View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5639_low_11 (Length: 271)

Name: NF5639_low_11
Description: NF5639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5639_low_11
NF5639_low_11
[»] chr8 (42 HSPs)
chr8 (1-171)||(18305983-18306153)
chr8 (1-171)||(32497539-32497709)
chr8 (1-171)||(7466349-7466519)
chr8 (1-171)||(16362210-16362380)
chr8 (1-171)||(42305807-42305977)
chr8 (1-171)||(19717893-19718073)
chr8 (1-171)||(14782147-14782327)
chr8 (1-171)||(44725822-44726002)
chr8 (4-164)||(18958746-18958916)
chr8 (1-171)||(39467480-39467660)
chr8 (1-171)||(9288469-9288649)
chr8 (11-171)||(10295392-10295563)
chr8 (1-118)||(31623709-31623826)
chr8 (1-164)||(4031297-4031450)
chr8 (1-156)||(26856080-26856246)
chr8 (12-171)||(37857144-37857303)
chr8 (6-171)||(43166702-43166877)
chr8 (4-171)||(4403124-4403301)
chr8 (1-171)||(41479111-41479281)
chr8 (1-171)||(26374442-26374622)
chr8 (4-171)||(24501825-24502002)
chr8 (1-171)||(42938129-42938309)
chr8 (1-119)||(32711356-32711474)
chr8 (1-171)||(42937367-42937545)
chr8 (1-171)||(2704831-2705011)
chr8 (1-171)||(10392249-10392429)
chr8 (1-171)||(43959672-43959841)
chr8 (1-171)||(5576632-5576813)
chr8 (1-171)||(7506911-7507091)
chr8 (4-117)||(42735353-42735466)
chr8 (1-117)||(23115245-23115360)
chr8 (59-130)||(13478313-13478384)
chr8 (67-115)||(39189892-39189940)
chr8 (60-133)||(41070018-41070091)
chr8 (65-117)||(8410474-8410526)
chr8 (59-117)||(4950092-4950150)
chr8 (68-116)||(9770497-9770545)
chr8 (121-164)||(31623819-31623862)
chr8 (7-40)||(4302813-4302846)
chr8 (6-51)||(18958911-18958956)
chr8 (11-43)||(32497465-32497497)
chr8 (7-43)||(37567365-37567401)
[»] chr2 (43 HSPs)
chr2 (1-156)||(7026619-7026774)
chr2 (1-171)||(28740308-28740478)
chr2 (1-171)||(3463687-3463857)
chr2 (4-171)||(13833447-13833614)
chr2 (1-171)||(18177282-18177462)
chr2 (1-171)||(33135638-33135817)
chr2 (1-171)||(28844570-28844750)
chr2 (1-169)||(10657421-10657599)
chr2 (1-118)||(3574862-3574979)
chr2 (1-171)||(25288174-25288354)
chr2 (1-156)||(26788799-26788966)
chr2 (1-171)||(6224582-6224743)
chr2 (11-171)||(378962-379122)
chr2 (1-156)||(10125330-10125487)
chr2 (1-171)||(16269706-16269886)
chr2 (1-171)||(24776370-24776550)
chr2 (1-171)||(20605251-20605431)
chr2 (1-171)||(31170639-31170819)
chr2 (1-171)||(305480-305660)
chr2 (1-171)||(12407395-12407575)
chr2 (1-171)||(14198592-14198772)
chr2 (1-108)||(43847661-43847768)
chr2 (1-171)||(22551778-22551958)
chr2 (1-101)||(215320-215420)
chr2 (1-149)||(26601247-26601395)
chr2 (1-117)||(35317077-35317193)
chr2 (1-117)||(44765790-44765906)
chr2 (1-117)||(1789457-1789573)
chr2 (1-117)||(5093126-5093242)
chr2 (1-171)||(32125265-32125448)
chr2 (59-115)||(21370631-21370687)
chr2 (6-117)||(9120146-9120257)
chr2 (63-128)||(8172213-8172278)
chr2 (76-116)||(43078653-43078693)
chr2 (7-43)||(11534881-11534917)
chr2 (11-51)||(13833609-13833649)
chr2 (7-43)||(34028935-34028971)
chr2 (1-40)||(20605167-20605206)
chr2 (109-156)||(43078696-43078743)
chr2 (121-171)||(215253-215302)
chr2 (11-43)||(7026545-7026577)
chr2 (7-43)||(20157759-20157795)
chr2 (7-43)||(24193595-24193631)
[»] chr7 (68 HSPs)
chr7 (1-171)||(44121922-44122092)
chr7 (1-171)||(509664-509834)
chr7 (1-171)||(40460729-40460899)
chr7 (1-171)||(23101306-23101486)
chr7 (1-171)||(28342355-28342535)
chr7 (1-171)||(29614776-29614956)
chr7 (1-171)||(39784107-39784287)
chr7 (1-171)||(33892272-33892442)
chr7 (1-164)||(37327935-37328098)
chr7 (1-171)||(46405453-46405623)
chr7 (1-171)||(3022934-3023114)
chr7 (1-171)||(8675341-8675521)
chr7 (1-171)||(33382645-33382825)
chr7 (1-164)||(19251547-19251710)
chr7 (1-171)||(9882249-9882428)
chr7 (1-171)||(28034817-28034997)
chr7 (1-169)||(29585523-29585690)
chr7 (1-165)||(39028105-39028269)
chr7 (1-171)||(18838397-18838577)
chr7 (1-164)||(3797085-3797249)
chr7 (5-164)||(7993154-7993323)
chr7 (1-117)||(32883790-32883906)
chr7 (1-171)||(12740381-12740560)
chr7 (1-171)||(17001055-17001215)
chr7 (1-171)||(9179888-9180058)
chr7 (1-115)||(44256844-44256958)
chr7 (1-118)||(47066711-47066829)
chr7 (1-117)||(12963709-12963825)
chr7 (1-171)||(973199-973379)
chr7 (5-109)||(10068478-10068583)
chr7 (1-171)||(43581102-43581282)
chr7 (1-171)||(7719272-7719452)
chr7 (6-115)||(10676498-10676607)
chr7 (1-171)||(12893423-12893603)
chr7 (1-130)||(40996712-40996841)
chr7 (1-171)||(47914281-47914461)
chr7 (6-171)||(7718374-7718549)
chr7 (1-117)||(20275339-20275455)
chr7 (1-117)||(30440811-30440927)
chr7 (67-164)||(727594-727691)
chr7 (1-171)||(18914747-18914927)
chr7 (1-171)||(34695288-34695468)
chr7 (68-171)||(19810874-19810977)
chr7 (1-140)||(44623329-44623468)
chr7 (1-117)||(34009027-34009144)
chr7 (1-171)||(44343408-44343588)
chr7 (1-171)||(47879183-47879363)
chr7 (1-117)||(31638890-31639006)
chr7 (1-171)||(41827322-41827492)
chr7 (64-117)||(43679492-43679545)
chr7 (62-110)||(25805761-25805809)
chr7 (65-117)||(43187433-43187485)
chr7 (62-117)||(447852-447907)
chr7 (1-89)||(29893089-29893177)
chr7 (64-117)||(32142993-32143046)
chr7 (64-128)||(7113530-7113594)
chr7 (79-171)||(37972879-37972981)
chr7 (1-117)||(1470309-1470424)
chr7 (11-171)||(39219389-39219558)
chr7 (7-43)||(40097140-40097176)
chr7 (1-48)||(10616956-10617003)
chr7 (1-40)||(48117746-48117785)
chr7 (9-43)||(28034997-28035031)
chr7 (121-171)||(47066822-47066872)
chr7 (11-43)||(3022902-3022934)
chr7 (7-43)||(39301247-39301283)
chr7 (11-43)||(41827290-41827322)
chr7 (84-120)||(46122011-46122047)
[»] chr5 (28 HSPs)
chr5 (1-171)||(4240474-4240644)
chr5 (1-171)||(40013724-40013894)
chr5 (1-171)||(5949123-5949292)
chr5 (1-171)||(1461160-1461330)
chr5 (1-171)||(1152115-1152295)
chr5 (1-171)||(14000117-14000297)
chr5 (1-169)||(13925945-13926123)
chr5 (1-164)||(7947592-7947765)
chr5 (1-171)||(4550269-4550449)
chr5 (14-171)||(39852372-39852539)
chr5 (1-164)||(22746311-22746476)
chr5 (1-118)||(37013928-37014045)
chr5 (1-171)||(21147081-21147261)
chr5 (1-107)||(139287-139393)
chr5 (1-171)||(5272931-5273111)
chr5 (1-171)||(33656053-33656233)
chr5 (1-117)||(14465303-14465419)
chr5 (12-128)||(849172-849288)
chr5 (6-171)||(7016751-7016926)
chr5 (1-169)||(9220731-9220899)
chr5 (1-117)||(32157973-32158090)
chr5 (1-117)||(6460806-6460922)
chr5 (1-117)||(27459026-27459141)
chr5 (24-117)||(9689695-9689787)
chr5 (84-126)||(1511409-1511451)
chr5 (121-171)||(37014038-37014088)
chr5 (10-43)||(26806578-26806611)
chr5 (7-43)||(17518474-17518510)
[»] chr3 (67 HSPs)
chr3 (1-171)||(37454874-37455044)
chr3 (1-171)||(10728664-10728834)
chr3 (1-151)||(10660548-10660698)
chr3 (1-171)||(39038053-39038223)
chr3 (1-171)||(11431539-11431719)
chr3 (1-171)||(36674143-36674323)
chr3 (1-171)||(50762073-50762243)
chr3 (1-171)||(34484043-34484223)
chr3 (1-171)||(44906526-44906706)
chr3 (1-171)||(32580190-32580369)
chr3 (1-163)||(23753427-23753579)
chr3 (1-171)||(26107274-26107454)
chr3 (1-171)||(40897157-40897337)
chr3 (1-171)||(17946301-17946481)
chr3 (1-117)||(52618042-52618158)
chr3 (8-171)||(18749632-18749805)
chr3 (1-164)||(48379170-48379343)
chr3 (1-171)||(52810391-52810571)
chr3 (1-164)||(31646304-31646477)
chr3 (1-171)||(44276402-44276568)
chr3 (11-156)||(51737754-51737909)
chr3 (1-164)||(20833005-20833178)
chr3 (1-171)||(50903253-50903436)
chr3 (1-171)||(54628856-54629037)
chr3 (12-117)||(539481-539586)
chr3 (12-164)||(6975772-6975922)
chr3 (1-171)||(19253840-19254020)
chr3 (1-171)||(20498222-20498402)
chr3 (59-171)||(39842507-39842619)
chr3 (1-117)||(6035130-6035246)
chr3 (12-171)||(3206218-3206387)
chr3 (4-171)||(10139159-10139336)
chr3 (11-169)||(27899367-27899525)
chr3 (1-171)||(6589577-6589757)
chr3 (4-171)||(996099-996276)
chr3 (1-171)||(33807811-33807992)
chr3 (1-117)||(3999722-3999838)
chr3 (1-117)||(35337748-35337864)
chr3 (1-162)||(15492889-15493053)
chr3 (1-117)||(29030019-29030134)
chr3 (1-171)||(33996554-33996734)
chr3 (1-171)||(40246857-40247037)
chr3 (1-117)||(37820554-37820670)
chr3 (1-128)||(52114541-52114669)
chr3 (1-171)||(29448871-29449051)
chr3 (1-171)||(44762050-44762230)
chr3 (1-130)||(53929192-53929321)
chr3 (1-171)||(54625605-54625785)
chr3 (65-128)||(5825139-5825202)
chr3 (1-117)||(25418379-25418495)
chr3 (1-88)||(12103642-12103729)
chr3 (1-117)||(55235198-55235313)
chr3 (11-117)||(1440029-1440135)
chr3 (59-139)||(23535866-23535946)
chr3 (64-140)||(52080003-52080079)
chr3 (1-117)||(51699557-51699672)
chr3 (1-48)||(18749583-18749630)
chr3 (121-171)||(45862984-45863034)
chr3 (64-117)||(22057838-22057891)
chr3 (7-43)||(27593198-27593234)
chr3 (7-43)||(36786017-36786053)
chr3 (109-171)||(6131246-6131308)
chr3 (83-128)||(1439960-1440005)
chr3 (10-43)||(10216163-10216196)
chr3 (10-43)||(10225671-10225704)
chr3 (7-43)||(39338299-39338335)
chr3 (11-51)||(51737912-51737952)
[»] chr4 (68 HSPs)
chr4 (1-171)||(23987227-23987397)
chr4 (1-167)||(30967326-30967492)
chr4 (1-171)||(5441417-5441597)
chr4 (1-171)||(27768069-27768249)
chr4 (1-171)||(54341157-54341337)
chr4 (1-156)||(49501549-49501704)
chr4 (1-156)||(49507614-49507769)
chr4 (1-171)||(12913237-12913407)
chr4 (1-171)||(50018264-50018434)
chr4 (1-171)||(37828415-37828595)
chr4 (12-164)||(28483923-28484074)
chr4 (1-171)||(32684021-32684180)
chr4 (1-171)||(51320934-51321114)
chr4 (4-164)||(37915843-37916013)
chr4 (59-164)||(5800049-5800154)
chr4 (1-171)||(36479255-36479424)
chr4 (1-171)||(32322104-32322284)
chr4 (1-117)||(29649744-29649860)
chr4 (4-171)||(54853481-54853658)
chr4 (1-118)||(49834889-49835006)
chr4 (59-171)||(31314755-31314867)
chr4 (1-171)||(41725138-41725315)
chr4 (1-171)||(46635661-46635835)
chr4 (1-171)||(55302856-55303036)
chr4 (1-109)||(9163089-9163197)
chr4 (59-171)||(48261198-48261320)
chr4 (65-156)||(56445383-56445474)
chr4 (12-171)||(42786708-42786877)
chr4 (1-171)||(25331144-25331324)
chr4 (1-117)||(44770930-44771047)
chr4 (1-117)||(19740985-19741101)
chr4 (1-117)||(32950913-32951029)
chr4 (2-117)||(7007388-7007503)
chr4 (1-171)||(41881095-41881276)
chr4 (1-171)||(1112906-1113086)
chr4 (1-171)||(12112958-12113138)
chr4 (1-117)||(25446063-25446179)
chr4 (1-117)||(28370937-28371053)
chr4 (1-117)||(28541711-28541827)
chr4 (1-164)||(22202028-22202201)
chr4 (5-110)||(39307337-39307442)
chr4 (63-171)||(40537173-40537281)
chr4 (1-163)||(39479376-39479550)
chr4 (12-164)||(1044831-1044993)
chr4 (1-164)||(3436606-3436779)
chr4 (1-117)||(53275852-53275968)
chr4 (59-117)||(7249842-7249900)
chr4 (1-108)||(23464968-23465075)
chr4 (59-117)||(41320881-41320939)
chr4 (4-117)||(25504716-25504829)
chr4 (1-130)||(34228647-34228776)
chr4 (1-117)||(37046528-37046645)
chr4 (4-171)||(30009690-30009867)
chr4 (1-48)||(20021357-20021404)
chr4 (109-171)||(24736466-24736528)
chr4 (102-171)||(11090428-11090497)
chr4 (64-117)||(27454155-27454208)
chr4 (7-43)||(40143822-40143858)
chr4 (7-43)||(54509760-54509796)
chr4 (1-40)||(24131126-24131165)
chr4 (109-171)||(8711997-8712059)
chr4 (10-43)||(28100584-28100617)
chr4 (10-43)||(50018189-50018222)
chr4 (11-47)||(11090372-11090408)
chr4 (7-43)||(26336123-26336159)
chr4 (11-43)||(37915766-37915798)
chr4 (4-40)||(41320794-41320830)
chr4 (7-43)||(47685190-47685226)
[»] chr1 (51 HSPs)
chr1 (1-171)||(5495119-5495289)
chr1 (1-171)||(6312581-6312761)
chr1 (1-171)||(29396401-29396581)
chr1 (1-171)||(51701587-51701767)
chr1 (1-171)||(38536112-38536282)
chr1 (1-171)||(38558330-38558500)
chr1 (2-171)||(29219294-29219463)
chr1 (1-171)||(18798498-18798658)
chr1 (1-171)||(45272594-45272762)
chr1 (1-171)||(25612164-25612344)
chr1 (1-171)||(9322513-9322693)
chr1 (1-171)||(15835066-15835246)
chr1 (1-171)||(28387406-28387586)
chr1 (1-171)||(48177475-48177655)
chr1 (1-156)||(46328049-46328214)
chr1 (1-171)||(48668798-48668965)
chr1 (1-116)||(49230893-49231008)
chr1 (1-117)||(9577509-9577625)
chr1 (1-171)||(21222154-21222334)
chr1 (1-171)||(28824386-28824565)
chr1 (1-171)||(35279679-35279859)
chr1 (1-171)||(50192563-50192744)
chr1 (1-171)||(19451821-19452001)
chr1 (18-171)||(32588966-32589129)
chr1 (11-140)||(47784404-47784532)
chr1 (59-171)||(33025578-33025690)
chr1 (1-117)||(35679205-35679321)
chr1 (1-169)||(6304267-6304446)
chr1 (6-171)||(45760022-45760197)
chr1 (1-164)||(45535951-45536124)
chr1 (1-117)||(730155-730272)
chr1 (62-126)||(31622527-31622591)
chr1 (64-169)||(49198284-49198399)
chr1 (1-117)||(29556111-29556227)
chr1 (2-171)||(47780719-47780898)
chr1 (1-79)||(8141243-8141321)
chr1 (1-117)||(47654428-47654545)
chr1 (62-117)||(31572274-31572329)
chr1 (1-117)||(37014717-37014833)
chr1 (1-117)||(49418091-49418207)
chr1 (67-140)||(955823-955896)
chr1 (1-155)||(48524326-48524490)
chr1 (59-117)||(51085860-51085918)
chr1 (6-43)||(10896845-10896882)
chr1 (7-43)||(1928406-1928442)
chr1 (7-43)||(36402293-36402329)
chr1 (1-81)||(22183377-22183457)
chr1 (7-43)||(29208801-29208837)
chr1 (7-43)||(33243312-33243348)
chr1 (7-43)||(33263485-33263521)
chr1 (10-42)||(42657763-42657795)
[»] chr6 (19 HSPs)
chr6 (1-171)||(30385081-30385249)
chr6 (1-171)||(31895709-31895889)
chr6 (1-171)||(34773422-34773602)
chr6 (1-164)||(14262452-14262625)
chr6 (62-171)||(31067567-31067676)
chr6 (1-171)||(34759062-34759243)
chr6 (11-171)||(7497099-7497268)
chr6 (79-171)||(4200449-4200541)
chr6 (1-171)||(6197490-6197670)
chr6 (1-130)||(7051858-7051987)
chr6 (1-171)||(2300750-2300930)
chr6 (1-171)||(1391637-1391817)
chr6 (1-169)||(28002678-28002856)
chr6 (1-117)||(29076611-29076728)
chr6 (1-119)||(3848225-3848341)
chr6 (67-117)||(29111652-29111702)
chr6 (5-88)||(656982-657065)
chr6 (7-43)||(10644016-10644052)
chr6 (7-43)||(30877898-30877934)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-171)||(13896-14066)
[»] scaffold0152 (2 HSPs)
scaffold0152 (1-171)||(21261-21431)
scaffold0152 (99-171)||(28463-28536)
[»] scaffold0543 (1 HSPs)
scaffold0543 (1-171)||(10574-10754)
[»] scaffold0922 (2 HSPs)
scaffold0922 (1-117)||(4214-4330)
scaffold0922 (6-43)||(4135-4172)
[»] scaffold1504 (1 HSPs)
scaffold1504 (1-171)||(877-1057)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-164)||(39637-39810)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-171)||(100225-100405)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-169)||(15048-15226)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-169)||(15691-15869)
[»] scaffold0054 (2 HSPs)
scaffold0054 (12-164)||(36927-37089)
scaffold0054 (1-32)||(37027-37058)
[»] scaffold0347 (1 HSPs)
scaffold0347 (95-171)||(14878-14954)
[»] scaffold0151 (1 HSPs)
scaffold0151 (12-171)||(38618-38786)
[»] scaffold0042 (1 HSPs)
scaffold0042 (9-171)||(58089-58262)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-171)||(102107-102289)
[»] scaffold0113 (1 HSPs)
scaffold0113 (4-171)||(38908-39085)
[»] scaffold0276 (1 HSPs)
scaffold0276 (1-108)||(625-732)
[»] scaffold0839 (1 HSPs)
scaffold0839 (109-156)||(3720-3767)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-45)||(222583-222627)
scaffold0010 (1-45)||(233751-233795)
scaffold0010 (1-45)||(234599-234643)
[»] scaffold0007 (1 HSPs)
scaffold0007 (67-117)||(199905-199955)


