View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5650_low_12 (Length: 256)

Name: NF5650_low_12
Description: NF5650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5650_low_12
NF5650_low_12
[»] chr6 (76 HSPs)
chr6 (19-247)||(20634911-20635139)
chr6 (19-247)||(22385994-22386222)
chr6 (19-239)||(17609045-17609265)
chr6 (19-247)||(7586887-7587114)
chr6 (123-247)||(12953726-12953849)
chr6 (122-247)||(11205421-11205545)
chr6 (153-247)||(25678891-25678984)
chr6 (46-242)||(21119027-21119222)
chr6 (122-247)||(11234944-11235068)
chr6 (86-242)||(19453259-19453415)
chr6 (122-247)||(18554745-18554870)
chr6 (19-247)||(21127423-21127649)
chr6 (46-247)||(25518058-25518259)
chr6 (153-247)||(25687374-25687467)
chr6 (148-247)||(22292369-22292467)
chr6 (148-247)||(27167063-27167161)
chr6 (122-247)||(31930898-31931023)
chr6 (122-247)||(18835254-18835378)
chr6 (163-230)||(14052130-14052198)
chr6 (148-247)||(18826859-18826957)
chr6 (148-247)||(22308264-22308362)
chr6 (122-242)||(9934239-9934359)
chr6 (164-247)||(14070803-14070888)
chr6 (140-247)||(17047052-17047159)
chr6 (152-232)||(15301540-15301618)
chr6 (122-247)||(17742326-17742451)
chr6 (174-247)||(19623323-19623397)
chr6 (140-236)||(17063696-17063792)
chr6 (143-241)||(27720840-27720937)
chr6 (140-242)||(27505410-27505513)
chr6 (198-247)||(29917396-29917445)
chr6 (184-247)||(3680467-3680531)
chr6 (183-247)||(25787214-25787278)
chr6 (148-247)||(31571891-31571990)
chr6 (185-247)||(24719464-24719527)
chr6 (181-240)||(29765045-29765104)
chr6 (197-247)||(12347460-12347510)
chr6 (161-230)||(13601497-13601567)
chr6 (174-247)||(14101169-14101243)
chr6 (189-247)||(17746405-17746463)
chr6 (153-230)||(21624414-21624492)
chr6 (197-247)||(24116195-24116245)
chr6 (174-247)||(25591966-25592040)
chr6 (152-224)||(25593393-25593463)
chr6 (140-247)||(28252182-28252290)
chr6 (140-247)||(28357329-28357437)
chr6 (153-247)||(4630351-4630446)
chr6 (153-247)||(12416976-12417071)
chr6 (185-234)||(14923919-14923968)
chr6 (180-244)||(15478479-15478544)
chr6 (198-247)||(15551395-15551444)
chr6 (174-244)||(16876247-16876320)
chr6 (153-247)||(16929931-16930026)
chr6 (153-247)||(16959102-16959197)
chr6 (174-234)||(19470011-19470072)
chr6 (184-244)||(23296140-23296201)
chr6 (153-247)||(26024939-26025034)
chr6 (153-247)||(26035513-26035608)
chr6 (153-247)||(27341174-27341269)
chr6 (140-242)||(27372300-27372403)
chr6 (153-247)||(27401914-27402009)
chr6 (153-247)||(27412573-27412668)
chr6 (140-242)||(27462650-27462753)
chr6 (153-247)||(27819085-27819180)
chr6 (153-247)||(29384232-29384327)
chr6 (153-247)||(32301664-32301759)
chr6 (153-247)||(32312353-32312448)
chr6 (183-247)||(7376379-7376443)
chr6 (183-247)||(10404159-10404223)
chr6 (183-247)||(12827204-12827268)
chr6 (122-219)||(19289957-19290055)
chr6 (183-247)||(20030524-20030588)
chr6 (183-247)||(20063275-20063339)
chr6 (184-247)||(20113368-20113432)
chr6 (176-247)||(24729250-24729322)
chr6 (187-247)||(26043728-26043788)
[»] scaffold0177 (1 HSPs)
scaffold0177 (19-247)||(21067-21295)
