777998
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatc 1050  Q
    ||||||||||||||||| |||||| | |||||| |||| ||||  ||||| ||||||||||| | ||| ||| |||  |||| |||||||||| ||| ||    
T  37778100 caccctccttgtgtctctagggttgactccttgattgaattcagtcagttcatccttgagacatcttagcgttacaccaatgcaccgaaccttcaacctc 37778001  T
Q  1051 tga 1053  Q
    |||    
T  37778000 tga 37777998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 926 - 1020
Target Start/End: Original strand, 42571949 - 42572043
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaac 1020  Q
    ||||||||| ||||| || || || |||||||||||||||||   |||| | ||||||||||| ||||  ||||| ||||||||||||| |||||    
T  42571949 ttggacgtttataccgaacgtgttccaccctccttgtgtctctgaggttgactccttggttgagttcagtcagttcatccttgagacctcttaac 42572043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 946 - 1040
Target Start/End: Complemental strand, 45689134 - 45689040
Alignment:
Q  946 tatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaac 1040  Q
    |||| ||||||||||||||||   ||||| | || |||||||| ||||| ||||| ||||||||||||| ||||||| |||| || | |||||||    
T  45689134 tattccaccctccttgtgtctttggggttgactctttggttgagttcattcagttgatccttgagacctcttaacgttacatcaaggcaccgaac 45689040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 929 - 974
Target Start/End: Original strand, 22529708 - 22529753
Alignment:
Q  929 gacgttcataccaaatgtatttcaccctccttgtgtctccagggtt 974  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||    
T  22529708 gacgttcataccaaatgtattcaaccctccttgtgtctccggggtt 22529753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 936 - 1053
Target Start/End: Original strand, 46181735 - 46181852
Alignment:
Q  936 ataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtac 1035  Q
    ||||| || ||||| |||| |||||| |||||  ||||| | ||||||||||| ||||| || || ||||||||||||| ||||| | |||| || | ||    
T  46181735 ataccgaacgtattccaccttccttgcgtctctggggttgactccttggttgaattcattcaattgatccttgagacctcttaacattacatcaaggcac 46181834  T
Q  1036 cgaaccttgaacatctga 1053  Q
    |||||||| ||| |||||    
T  46181835 cgaaccttcaacctctga 46181852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 924 - 1013
Target Start/End: Original strand, 49599045 - 49599134
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagacc 1013  Q
    ||||| ||||| ||||| || ||||| ||||||||||| |||||  ||||| | ||||||||||| |||||  |||| ||||||||||||    
T  49599045 tgttgaacgtttataccgaacgtattccaccctccttgcgtctctggggttgactccttggttgaattcatttagttgatccttgagacc 49599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 6435806 - 6435678
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| | |||||||| || |||| || |    
T  6435806 gttggacgtttataccgaacgttttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcaaccttgagaactcttaatgtta 6435707  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  6435706 caccaaggcaccgaaccttcaacctctga 6435678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 955 - 1019
Target Start/End: Complemental strand, 13148295 - 13148231
Alignment:
Q  955 ctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaa 1019  Q
    |||||||||||||  ||||| | ||||||||||| ||||| ||||| ||||||||||||| ||||    
T  13148295 ctccttgtgtctctggggttgactccttggttgaattcattcagttgatccttgagacctcttaa 13148231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 927 - 1027
Target Start/End: Complemental strand, 26793336 - 26793236
Alignment:
Q  927 tggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgaca 1026  Q
    ||||||||||||| |||  ||||| ||||||||||||||||   |||| |||| ||| |||||||||| ||||| ||  || | | ||||||||||||||    
T  26793336 tggacgttcatactaaacatattttaccctccttgtgtctctgtggtttagtctttgcttgatttcattcagttgataatttatatcttttaacgtgaca 26793237  T
Q  1027 t 1027  Q
    |    
T  26793236 t 26793236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 35185004 - 35184876
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || ||||||||||||||||   ||| | | ||||||||||| ||||  ||||| |||||||| |||| ||||||| |    
T  35185004 gttggacgtttataccgaacgtgttccaccctccttgtgtctttggggctgactccttggttgaattcagtcagttcatccttgatacctcttaacgtta 35184905  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  35184904 caccaaggcaccgaaccttcaacctctga 35184876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 925 - 993
Target Start/End: Complemental strand, 35576373 - 35576305
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttca 993  Q
    |||||||||| ||||| || || || |||||||||||||||||||||||| | || |||||||| ||||    
T  35576373 gttggacgtttataccgaacgtgttccaccctccttgtgtctccagggttgactctttggttgaattca 35576305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 925 - 1019
Target Start/End: Original strand, 12791445 - 12791539
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaa 1019  Q
    |||||||||| ||||| || || || |||||| ||||||||||  ||||| | ||||||||||| ||||  ||| | ||||||||||||| ||||    
T  12791445 gttggacgtttataccgaacgtgttccaccctacttgtgtctctggggttgactccttggttgaattcagtcagctcatccttgagacctcttaa 12791539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 925 - 1019
Target Start/End: Complemental strand, 23342675 - 23342581
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaa 1019  Q
    |||||||||| ||||| || || ||||||| |||||||||||   ||||| | ||||||||||| ||||  ||||| |||| |||||||| ||||    
T  23342675 gttggacgtttataccgaacgtgtttcaccttccttgtgtctttggggttgactccttggttgaattcaatcagttcatccctgagacctcttaa 23342581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 952 - 1022
Target Start/End: Original strand, 27486889 - 27486959
Alignment:
Q  952 accctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    ||||||||||||||||  ||||| | ||||||||| | ||||  ||||| ||||||||||||| |||||||    
