View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5640_low_11 (Length: 237)
Name: NF5640_low_11
Description: NF5640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5640_low_11 |
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Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 10 - 221
Target Start/End: Original strand, 525326 - 525537
Alignment:
| Q |
10 |
agcaaagggaaaaatgaaatttggggaaaagaaagcgaacaataaactaactatttggaggttcctttaaaaaatatacgattgaattttgcatgttgaa |
109 |
Q |
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| T |
525326 |
agcaaagggaaaaatgaaatttggggaaaagaaagcgaacaataaactaactatttggaggttcctttaaaaaatatacgattgaattttgcatgttgaa |
525425 |
T |
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| Q |
110 |
taaaattaaatgaattcgtccctgaaacagttgaggttactattttatttaataccactagctagtatagtagtgaaataagtgattcaagtcctaggaa |
209 |
Q |
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| T |
525426 |
taaaattaaatgaattcgtccctgaaacagttgaggttactattttatttaataccactagctagtatagtagtgaaataagtgattcaagtcctaggaa |
525525 |
T |
|
| Q |
210 |
aaaagaataaag |
221 |
Q |
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|||||||||||| |
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| T |
525526 |
aaaagaataaag |
525537 |
T |
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