View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5650_high_7 (Length: 347)
Name: NF5650_high_7
Description: NF5650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5650_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 27 - 337
Target Start/End: Original strand, 978894 - 979205
Alignment:
| Q |
27 |
aaggtttatgtagggtaacagacaaaagcacatagaaaaagaaaaggtgaatacgctctgataaagaaatcaataattcttgtagagtacaactgaaaga |
126 |
Q |
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| T |
978894 |
aaggtttctgtagggtaacagacaaaagcacagagaaaaagaaaaggtgaatacattatgataaagaaatcaataattcttgtagagtacaactgaaaga |
978993 |
T |
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| Q |
127 |
aagaaacacatataacaacccaggagataaaagattctagcaccagggggacccaaacaaaagcaaaggaaaaacctcagaaatcaagaagaggggatta |
226 |
Q |
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|||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||||| |
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| T |
978994 |
aagagacacatataagaacccaggagataaaagattctagcaccaggtggacccaaacagaagcaaaggaaaaacctcaaaaatcaagaagagaagatta |
979093 |
T |
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| Q |
227 |
atcttgggtcaaggtgaagaaaaggcaaaaaggaaagccaaagaataaactcaaaggaacataattcggttggaaattgagatgtaaacagggga-aaaa |
325 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||| |||| |
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| T |
979094 |
atcttgggtcaaggtgaagaaaaggcaaaaaggaaagccaaagaataaactcaaaggaacctgattcgattggaaattgagatgtaaacaggggataaaa |
979193 |
T |
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| Q |
326 |
ctctgagtatta |
337 |
Q |
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|||||||||||| |
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| T |
979194 |
ctctgagtatta |
979205 |
T |
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