T  27486889 accctccttgtgtctctggggttgactccttggtttaattcagtcagttcatccttgagacctcttaacgt 27486959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 924 - 1022
Target Start/End: Original strand, 30309997 - 30310095
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    ||||||||||| ||||| || || || |||||||||| |||||   ||||| | ||||||||||| |||| | |||| |||||| |||||| |||||||    
T  30309997 tgttggacgtttataccgaacgtgttccaccctccttatgtctatggggttgactccttggttgaattcagcgagttcatcctttagacctcttaacgt 30310095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 925 - 1043
Target Start/End: Complemental strand, 49396738 - 49396620
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||| |||||   ||||| | || |||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  49396738 gttggacgtttataccgaacgtgttccaccctccttatgtctatggggttgactcgttggttgaattcagtcagttcatccttgagacctcttaacgtta 49396639  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || | ||||||||||    
T  49396638 caccaaggcaccgaacctt 49396620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 929 - 1022
Target Start/End: Original strand, 39224373 - 39224466
Alignment:
Q  929 gacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||   |||| |||||| |||||| |||||||    
T  39224373 gacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtgagttcatcctttagacctcttaacgt 39224466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 83; Significance: 9e-39; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 901 - 1051
Target Start/End: Complemental strand, 5400 - 5250
Alignment:
Q  901 aacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagtt 1000  Q
    ||||||||||| |||   ||||| ||| ||||| |||||||||| ||||  |||||||  ||||||||  |||| |||||||||||||||||||||||||    
T  5400 aacgttattctcccgttgtccaacgttagacgtgcataccaaatctattcaaccctccgcgtgtctcctaggttgagtccttggttgatttcatccagtt 5301  T
Q  1001 aatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatct 1051  Q
     ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5300 gatccttgagaccttttaacatgacattaatgtaccgaaccttgaacatct 5250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 2e-33; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 917 - 1062
Target Start/End: Original strand, 17267464 - 17267609
Alignment:
Q  917 catccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttt 1016  Q
    ||||||| ||||||| || |||| ||| ||||| ||| ||||||||| || | ||||| ||||||||||||||||||| | ||| |||||| ||||||||    
T  17267464 catccaacgttggacattaatactaaacgtattccactctccttgtgcctacggggttgagtccttggttgatttcattcggttgatccttaagaccttt 17267563  T
Q  1017 taacgtgacattaatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
    |||||||||||||||||||||||||||||||| |||| ||| ||||    
T  17267564 taacgtgacattaatgtaccgaaccttgaacaactgaggatttcca 17267609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 49218907 - 49219035
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || ||||||||||||||||| |||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  49218907 gttggacgtttataccaaaggtgttccaccctccttgtgtctctagggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgtta 49219006  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  49219007 caccaaggcaccgaaccttcaacctctga 49219035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 49273447 - 49273319
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| ||||| || ||||||||||||||||| |||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  49273447 gttggacgtttataccgaatgtgttccaccctccttgtgtctctagggttgattccttggttgaattcagtcagttcatccttgagacctcttaacgtta 49273348  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  49273347 caccaaggcaccgaaccttcaacctctga 49273319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 8633530 - 8633627
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||| ||| |||||||| ||||| |||||||||||||||||| | ||| | ||||||||||| ||||| ||||| |||| |||||||| |||||||    
T  8633530 gttggatgtttataccaaacgtattccaccctccttgtgtctcctgtgttaactccttggttgaattcattcagttcatccatgagacctcttaacgt 8633627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 44927511 - 44927414
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||||||||||| ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  44927511 gttggacgtttataccgaacgtgttccaccctccttgtgtctccggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 44927414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 924 - 1053
Target Start/End: Complemental strand, 46403052 - 46402923
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||  ||||||||||||| |||||||     
T  46403052 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagtgtatccttgagacctcttaacgtt 46402953  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  46402952 acaccaaggcaccgaacctttaacctctga 46402923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 924 - 1053
Target Start/End: Original strand, 49140224 - 49140353
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||  ||||||||||||| |||||||     
T  49140224 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagtgtatccttgagacctcttaacgtt 49140323  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  49140324 acaccaaggcaccgaaccttcaacctctga 49140353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 924 - 1053
Target Start/End: Complemental strand, 54390491 - 54390362
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||  ||||||||||||| |||||||     
T  54390491 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagtgtatccttgagacctcttaacgtt 54390392  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  54390391 acaccaaggcaccgaaccttcaacctctga 54390362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 927 - 1027
Target Start/End: Complemental strand, 4095843 - 4095743
Alignment:
Q  927 tggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgaca 1026  Q
