View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5640_low_14 (Length: 203)
Name: NF5640_low_14
Description: NF5640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5640_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 34899571 - 34899398
Alignment:
| Q |
1 |
gctaccaactaattatttgtaagtcttagcagacacttcttcatagannnnnnnngttgaagaagtcaaaaattatattaaacgaaaaagagatcccaat |
100 |
Q |
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| T |
34899571 |
gctaccaactaattatttgtaagtcttagcagacacttcttcatagattttttttgttgaagaagtcaaaaattatattaaacgaaaaagagatcccaat |
34899472 |
T |
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| Q |
101 |
aaatacaagttgagtttaagaaggatccaaatagcaaaacaagatgcaatgagagaagtgtcaaaacaaaaggg |
174 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||| |
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| T |
34899471 |
aaatacaagttgagtttaagaaggatccaaatagcaccacaagaaacaattagagaagtgtcaaaacaaaaggg |
34899398 |
T |
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