[»] chr3 (82 HSPs)
chr3 (19-247)||(15832597-15832825)
chr3 (19-247)||(15848331-15848559)
chr3 (19-247)||(22150435-22150663)
chr3 (19-247)||(13147482-13147710)
chr3 (102-247)||(49989533-49989678)
chr3 (19-224)||(11909807-11910012)
chr3 (19-230)||(12753382-12753593)
chr3 (19-230)||(45862319-45862530)
chr3 (19-242)||(17017220-17017442)
chr3 (154-247)||(13953587-13953680)
chr3 (61-247)||(17006425-17006611)
chr3 (46-247)||(51989763-51989964)
chr3 (123-242)||(10528665-10528786)
chr3 (149-247)||(15651715-15651812)
chr3 (163-247)||(37411968-37412053)
chr3 (140-247)||(31114604-31114711)
chr3 (148-247)||(1053234-1053332)
chr3 (122-247)||(1063637-1063761)
chr3 (19-247)||(41044931-41045159)
chr3 (121-247)||(29947957-29948084)
chr3 (121-247)||(29997111-29997238)
chr3 (148-247)||(8996567-8996665)
chr3 (148-247)||(9007119-9007217)
chr3 (122-248)||(8740734-8740859)
chr3 (122-223)||(15663374-15663474)
chr3 (140-247)||(21735683-21735790)
chr3 (148-247)||(17282045-17282142)
chr3 (122-247)||(13199859-13199984)
chr3 (174-247)||(27882934-27883007)
chr3 (121-247)||(29934171-29934298)
chr3 (176-247)||(29952178-29952250)
chr3 (121-247)||(29983325-29983452)
chr3 (176-247)||(30001332-30001404)
chr3 (153-247)||(16076458-16076552)
chr3 (140-222)||(51340291-51340372)
chr3 (184-247)||(17239664-17239728)
chr3 (122-236)||(14580637-14580751)
chr3 (19-110)||(51340203-51340294)
chr3 (174-247)||(2560529-2560603)
chr3 (174-234)||(26418431-26418492)
chr3 (152-230)||(13781345-13781421)
chr3 (185-247)||(13931350-13931413)
chr3 (184-242)||(2245923-2245981)
chr3 (174-247)||(6090070-6090144)
chr3 (184-233)||(6252774-6252824)
chr3 (198-244)||(16031964-16032010)
chr3 (201-247)||(17960981-17961027)
chr3 (189-247)||(27172428-27172486)
chr3 (174-247)||(52919808-52919882)
chr3 (153-247)||(504778-504873)
chr3 (153-247)||(527144-527239)
chr3 (198-247)||(3238060-3238109)
chr3 (153-247)||(4743268-4743363)
chr3 (153-247)||(4753855-4753950)
chr3 (153-247)||(5510226-5510321)
chr3 (153-247)||(5520404-5520499)
chr3 (153-247)||(16385605-16385700)
chr3 (174-242)||(16881636-16881705)
chr3 (152-247)||(20645478-20645571)
chr3 (198-247)||(23538905-23538954)
chr3 (153-247)||(24659430-24659525)
chr3 (153-247)||(24670010-24670105)
chr3 (153-247)||(35186907-35187002)
chr3 (153-247)||(35579032-35579127)
chr3 (153-247)||(41683208-41683303)
chr3 (153-247)||(41693777-41693872)
chr3 (198-242)||(46350592-46350637)
chr3 (184-247)||(46797136-46797201)
chr3 (187-247)||(933192-933252)
chr3 (183-247)||(1795093-1795157)
chr3 (183-247)||(7805128-7805192)
chr3 (183-247)||(11206683-11206747)
chr3 (183-247)||(11217334-11217398)
chr3 (161-247)||(13939228-13939313)
chr3 (183-247)||(15194649-15194713)
chr3 (183-247)||(17910615-17910679)
chr3 (183-247)||(19121450-19121514)
chr3 (184-247)||(20724441-20724505)
chr3 (183-247)||(24707165-24707229)
chr3 (183-247)||(29906792-29906856)
chr3 (183-247)||(48336803-48336867)
chr3 (19-67)||(49989489-49989537)
[»] chr4 (54 HSPs)
chr4 (19-242)||(33377594-33377817)
chr4 (19-247)||(36210726-36210954)