    ||||||||| ||||||| |||||||||||||||| |||||    |||| ||||||| ||||||||||| ||||| ||| || ||| ||||||||||||||    
T  4095843 tggacgttcgtaccaaacgtatttcaccctccttatgtctatgtggttgagtcctttgttgatttcattcagttgatcattcagatcttttaacgtgaca 4095744  T
Q  1027 t 1027  Q
    |    
T  4095743 t 4095743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 926 - 1022
Target Start/End: Complemental strand, 27186995 - 27186899
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||| || |||| ||| ||||| |||||||||||||||||  ||||| | ||||||||||| ||||| ||||| ||||||||||||| |||||||    
T  27186995 ttggacatttatactaaacgtattccaccctccttgtgtctctggggttgactccttggttgaattcattcagttcatccttgagacctcttaacgt 27186899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 51695777 - 51695905
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  51695777 gttggacgtttataccgaaggtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttgatccttgagacctcttaacgtta 51695876  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  51695877 caccaaggcaccgaaccttcaacttctga 51695905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 951 - 1053
Target Start/End: Complemental strand, 42383073 - 42382971
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatc 1050  Q
    ||||||||||  |||||  ||||| | ||||||||||| ||||| ||||| ||||||||||||| ||||||| |||| || | |||||||||| ||||||    
T  42383073 caccctccttacgtctctggggttgactccttggttgaattcattcagttgatccttgagacctcttaacgttacatcaaggcaccgaaccttcaacatc 42382974  T
Q  1051 tga 1053  Q
    |||    
T  42382973 tga 42382971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 10053442 - 10053539
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    ||||||| || ||||| |||||||| |||||||||||||||||    ||| | ||||||||||| |||| |||||| ||||||||||||| |||||||    
T  10053442 gttggacatttataccgaatgtattccaccctccttgtgtctctcaagtttactccttggttgaattcagccagttcatccttgagacctcttaacgt 10053539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 924 - 1053
Target Start/End: Complemental strand, 42382320 - 42382191
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||  || ||| | ||||||||||  |||||  ||||| | ||||||||||| ||||| ||||| ||||||||||||  |||||||     
T  42382320 tgttggacgtttatactgaacgtagtccaccctccttacgtctctggggttgactccttggttgaattcattcagttgatccttgagaccacttaacgtt 42382221  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||| || | |||||||||| |||||||||    
T  42382220 acatcaaggcaccgaaccttcaacatctga 42382191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 926 - 1043
Target Start/End: Original strand, 53826868 - 53826985
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgac 1025  Q
    ||||||||| ||||| || ||||| ||||||||||| |||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |     
T  53826868 ttggacgtttataccgaacgtattccaccctccttgcgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgttaa 53826967  T
Q  1026 attaatgtaccgaacctt 1043  Q
    || || | ||||||||||    
T  53826968 atcaaggcaccgaacctt 53826985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 13896041 - 13896169
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || ||||||||||||||||| |||||| | || |||||||| ||||  ||||| ||||||||||||| |||| || |    
T  13896041 gttggacgtttataccgaacgtgttccaccctccttgtgtctctagggttgactcattggttgaattcagtcagttcatccttgagacctcttaatgtta 13896140  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  13896141 caccaaggcaccgaaccttcaacctctga 13896169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 14265456 - 14265328
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||| ||| ||||| || ||||| |||| ||||||||||||  ||||| | ||||||||||| ||||| ||||| |||||| |||||  ||||| |||    
T  14265456 gttggatgtttataccgaacgtattccaccttccttgtgtctctggggttgactccttggttgaattcattcagttgatccttaagaccacttaacatga 14265357  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || |||||||||||| ||| |||||    
T  14265356 caccaaggtaccgaaccttcaacctctga 14265328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 956 - 1052
Target Start/End: Original strand, 20378089 - 20378185
Alignment:
Q  956 tccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctg 1052  Q
    ||||||||||||| ||||| | ||||||||||| |||||  |||| |||||| |||||| ||||||||||| ||| | |||||||||| ||| ||||    
T  20378089 tccttgtgtctccggggttgactccttggttgaattcatttagttgatcctttagacctcttaacgtgacactaaggcaccgaaccttcaacctctg 20378185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 36135056 - 36134928
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| |||||||||||| |||||| | || |||||||| | ||  ||||| ||||||||||||| ||||||| |    
T  36135056 gttggacgtttataccaaacgtgttccaccatccttgtgtctctagggttgactcattggttgaatccagtcagttcatccttgagacctcttaacgtta 36134957  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  36134956 caccaaggcaccgaaccttcaacctctga 36134928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 945 - 1053
Target Start/End: Original strand, 44835678 - 44835786
Alignment:
Q  945 gtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttg 1044  Q
    ||||| ||||||||||| ||||| |||||| | ||||||||||| |||||  |||| |||||| |||||| ||||||| |||| || | ||||||||||     
T  44835678 gtattccaccctccttgcgtctctagggttgactccttggttgaattcatttagttgatccttaagacctcttaacgttacatcaaggcaccgaaccttc 44835777  T
Q  1045 aacatctga 1053  Q
    ||| |||||    
T  44835778 aacctctga 44835786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 46414505 - 46414633
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||| ||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  46414505 gttggatgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgtta 46414604  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  46414605 caccaaggcaccgaaccttcaacctctga 46414633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 47065735 - 47065607