Alignment Details
Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 18306153 - 18305983
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||    
T  18306153 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtt 18306054  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  18306053 taataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 18305983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 32497539 - 32497709
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||| |||||||    
T  32497539 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtt 32497638  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| ||||||| ||||||    
T  32497639 taataaattggattttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgaga 32497709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 7466349 - 7466519
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||       |||||||||||||||||||||||||||||| |||| ||||||    
T  7466349 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaagaattgtt 7466448  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  7466449 taataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 7466519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 16362210 - 16362380
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||       |||| |||||||||||||||||||||||||||||||||||||    
T  16362210 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtt 16362309  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   |||||||||||||||||||||||| ||||| |||||||| |||| ||||||    
T  16362310 taataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgaga 16362380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 42305977 - 42305807
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| ||||||||||||||||||||||    
T  42305977 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaataattcaaatttcgaaggattgtt 42305878  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||| |||||||||||    |||||||||||||||||||||||| |||||||| || ||||||||||||||    
T  42305877 taatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtcattcatgaaaaaatgaga 42305807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 19718073 - 19717893
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||||||    
T  19718073 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagaattgtt 19717974  T
Q  101 taataaattgga----------ttttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||          ||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  19717973 taataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgaga 19717893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 14782327 - 14782147
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||    
T  14782327 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtt 14782228  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  14782227 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 14782147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 44726002 - 44725822
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||    
T  44726002 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtt 44725903  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  44725902 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 44725822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 4 - 164
Target Start/End: Complemental strand, 18958916 - 18958746
Alignment:
Q  4 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  18958916 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 18958817  T
Q  104 taaattgga----------ttttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    |||||||||          ||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  18958816 taaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 18958746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 39467660 - 39467480
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  39467660 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 39467561  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          |||||||| || |||||||||||||||||||||||| ||||| ||||| ||||||| ||||||    
T  39467560 taataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 39467480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 9288649 - 9288469
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  9288649 ttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 9288550  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  9288549 taataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 9288469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 10295563 - 10295392
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg 110  Q
    |||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10295563 aaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg 10295464  T
Q  111 gat-----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||           |||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  10295463 gattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 10295392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 31623709 - 31623826
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  31623709 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 31623808  T
Q  101 taataaattggattttgt 118  Q
    ||||||||||||||||||    
T  31623809 taataaattggattttgt 31623826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 4031450 - 4031297
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||       ||||||||||||||||||||||||||||||||||||||||||    
T  4031450 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 4031351  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    ||||||||||||||          |||||||||||||||||||| ||||||||||| |||||||    
T  4031350 taataaattggatt----------ttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 4031297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 26856080 - 26856246
Alignment:
Q  1 ttgtcattttaaaaaagtctt-gaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||| |||||    
T  26856080 ttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagtattgt 26856179  T
Q  100 ttaataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttt 156  Q
    |||||||||          ||||||||||| |||||||||||||||||||||||| |||||||||||    
T  26856180 ttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 26856246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 37857144 - 37857303
Alignment:
Q  12 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 111  Q
    ||||||| |||||||||||||| |||| ||||||||| ||       ||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  37857144 aaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgg 37857243  T
Q  112 attttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||   |||||||||||||||||| ||||| ||||| ||||| ||||||| ||||||    
T  37857244 attttgatggattttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgaga 37857303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 171
Target Start/End: Complemental strand, 43166877 - 43166702
Alignment:
Q  6 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 105  Q
    |||| |||||||||||| ||||||||||||||||| ||  ||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  43166877 atttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 43166778  T
Q  106 aattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          |||||| |||||||| ||||||||||||||| ||||||| ||| ||||||| ||||||    
T  43166777 aattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgaga 43166702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 171
Target Start/End: Original strand, 4403124 - 4403301
Alignment:
Q  4 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 103  Q
    ||||||||||||| |||||| ||||||||| |||| ||||||||| ||        ||| ||||||||||||||||||||||||||||||||||||||||    
T  4403124 tcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattcaaaatcattcaaatttcgaaggattgtttaa 4403223  T
Q  104 taaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||          ||||||||||| |||||| ||||||||||||||||| ||||||||||| ||||||| ||||||    
T  4403224 taaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaaaatatgaga 4403301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 41479111 - 41479281
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       ||||  |||||||||||||||||||||||||||| |||||||    
T  41479111 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaatgattgtt 41479210  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||  ||||||||| |||||| ||||  ||||||| ||  ||||| ||||| ||||||| ||||||    
T  41479211 taataaatcagattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgaga 41479281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 26374622 - 26374442
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  26374622 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 26374523  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  26374522 taataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 26374442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 24502002 - 24501825
Alignment:
Q  4 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 103  Q
    |||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||||    
T  24502002 tcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaa 24501903  T
Q  104 taaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  24501902 taaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 24501825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 42938309 - 42938129
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  42938309 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 42938210  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| |   ||||||||||| ||||||| ||||||    
T  42938209 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgaga 42938129  T

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Target: chr8; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 32711474 - 32711356
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||||||||||||||    
T  32711474 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaaggattgtt 32711375  T
Q  101 taataaattggattttgtg 119  Q
    ||||||||  |||||||||    
T  32711374 taataaatcagattttgtg 32711356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 42937367 - 42937545
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| |||||||||||  |||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  42937367 ttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 42937464  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| || |||||||||||| ||||||| ||||||    
T  42937465 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacatgaga 42937545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 2705011 - 2704831
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||| |||||||    
T  2705011 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtt 2704912  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| |||||  |||||| ||  ||||||||||| ||||||| ||||||    
T  2704911 taataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgaga 2704831  T