chr4 (19-247)||(14779059-14779290)
chr4 (46-247)||(14711395-14711597)
chr4 (122-244)||(31267411-31267532)
chr4 (122-247)||(11535364-11535488)
chr4 (154-247)||(39532318-39532410)
chr4 (61-242)||(17994374-17994553)
chr4 (163-247)||(18007705-18007788)
chr4 (122-247)||(23508661-23508786)
chr4 (140-240)||(19241555-19241655)
chr4 (148-247)||(18775616-18775715)
chr4 (148-247)||(18775947-18776046)
chr4 (122-247)||(49002596-49002721)
chr4 (122-247)||(11514554-11514678)
chr4 (174-247)||(18775299-18775372)
chr4 (174-247)||(55650894-55650967)
chr4 (189-247)||(11915054-11915113)
chr4 (148-247)||(10290170-10290269)
chr4 (153-247)||(16819965-16820059)
chr4 (174-247)||(23749862-23749936)
chr4 (148-247)||(25656680-25656780)
chr4 (197-247)||(29681215-29681265)
chr4 (174-247)||(37986311-37986385)
chr4 (174-234)||(3394988-3395049)
chr4 (148-247)||(10300079-10300178)
chr4 (198-234)||(15475859-15475895)
chr4 (198-241)||(10661871-10661914)
chr4 (198-241)||(10876016-10876059)
chr4 (184-230)||(38513256-38513303)
chr4 (189-247)||(3370300-3370358)
chr4 (201-247)||(19580839-19580885)
chr4 (140-247)||(20649449-20649557)
chr4 (189-247)||(24713013-24713071)
chr4 (148-247)||(40454964-40455064)
chr4 (148-247)||(40471202-40471302)
chr4 (174-247)||(55379648-55379722)
chr4 (153-247)||(10741210-10741305)
chr4 (153-247)||(10751784-10751879)
chr4 (153-247)||(10954979-10955074)
chr4 (153-247)||(10965553-10965648)
chr4 (198-247)||(17788739-17788788)
chr4 (153-247)||(19944942-19945037)
chr4 (174-230)||(22676238-22676295)
chr4 (153-247)||(36017885-36017980)
chr4 (153-247)||(36028438-36028533)
chr4 (153-247)||(49509527-49509622)
chr4 (153-247)||(49517684-49517779)
chr4 (185-241)||(5902225-5902281)
chr4 (199-247)||(11900555-11900603)
chr4 (152-230)||(16631759-16631835)
chr4 (183-247)||(19143619-19143683)
chr4 (184-247)||(22089634-22089698)
chr4 (183-247)||(25008476-25008540)
[»] scaffold0207 (1 HSPs)
scaffold0207 (19-247)||(19751-19980)
[»] chr1 (43 HSPs)
chr1 (19-247)||(17370230-17370458)
chr1 (19-247)||(22642049-22642280)
chr1 (19-247)||(23058783-23059011)
chr1 (116-247)||(26548921-26549052)
chr1 (19-247)||(19170990-19171217)
chr1 (141-247)||(22018642-22018748)
chr1 (158-247)||(21541132-21541221)
chr1 (46-240)||(19037223-19037417)
chr1 (122-247)||(45071257-45071382)
chr1 (19-110)||(22018544-22018635)
chr1 (19-242)||(52351282-52351503)
chr1 (148-247)||(5929028-5929127)
chr1 (148-247)||(674901-674999)
chr1 (154-247)||(34256180-34256275)
chr1 (86-247)||(20251060-20251221)
chr1 (19-247)||(28379178-28379410)
chr1 (148-242)||(41133277-41133370)
chr1 (148-247)||(12944664-12944762)
chr1 (148-247)||(14388783-14388881)
chr1 (174-247)||(23926406-23926479)
chr1 (148-247)||(18311628-18311726)
chr1 (122-242)||(46181513-46181633)
chr1 (148-247)||(22610632-22610731)
chr1 (148-247)||(11195723-11195820)
chr1 (122-247)||(20196346-20196471)
chr1 (174-247)||(22428001-22428075)
chr1 (184-244)||(30892447-30892508)
chr1 (199-247)||(8698263-8698311)
chr1 (184-247)||(12283775-12283839)
chr1 (174-247)||(21192527-21192602)