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||  || ||||| |||||||||||||||||  | ||| | ||||||||||| ||||| ||||| ||||||||||||| |||| || |    
T  47065735 gttggacgtttatactgaacgtattccaccctccttgtgtctctggagttgactccttggttgaattcattcagttgatccttgagacctcttaatgtta 47065636  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||| || | ||| |||||| ||| |||||    
T  47065635 catcaaggcaccaaaccttcaacctctga 47065607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 49610537 - 49610409
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||| | || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  49610537 gttggacgtttatatcgaaggtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttgatccttgagacctcttaacgtta 49610438  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  49610437 caccaaggcaccgaaccttcaacctctga 49610409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 51013449 - 51013577
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||| ||||||||| ||||||| |    
T  51013449 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatcattgagacctcttaacgtta 51013548  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  51013549 caccaaggcaccgaaccttcaacctctga 51013577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 925 - 1043
Target Start/End: Original strand, 39417119 - 39417237
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| ||   ||| ||||||||||||||||    |||| | ||||||||||| ||||| ||||| ||||||||||||| ||||||| |    
T  39417119 gttggacgtttataccgaactaattccaccctccttgtgtctttgaggttgactccttggttgaattcattcagttgatccttgagacctcttaacgtta 39417218  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||| || | ||||||||||    
T  39417219 catcaaggcaccgaacctt 39417237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 925 - 1043
Target Start/End: Complemental strand, 43569958 - 43569840
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||| ||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  43569958 gttggacgtttataccgaacgtgttccaccctccttctgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgtta 43569859  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || | ||||||||||    
T  43569858 caccaaggcaccgaacctt 43569840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 2428535 - 2428438
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||| ||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  2428535 gttggacgtttataccgaacgtgttccaccctccttctgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 2428438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 936 - 1053
Target Start/End: Original strand, 4004269 - 4004386
Alignment:
Q  936 ataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtac 1035  Q
    |||||||| || || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |||  || | ||    
T  4004269 ataccaaacgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgttacaccaaggcac 4004368  T
Q  1036 cgaaccttgaacatctga 1053  Q
    |||||||| ||| |||||    
T  4004369 cgaaccttcaacctctga 4004386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 11378915 - 11379012
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||||||||||| | ||| | |||||||| || ||||  ||||| ||||||||||||| |||||||    
T  11378915 gttggacgtttataccgaacgtgttccaccctccttgtgtctccggtgttgactccttggtagaattcagtcagttcatccttgagacctcttaacgt 11379012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 14631493 - 14631396
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||||||||||   |||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  14631493 gttggacgtttataccgaacgtgttccaccctccttgtgtctctgaggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 14631396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 924 - 1053
Target Start/End: Complemental strand, 34049776 - 34049647
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||| ||||| ||||||||||| || |||| ||||||||||||  ||||| | ||||||||||| ||||  ||||  ||||||||||||| |||| ||     
T  34049776 tgttgaacgtttataccaaatgtgttccaccatccttgtgtctctggggttgactccttggttgaattcagtcagtgtatccttgagacctcttaatgtt 34049677  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  34049676 acaccaaggcaccgaaccttcaacctctga 34049647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 34472247 - 34472344
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| ||||| || ||||||||||||||||    |||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  34472247 gttggacgtttataccgaatgtgttccaccctccttgtgtctttgaggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 34472344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 3495200 - 3495328
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||| |||| || || |||| ||||||||||||  ||||| | || |||||||| || |   |||| ||||||||||||||||||||| |    
T  3495200 gttggacgtttatatcaaacgtgttccaccatccttgtgtctctggggttgactcattggttgaatttagttagtttatccttgagaccttttaacgtta 3495299  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || |||||||||||| ||| |||||    
T  3495300 caccaaggtaccgaaccttcaacctctga 3495328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 928 - 1028
Target Start/End: Original strand, 29635077 - 29635177
Alignment:
Q  928 ggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacat 1027  Q
    |||||||||||||||| || || |||||||||||||| | || |||| |||| || | ||||||||||||||  |||||| |||  ||||||| ||||||    
T  29635077 ggacgttcataccaaacgtcttccaccctccttgtgtattcacggttgagtcgttagatgatttcatccagtcgatccttcagatattttaacctgacat 29635176  T
Q  1028 t 1028  Q
    |    
T  29635177 t 29635177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 51015325 - 51015197
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || ||||||||||||||||   ||||  | ||||||||||| ||||  ||||| ||||||||||||| ||||||| |    