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Target: chr8; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 10392429 - 10392249
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||| ||||| | |||||||||||||||||| |||| ||       |||| |||||||||| ||||||||||||||||||||||||||    
T  10392429 ttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattcaaatttcgaaggattgtt 10392330  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||| ||||| ||||||| ||||||    
T  10392329 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgaga 10392249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 43959672 - 43959841
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||| | ||||||||||||| | || |||| ||       | || ||||||||||||||||||||||||||||| |||||||    
T  43959672 ttgtcattttaaaaaagtcttgtg-tattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatttcgaatgattgtt 43959770  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||  |||||||   |||||||| ||| ||||||| ||  ||||||||||| || |||| ||||||    
T  43959771 taataaatcagattttgatggattttgtggtgaaattttagcatgaaaaagtctttaattaaaacatgaga 43959841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 5576813 - 5576632
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||        |||  |||||||||||||||||||||||||||||| |||||    
T  5576813 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaagaattgt 5576714  T
Q  100 ttaataaa----------ttggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||           ||||||||||| |||||| ||||| ||||||| ||  ||||||||||||||||||| ||||||    
T  5576713 ttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgaga 5576632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7507091 - 7506911
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| | |||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||| ||||||||||| |||||||||||    
T  7507091 ttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaaattttgaaggattgtt 7506992  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||| ||| ||||||    
T  7506991 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgaga 7506911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 42735466 - 42735353
Alignment:
Q  4 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 103  Q
    |||||| ||||||| |||| |||||||||| |||||| || |||| ||       |||| |||||||||||||||||||||||||||||| |||||||||    
T  42735466 tcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagtattgtttaa 42735367  T
Q  104 taaattggattttg 117  Q
    |||||  |||||||    
T  42735366 taaatcagattttg 42735353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 23115360 - 23115245
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||||| |||||| ||||||||||||||||| || |||| ||       |||| |||||||||||| |||||||||||| |||||||||||    
T  23115360 ttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa-tcattcaaatttggaaggattgtt 23115262  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  23115261 taataaatcagattttg 23115245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 13478384 - 13478313
Alignment:
Q  59 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgtag 130  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||||||| ||||| ||  ||||||||||    
T  13478384 gtcttgtagtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtag 13478313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 39189940 - 39189892
Alignment:
Q  67 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 115  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaattgaattt 39189892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 41070018 - 41070091
Alignment:
Q  60 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgtagtgt 133  Q
    |||||||||||| |||||||||| |||||| || |||||||| |||||||| ||||| || |||||| ||||||    
T  41070018 tcttgtggtatttaaaatcattccaatttcaaatgattgtttgataaattgaattttctgggattttctagtgt 41070091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 8410526 - 8410474
Alignment:
Q  65 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||| ||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttg 8410474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 4950150 - 4950092
Alignment:
Q  59 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    |||||| ||||||||||||||||||| |||| || |||| ||||||||||| |||||||    
T  4950150 gtcttggggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttg 4950092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 9770545 - 9770497
Alignment:
Q  68 tattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 116  Q
    |||||||||| ||||||||||| ||| ||| ||||||||||||||||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggatttt 9770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 31623819 - 31623862
Alignment:
Q  121 gattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    |||||||||||||||||||||||| ||||||| ||| |||||||    
T  31623819 gattttgtagtgtaattttaacaagaaaaagtttttcatgaaaa 31623862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 4302846 - 4302813
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagact 40  Q
    ||||||||||||||| ||||||||||||||||||    
T  4302846 ttttaaaaaagtctttaggtattcaatcaagact 4302813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 18958956 - 18958911
Alignment:
Q  6 attttaaaaaagtcttgaggtattcaatcaagacttttcatcattt 51  Q
    |||| |||||||||||| ||||||||||||||||| || |||||||    
T  18958956 atttaaaaaaagtcttgtggtattcaatcaagactctttatcattt 18958911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 32497465 - 32497497
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagactttt 43  Q
    |||||||||||| ||||||||||||||||||||    
T  32497465 aaaaaagtcttgtggtattcaatcaagactttt 32497497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 37567401 - 37567365
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  37567401 ttttaaaaaagtctttaggtattcaattaagactttt 37567365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 7e-61; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 7026619 - 7026774
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  7026619 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 7026718  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttt 156  Q
    |||||||||||||||||   |||||||||||||||||||||||| |||||||||||    
T  7026719 taataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtcttt 7026774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 28740478 - 28740308
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  28740478 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 28740379  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   |||||||| ||||||||||||||| ||||||||||| || |||| ||||||    
T  28740378 taataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcataaaaagatgaga 28740308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 3463687 - 3463857
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||       ||||||||||||| |||||||||||| |||| ||||||||||    
T  3463687 ttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatttaaaatcattcaattttcaaaggattgtt 3463786  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  3463787 taataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaatatgaga 3463857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 13833614 - 13833447
Alignment:
Q  4 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 103  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||       ||||| |||||||||||||||||||||||| ||||||||||||||    
T  13833614 tcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaaggattgtttaa 13833515  T
Q  104 taaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| || ||||||    
T  13833514 taaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgaga 13833447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 18177282 - 18177462
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||||||||    
T  18177282 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatttcgaaggattgtt 18177381  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||| |||          ||||||||||| |||||||||||||||||||||||| ||||||||||| || |||| ||||||    
T  18177382 taattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgaga 18177462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 33135638 - 33135817
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  33135638 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtt 33135737  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||||||| || |||||||||||    
T  33135738 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaatgaga 33135817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 28844570 - 28844750
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  28844570 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 28844669  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          |||||||||||  |||||||||||||||||||| || ||||||||||| || |||| ||||||    
T  28844670 taataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgaga 28844750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 10657421 - 10657599
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||| |||||||    
T  10657421 ttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtt 10657520  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatga 169  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||| ||| ||||||| ||||    
T  10657521 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatga 10657599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 3574862 - 3574979
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||| |||||||||||||||||||||||||||||||||    
T  3574862 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtt 3574961  T
Q  101 taataaattggattttgt 118  Q
    ||||||||||||||||||    
T  3574962 taataaattggattttgt 3574979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 25288174 - 25288354
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||        |||||||||||||||||||||||||||||||||||||||||    
T  25288174 ttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtt 25288273  T
Q  101 taataaattgg----------attttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||          |||||||| |||||||||||||||||||||||| | || |||||| ||||||| ||||||    
T  25288274 taataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatgaga 25288354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 26788799 - 26788966
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn--gtcttgtggtattcaaaatcattcaaatttcgaaggattg 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||| |||||||||    
T  26788799 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattg 26788898  T
Q  99 tttaataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttt 156  Q
    ||||||||||          ||||||||||| |||||||||||||||||||||||| |||||||||||    
T  26788899 tttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 26788966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 6224743 - 6224582
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||       ||||||||||||||||||| ||||||||||||||||||| |    
T  6224743 ttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaattattcaaatttcgaaggattat 6224644  T
Q  100 ttaataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||          |||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  6224643 ttaataaattggatt----------ttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 6224582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 378962 - 379122
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg 110  Q
    |||||||||||| ||||||||||||| ||||||  ||||||       || |  |||||||||||||||||||||||| |||||||||||||||||||||    
T  378962 aaaaaagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattcaaaatcattcaaattttgaaggattgtttaataaattg 379061  T
Q  111 gattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||  ||||||||||||||||||||||||| ||||| || || ||||||| ||||||    
T  379062 gattttgatagattttgtagtgtaattttaacaagaaaaaatcgttcatgaaaagatgaga 379122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 10125487 - 10125330
Alignment:
Q  1 ttgtcattttaaaaaagtctt--gaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattg 98  Q
    |||||||||||||||||||||  ||| ||||||||||| ||||||||||| ||       ||||  || |||||||||||||||||||||| ||||||||    
T  10125487 ttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattcaaaatcattcaaatttcaaaggattg 10125388  T
Q  99 tttaataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttt 156  Q
    |||||||||||| |||||||| |||||| ||||| ||||||||||| |||||||||||    
T  10125387 tttaataaattgaattttgtgggattttttagtgaaattttaacaagaaaaagtcttt 10125330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 16269706 - 16269886
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  16269706 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 16269805  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  16269806 taataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 16269886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 24776370 - 24776550
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  24776370 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 24776469  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  24776470 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 24776550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 20605251 - 20605431
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||||||||||||||    
T  20605251 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaaggattgtt 20605350  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  20605351 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 20605431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 31170819 - 31170639
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| ||||||||||    
T  31170819 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtt 31170720  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  31170719 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 31170639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 305660 - 305480
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| ||| |||||||    
T  305660 ttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaatgattgtt 305561  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          |||||||||||||||||| ||||| |||||||  |  ||||||||||| ||||||| ||||||    
T  305560 taataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgaga 305480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 12407395 - 12407575
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||| ||||| || |||| ||       |||| ||||||||||||||||||||||||| |||||||||||    
T  12407395 ttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgtt 12407494  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  12407495 taataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgaga 12407575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 14198772 - 14198592
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||  |||||||||||||||||||||||||||||||||||||    
T  14198772 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaatttcgaaggattgtt 14198673  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||| ||||| ||||||| ||||||    
T  14198672 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgaga 14198592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 43847661 - 43847768
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| || ||||||||||||||||||||||||||||||||||    
T  43847661 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaatttcgaaggattgtt 43847760  T
Q  101 taataaat 108  Q
    ||||||||    
T  43847761 taataaat 43847768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 22551958 - 22551778
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||| ||       |||| |||||||||||||| |||||||||||||| |||||||    
T  22551958 ttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaatgattgtt 22551859  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    || |||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||| ||| ||||||| ||||||    
T  22551858 tattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgaga 22551778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 215420 - 215320
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||| ||       |||| |||||||||||||||||||||| ||| ||||||||||    
T  215420 ttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaacttcaaaggattgtt 215321  T
Q  101 t 101  Q
    |    
T  215320 t 215320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 26601395 - 26601247
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||  ||||||||||||  |||||||||||||||| || |||| ||       |||  ||||||||||||||||||||||||||||| | |||||    
T  26601395 ttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaatttcgaatgtttgtt 26601296  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaa 149  Q
    ||||||||  ||||||||| |||||| ||||| || ||||||| |||||    
T  26601295 taataaatcagattttgtgggattttctagtgaaactttaacattaaaa 26601247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 35317077 - 35317193
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||||||||||||   ||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  35317077 ttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 35317176  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  35317177 taataaatcagattttg 35317193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 44765790 - 44765906
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||| ||||| || |||| ||       |||| ||||||||||||||||||||||||||||| |||||||    
T  44765790 ttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtt 44765889  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  44765890 taataaataagattttg 44765906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1789457 - 1789573
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||  | ||||||||||| ||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  1789457 ttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 1789556  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  1789557 taataaatcagattttg 1789573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 5093242 - 5093126
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||  || |||| ||       |||| || |||||||||||||||||||||| |||||||||||    
T  5093242 ttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattttgaaggattgtt 5093143  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  5093142 taataaatcagattttg 5093126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 32125265 - 32125448
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcat---catttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggatt 97  Q
    ||||||||| ||||||||| || ||||||||||||||||| || ||   |||||       |||  ||||||||||||||||||||||||||||||||||    
T  32125265 ttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaaggatt 32125364  T
Q  98 gtttaataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||          ||||||||||| |||||| ||||  ||||||| ||  ||||||||||| ||||||| ||||||    
T  32125365 gtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgaga 32125448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 21370687 - 21370631
Alignment:
Q  59 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 115  Q
    |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 9120146 - 9120257
Alignment:
Q  6 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 105  Q
    ||||||||||||||||| | ||||||||||||| | || |||| ||        ||| ||| |||||||||||||||| ||||  |||||||||||||||    
T  9120146 attttaaaaaagtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagattttaaaggattgtttaata 9120245  T
Q  106 aattggattttg 117  Q
    |||| |||||||    
T  9120246 aattagattttg 9120257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 8172213 - 8172278
Alignment:
Q  63 tgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgt 128  Q
    |||||||||| ||| |||||  |||| ||||||||  |||||||||||||||||||||||||||||    
T  8172213 tgtggtattcgaaaacattctgattttgaaggatttcttaataaattggattttgtgagattttgt 8172278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 43078653 - 43078693
Alignment:
Q  76 atcattcaaatttcgaaggattgtttaataaattggatttt 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggatttt 43078693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 11534881 - 11534917
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11534881 ttttaaaaaagtctttaggtattcaatcaagactttt 11534917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 13833649 - 13833609
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagacttttcatcattt 51  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  13833649 aaaaaagtcttgtggtattcaatcaagactttttatcattt 13833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 34028971 - 34028935
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34028971 ttttaaaaaagtctttaggtattcaatcaagactttt 34028935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 20605167 - 20605206
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagact 40  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  20605167 ttgtcatttaaaaaaagtcttgtggtattcaatcaagact 20605206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 43078696 - 43078743
Alignment:
Q  109 tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttt 156  Q
    ||||||||||| |||||| ||||||||||||||||  |||||||||||    
T  43078696 tggattttgtgggattttatagtgtaattttaacatgaaaaagtcttt 43078743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 215302 - 215253
Alignment:
Q  121 gattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||||||| | ||||||||||| ||||||| ||||||    
T  215302 gattttgtagtgtaattttaac-agaaaaagtctttcatgaaaagatgaga 215253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 7026545 - 7026577
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagactttt 43  Q
    |||||||||||| ||||||||||||||||||||    
T  7026545 aaaaaagtcttgtggtattcaatcaagactttt 7026577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 20157795 - 20157759
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  20157795 ttttaaagaagtctttaggtattcaatcaagactttt 20157759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 24193595 - 24193631
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  24193595 ttttaaaaaagtcttggggtattcaatcaagattttt 24193631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 44122092 - 44121922
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||||||||    
T  44122092 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtt 44121993  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  44121992 taataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttaatgaaaagatgaga 44121922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 509664 - 509834
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||    
T  509664 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaacgattgtt 509763  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   ||||||||||||  |||||||||| ||||||||||| ||||||| ||||||    
T  509764 taataaattggattttgatggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgaga 509834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 40460899 - 40460729
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||| |||||||    
T  40460899 ttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtt 40460800  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   |||||||||||||||||||||||| ||||| ||||| ||||||| ||||||    
T  40460799 taataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgaga 40460729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23101306 - 23101486
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  23101306 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 23101405  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  23101406 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 23101486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 28342355 - 28342535
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  28342355 ttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 28342454  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  28342455 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 28342535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 29614956 - 29614776
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||    
T  29614956 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtt 29614857  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  29614856 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 29614776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 39784107 - 39784287
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||    
T  39784107 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtt 39784206  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  39784207 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 39784287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 33892442 - 33892272
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||| |||||||    
T  33892442 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtt 33892343  T
Q  101 taataaattgga-ttttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
     ||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||| || |||| ||||||    
T  33892342 aaataaattggatttttatga-attttgtagtgtaattttaacaagaaaaagtctttcattaaaagatgaga 33892272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 37327935 - 37328098
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||       ||||||||||||||||||||||||||||||| ||||||||||    
T  37327935 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtt 37328034  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    |||||||||| ||||||   ||||||||||| |||||||||||| ||||||||||| |||||||    
T  37328035 taataaattgaattttgatggattttgtagtataattttaacaaaaaaaagtctttcatgaaaa 37328098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 46405623 - 46405453
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||| || |||||||    
T  46405623 ttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaatgattgtt 46405524  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   |||||||| ||||||||||||||| ||||||| ||| || |||| ||||||    
T  46405523 taataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtatttaataaaaagatgaga 46405453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 3022934 - 3023114
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  3022934 ttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 3023033  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||| ||| ||||||| ||||||    
T  3023034 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgaga 3023114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 8675341 - 8675521
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||| ||| ||||||||||||||    
T  8675341 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaacttcgaaggattgtt 8675440  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  8675441 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgaga 8675521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 33382645 - 33382825
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||  ||||||||||||||||| ||||||||||||||||||    
T  33382645 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaatttcgaaggattgtt 33382744  T
Q  101 taataaattgga----------ttttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||          ||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  33382745 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgaga 33382825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19251547 - 19251710
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  19251547 ttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtt 19251646  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    |||||||||||||||||   |||||| | ||| ||||||| ||||||||||||||| |||||||    
T  19251647 taataaattggattttgatggattttcttgtgaaattttagcaataaaaagtctttcatgaaaa 19251710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 9882428 - 9882249
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||| |||||||    
T  9882428 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtt 9882329  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| ||||||||||||||||||||| || ||||||||||| || |||||||||||    
T  9882328 taataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaatgaga 9882249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 28034997 - 28034817
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||       ||||||||||||||||||| ||||||||||| ||||||||||    
T  28034997 ttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtt 28034898  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  28034897 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgaga 28034817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 29585523 - 29585690
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||| ||       ||||| |||||||||||||||||||||||| |||||||||||    
T  29585523 ttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaaggattgtt 29585621  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatga 169  Q
    |||||| ||||||||||   |||||||||||||||||||||||| ||||||||||| || |||| ||||    
T  29585622 taataatttggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatga 29585690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 39028105 - 39028269
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||       |||||||| ||||||||||| |||||||| |||| |||||||    
T  39028105 ttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaattacgaaagattgtt 39028204  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaa 165  Q
    |||||||||||||||||   ||||||||||||||| |||||||| ||||||| ||| ||||||||    
T  39028205 taataaattggattttgatggattttgtagtgtaactttaacaagaaaaagtttttcatgaaaaa 39028269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 18838397 - 18838577
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||  ||       |||||||||||||||||||||||||||||||||| |||||||    
T  18838397 ttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtt 18838496  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||| ||| ||||||| ||||||    
T  18838497 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaga 18838577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 3797249 - 3797085
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||| |||||| |||||| |||||||||||    
T  3797249 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaattttgaaggattgtt 3797150  T
Q  101 taataaattggattttg-tgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    ||||||||| ||||||| || |||||| ||||| ||||||| ||  ||||||||||||| |||||    
T  3797149 taataaattagattttgatgggattttctagtgaaattttagcatgaaaaagtcttttaagaaaa 3797085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 7993154 - 7993323
Alignment:
Q  5 cattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat 104  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||       ||||| ||||||||||||||||||||||||||||||||||||||||    
T  7993154 cattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaat 7993253  T
Q  105 aaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    ||||          |||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  7993254 aaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 7993323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32883790 - 32883906
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||| ||       |||||||||||||||||||||||||||||||||| |||||||    
T  32883790 ttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtt 32883889  T
Q  101 taataaattggattttg 117  Q
    || ||||||||||||||    
T  32883890 tattaaattggattttg 32883906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 12740381 - 12740560
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||||||       |||| |||||||||||||||||||||||||| ||||||||||    
T  12740381 ttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattcaaatttcaaaggattgtt 12740480  T
Q  101 taataaat---------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||         | ||||||||| |||||| ||||||||||||||||| | ||||||||| || |||| ||||||    
T  12740481 taataaatggattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgaga 12740560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 17001215 - 17001055
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||| ||        | | |||||||||||||||||||||||||||||||||||||    
T  17001215 ttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattcaaaatcattcaaatttcgaaggattgtt 17001116  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||          ||||||||||||| |||||| ||||||||||| ||||||| ||||||    
T  17001115 taataaattggatt----------ttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgaga 17001055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 9179888 - 9180058
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||| |||  |||||||||||||||| ||||||| ||       |||||||||||| |||||||| | ||||| ||||||||||||    
T  9179888 ttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcacttaaattccgaaggattgtt 9179987  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||||||| |||||| ||||| | ||||| ||  ||||||||||| ||||||| ||||||    