chr1 (19-78)||(26549051-26549110)
chr1 (184-234)||(28492957-28493008)
chr1 (148-247)||(5973212-5973312)
chr1 (153-247)||(154942-155037)
chr1 (186-230)||(1577222-1577267)
chr1 (153-247)||(2537994-2538089)
chr1 (198-247)||(12625216-12625265)
chr1 (198-247)||(17017959-17018008)
chr1 (153-224)||(19214933-19215006)
chr1 (184-247)||(10756777-10756841)
chr1 (195-247)||(16233786-16233838)
chr1 (198-242)||(20908779-20908823)
chr1 (184-247)||(22202397-22202461)
[»] chr2 (40 HSPs)
chr2 (19-247)||(23393355-23393584)
chr2 (19-247)||(24802236-24802465)
chr2 (122-247)||(22773830-22773954)
chr2 (122-242)||(24815208-24815329)
chr2 (122-247)||(17970898-17971023)
chr2 (148-242)||(24274527-24274620)
chr2 (163-239)||(38033445-38033520)
chr2 (122-247)||(19313622-19313747)
chr2 (148-247)||(19498595-19498696)
chr2 (122-247)||(36785429-36785553)
chr2 (163-247)||(20647244-20647327)
chr2 (163-239)||(38040604-38040679)
chr2 (148-247)||(968133-968231)
chr2 (148-247)||(1041650-1041748)
chr2 (19-98)||(24815316-24815395)
chr2 (86-247)||(22615137-22615298)
chr2 (19-110)||(20319437-20319530)
chr2 (161-247)||(21537873-21537958)
chr2 (122-247)||(22763125-22763250)
chr2 (147-247)||(19303056-19303156)
chr2 (174-234)||(25828501-25828562)
chr2 (198-247)||(40781840-40781889)
chr2 (184-247)||(18431625-18431689)
chr2 (184-247)||(24376455-24376519)
chr2 (184-234)||(10010452-10010503)
chr2 (176-234)||(22382826-22382885)
chr2 (188-247)||(28732530-28732589)
chr2 (174-242)||(20569442-20569512)
chr2 (153-247)||(2560993-2561088)
chr2 (153-247)||(10266498-10266593)
chr2 (153-247)||(10277075-10277170)
chr2 (153-247)||(11395802-11395897)
chr2 (153-247)||(11406118-11406213)
chr2 (153-247)||(21651134-21651229)
chr2 (153-247)||(22915492-22915587)
chr2 (153-247)||(43344912-43345007)
chr2 (153-247)||(43354527-43354622)
chr2 (184-247)||(18702089-18702153)
chr2 (183-247)||(24428214-24428278)
chr2 (183-247)||(30794345-30794409)
[»] scaffold0422 (1 HSPs)
scaffold0422 (19-247)||(10921-11149)
[»] chr8 (49 HSPs)
chr8 (19-247)||(40002406-40002636)
chr8 (19-247)||(28902649-28902878)
chr8 (19-230)||(21540144-21540355)
chr8 (24-230)||(45568676-45568882)
chr8 (20-230)||(21298165-21298375)
chr8 (19-247)||(21287584-21287813)
chr8 (61-247)||(29378831-29379017)
chr8 (148-247)||(20260262-20260360)
chr8 (148-247)||(21046892-21046990)
chr8 (122-233)||(17519813-17519924)
chr8 (163-247)||(22212009-22212092)
chr8 (148-247)||(3843060-3843158)
chr8 (46-247)||(8031264-8031465)
chr8 (148-247)||(22136506-22136605)
chr8 (148-247)||(22167671-22167770)
chr8 (140-247)||(23271827-23271934)
chr8 (148-247)||(7019064-7019163)
chr8 (163-247)||(15969537-15969620)
chr8 (122-247)||(23363639-23363764)
chr8 (183-247)||(19417924-19417988)
chr8 (183-247)||(19428499-19428563)
chr8 (189-247)||(24498811-24498869)
chr8 (19-100)||(19460439-19460519)
chr8 (19-100)||(19558117-19558197)
chr8 (153-247)||(20161874-20161969)
chr8 (153-247)||(20195527-20195622)
chr8 (184-247)||(12758477-12758541)
chr8 (184-247)||(15934402-15934466)
chr8 (187-247)||(19224511-19224571)