T  51015325 gttggacgtttataccgaacgtgttccaccctccttgtgtctttggggtcgactccttggttgaattcagtcagttcatccttgagacctcttaacgtta 51015226  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  51015225 caccaaggcaccgaaccttcaacctctga 51015197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 924 - 1022
Target Start/End: Complemental strand, 7954252 - 7954154
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    ||||||||||| || || || ||||| |||||||||||||||||| ||||| | | | | ||||| ||||| |||||  |||||||||||| |||||||    
T  7954252 tgttggacgtttatgccgaacgtattccaccctccttgtgtctccggggttgactacctagttgaattcattcagttcttccttgagacctcttaacgt 7954154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 925 - 1019
Target Start/End: Complemental strand, 30192586 - 30192492
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaa 1019  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| || |||||||||| ||||    
T  30192586 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatacttgagacctcttaa 30192492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 945 - 1022
Target Start/End: Original strand, 33449330 - 33449407
Alignment:
Q  945 gtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    ||||||||||||||||||||||   ||||| | |||||| |||  ||||| ||||| ||| |||||||||||||||||    
T  33449330 gtatttcaccctccttgtgtctttggggttgactccttgattggattcattcagttgatctttgagaccttttaacgt 33449407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 34647438 - 34647535
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||  || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| |||||||||| || |||||||    
T  34647438 gttggacgtttatactgaacgtgttccaccctccttgtgtctcgggggttgactccttggttgaattcagtcagttcatccttgagatctcttaacgt 34647535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 24702442 - 24702570
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || ||||||||||||||||   ||||| | ||||||||| | ||||  ||||| ||| ||||||||| ||||||| |    
T  24702442 gttggacgtttataccgaacgtgttccaccctccttgtgtctatggggttgactccttggttcaattcagtcagttcatctttgagacctcttaacgtta 24702541  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  24702542 caccaaggcaccgaacctttaacctctga 24702570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 34693461 - 34693588
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||  || || || ||||||||||||||||| ||| || | ||||||||| | ||||  ||||| ||||||||||||| ||||||| |    
T  34693461 gttggacgtttatactgaaggtgttccaccctccttgtgtctcaagg-ttaactccttggttaaattcagtcagttcatccttgagacctcttaacgtta 34693559  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  34693560 caccaaggcaccgaaccttcaacctctga 34693588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 41803950 - 41803823
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||| ||||| ||||| || || || |||||||||| ||||||  ||||| | ||||||||||| ||||  ||||| |||||||||||| |||||||| |    
T  41803950 gttgaacgtttataccgaacgtgttccaccctccttttgtctctggggttgactccttggttgaattcagtcagttcatccttgagacc-tttaacgtca 41803852  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | ||||||| || |||||||||    
T  41803851 caccaaggcaccgaactttcaacatctga 41803823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 926 - 1022
Target Start/End: Original strand, 42328288 - 42328384
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    ||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||| ||| ||||  ||||| |||||| |||||| |||||||    
T  42328288 ttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgattccttggctgaattcagtcagttcatcctttagacctcttaacgt 42328384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 46346751 - 46346874
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||  || || || |||||||||||||||||     || | ||||||||||| |||| |||||| ||||||||||||| ||||||| |    
T  46346751 gttggacgtttatacggaacgtgttccaccctccttgtgtctc-----ttgactccttggttgaattcagccagttcatccttgagacctcttaacgtta 46346845  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  46346846 caccaaggcaccgaaccttcaacctctga 46346874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 925 - 1052
Target Start/End: Original strand, 2268665 - 2268792
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||||||  | || |||| |||||||||||   ||||| | ||||||||||| ||||  ||||| |||||| |||||| ||||||| |    
T  2268665 gttggacgtttataccaaacttgttccaccatccttgtgtctttggggttgactccttggttgaattcaatcagttcatccttaagacctcttaacgtta 2268764  T
Q  1025 cattaatgtaccgaaccttgaacatctg 1052  Q
    ||  || | |||||||||| ||| ||||    
T  2268765 caccaaggcaccgaaccttcaacctctg 2268792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 928 - 994
Target Start/End: Complemental strand, 17370843 - 17370776
Alignment:
Q  928 ggacgttcataccaaatgtatttcaccctccttgtgtctccaggg-ttcagtccttggttgatttcat 994  Q
    |||||| ||||| ||| || || |||||||||||||||||| ||| || |||||||||||||||||||    
T  17370843 ggacgtccatacaaaacgtcttccaccctccttgtgtctcctggggttaagtccttggttgatttcat 17370776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 926 - 1053
Target Start/End: Original strand, 19453401 - 19453528
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgac 1025  Q
    ||||||||| ||| | || || || |||||||||| | ||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| ||||||| ||    
T  19453401 ttggacgtttatatcgaacgtgttccaccctccttctatctctggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgttac 19453500  T
Q  1026 attaatgtaccgaaccttgaacatctga 1053  Q
    | |||  |||| |||||| ||| |||||    
T  19453501 actaagttacctaaccttcaacctctga 19453528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 925 - 1012
Target Start/End: Original strand, 25576762 - 25576849
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagac 1012  Q
    |||||| ||| ||||| || ||||| ||||||||||| |||||  ||||| | ||||| ||||| ||||| ||||| |||||||||||    
T  25576762 gttggatgtttataccgaacgtattccaccctccttgcgtctctggggttgaatccttagttgaattcattcagttgatccttgagac 25576849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 925 - 1043