T  9179988 taataaattggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgaga 9180058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 44256958 - 44256844
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||       || | ||||||||||||||||||||||||||||| |||||||    
T  44256958 ttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaatttcgaatgattgtt 44256859  T
Q  101 taataaattggattt 115  Q
    |||||||||||||||    
T  44256858 taataaattggattt 44256844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 47066711 - 47066829
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    ||||||||||||||||||||||| |||||||||||| |  |||||||| ||        |||||||||||||||||||||||||||||||||||||||||    
T  47066711 ttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgt 47066810  T
Q  100 ttaataaattggattttgt 118  Q
    |||||||||||||||||||    
T  47066811 ttaataaattggattttgt 47066829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12963709 - 12963825
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| | ||       |||| ||||||| |||||||||||||||||||||||||||||    
T  12963709 ttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaatcattcaaatttcgaaggattgtt 12963808  T
Q  101 taataaattggattttg 117  Q
    ||||||||| |||||||    
T  12963809 taataaattagattttg 12963825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 973199 - 973379
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||        | | |||||||||||||||||||||||||||||||||||||    
T  973199 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatcattcaaatttcgaaggattgtt 973298  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||| ||||||||||| ||||||| ||||||    
T  973299 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgaga 973379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 10068478 - 10068583
Alignment:
Q  5 cattttaaaaaagtctt-gaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 103  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| ||       |||||||||||||||||||||||||||||| ||||||||||||||    
T  10068478 cattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaa 10068577  T
Q  104 taaatt 109  Q
    ||||||    
T  10068578 taaatt 10068583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 43581282 - 43581102
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  43581282 ttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 43581183  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  43581182 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 43581102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7719452 - 7719272
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||        ||| ||||||||||||||||||||||||||||| |||||||    
T  7719452 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgtt 7719353  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  7719352 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 7719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 10676607 - 10676498
Alignment:
Q  6 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 105  Q
    |||| ||||| |||||| ||||||||||||||||||||||||| ||       ||||  | |||||||||||||||||||||||||||||||||||||||    
T  10676607 atttaaaaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcgaaggattgtttaata 10676508  T
Q  106 aattggattt 115  Q
    ||||||||||    
T  10676507 aattggattt 10676498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 12893423 - 12893603
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| |||||| |||||||||| || |||| ||       ||||  ||||||||||||||||||||||||||||| ||||||    
T  12893423 ttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaagaattgtt 12893522  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          |||||||||||||||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  12893523 taataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 12893603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 40996841 - 40996712
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||  ||       |||| |||||||||||||||||||||||||||||||||||||    
T  40996841 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 40996742  T
Q  101 taataaattggattttgtgagattttgtag 130  Q
    ||||||||  |||||||   ||||||||||    
T  40996741 taataaatcagattttgatggattttgtag 40996712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 47914281 - 47914461
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||    
T  47914281 ttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcgaaggattgtt 47914380  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  47914381 taataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 47914461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 171
Target Start/End: Complemental strand, 7718549 - 7718374
Alignment:
Q  6 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 105  Q
    |||| |||||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7718450  T
Q  106 aat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||          ||||||||||| |||||| ||||| ||||||| ||  ||||| ||||| ||||||| ||||||    
T  7718449 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgaga 7718374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20275455 - 20275339
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||  ||||||||||||||||| || |||| ||       ||||| ||||||||||||||||||||||||||||||||||||    
T  20275455 ttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtt 20275356  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  20275355 taataaatcagattttg 20275339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 30440811 - 30440927
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||| ||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  30440811 ttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 30440910  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  30440911 taataaatcagattttg 30440927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 164
Target Start/End: Original strand, 727594 - 727691
Alignment:
Q  67 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    ||||||||||||||||||||||| ||||||||||||||||||  ||||||||| |||||| ||||| ||||||| ||  ||||||||||| |||||||    
T  727594 gtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 727691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 18914927 - 18914747
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||| ||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| |||| |||||    
T  18914927 ttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggtttgtt 18914828  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  18914827 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 18914747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 34695288 - 34695468
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||| ||| ||||||||||||||||| || |||| ||       |||  ||||||||||||| |||||||||||||||||||||||    
T  34695288 ttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtt 34695387  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  34695388 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 34695468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 19810874 - 19810977
Alignment:
Q  68 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaat 167  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||  ||||| ||||| ||||||| ||  |||| |||||| ||||||| ||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgtggaattttctagtgaaattttagcataaaaatgtctttcatgaaaacat 19810973  T
Q  168 gaga 171  Q
    ||||    
T  19810974 gaga 19810977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 44623468 - 44623329
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| |||||| |||||||||| ||||||| ||       |||| ||| |||||||||||||||| ||||| || || ||||    
T  44623468 ttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcatatttctaaagactgtt 44623369  T
Q  101 taataaattggattttgtgagattttgtagtgtaatttta 140  Q
    |||||||||| ||||||||  ||||| ||||| |||||||    
T  44623368 taataaattgaattttgtggaattttctagtgaaatttta 44623329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 34009027 - 34009144
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtctt-gtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    ||||||||| |||||||||||| ||||||||||||| ||| || |||| ||       ||| | ||||||||||||||||||||||||||||||||||||    
T  34009027 ttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaatcattcaaatttcgaaggattgt 34009126  T
Q  100 ttaataaattggattttg 117  Q
    |||||||||  |||||||    
T  34009127 ttaataaatcagattttg 34009144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 44343588 - 44343408
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| | ||||||||||||||| || |||| ||       || | |||||||| ||||||||||||||||||||||||||||    
T  44343588 ttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaatcattcaaatttcgaaggattgtt 44343489  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| | ||||| ||||||    
T  44343488 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgaga 44343408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 47879183 - 47879363
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||  ||||||||||    
T  47879183 ttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttaaaaggattgtt 47879282  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          |||||||||||  ||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  47879283 taataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 47879363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31638890 - 31639006
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||| |  || ||||||| ||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  31638890 ttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 31638989  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  31638990 taataaatcagattttg 31639006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 41827322 - 41827492
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||| | ||       |||||||||||||||||||          | |||||||||||    
T  41827322 ttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggtattcaaaat----------ttgaaggattgtt 41827411  T
Q  101 taataaattgga----------ttttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||          ||||||| |||| ||||||||||||||||||| |||| |||||| ||||||| ||||||    
T  41827412 taataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatgaga 41827492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 43679492 - 43679545
Alignment:
Q  64 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  43679492 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 43679545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 25805761 - 25805809
Alignment:
Q  62 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg 110  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25805761 ttgtggtattcaaaatcattcaaatttcgtaggattgtttaataaattg 25805809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 43187485 - 43187433
Alignment:
Q  65 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttg 43187433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 447852 - 447907
Alignment:
Q  62 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||    
T  447852 ttgtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttg 447907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 29893089 - 29893177
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 89  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||| ||       ||||||| ||||| ||||| |||||||||||    
T  29893089 ttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtagtatttaaaataattcaaatttc 29893177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 32143046 - 32142993
Alignment:
Q  64 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  32143046 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttg 32142993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 7113530 - 7113594
Alignment:
Q  64 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgt 128  Q
    |||||||||||||| |||||||||||| |||||||||||||||||  |||||||  |||||||||    
T  7113530 gtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgt 7113594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 171
Target Start/End: Complemental strand, 37972981 - 37972879
Alignment:
Q  79 attcaaatttcgaaggattgtttaataaattggattttgtgagattttg----------tagtgtaattttaacaataaaaagtcttttatgaaaaaatg 168  Q
    ||||||||||||||||||| |||||||||||||||||||   |||||||          ||||||||||||||||| ||||||||||| ||||||| |||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  169 aga 171  Q
    |||    
T  37972881 aga 37972879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1470424 - 1470309
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| | ||||||||  | ||||||||||||||       || ||||||||||||||||| |||||||||  ||| ||||||    
T  1470424 ttgtcatttaaaaaaagtcttgtgatattcaatataaacttttcatcatttaaaaaa-gtattgtggtattcaaaatcgttcaaattttaaagcattgtt 1470326  T
Q  101 taataaattggattttg 117  Q
    |||| |||| |||||||    
T  1470325 taatgaattagattttg 1470309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 39219558 - 39219389
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat-- 108  Q
    |||||||||||| | ||||||||||||||| || |||| ||       ||||  |||||||||||||||||||||||| | | |||||||||||||||      
T  39219558 aaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattttg-atgattgtttaataaatca 39219460  T
Q  109 --------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
            ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| || |||| ||||||    
T  39219459 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgaga 39219389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 40097140 - 40097176
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40097140 ttttaaaaaagtctttaggtattcaatcaagactttt 40097176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10616956 - 10617003
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 48  Q
    |||||||||| ||||||||||||||||||| ||||||| ||| |||||    
T  10616956 ttgtcatttttaaaaagtcttgaggtattcgatcaagattttccatca 10617003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 48117785 - 48117746
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagact 40  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  48117785 ttgtcatttttgaaaagtcttgaggtattcaatcaagact 48117746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 28035031 - 28034997
Alignment:
Q  9 ttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    |||||||||||||| ||||||||||||||||||||    
T  28035031 ttaaaaaagtcttgtggtattcaatcaagactttt 28034997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 47066822 - 47066872
Alignment:
Q  121 gattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||||||||| ||||| | ||| ||||||| ||||||    
T  47066822 gattttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgaga 47066872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 3022902 - 3022934
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagactttt 43  Q
    |||||||||||| ||||||||||||||||||||    
T  3022902 aaaaaagtcttgtggtattcaatcaagactttt 3022934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 39301283 - 39301247
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  39301283 ttttaaaaaagtctttaggtatttaatcaagactttt 39301247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 41827290 - 41827322
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagactttt 43  Q
    |||||||||||| ||||||||||||||||||||    
T  41827290 aaaaaagtcttgtggtattcaatcaagactttt 41827322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 46122047 - 46122011
Alignment:
Q  84 aatttcgaaggattgtttaataaattggattttgtga 120  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  46122047 aatttcgagggattgtttaacaaattggattttgtga 46122011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 3e-60; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 4240644 - 4240474
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  4240644 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 4240545  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   |||||||||||||||||||||||| ||||||||||| ||||| | ||||||    
T  4240544 taataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaatagatgaga 4240474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 40013894 - 40013724
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||||||    
T  40013894 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaaatcattcaaatttcgaaggattgtt 40013795  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||| |||||||||||    |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  40013794 taatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 40013724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 5949123 - 5949292
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||| ||        |||||||||||||||||||||||||||||||||||||||||    
T  5949123 ttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaa-tcttgtggtattcaaaatcattcaaatttcgaaggattgtt 5949221  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  5949222 taataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 5949292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 1461330 - 1461160
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||       |||||| | |||||||||||||||||||||||||||||||||    
T  1461330 ttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatttcgaaggattgtt 1461231  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   ||||||||| |||||||||||||| ||||| ||||| ||||||| ||||||    
T  1461230 taataaattggattttgatggattttgtactgtaattttaacaagaaaaaatctttcatgaaaagatgaga 1461160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 1152295 - 1152115
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||       ||||||||||||||||||||||||||||||||| ||||||||    
T  1152295 ttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgagggattgtt 1152196  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  1152195 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgaga 1152115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 14000297 - 14000117
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||    
T  14000297 ttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtt 14000198  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  14000197 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 14000117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 13925945 - 13926123
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||||||||||||||||||||||||||||||||||||||||    
T  13925945 ttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 13926044  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatga 169  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||| ||||    
T  13926045 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatga 13926123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 7947765 - 7947592
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||| | |||||||||||||||||||||||||||||||||    
T  7947765 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaatttcgaaggattgtt 7947666  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    |||||||||||||          ||||||  ||||||||||||||||||||||| ||||||||||| |||||||    
T  7947665 taataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 7947592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 4550449 - 4550269
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  4550449 ttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 4550350  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          ||||||  ||||||||||||||||||||||| ||| ||||||| ||||||| ||||||    
T  4550349 taataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgaga 4550269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 39852372 - 39852539
Alignment:
Q  14 aaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggat 113  Q
    |||||||||||||||||||||||||||| |||||||||       |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggat 39852471  T
Q  114 tttg----------tgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||          || |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  39852472 tttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 39852539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 22746311 - 22746476
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||       |||||||| ||||||||||||||||||||||||| |||||||    
T  22746311 ttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaatgattgtt 22746410  T
Q  101 taataaattggattttgtgagattttgtag--tgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    |||||||||| ||||||   |||||||| |  |||||||||||||| ||||| ||||| |||||||    
T  22746411 taataaattgaattttgatggattttgtgggatgtaattttaacaagaaaaactctttcatgaaaa 22746476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 37013928 - 37014045
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||       |||||| ||||||||||||||||||||||||||||| |||||    
T  37013928 ttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaatttcgaagggttgtt 37014027  T
Q  101 taataaattggattttgt 118  Q
    ||||||||||||||||||    
T  37014028 taataaattggattttgt 37014045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 21147081 - 21147261
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  21147081 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 21147180  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  21147181 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 21147261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 139287 - 139393
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||||||||| || |||||||||||||||||||| |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  139287 ttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 139386  T
Q  101 taataaa 107  Q
    |||||||    
T  139387 taataaa 139393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 5273111 - 5272931
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||  ||||||||||||||||| || |||||||       |||| ||||||||||||||||||||||||||||| |||||||    
T  5273111 ttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtt 5273012  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| || |||| ||||||    
T  5273011 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgaga 5272931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 33656233 - 33656053
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||        |||  ||||||||||||||||||||||||||||||||||||    
T  33656233 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtt 33656134  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  33656133 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgaga 33656053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14465419 - 14465303
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||| ||  ||||||||||||||||| ||||||  ||       |||||||||||||||||||||||||||||||||| |||||||    
T  14465419 ttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtt 14465320  T
Q  101 taataaattggattttg 117  Q
    |||||||| ||||||||    
T  14465319 taataaatcggattttg 14465303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 849172 - 849288
Alignment:
Q  12 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 111  Q
    ||||||||||| ||||||||||||||||| || |||| ||       ||||  ||||||||||||||||||||||||||||||||||||||||||||  |    
T  849172 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 849271  T
Q  112 attttgtgagattttgt 128  Q
    ||||||  |||||||||    
T  849272 attttgatagattttgt 849288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 171
Target Start/End: Complemental strand, 7016926 - 7016751
Alignment:
Q  6 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 105  Q
    |||| ||||||||||||  |||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||||||    
T  7016926 atttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7016827  T
Q  106 aat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| || |||| ||||||    
T  7016826 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgaga 7016751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 9220899 - 9220731
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||  ||||||||||| | ||||||||||||||| || |||| ||       ||||| || |||||||||||||||||||||| ||||||||||    
T  9220899 ttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaatttctaaggattgtt 9220800  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatga 169  Q
    |||| |||| || |||||  |||||| ||||  ||||||||||  |||||||||||  |||||| ||||    
T  9220799 taatgaattagaatttgtaggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatga 9220731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 32158090 - 32157973
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    ||||||||| |||||||||||| ||||||||||||||||   | |||| ||        |||| ||||||||||||||||||||||||||||||||||||    
T  32158090 ttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgt 32157991  T
Q  100 ttaataaattggattttg 117  Q
    |||||||||| |||||||    
T  32157990 ttaataaattagattttg 32157973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 6460806 - 6460922
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||||||||| ||  |||||||||||||||| || |||||||        ||| ||||||||||||||||||||||||||||||| |||||    
T  6460806 ttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaaggtttgtt 6460905  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  6460906 taataaatcagattttg 6460922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27459141 - 27459026
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||||||||||||||||| |||| |||||||||||    
T  27459141 ttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaaatcattcagattttgaaggattgtt 27459043  T
Q  101 taataaattggattttg 117  Q
    ||||||||| |||||||    
T  27459042 taataaattagattttg 27459026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 9689695 - 9689787
Alignment:
Q  24 ggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    ||||||||||||||||| ||||||| ||       ||||||||||||| ||||||||| |||||||||| |||||||| ||||||| |||||||    
T  9689695 ggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttg 9689787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 1511451 - 1511409
Alignment:
Q  84 aatttcgaaggattgtttaataaattggattttgtgagatttt 126  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||    
T  1511451 aatttcgaagaattgtttaatagattggattttgtgggatttt 1511409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 37014038 - 37014088
Alignment:
Q  121 gattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||| |||||||||||| ||||||||||| || |||| ||||||    
T  37014038 gattttgtagtataattttaacaagaaaaagtctttcataaaaagatgaga 37014088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 26806611 - 26806578
Alignment:
Q  10 taaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||| ||||||||||||||||||||    
T  26806611 taaaaaagtcttgtggtattcaatcaagactttt 26806578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 17518474 - 17518510
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  17518474 ttttaaaaaagtcttgtggtattcaatcaagattttt 17518510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 3e-60; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 37454874 - 37455044
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||    
T  37454874 ttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtt 37454973  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||| |||||||| |||||||||||||||||||||||| ||||||| ||| ||||||| ||||||    
T  37454974 taataaattgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaga 37455044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 10728834 - 10728664
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||| |||||||||||||||| |||||||||||    
T  10728834 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaatttggaaggattgtt 10728735  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  10728734 taataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 10728664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 10660548 - 10660698
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||||||||    
T  10660548 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaaatcattcaaatttcgaaggattgtt 10660647  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaag 151  Q
    |||||||||||||||||   ||||||||||||||||||||||||| |||||    
T  10660648 taataaattggattttgatggattttgtagtgtaattttaacaatgaaaag 10660698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 39038053 - 39038223
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||| |||||||||||||||||||||| ||||||    
T  39038053 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcattcaaatttcgaagaattgtt 39038152  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   |||||||||||||||||||||||| ||||||||||| || |||| ||||||    
T  39038153 taataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaga 39038223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 11431539 - 11431719
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||    
T  11431539 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtt 11431638  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  11431639 taataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 11431719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 36674323 - 36674143
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||    
T  36674323 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtt 36674224  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  36674223 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 36674143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 50762243 - 50762073
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| ||||       |||||||||||||||||||||||| ||||||||| |||||||    
T  50762243 ttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattcaaaatcattctaatttcgaatgattgtt 50762144  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    | |||||||||||||||   |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  50762143 tgataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 50762073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 34484223 - 34484043
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||||||||    
T  34484223 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatttcgaaggattgtt 34484124  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| |||||||||||||||||||||||| ||||| ||||| ||||||| ||||||    
T  34484123 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 34484043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 44906706 - 44906526
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  44906706 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 44906607  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| |||||||||||||||||||||||| |||| |||||| ||||||| ||||||    
T  44906606 taataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgaga 44906526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 32580190 - 32580369
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  32580190 ttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 32580288  T
Q  101 taataaattggattttg--------tga--gattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||        |||  |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  32580289 taataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 32580369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 23753579 - 23753427
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  23753579 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 23753480  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaa 163  Q
    ||||||||||||||          |||||||||||||||||||| ||||||||||| ||||||    
T  23753479 taataaattggatt----------ttgtagtgtaattttaacaagaaaaagtctttcatgaaa 23753427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 26107274 - 26107454
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  26107274 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 26107373  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||| ||| || |||| ||||||    
T  26107374 taataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgaga 26107454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 40897157 - 40897337
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||| ||||||||||||||||||||||||||||||||||||    
T  40897157 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtt 40897256  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||||||||||||||| ||||||||||| ||||||| ||||||    
T  40897257 taataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 40897337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 17946301 - 17946481
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||| ||| |||||||||||||||||||||| ||||||||||    
T  17946301 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcaaaggattgtt 17946400  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  17946401 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 17946481  T

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Target: chr3; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 52618158 - 52618042
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  52618158 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 52618059  T
Q  101 taataaattggattttg 117  Q
    |||||||||||||||||    
T  52618058 taataaattggattttg 52618042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 18749632 - 18749805
Alignment:
Q  8 tttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 107  Q
    |||||||||||||||||||||||||| || ||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18749632 tttaaaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 18749731  T
Q  108 t----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |          ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  18749732 ttggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 18749805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 48379170 - 48379343
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  48379170 ttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 48379269  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    ||||||||          ||||||||||| ||||||||||||||||||||| || |||| |||||| |||||||    
T  48379270 taataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaa 48379343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 52810391 - 52810571
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| ||| |||||||    
T  52810391 ttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaatgattgtt 52810490  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||||| ||||||    
T  52810491 taataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgaga 52810571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 31646477 - 31646304
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| |||||||    
T  31646477 ttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaagattgtt 31646378  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    |||| ||||||||          |||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  31646377 taatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 31646304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 44276402 - 44276568
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||       ||||  |||||||||||||||||||||||    |||||||||    
T  44276402 ttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt----aggattgtt 44276497  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||| ||||| ||||| ||||| | ||||||    
T  44276498 taataaattggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgaga 44276568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 51737909 - 51737754
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg 110  Q
    |||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51737909 aaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg 51737810  T
Q  111 gat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttt 156  Q
    |||          |||||| |||||||| ||||||||||||||| |||||||||||    
T  51737809 gattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtcttt 51737754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 20833005 - 20833178
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||       |||||||||||||||||||||||||||||  |||||||||||    
T  20833005 ttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattcggaaggattgtt 20833104  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    ||||||||          |||||||||||||||||  ||||||||||||||||| ||||||| ||| |||||||    
T  20833105 taataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaa 20833178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 50903436 - 50903253
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn---gtcttgtggtattcaaaatcattcaaatttcgaaggatt 97  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||          |||||||||||||||||||||||||||||  ||||||||    
T  50903436 ttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggatt 50903337  T
Q  98 gtttaataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||||          |||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  50903336 gtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaatatgaga 50903253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 54628856 - 54629037
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnng-tcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||| |||||||||    
T  54628856 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaatcattcaaatttcaaaggattgt 54628955  T
Q  100 ttaataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||          ||||||||||| |||||||||||||||||||||||| ||||||||||| || |||| ||||||    
T  54628956 ttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaga 54629037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 539586 - 539481
Alignment:
Q  12 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 111  Q
    ||||||||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 539487  T
Q  112 attttg 117  Q
    ||||||    
T  539486 attttg 539481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 6975772 - 6975922
Alignment:
Q  12 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 111  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  6975772 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa--gtcttgtggtattcaaaatcattcaaatttcgaagaattatttactaaattgg 6975869  T
Q  112 attttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    | |||||| |||||| ||||  ||||| | ||  ||| ||||||| |||||||    
T  6975870 aatttgtgggattttctagtaaaatttgagcatgaaacagtctttcatgaaaa 6975922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 19253840 - 19254020
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  19253840 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 19253939  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  19253940 taataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 19254020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 20498222 - 20498402
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  20498222 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 20498321  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  20498322 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 20498402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 39842619 - 39842507
Alignment:
Q  59 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtctttta 158  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||   ||||||||| |||||||||||||| ||||||||||| |    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgtaatgtaattttaacaagaaaaagtctttca 39842520  T
Q  159 tgaaaaaatgaga 171  Q
    |||||| ||||||    
T  39842519 tgaaaagatgaga 39842507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 6035246 - 6035130
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||       |||| ||| |||||||||||||||||||||||||| | ||||    
T  6035246 ttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagcaatgtt 6035147  T
Q  101 taataaattggattttg 117  Q
    ||||||||| |||||||    
T  6035146 taataaattagattttg 6035130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 3206387 - 3206218
Alignment:
Q  12 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat--- 108  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||       
T  3206387 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 3206288  T
Q  109 -------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
           ||||||||||| |||||| ||||| ||||||| ||| ||||||||||| ||||||| ||||||    
T  3206287 attttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgaga 3206218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 10139336 - 10139159
Alignment:
Q  4 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 103  Q
    |||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||||    
T  10139336 tcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaa 10139237  T
Q  104 taaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  10139236 taaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 10139159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 27899367 - 27899525
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg 110  Q
    ||||||||| |  ||||||||||||||||| ||  ||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||      
T  27899367 aaaaaagtcatatggtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatca 27899466  T
Q  111 gattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatga 169  Q
    ||||||||  |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||    
T  27899467 gattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 27899525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 6589577 - 6589757
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||| ||| ||    
T  6589577 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagaattatt 6589676  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  6589677 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 6589757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 996276 - 996099
Alignment:
Q  4 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 103  Q
    |||||| |||||||||||| ||||||||||||||| | || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||||    
T  996276 tcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaa 996177  T
Q  104 taaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  996176 taaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 996099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 33807992 - 33807811
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||        |||| ||||||||||||||||||||||||||||||||||||    
T  33807992 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgt 33807893  T
Q  100 ttaataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  33807892 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 33807811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3999838 - 3999722
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||        ||| |||||||||||||||||||||||||||||||||||||    
T  3999838 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaaggattgtt 3999739  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  3999738 taataaatcagattttg 3999722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 35337748 - 35337864
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||  ||||||||||||||||||||||    
T  35337748 ttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaatttcgaaggattgtt 35337847  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  35337848 taataaatcagattttg 35337864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 15493053 - 15492889
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt----cgaaggat 96  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||       ||||  ||||||||||||||||||||||||      ||| ||    
T  15493053 ttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcactt-aaaaatgtctcatggtattcaaaatcattcaaatttttaattaagaat 15492955  T
Q  97 tgtttaataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaa 162  Q
    | ||||||||||||||||||||  ||| || ||||| ||||||||||| ||||| ||||| |||||    
T  15492954 tatttaataaattggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaa 15492889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29030019 - 29030134
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||||||||||||||||||||||||||||| |||||||||||    
T  29030019 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaatcattcaaattttgaaggattgtt 29030117  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  29030118 taataaatcagattttg 29030134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 33996734 - 33996554
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||        ||  |||||||||||||||||||||||||||||||||||||    
T  33996734 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaatttcgaaggattgtt 33996635  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||| | |||||| ||||| ||||||| ||  |||||||||||||| |||| ||||||    
T  33996634 taataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgaga 33996554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 40246857 - 40247037
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||| ||| ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| |||||||||||    
T  40246857 ttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtt 40246956  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||  ||  ||||||||||| ||||||| ||||||    
T  40246957 taataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgaga 40247037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 37820670 - 37820554
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||| ||||| ||||||||||||||| | || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  37820670 ttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 37820571  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  37820570 taataaatcagattttg 37820554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 52114541 - 52114669
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||| ||        |||| |||||||||||||| |||||||||||| ||||||||    
T  52114541 ttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaatttcgcaggattgt 52114640  T
Q  100 ttaataaattggattttgtgagattttgt 128  Q
    |||||||||  |||||||  |||||||||    
T  52114641 ttaataaatcagattttgatagattttgt 52114669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 29449051 - 29448871
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||  ||||||||||| | ||||||||||||||| |  |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  29449051 ttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 29448952  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||  ||||||| ||  ||||||||||| ||||||| ||||||    
T  29448951 taataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgaga 29448871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 44762230 - 44762050
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||||||||| ||  |||||||||||||||| || |||| ||       |||| |||||||| ||||| |||||| |||||||||||||||    
T  44762230 ttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaaggattgtt 44762131  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||||||||||| ||||||    
T  44762130 taataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgaga 44762050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 53929321 - 53929192
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| |||| ||||| |||||||    
T  53929321 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatatcgaacgattgtt 53929222  T
Q  101 taataaattggattttgtgagattttgtag 130  Q
    ||||||||  |||||||   ||||||||||    
T  53929221 taataaataagattttgatggattttgtag 53929192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 54625605 - 54625785
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||| |||||  |||||||||||||||| || |||| ||       |||| |||||||||||||| ||||||||||||||||||||||    
T  54625605 ttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtt 54625704  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||| ||| ||||||| ||||||    
T  54625705 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgaga 54625785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 5825139 - 5825202
Alignment:
Q  65 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgt 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgt 5825202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25418379 - 25418495
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||| ||        ||| | |||||||||||||||||||||||  ||||||||||    
T  25418379 ttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcattcaaatttgaaaggattgtt 25418478  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  25418479 taataaatcagattttg 25418495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12103642 - 12103729
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 88  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||       ||||  ||||||||||||||||||||||||    
T  12103642 ttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaattt 12103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 55235198 - 55235313
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||  ||||||||||||||| ||| ||||||| ||       ||||  || ||||||||||||||||||||||||| |||||||    
T  55235198 ttgtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaattaaaaaa-gtctcatgatattcaaaatcattcaaatttcgaaagattgtt 55235296  T
Q  101 taataaattggattttg 117  Q
    ||||||||||| |||||    
T  55235297 taataaattggtttttg 55235313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 1440135 - 1440029
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg 110  Q
    |||||||| ||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| ||||||||||||||||||      
T  1440135 aaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatca 1440036  T
Q  111 gattttg 117  Q
    |||||||    
T  1440035 gattttg 1440029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 23535946 - 23535866
Alignment:
Q  59 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgtagtgtaatttt 139  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||| ||| |||||| ||||| ||||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagatttagtgggattttctagtgaaatttt 23535866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 52080003 - 52080079
Alignment:
Q  64 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgtagtgtaatttta 140  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||| |||||| || || |||||||    
T  52080003 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgtgggattttctaatgaaatttta 52080079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 51699672 - 51699557
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||| ||||| ||||||||||||||||| || |||| ||        ||| ||||||||||||||||||||||||||||||||||| |    
T  51699672 ttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattcaaatttcgaaggattggt 51699574  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  51699573 taataaataagattttg 51699557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 18749583 - 18749630
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 48  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  18749583 ttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatca 18749630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 45862984 - 45863034
Alignment:
Q  121 gattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  45862984 gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 45863034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 22057838 - 22057891
Alignment:
Q  64 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||  |||||||    
T  22057838 gtggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttg 22057891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 27593198 - 27593234
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||||| |||||||||||||||||||||    
T  27593198 ttttaaaaaagtctttaggtattcaatcaagactttt 27593234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 36786017 - 36786053
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36786017 ttttaaaaaagtctttaggtattcaatcaagactttt 36786053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 6131308 - 6131246
Alignment:
Q  109 tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  6131308 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 6131246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 1440005 - 1439960
Alignment:
Q  83 aaatttcgaaggattgtttaataaattggattttgtgagattttgt 128  Q
    |||||| |||||||||||||||||||| |||||||  |||||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgt 1439960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 10216196 - 10216163
Alignment:
Q  10 taaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||| ||||||||||||||||||||    
T  10216196 taaaaaagtcttgtggtattcaatcaagactttt 10216163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 10225704 - 10225671
Alignment:
Q  10 taaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||| ||||||||||||||||||||    
T  10225704 taaaaaagtcttgtggtattcaatcaagactttt 10225671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 39338335 - 39338299
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  39338335 ttttaaaaaagtctttaggtattcaataaagactttt 39338299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 51737952 - 51737912
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagacttttcatcattt 51  Q
    |||||||||||| ||||||||||||||||| || |||||||    
T  51737952 aaaaaagtcttgtggtattcaatcaagactctttatcattt 51737912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 7e-58; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23987227 - 23987397
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  23987227 ttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 23987326  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||| |||||||   |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  23987327 taataaattagattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 23987397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 30967492 - 30967326
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||| ||       ||||||||||||||||||||||||||||||| ||||||||||    
T  30967492 ttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtt 30967393  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaat 167  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  30967392 taataaattggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaat 30967326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 5441417 - 5441597
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  5441417 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 5441516  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  5441517 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 5441597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 27768069 - 27768249
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  27768069 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 27768168  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  27768169 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 27768249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 54341157 - 54341337
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  54341157 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 54341256  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  54341257 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 54341337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 49501704 - 49501549
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||| ||       ||||||||| |||||||||||||||||||||||| |||||||    
T  49501704 ttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtt 49501605  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttt 156  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  49501604 taataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtcttt 49501549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 49507769 - 49507614
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||| ||       ||||||||| |||||||||||||||||||||||| |||||||    
T  49507769 ttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtt 49507670  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttt 156  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  49507669 taataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtcttt 49507614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 12913237 - 12913407
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||       ||||  |||||||||||||||||||||||| |||||||||||    
T  12913237 ttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattcaaaatcattcaaattttgaaggattgtt 12913336  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||| ||||||| ||| ||||| | ||||||    
T  12913337 taataaattggattttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgaga 12913407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 50018264 - 50018434
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||       |||||||||||||||| ||||||||||||| |||||||||||    
T  50018264 ttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatcattcaaattttgaaggattgtt 50018363  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||| |||||    |||||||||||||||||||||||| ||||||||||| | ||||| ||||||    
T  50018364 taataaattgaattttaatggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgaga 50018434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 37828595 - 37828415
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  37828595 ttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 37828496  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| ||||||||||||||||||||| || ||||||||||| ||||||| ||||||    
T  37828495 taataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagatgaga 37828415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 28483923 - 28484074
Alignment:
Q  12 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 111  Q
    ||||||||||||||||||||||||||||||||||||| ||       |||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 28484022  T
Q  112 attttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    |||||||  ||||||||||||||| |||||||| ||||||||||| |||||||    
T  28484023 attttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaa 28484074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 32684180 - 32684021
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  32684180 ttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcatttaaaaaa-gtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 32684082  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||          |||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  32684081 taataaattggatt----------ttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 32684021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 51320934 - 51321114
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  51320934 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 51321033  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          |||||||||||  ||||| ||||||||||||||||| ||||||| ||| ||||||| ||||||    
T  51321034 taataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgaga 51321114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 164
Target Start/End: Original strand, 37915843 - 37916013
Alignment:
Q  4 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||    
T  37915843 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 37915942  T
Q  104 taaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    |||||          ||||||||||| |||||||||||||| ||||||||| |||||||| || |||||||    
T  37915943 taaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaa 37916013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 5800049 - 5800154
Alignment:
Q  59 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtctttta 158  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgtgagattttgtagagtaattttaacaagaaaaagtctttaa 5800148  T
Q  159 tgaaaa 164  Q
    ||||||    
T  5800149 tgaaaa 5800154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 36479424 - 36479255
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||| ||       |||| |||||||||||||| ||||||||||||||||||| ||    
T  36479424 ttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaattattcaaatttcgaaggattatt 36479325  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   |||||| ||||| ||||||| ||| ||||||||||||||||||| ||||||    
T  36479324 taataaattggattttgatggatttt-tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgaga 36479255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 32322104 - 32322284
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  32322104 ttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 32322203  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| ||||||||||||||||||||| || |||| |||||| || |||| ||||||    
T  32322204 taataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgaga 32322284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 29649860 - 29649744
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||| |||||||    
T  29649860 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtt 29649761  T
Q  101 taataaattggattttg 117  Q
    |||||||||||||||||    
T  29649760 taataaattggattttg 29649744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 54853658 - 54853481
Alignment:
Q  4 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 103  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||       ||||||||||||||||||| ||||||||||| |||||||||||||    
T  54853658 tcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaa 54853559  T
Q  104 taaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||          |||||| |||||||||||||||||||||||| ||||| ||||| ||||||| ||||||    
T  54853558 taaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 54853481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 49835006 - 49834889
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  49835006 ttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 49834907  T
Q  101 taataaattggattttgt 118  Q
    ||||||||||||||||||    
T  49834906 taataaattggattttgt 49834889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 31314867 - 31314755
Alignment:
Q  59 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtctttta 158  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||| ||||||| ||  ||||||||||| |    
T  31314867 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 31314768  T
Q  159 tgaaaaaatgaga 171  Q
    |||||| ||||||    
T  31314767 tgaaaacatgaga 31314755  T