Target Start/End: Original strand, 2647047 - 2647165
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| |||||||| || || |||| ||||||||||||  ||||| | || || ||||| ||||  ||||| ||||||||||| | ||||||| |    
T  2647047 gttggacgtttataccaaacgtgttccaccatccttgtgtctctggggttgactctttcgttgaattcagtcagtttatccttgagacatcttaacgtta 2647146  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || | ||||||||||    
T  2647147 caccaaggcaccgaacctt 2647165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 925 - 1043
Target Start/End: Original strand, 48087723 - 48087841
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| ||   ||| |||| |||||||||||   ||||| | ||||||||||| ||||| |  || ||||||||||||| ||||||| |    
T  48087723 gttggacgtttataccgaactaattccaccatccttgtgtctttggggttgactccttggttgaattcattcgtttgatccttgagacctcttaacgtta 48087822  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||| || | ||||||||||    
T  48087823 catcaaggcaccgaacctt 48087841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 981 - 1043
Target Start/End: Original strand, 55207102 - 55207164
Alignment:
Q  981 ttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaacctt 1043  Q
    |||||||| ||||  ||||| ||||||||||||||||||||| ||| ||| | ||||||||||    
T  55207102 ttggttgaattcagtcagttcatccttgagaccttttaacgtcacactaaggcaccgaacctt 55207164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 52569579 - 52569676
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| ||||| || |||| ||||| ||||||  ||| | | ||||||||||| ||||   |||| ||||||||||||| |||||||    
T  52569579 gttggacgtttataccgaatgtgttccaccatccttttgtctctggggctgactccttggttgaattcagttagttcatccttgagacctcttaacgt 52569676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 954 - 1027
Target Start/End: Original strand, 55390976 - 55391049
Alignment:
Q  954 cctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacat 1027  Q
    ||||||||||||||  | ||| |||| ||||||| |||||| ||||| ||| || ||| |||||||||||||||    
T  55390976 cctccttgtgtctctggagttgagtcattggttgctttcattcagttgatcatttagatcttttaacgtgacat 55391049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 3e-32; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 893 - 1048
Target Start/End: Original strand, 12504862 - 12505017
Alignment:
Q  893 gtcgacttaacgttattcttccgccatccaatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttc 992  Q
    ||||||| ||||||||||| ||  ||||  | | ||||| ||||||||||| ||||| |||||||||||||||||  ||||| ||| ||| |||||||||    
T  12504862 gtcgactgaacgttattctcccatcatcgtacgatggacattcataccaaacgtattccaccctccttgtgtctctggggttgagttcttcgttgatttc 12504961  T
Q  993 atccagttaatccttgagaccttttaacgtgacattaatgtaccgaaccttgaaca 1048  Q
    ||  |||| ||| ||||||||||||||| |||||||||||||||||||||||||||    
T  12504962 atttagttgatcattgagaccttttaacatgacattaatgtaccgaaccttgaaca 12505017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 31171986 - 31172114
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| |||||||||||||||||| ||||| | ||||| ||||| |||||  |||| |||||||||||||||||| ||||    
T  31171986 gttggacgtttataccgaacgtattccaccctccttgtgtctccggggttgactccttagttgaattcattaagttgatccttgagaccttttaatgtga 31172085  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || |||||||||||| ||| |||||    
T  31172086 caccaaggtaccgaaccttcaacctctga 31172114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 927 - 1022
Target Start/End: Original strand, 22843495 - 22843590
Alignment:
Q  927 tggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    ||||||||||||||||| ||||| |||||||||||||| | | ||||| |||| ||||||||||||||| |||| |||||| ||| ||||||||||    
T  22843495 tggacgttcataccaaacgtattccaccctccttgtgttttcggggttaagtcattggttgatttcatctagttgatccttcagatcttttaacgt 22843590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 28706312 - 28706440
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| ||||||||||| |||||  ||||| | ||||||||||| |||||  |||| ||||||| ||||||||||||| |    
T  28706312 gttggacgtttataccgaacgtattccaccctccttgcgtctctggggttgactccttggttgaattcatttagttgatccttgggaccttttaacgtta 28706411  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||| || | |||||||||| ||| |||||    
T  28706412 catcaaggcaccgaaccttcaacctctga 28706440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 34614997 - 34614900
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||||||||||| ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  34614997 gttggacgtttataccgaacgtgttccaccctccttgtgtctccggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 34614900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 24861387 - 24861259
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || ||||||||||||||||| |||||| | ||||||||||| ||||  ||||| |||||||| |||| ||||||| |    
T  24861387 gttggacgtttataccgaaggtgttccaccctccttgtgtctctagggttgactccttggttgaattcagtcagttcatccttgatacctcttaacgtta 24861288  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    |||  | | |||||||||| ||| |||||    
T  24861287 catccaggcaccgaacctttaacctctga 24861259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 925 - 1043
Target Start/End: Complemental strand, 16575736 - 16575618
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| |||||||||||||||| |  |||| | ||| ||||||| ||||| |||||  |||||||||||| ||||||| |    
T  16575736 gttggacgtttataccgaacgtattccaccctccttgtgtcttcgaggttgactccctggttgaattcattcagttcgtccttgagacctcttaacgtta 16575637  T
Q  1025 cattaatgtaccgaacctt 1043  Q
    ||  || ||||||||||||    
T  16575636 caccaaggtaccgaacctt 16575618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 925 - 1027
Target Start/End: Original strand, 43638847 - 43638948
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || ||||| ||||||||||| | |||  ||||| ||||||||||||| ||||| ||||| ||||||||||||| ||||||| |    