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Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 41725138 - 41725315
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||  |       |||||||| ||||||||||||||||||||| |||||||||||    
T  41725138 ttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaatcattcaaattttgaaggattgtt 41725237  T
Q  101 taa--taaat-----tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||  |  ||     || |||||||| |||||| ||||||||||||||||| ||||| ||||| ||||||| ||||||    
T  41725238 taaattggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 41725315  T

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Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 46635835 - 46635661
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       || | || ||||||||||||||||||||||||||||||||||    
T  46635835 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattcaaatttcgaaggattgtt 46635736  T
Q  101 taataaat----tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||    | ||||||||| |||||| ||||| ||||||| ||  ||||||||||| || |||| ||||||    
T  46635735 taataaataagattgattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgaga 46635661  T

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Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 55302856 - 55303036
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||||||||||||| || ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  55302856 ttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 55302955  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||| ||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  55302956 taataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 55303036  T

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Target: chr4; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9163089 - 9163197
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||| |||||||||  |       |||||||| |||||||||||||||||||||||||||||||||    
T  9163089 ttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtt 9163188  T
Q  101 taataaatt 109  Q
    |||||||||    
T  9163189 taataaatt 9163197  T

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Target: chr4; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 48261198 - 48261320
Alignment:
Q  59 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgagattttgtagtgtaattttaacaataaa 148  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||          ||||||||||| |||||||||||||||||||||||| |||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  149 aagtcttttatgaaaaaatgaga 171  Q
    || ||||| ||||||| ||||||    
T  48261298 aaatctttcatgaaaatatgaga 48261320  T

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Target: chr4; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 56445474 - 56445383
Alignment:
Q  65 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttt 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||| || |||| ||| |||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtgggattttctagtgaaactttagcaagaaaaagtcttt 56445383  T

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Target: chr4; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 42786708 - 42786877
Alignment:
Q  12 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat--- 108  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||       
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcat 42786807  T
Q  109 -------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
           |||||||||||  ||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  42786808 attttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgaga 42786877  T

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Target: chr4; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 25331144 - 25331324
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||| ||||||||||    
T  25331144 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcaaaggattgtt 25331243  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  25331244 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 25331324  T

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Target: chr4; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 44771047 - 44770930
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggta-ttcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    |||||||||||||||| |||||||||| ||||||||||| ||||||||| ||        |||  |||||||||||||||||||||||| ||||||||||    
T  44771047 ttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcacttaaaaaaaatctcatggtattcaaaatcattcaaattttgaaggattgt 44770948  T
Q  100 ttaataaattggattttg 117  Q
    ||||||||||||||||||    
T  44770947 ttaataaattggattttg 44770930  T

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Target: chr4; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 19741101 - 19740985
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||  |||||||| || |||||||| ||||||||||| |||| ||       ||||||||||||| ||||||||||||||||||||||||||||    
T  19741101 ttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaatttcgaaggattgtt 19741002  T
Q  101 taataaattggattttg 117  Q
    ||||||||| |||||||    
T  19741001 taataaattagattttg 19740985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 32951029 - 32950913
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  32951029 ttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 32950930  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  32950929 taataaatcagattttg 32950913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 7007388 - 7007503
Alignment:
Q  2 tgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttt 101  Q
    |||||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||    
T  7007388 tgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgttt 7007487  T
Q  102 aataaattggattttg 117  Q
    |||||||  |||||||    
T  7007488 aataaatcagattttg 7007503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 41881276 - 41881095
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||        || | ||||||||||||||||||||||||||||||||||||    
T  41881276 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaatcattcaaatttcgaaggattgt 41881177  T
Q  100 ttaataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  41881176 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 41881095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 1112906 - 1113086
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| || |||||||    
T  1112906 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaatgattgtt 1113005  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||  ||||  ||||||||||  ||||||||||| ||||||| ||||||    
T  1113006 taataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgaga 1113086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 12112958 - 12113138
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||| ||| || |||| ||       ||||  ||||||||||||||||||||||||||||||||||||    
T  12112958 ttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtt 12113057  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          |||||||||||  ||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  12113058 taataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 12113138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25446063 - 25446179
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||| ||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||| |||||||    
T  25446063 ttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtt 25446162  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  25446163 taataaatcagattttg 25446179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 28370937 - 28371053
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||| |||||||||||||||||| ||||||||||| |||||| |||| ||       ||||  ||||||||||||||||||||||||  ||||||||||    
T  28370937 ttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaatcattcaaattttaaaggattgtt 28371036  T
Q  101 taataaattggattttg 117  Q
    |||||||||| ||||||    
T  28371037 taataaattgaattttg 28371053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 28541711 - 28541827
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||| | ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||| |||||||    
T  28541711 ttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtt 28541810  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  28541811 taataaatcagattttg 28541827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 22202028 - 22202201
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||| || |||||||    
T  22202028 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcaaaagattgtt 22202127  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| |||||||    
T  22202128 taataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 22202201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 39307442 - 39307337
Alignment:
Q  5 cattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat 104  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||||       ||||||||||||||| ||||||||||||||| || |||| ||||||    
T  39307442 cattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataatcattcaaatttctaaagattatttaat 39307343  T
Q  105 aaattg 110  Q
     |||||    
T  39307342 gaattg 39307337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 40537281 - 40537173
Alignment:
Q  63 tgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaa 162  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||  |||||||   |||||||| ||| ||||||| ||  ||||||||||| |||||    
T  40537281 tgtggtattcaaaatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtggtgaaattttagcatgaaaaagtctttcatgaa 40537182  T
Q  163 aaaatgaga 171  Q
    || ||||||    
T  40537181 aacatgaga 40537173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 39479550 - 39479376
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn--gtcttgtggtattcaaaatcattcaaatttcgaaggattg 98  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||         | ||||||||||||||||||||||||||||||||| ||||    
T  39479550 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaaatcattcaaatttcgaagaattg 39479451  T
Q  99 tttaataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaa 163  Q
    ||||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||    
T  39479450 tttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaa 39479376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 1044831 - 1044993
Alignment:
Q  12 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat--- 108  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||| ||||||| |||||||||||||||||||||||       
T  1044831 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaactttcgaaggattgtttaataaatcag 1044930  T
Q  109 -------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
           ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| |||||||    
T  1044931 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 1044993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 3436606 - 3436779
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||| ||| |||||| ||||| | ||||||||||||||| || |||||||        |||  ||||||||||||||||||||||||||||||||||||    
T  3436606 ttgtcgtttaaaaaaaatcttgtgatattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtt 3436705  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    ||||||||          || |||||||| |||||||||||| ||||||||||  ||||||| ||| |||||||    
T  3436706 taataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaa 3436779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 53275852 - 53275968
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||||||||||||  |||||||||||||| |||| |||| ||       |||| ||| |||| |||||||||||||||||||||||||||     
T  53275852 ttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtg 53275951  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  53275952 taataaatcagattttg 53275968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 7249900 - 7249842
Alignment:
Q  59 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 7249842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 23464968 - 23465075
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||| |||   ||||||||||||||| || |||| ||       |||| ||||||||||||| |||||||||||||||||||||||    
T  23464968 ttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattcaaaaccattcaaatttcgaaggattgtt 23465067  T
Q  101 taataaat 108  Q
    ||||||||    
T  23465068 taataaat 23465075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 41320881 - 41320939
Alignment:
Q  59 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 41320939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 25504829 - 25504716
Alignment:
Q  4 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 103  Q
    |||||| |||||| ||||| | ||||||||||||||| || |||| ||       |||  ||| ||||||||||||||||||||||||||||||||||||    
T  25504829 tcatttaaaaaaattcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaatttcgaaggattgtttaa 25504730  T
Q  104 taaattggattttg 117  Q
    |||||  |||||||    
T  25504729 taaatcagattttg 25504716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 34228776 - 34228647
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||||||||| || ||||||||||||| | | || |||| ||       |||| |||||||||||||||||| |||||||||| |||||||    
T  34228776 ttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatttcgaatgattgtt 34228677  T
Q  101 taataaattggattttgtgagattttgtag 130  Q
    ||||||||  |||||||   ||||||||||    
T  34228676 taataaatcagattttgatggattttgtag 34228647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 37046645 - 37046528
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    ||||||||| |||||||| ||| ||||||||||||||||| || |||| ||        |||| ||| |||| |||||||||||||||||||||||||||    
T  37046645 ttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgt 37046546  T
Q  100 ttaataaattggattttg 117  Q
    |||||||||  |||||||    
T  37046545 ttaataaatcagattttg 37046528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 30009867 - 30009690
Alignment:
Q  4 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 103  Q
    |||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||  || ||||||||||    
T  30009867 tcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattttaaatgattgtttaa 30009768  T
Q  104 taaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||          ||||||||||| |||||| ||||  ||||||| ||  ||||||||||| ||||||| ||||||    
T  30009767 taaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgaga 30009690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20021357 - 20021404
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 48  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  20021357 ttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcatca 20021404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 24736466 - 24736528
Alignment:
Q  109 tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||| ||||| ||||||||||| || |||||||| ||||||| ||||||    
T  24736466 tggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgaga 24736528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 11090428 - 11090497
Alignment:
Q  102 aataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||| |||||| ||||| ||||||| || |||||||||||| || |||| ||||||    
T  11090428 aataaattggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgaga 11090497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 27454208 - 27454155
Alignment:
Q  64 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||  |||||||    
T  27454208 gtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttg 27454155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 40143822 - 40143858
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40143822 ttttaaaaaagtctttaggtattcaatcaagactttt 40143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 54509760 - 54509796
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||||| |||||||||||||||||||||    
T  54509760 ttttaaaaaagtctttaggtattcaatcaagactttt 54509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24131165 - 24131126
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagact 40  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  24131165 ttgtcatttaaaaaaagtcttgtggtattcaatcaagact 24131126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 8711997 - 8712059
Alignment:
Q  109 tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||| |||||| ||||| ||||||| ||| ||||||||||| || |||| ||||||    
T  8711997 tggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgaga 8712059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 28100617 - 28100584
Alignment:
Q  10 taaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||| ||||||||||||||||||||    
T  28100617 taaaaaagtcttgtggtattcaatcaagactttt 28100584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 50018189 - 50018222
Alignment:
Q  10 taaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||| ||||||||||||||||||||    
T  50018189 taaaaaagtcttgtggtattcaatcaagactttt 50018222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 11090372 - 11090408
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagacttttcatc 47  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  11090372 aaaaaagttttgtggtattcaatcaagacttttcatc 11090408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 26336123 - 26336159
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  26336123 ttttaaaaatgtctttaggtattcaatcaagactttt 26336159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 37915766 - 37915798
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagactttt 43  Q
    |||||||||||| ||||||||||||||||||||    
T  37915766 aaaaaagtcttgtggtattcaatcaagactttt 37915798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 41320794 - 41320830
Alignment:
Q  4 tcattttaaaaaagtcttgaggtattcaatcaagact 40  Q
    |||||| |||||||||||| |||||||||||||||||    
T  41320794 tcatttaaaaaaagtcttgtggtattcaatcaagact 41320830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 47685190 - 47685226
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    |||||||||| |||| |||||||||||||||||||||    
T  47685190 ttttaaaaaaatctttaggtattcaatcaagactttt 47685226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 7e-58; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 5495289 - 5495119
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||| |||||||||||||||||| ||||||| ||||||| ||    
T  5495289 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatttcaaaggattatt 5495190  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  5495189 taataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgaga 5495119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 6312581 - 6312761
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  6312581 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 6312680  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  6312681 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 6312761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 29396581 - 29396401
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  29396581 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 29396482  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  29396481 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 29396401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 51701587 - 51701767
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  51701587 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 51701686  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  51701687 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 51701767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 38536282 - 38536112
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| | ||       ||||||||||||||||||| ||||||||||| ||||||||||    
T  38536282 ttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtt 38536183  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  38536182 taataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 38536112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 38558500 - 38558330
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| | ||       ||||||||||||||||||| ||||||||||| ||||||||||    
T  38558500 ttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtt 38558401  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  38558400 taataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 38558330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 29219294 - 29219463
Alignment:
Q  2 tgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||       |||||||||||||||||||||||||||||  ||||||||||||    
T  29219294 tgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgttt 29219393  T
Q  102 aataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||||   |||||||||||||||||||||||| ||||||| ||| ||||||| ||||||    
T  29219394 aataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaga 29219463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 18798498 - 18798658
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  18798498 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 18798597  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||          |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  18798598 taataaattg----------gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 18798658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 45272594 - 45272762
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||        ||| |||||||||||||| ||| |||||||||||||| |||    
T  45272594 ttgtcattttaaaaa-gtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaaaattatttaaatttcgaaggat-gtt 45272691  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||| ||||||    
T  45272692 taataaattggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgaga 45272762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 25612164 - 25612344
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||    
T  25612164 ttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtt 25612263  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||||| ||||||    
T  25612264 taataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagatgaga 25612344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 9322693 - 9322513
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||       ||| |||||||||||||||||||||||||| |||||||||||    
T  9322693 ttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaatcattcaaatttagaaggattgtt 9322594  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          |||||||| || |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  9322593 taataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 9322513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 15835246 - 15835066
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||| | ||||||||||    
T  15835246 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaattgcaaaggattgtt 15835147  T
Q  101 taataaattggattttg----------tgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||          || |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  15835146 taataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 15835066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 28387586 - 28387406
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||| ||||||||||||||||||||||||    
T  28387586 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcattcaaatttcgaaggattgtt 28387487  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| ||||||||||| |||||||||||| ||||||||||| || |||| ||||||    
T  28387486 taataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgaga 28387406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 48177655 - 48177475
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||| ||       |||||||||||||||||||||||||||||||||| |||||||    
T  48177655 ttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtt 48177556  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||          |||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  48177555 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 48177475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 46328049 - 46328214
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  46328049 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtt 46328148  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttt 156  Q
    |||| |||          ||||||||||| |||||||||||||||||||||||| |||||||||||    
T  46328149 taattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 46328214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 48668965 - 48668798
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||| ||||||||||||||||    ||||||||| ||       |||  |||||||||||||| |||||||||||||| |||||||    
T  48668965 ttgtcattttaaaaaagttttgaggtattcaatcat---ttttcatcacttaaaaaaagtcacgtggtattcaaaattattcaaatttcgaaagattgtt 48668869  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  48668868 taataaattggattttgtgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 48668798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 49230893 - 49231008
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||| ||    
T  49230893 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatt 49230992  T
Q  101 taataaattggatttt 116  Q
    ||||||||||||||||    
T  49230993 taataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9577625 - 9577509
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||| |||| |||||| |||||| |||| ||       |||||||| ||||||||||||||||||||| |||||||||||    
T  9577625 ttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttagaaggattgtt 9577526  T
Q  101 taataaattggattttg 117  Q
    |||||||||||||||||    
T  9577525 taataaattggattttg 9577509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 21222154 - 21222334
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| | |||||||||||||||||||||||||||||||||||    
T  21222154 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatcattcaaatttcgaaggattgtt 21222253  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  21222254 taataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 21222334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 28824565 - 28824386
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||||||||||||||||||||||||||||||||| |||||||    
T  28824565 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatcattcaaatttcgaa-gattgtt 28824467  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||| | ||||||||||  |||||||||||||| |||| ||||||    
T  28824466 taataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgaga 28824386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 35279679 - 35279859
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||| ||||||||||||||||||    
T  35279679 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaaggattgtt 35279778  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||| ||||  ||||||||||| ||||||| ||||||    
T  35279779 taataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgaga 35279859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 50192744 - 50192563
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    |||||||||||||||||||||| ||||||||||||||||| || |||| ||        |||| ||||||||||||||||||||||||| ||||||||||    
T  50192744 ttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgt 50192645  T
Q  100 ttaataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  50192644 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 50192563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 19452001 - 19451821
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| |||||| |||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||||||| |||    
T  19452001 ttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatcgtt 19451902  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  19451901 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 19451821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 32589129 - 32588966
Alignment:
Q  18 tcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat--------- 108  Q
    ||||| || |||||||||||||| ||||||| ||       |||||||||||||||||||||||||||||| |||||||||||||||||||             
T  32589129 tcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttg 32589030  T
Q  109 -tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
     |||||||||||||||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  32589029 atggattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaacatgaga 32588966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 47784404 - 47784532
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg 110  Q
    |||||||||||| ||||||||||||||||| ||  ||||||       ||||||||||||||||||| ||||||| ||| || |||||||||||||||||    
T  47784404 aaaaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaa-gtcttgtggtattcaaaattattcaaacttctaaagattgtttaataaattg 47784502  T
Q  111 gattttgtgagattttgtagtgtaatttta 140  Q
    |||||||||||||||| ||||  |||||||    
T  47784503 gattttgtgagattttctagttaaatttta 47784532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 33025578 - 33025690
Alignment:
Q  59 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtctttta 158  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||||| |||||| || |  ||||||| ||  ||||||||||| |    
T  33025578 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaatacatcagattttgtgggattttctaataaaattttagcatgaaaaagtctttca 33025677  T
Q  159 tgaaaaaatgaga 171  Q
    |||||| ||||||    
T  33025678 tgaaaacatgaga 33025690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35679321 - 35679205
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||| |||||  |||||||||||||||| || |||| ||       ||| ||||||||||||||||||||||||||||||||||||||    
T  35679321 ttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaatttcgaaggattgtt 35679222  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  35679221 taataaatcagattttg 35679205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 6304446 - 6304267
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaaga-cttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    ||||||||| |||||||||||| ||||||||| ||| | || || |||| ||       |||| ||||||||||||||||||||||||||||||||||||    
T  6304446 ttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgt 6304347  T
Q  100 ttaataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatga 169  Q
    |||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||    
T  6304346 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 6304267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 171
Target Start/End: Complemental strand, 45760197 - 45760022
Alignment:
Q  6 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 105  Q
    |||| ||||||||| || ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||| |||||||||||||||||||    
T  45760197 atttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaacttcgaaggattgtttaata 45760098  T
Q  106 aat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||          ||||||||||| |||||| ||||| ||||||| ||  ||||||| ||| ||||||| ||||||    
T  45760097 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgaga 45760022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 45535951 - 45536124
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| || ||||| ||| ||||||||||||||||| || |||  ||       |||| ||||||||||||||||||||||||||||| |||||||    
T  45535951 ttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtt 45536050  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| |||||||    
T  45536051 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 45536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 730155 - 730272
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||        |||| |||||||||||||||||||||||||||| | |||||    
T  730155 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgacgaattgt 730254  T
Q  100 ttaataaattggattttg 117  Q
    |||||||||  |||||||    
T  730255 ttaataaatcagattttg 730272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 31622591 - 31622527
Alignment:
Q  62 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagatttt 126  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  31622591 ttgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttgtgagatttt 31622527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 169
Target Start/End: Complemental strand, 49198399 - 49198284
Alignment:
Q  64 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtc 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||    
T  49198399 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 49198300  T
Q  154 ttttatgaaaaaatga 169  Q
    ||| ||||||| ||||    
T  49198299 tttcatgaaaacatga 49198284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29556111 - 29556227
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||| |||| |||||||||||| | ||||||||||||||| || |||| ||        ||| ||| ||||||||||||||||||||||||| |||||||    
T  29556111 ttgttatttaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaaagattgtt 29556210  T
Q  101 taataaattggattttg 117  Q
    ||||||||| |||||||    
T  29556211 taataaattagattttg 29556227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 47780719 - 47780898
Alignment:
Q  2 tgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttt 101  Q
    |||||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||| ||  |||||||||||    
T  47780719 tgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgttt 47780818  T
Q  102 aataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||          ||||||||||| |||||| ||||| ||||||||||  ||||||| ||| ||||||| ||||||    
T  47780819 aataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgaga 47780898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8141321 - 8141243
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatca 79  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||       |||||| ||||||||||||||    
T  8141321 ttgtcattttaaaaaagtcttgaggtattcaatcaagactattcatcacttaaaaaaagtcttgaggtattcaaaatca 8141243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 47654545 - 47654428
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    ||||||||| ||| |||||||| ||||||||||||| ||| || |||| ||        |||| |||||||||||||| |||||||||||||||||||||    
T  47654545 ttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgt 47654446  T
Q  100 ttaataaattggattttg 117  Q
    |||||||||  |||||||    
T  47654445 ttaataaatcagattttg 47654428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 31572329 - 31572274
Alignment:
Q  62 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  31572329 ttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttg 31572274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 37014833 - 37014717
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||  || |||||||| ||||||||||||| | | ||||||| ||       |||||||| |||||||||||||||||||||| || |||||||    
T  37014833 ttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttctaaagattgtt 37014734  T
Q  101 taataaattggattttg 117  Q
    | |||||||| ||||||    
T  37014733 ttataaattgaattttg 37014717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 49418091 - 49418207
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||| |  || |||||||||| |||||| || |||| ||       |||| |||||||||||||||||||||||||| ||||||||||    
T  49418091 ttgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtt 49418190  T
Q  101 taataaattggattttg 117  Q
    ||||||||  |||||||    
T  49418191 taataaatcagattttg 49418207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 955823 - 955896
Alignment:
Q  67 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgtagtgtaatttta 140  Q
    |||||||||||||||||||||||||||| |||||||||||||  |||||||   |||||| ||||| |||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggattttctagtgaaatttta 955896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 48524326 - 48524490
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||| || || |||||| |||||| ||| || |||| ||       |||||||| ||||||||||||||||||||| ||| |||||||    
T  48524326 ttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaatcattcaaattttgaaagattgtt 48524425  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtctt 155  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||||||  ||||||||||    
T  48524426 taataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 51085860 - 51085918
Alignment:
Q  59 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    |||| |||||||||||||| |||||||||| |||||||| || ||||||||||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttg 51085918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 10896845 - 10896882
Alignment:
Q  6 attttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    |||||||||||||||| |||||||||||||||||||||    
T  10896845 attttaaaaaagtctttaggtattcaatcaagactttt 10896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 1928442 - 1928406
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||||| |||||||||||||||||||||    
T  1928442 ttttaaaaaagtctttaggtattcaatcaagactttt 1928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 36402293 - 36402329
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36402293 ttttaaaaaagtctttaggtattcaatcaagactttt 36402329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22183377 - 22183457
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 81  Q
    ||||||||| |||||||||||| ||||||||||||||| | || |||| ||       |||| ||||||||||||||||||    
T  22183377 ttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 29208801 - 29208837
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  29208801 ttttaaaaatgtctttaggtattcaatcaagactttt 29208837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 33243348 - 33243312
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    |||||||||||| || |||||||||||||||||||||    
T  33243348 ttttaaaaaagtttttaggtattcaatcaagactttt 33243312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 33263521 - 33263485
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    |||||||||||| || |||||||||||||||||||||    
T  33263521 ttttaaaaaagtttttaggtattcaatcaagactttt 33263485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 42657763 - 42657795
Alignment:
Q  10 taaaaaagtcttgaggtattcaatcaagacttt 42  Q
    ||||||||||||| |||||||||||||||||||    
T  42657763 taaaaaagtcttgtggtattcaatcaagacttt 42657795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 30385249 - 30385081
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||    
T  30385249 ttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 30385150  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||||||| |||||||||||||||||||||||  | ||||||||| ||||||| ||||||    
T  30385149 taataaattggattttgtgggattttgtagtgtaattttaaca--acaaagtctttcatgaaaagatgaga 30385081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 31895709 - 31895889
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  31895709 ttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 31895808  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||||||||||||||| ||||||||||| ||||||| ||||||    
T  31895809 taataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 31895889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 34773422 - 34773602
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||    
T  34773422 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtt 34773521  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| ||||||| |||||||||||||||| ||||||||||| ||||||| ||||||    
T  34773522 taataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 34773602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 14262625 - 14262452
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||    
T  14262625 ttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtt 14262526  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    |||||||||||||          |||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  14262525 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 14262452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 31067567 - 31067676
Alignment:
Q  62 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatga 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| || |    
T  31067567 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataa 31067666  T
Q  162 aaaaatgaga 171  Q
    ||| ||||||    
T  31067667 aaagatgaga 31067676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 34759243 - 34759062
Alignment:
Q  1 ttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||| |||||||||    
T  34759243 ttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttccaaggattgt 34759144  T
Q  100 ttaataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||          |||||| |||||||||||||||||||||||| ||||| ||||| ||||||| ||||||    
T  34759143 ttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 34759062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 7497099 - 7497268
Alignment:
Q  11 aaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg 110  Q
    |||||||||||| ||||||||||||||| ||||||||| ||       ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7497099 aaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattg 7497198  T
Q  111 gattttg-tg--------agattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||| ||         |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  7497199 gattttgatggattttgtggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 7497268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 79 - 171
Target Start/End: Complemental strand, 4200541 - 4200449
Alignment:
Q  79 attcaaatttcgaaggattgtttaataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 4200449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 6197670 - 6197490
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  6197670 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 6197571  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  6197570 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 6197490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 7051858 - 7051987
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||| ||||||||||| ||||||| ||       ||| |||| |||||||||||||||||||||||||||||||||    
T  7051858 ttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatttcgaaggattgtt 7051957  T
Q  101 taataaattggattttgtgagattttgtag 130  Q
    |||||||||||||||||   ||||||||||    
T  7051958 taataaattggattttgatggattttgtag 7051987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 2300930 - 2300750
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||| ||       ||||  ||||||| ||||||||||||||||||||||||||||    
T  2300930 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaatcattcaaatttcgaaggattgtt 2300831  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  2300830 taataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 2300750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 1391637 - 1391817
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| || ||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||| |||||||||||    
T  1391637 ttgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtt 1391736  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||  ||  ||||||||||| ||||||| ||||||    
T  1391737 taataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgaga 1391817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 28002678 - 28002856
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||  ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| |||||||||||    
T  28002678 ttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttggaaggattgtt 28002777  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatga 169  Q
    ||||||||          |||||||||||| ||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||    
T  28002778 taataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 28002856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29076611 - 29076728
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    ||||||||| |||||||||||| ||||||||||| ||| | || |||| ||        |||| || |||||||||||||||||||||||||||||||||    
T  29076611 ttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaatcattcaaatttcgaaggattgt 29076710  T
Q  100 ttaataaattggattttg 117  Q
    |||||||||  |||||||    
T  29076711 ttaataaatcagattttg 29076728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 3848225 - 3848341
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||| |||| ||| |||| |||||||||||||  ||||| ||       || |||||||||||||||||||| |||||| ||| |||||||    
T  3848225 ttgtcatttaaaacaagtattgtggtaatcaatcaagactt--catcacttaaaaaaagttttgtggtattcaaaatcatttaaattttgaatgattgtt 3848322  T
Q  101 taataaattggattttgtg 119  Q
    |||||||||| ||||||||    
T  3848323 taataaattgaattttgtg 3848341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 29111652 - 29111702
Alignment:
Q  67 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  29111652 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 29111702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 656982 - 657065
Alignment:
Q  5 cattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 88  Q
    ||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| ||||||||| |||||||||||||||    
T  656982 catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatcattcaaattt 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 10644052 - 10644016
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10644052 ttttaaaaaagtctttaggtattcaatcaagactttt 10644016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 30877898 - 30877934
Alignment:
Q  7 ttttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30877898 ttttaaaaaagtctttaggtattcaatcaagactttt 30877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 13896 - 14066
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||| || |||||||    
T  13896 ttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtt 13995  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   ||||||||||||  ||||||| || ||||||||||| ||||||| ||||||    
T  13996 taataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgaga 14066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 21431 - 21261
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||| || |||||||    
T  21431 ttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtt 21332  T
Q  101 taataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||   ||||||||||||  ||||||| || ||||||||||| ||||||| ||||||    
T  21331 taataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgaga 21261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 28463 - 28536
Alignment:
Q  99 tttaataaattggattttgtgagattttg-tagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||||||||||||   ||||||| |||||  ||||||| || ||||||||||| ||||||| ||||||    
T  28463 tttaataaattggattttgatggattttggtagtgggattttaataagaaaaagtctttcatgaaaagatgaga 28536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 10574 - 10754
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||||| ||||||||||    
T  10574 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcaaaggattgtt 10673  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          |||||||| || |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  10674 taataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 10754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4214 - 4330
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||    
T  4214 ttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtt 4313  T
Q  101 taataaattggattttg 117  Q
    |||||||||||||||||    
T  4314 taataaattggattttg 4330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 4135 - 4172
Alignment:
Q  6 attttaaaaaagtcttgaggtattcaatcaagactttt 43  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  4135 attttgaaaaagtcttgtggtattcaatcaagactttt 4172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 877 - 1057
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcgaaggattgt 99  Q
    |||||||||||||||| || |||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||||||||| ||| |    
T  877 ttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagaattat 976  T
Q  100 ttaataaat---------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||||||         ||||||||||| |||||||||||||||||||||| | ||||||||||| || |||| ||||||    
T  977 ttaataaatagattttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaaatatgaga 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 39810 - 39637
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    |||||||||| ||||||||||||  ||||||||||||| ||||||||| ||       ||| ||||||||||||||||||||||| ||||||||||| ||    
T  39810 ttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaatcattcaaacttcgaaggattatt 39711  T
Q  101 taataaattggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    |||||||||||||          |||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  39710 taataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 39637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 100225 - 100405
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||||||| |||| |||||||||||| || |||| ||       |||| |||||||||||||||||||||||||| ||||||||||    
T  100225 ttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtt 100324  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||          ||||||||||| | |||| ||||| ||||||||||| ||||||||||| ||||||| ||||||    
T  100325 taataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgaga 100405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 15226 - 15048
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  15226 ttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 15127  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatga 169  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||    
T  15126 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 15048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 15869 - 15691
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||    
T  15869 ttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 15770  T
Q  101 taataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatga 169  Q
    ||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||    
T  15769 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 15691  T