T  43638847 gttggacgtttataccgaacgtattccaccctccttgcg-ctctggggttgagtccttggttgaattcattcagttgatccttgagacctcttaacgtta 43638945  T
Q  1025 cat 1027  Q
    |||    
T  43638946 cat 43638948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 924 - 1053
Target Start/End: Original strand, 485427 - 485556
Alignment:
Q  924 tgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtg 1023  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||  |||||   ||||||||||| ||||  ||||  ||||||||||||| |||||||     
T  485427 tgttggacgtttataccaaatgtgttccaccatccttgtgtctctggggttggctccttggttgaattcagtcagtgtatccttgagacctcttaacgtt 485526  T
Q  1024 acattaatgtaccgaaccttgaacatctga 1053  Q
    |||  || | |||||||||| ||| |||||    
T  485527 acaccaaggcaccgaaccttcaacctctga 485556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 922 - 1019
Target Start/End: Original strand, 12785368 - 12785465
Alignment:
Q  922 aatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaa 1019  Q
    |||| ||||| |||||||||||  | || ||||||| ||||||||||  |||| |||| |||||||||||||||||||| |||||| ||| |||||||    
T  12785368 aatgatggacattcataccaaacttcttccaccctctttgtgtctccgtggttgagtcattggttgatttcatccagttgatccttcagatcttttaa 12785465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 19242332 - 19242429
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  19242332 gttggacgtttataccgaacgtgttccaccctccttgtgtctctcgggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 19242429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 19315516 - 19315613
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  19315516 gttggacgtttataccgaacgtgttccaccctccttgtgtctctcgggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 19315613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 922 - 1053
Target Start/End: Complemental strand, 2416962 - 2416831
Alignment:
Q  922 aatgttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacg 1021  Q
    ||||||||||||| ||||| || || || |||||||||||||| ||  ||||| | | ||||||||| ||||  ||||| ||||||||||||| ||||||    
T  2416962 aatgttggacgtttataccgaaggtgttccaccctccttgtgtttctggggttgacttcttggttgaattcagtcagttgatccttgagacctcttaacg 2416863  T
Q  1022 tgacattaatgtaccgaaccttgaacatctga 1053  Q
    | |||  || | |||||||||| ||| |||||    
T  2416862 ttacaccaaggcaccgaaccttcaacctctga 2416831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 951 - 1022
Target Start/End: Complemental strand, 41363674 - 41363603
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||||||||||| ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  41363674 caccctccttgtgtctccggggttgactccttggttgaattcagtcagttcatccttgagacctcttaacgt 41363603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 925 - 1063
Target Start/End: Complemental strand, 26140197 - 26140059
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||| ||||||||| ||||  ||||||| ||| ||||||||| |  || |  |||||||||||||||||| ||  | |||| | |||||||||||| |||    
T  26140197 gttgaacgttcataacaaacatatttcatccttcttgtgtcttcgtgggtgtgtccttggttgatttcattcaaatgatccgtcagaccttttaacatga 26140098  T
Q  1025 cattaatgtaccgaaccttgaacatctgatgatgtccat 1063  Q
    || |||||||||||| ||||| || |||| ||| |||||    
T  26140097 caataatgtaccgaaacttgagcaactgaggatttccat 26140059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 15032494 - 15032591
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| |||||||| || || |||| | ||||||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||| |||||||    
T  15032494 gttggacgtttataccaaacgtgttccaccatacttgtgtctctggggttgactccttggttgaattcaatcagtttatccttgagacctcttaacgt 15032591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 925 - 1022
Target Start/End: Original strand, 38034095 - 38034192
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||| ||||| ||||| || || || ||||||||||||||||   ||||| | ||||||||||||||||  ||||| ||||||||||||| |||||||    
T  38034095 gttgaacgtttataccgaacgtgttccaccctccttgtgtctttggggttgactccttggttgatttcagtcagttcatccttgagacctcttaacgt 38034192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 926 - 1043
Target Start/End: Complemental strand, 42603497 - 42603380
Alignment:
Q  926 ttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgac 1025  Q
    ||||||||| ||||| || || || | |||||||| ||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||||||||||| ||    
T  42603497 ttggacgtttataccgaacgtgttccgccctccttctgtctctggggttgactccttggttgaattcagtcagttcatccttgagaccttttaacgtcac 42603398  T
Q  1026 attaatgtaccgaacctt 1043  Q
    |  || | ||||||||||    
T  42603397 accaaggcaccgaacctt 42603380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Original strand, 18440465 - 18440593
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | |||||| |||| ||||  ||||| ||||||||||| | ||||||| |    
T  18440465 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttgattgaattcagtcagttcatccttgagacatcttaacgtta 18440564  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  18440565 caccaaggcaccgaaccttcaacctctga 18440593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 26452369 - 26452241
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | | ||||||||| ||||  ||||| |||||||||| || ||||||| |    
T  26452369 gttggacgtttataccgaaggtgttccaccctccttgtgtctctggggttgaattcttggttgaattcagtcagttgatccttgagatctcttaacgtta 26452270  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  26452269 caccaaggcaccgaaccttcaacctctga 26452241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 925 - 1053
Target Start/End: Complemental strand, 40702404 - 40702276
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||  || || || ||| |||||| ||||||  ||||| | ||||||||||| ||||  ||||| ||||||||||||||||||||| |    