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Target: scaffold0054 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 164
Target Start/End: Complemental strand, 37089 - 36927
Alignment:
Q  12 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 111  Q
    ||||||||||| | ||||||||||||||| ||  ||||||       |||||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  37089 aaaaagtcttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattgg 36990  T
Q  112 at----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaa 164  Q
    ||          |||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  36989 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 36927  T

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Target: scaffold0054; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 37058 - 37027
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  37058 ttgtcattttaaaaaagtcttgaggtattcaa 37027  T

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Target: scaffold0347 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 14878 - 14954
Alignment:
Q  95 attgtttaataaattggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  14878 attgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 14954  T

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Target: scaffold0151 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 38786 - 38618
Alignment:
Q  12 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataa----a 107  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||    |    
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataatcaga 38687  T
Q  108 t-----tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |     ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| ||||||| ||||||    
T  38686 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 38618  T

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Target: scaffold0042 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 58262 - 58089
Alignment:
Q  9 ttaaaaaagtcttgaggtattcaatcaagactttt-catcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 107  Q
    |||||||||||||| |||||||| ||||||||||| ||||| ||       ||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  58262 ttaaaaaagtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtattcaaaatcattcaaatttcgaatgattgtttaataaa 58163  T
Q  108 ttggat----------tttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||          |||||| ||||||||||| |||||||||||| | ||| ||||| ||||||| ||||||    
T  58162 ttggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaaagatgaga 58089  T

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Target: scaffold0004 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 102107 - 102289
Alignment:
Q  1 ttgtcattttaaaaaag--tcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattg 98  Q
    ||||||||| |||||||  ||||| ||||||||||||||||| || |||| ||       |||| ||||||||||||||||||||||||||||| |||||    
T  102107 ttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattg 102206  T
Q  99 tttaataaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    ||||||||||          ||||||||||| |||||| ||||| ||||||| ||  ||||||||||| || |||| ||||||    
T  102207 tttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgaga 102289  T

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Target: scaffold0113 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 39085 - 38908
Alignment:
Q  4 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa 103  Q
    |||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| ||| ||||||||||||||||||||| ||||||||||||||    
T  39085 tcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaa 38986  T
Q  104 taaat----------tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttttatgaaaaaatgaga 171  Q
    |||||          ||||||||||| |||||| ||||| ||||||  ||  ||||||||||| ||||||| ||||||    
T  38985 taaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgaga 38908  T

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Target: scaffold0276 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 732 - 625
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 100  Q
    ||||||||| |||||||| ||| ||||||||||||| ||| || |||| ||        | | ||||||||||||||||||||||||| |||||||||||    
T  732 ttgtcatttaaaaaaagtattgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatttggaaggattgtt 633  T
Q  101 taataaat 108  Q
    ||||||||    
T  632 taataaat 625  T

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Target: scaffold0839 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 3767 - 3720
Alignment:
Q  109 tggattttgtgagattttgtagtgtaattttaacaataaaaagtcttt 156  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||    
T  3767 tggattttgtgggattttgtagtgtaattttaacaagaaaaggtcttt 3720  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 222583 - 222627
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttca 45  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||    
T  222583 ttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 222627  T

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Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 233751 - 233795
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttca 45  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||    
T  233751 ttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 233795  T

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Target: scaffold0010; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 234599 - 234643
Alignment:
Q  1 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttca 45  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||    
T  234599 ttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 234643  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 199905 - 199955
Alignment:
Q  67 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 117  Q
    ||||| |||||||||||||||| ||| || |||||||||||||| ||||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttg 199955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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