T  40702404 gttggacgtttatactgaacgtgttccactctccttctgtctctggggttgactccttggttgaattcagtcagttcatccttgagaccttttaacgtca 40702305  T
Q  1025 cattaatgtaccgaaccttgaacatctga 1053  Q
    ||  || | |||||||||| ||| |||||    
T  40702304 caccaaggcaccgaaccttcaacctctga 40702276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 22548307 - 22548210
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||| | ||||| || |||||||||||||||||  ||||| | ||||| ||||| ||||  ||||| ||||||||||| | |||||||    
T  22548307 gttggacgtttatatcgaatgtgttccaccctccttgtgtctctggggttgactccttagttgaattcagtcagttcatccttgagacatcttaacgt 22548210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 978 - 1043
Target Start/End: Original strand, 33799774 - 33799839
Alignment:
Q  978 tccttggttgatttcatccagttaatccttgagaccttttaacgtgacattaatgtaccgaacctt 1043  Q
    ||||||||||| ||||| ||||| ||||||||||||| ||||||| |||| || | ||||||||||    
T  33799774 tccttggttgaattcattcagttgatccttgagacctcttaacgttacatcaaggcaccgaacctt 33799839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 925 - 1040
Target Start/End: Complemental strand, 40415301 - 40415186
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || || || |||||||||||||||||  | | | | ||||||||||| |||| | |||| |||||| |||||| ||||||| |    
T  40415301 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggtgctgactccttggttgaattcagcgagttcatcctttagacctcttaacgtta 40415202  T
Q  1025 cattaatgtaccgaac 1040  Q
    ||| || | |||||||    
T  40415201 catcaaggcaccgaac 40415186  T

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Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 929 - 1020
Target Start/End: Complemental strand, 41275434 - 41275343
Alignment:
Q  929 gacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaac 1020  Q
    |||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||  ||||| |||||| |||||| |||||    
T  41275434 gacgtttataccgaaggtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtcagttcatccttaagacctcttaac 41275343  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 925 - 1027
Target Start/End: Original strand, 42169130 - 42169232
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtga 1024  Q
    |||||||||| ||||| || |  || ||||||||| |||||||| ||||| | ||||||||||| ||||    ||| ||||||||||||| ||||||| |    
T  42169130 gttggacgtttataccgaacgcgttccaccctcctcgtgtctccggggttgactccttggttgaattcagttggttcatccttgagacctcttaacgtta 42169229  T
Q  1025 cat 1027  Q
    |||    
T  42169230 cat 42169232  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 925 - 1019
Target Start/End: Complemental strand, 43693181 - 43693087
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaa 1019  Q
    |||||||||| ||||| || || || |||||||||||||||||  ||||| | ||||||||||| ||||   |||| |||||| |||||| ||||    
T  43693181 gttggacgtttataccgaacgtgttccaccctccttgtgtctctggggttgactccttggttgaattcagtgagttcatcctttagacctcttaa 43693087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1002 - 1063
Target Start/End: Complemental strand, 26140014 - 26139953
Alignment:
Q  1002 atccttgagaccttttaacgtgacattaatgtaccgaaccttgaacatctgatgatgtccat 1063  Q
    |||||| |||||||||||| ||||| |||||||||||| ||||| || |||| ||| |||||    
T  26140014 atccttcagaccttttaacatgacaataatgtaccgaaacttgagcaactgaggatttccat 26139953  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 26484621 - 26484524
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || ||||||||||||||||   ||||| | ||||||||||| ||||   | || ||||||||||||| |||||||    
T  26484621 gttggacgtttataccgaacgtgttccaccctccttgtgtctttggggttgactccttggttgaattcagttaattcatccttgagacctcttaacgt 26484524  T

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Target: scaffold0027 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 928 - 1062
Target Start/End: Complemental strand, 36688 - 36554
Alignment:
Q  928 ggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgtgacat 1027  Q
    |||||||||||||||| ||||| |||  ||| ||||||||| ||||| || |||||||||||||||| ||| | ||| |||||| |||||||| ||||||    
T  36688 ggacgttcataccaaacgtattccacgttccatgtgtctcctgggttgagaccttggttgatttcattcagctgatctttgagagcttttaacatgacat 36589  T
Q  1028 taatgtaccgaaccttgaacatctgatgatgtcca 1062  Q
    ||||||||| |||||| |||| |||| ||| ||||    
T  36588 taatgtaccaaaccttaaacaactgaggatttcca 36554  T

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Target: scaffold0589 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 925 - 1022
Target Start/End: Complemental strand, 2303 - 2206
Alignment:
Q  925 gttggacgttcataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    |||||||||| ||||| || || || |||||||||||||||||| ||||| | ||||||||||| ||||  || || ||||||||||||| |||||||    
T  2303 gttggacgtttataccgaacgtgttccaccctccttgtgtctccggggttgactccttggttgaattcagtcatttcatccttgagacctcttaacgt 2206  T

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Target: scaffold0181 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 936 - 1022
Target Start/End: Complemental strand, 24930 - 24844
Alignment:
Q  936 ataccaaatgtatttcaccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaacgt 1022  Q
    ||||| || ||||| |||||||||||||||||| ||||| | ||| ||||||| || | |||||| ||||||||||||| |||||||    
T  24930 ataccgaacgtattccaccctccttgtgtctccggggttgactccctggttgaatttagccagttcatccttgagacctcttaacgt 24844  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 951 - 1020
Target Start/End: Complemental strand, 63986 - 63917
Alignment:
Q  951 caccctccttgtgtctccagggttcagtccttggttgatttcatccagttaatccttgagaccttttaac 1020  Q
    |||||||||||||||||  ||||| | ||||| ||||| ||||| ||||| ||||||||| ||| |||||    
T  63986 caccctccttgtgtctctggggttgactcctttgttgaattcattcagttcatccttgaggcctcttaac 63917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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