chr8 (184-247)||(20383078-20383142)
chr8 (183-247)||(23470104-23470168)
chr8 (19-97)||(17519912-17519990)
chr8 (174-247)||(19942572-19942646)
chr8 (153-247)||(9340685-9340780)
chr8 (153-247)||(9367829-9367924)
chr8 (161-234)||(18772018-18772089)
chr8 (153-247)||(19128290-19128385)
chr8 (184-232)||(19957093-19957142)
chr8 (153-247)||(44480632-44480727)
chr8 (153-247)||(44491248-44491343)
chr8 (184-247)||(18679160-18679224)
chr8 (184-247)||(18718349-18718413)
chr8 (183-247)||(18769781-18769845)
chr8 (152-234)||(20256266-20256346)
chr8 (153-247)||(25163388-25163481)
chr8 (184-247)||(26832422-26832486)
chr8 (183-247)||(30315344-30315408)
chr8 (183-247)||(40213812-40213876)
chr8 (183-230)||(43773465-43773513)
[»] scaffold0655 (1 HSPs)
scaffold0655 (19-247)||(4303-4534)
[»] chr5 (78 HSPs)
chr5 (19-230)||(25112618-25112829)
chr5 (19-230)||(25171709-25171920)
chr5 (19-247)||(20215839-20216067)
chr5 (19-247)||(40227844-40228072)
chr5 (102-241)||(23477646-23477784)
chr5 (47-247)||(40033461-40033661)
chr5 (140-230)||(32160055-32160145)
chr5 (123-247)||(23487843-23487966)
chr5 (19-247)||(1914632-1914860)
chr5 (148-247)||(20625497-20625595)
chr5 (148-247)||(106850-106948)
chr5 (19-110)||(32159967-32160058)
chr5 (122-247)||(13533271-13533396)
chr5 (148-247)||(20168770-20168869)
chr5 (148-247)||(21420194-21420292)
chr5 (157-230)||(11208749-11208823)
chr5 (122-247)||(13522514-13522639)
chr5 (122-247)||(36096355-36096480)
chr5 (122-247)||(36097812-36097937)
chr5 (19-97)||(23487775-23487854)
chr5 (174-247)||(22000750-22000824)
chr5 (122-247)||(35543831-35543957)
chr5 (198-247)||(21659578-21659627)
chr5 (173-247)||(26766558-26766633)
chr5 (174-247)||(7746417-7746491)
chr5 (174-247)||(20417633-20417706)
chr5 (184-246)||(21075907-21075970)
chr5 (175-247)||(13546244-13546317)
chr5 (153-247)||(17607789-17607884)
chr5 (153-247)||(17618404-17618499)
chr5 (153-247)||(31349263-31349358)
chr5 (153-247)||(31359877-31359972)
chr5 (174-230)||(31487578-31487635)
chr5 (152-230)||(17814285-17814361)
chr5 (184-247)||(21199723-21199787)
chr5 (184-230)||(31146343-31146390)
chr5 (188-247)||(34063350-34063409)
chr5 (185-242)||(26056215-26056273)
chr5 (140-247)||(30069326-30069434)
chr5 (140-247)||(34772639-34772747)
chr5 (140-247)||(34783584-34783692)
chr5 (198-247)||(90146-90195)
chr5 (153-247)||(1108580-1108675)
chr5 (153-247)||(1121338-1121433)
chr5 (174-230)||(6498653-6498710)
chr5 (153-247)||(9376897-9376992)
chr5 (153-247)||(14030774-14030869)
chr5 (153-247)||(14041327-14041422)
chr5 (153-247)||(15693467-15693562)
chr5 (153-247)||(15740698-15740793)
chr5 (153-247)||(15769858-15769953)
chr5 (153-247)||(17719647-17719742)
chr5 (153-247)||(17730299-17730394)
chr5 (153-247)||(22157834-22157929)
chr5 (153-247)||(24567819-24567914)
chr5 (153-247)||(24816321-24816416)
chr5 (153-247)||(24826909-24827004)
chr5 (186-234)||(25097562-25097611)
chr5 (186-234)||(25155532-25155581)
chr5 (153-247)||(27460891-27460986)
chr5 (153-247)||(27471290-27471385)
chr5 (163-247)||(31117208-31117293)
chr5 (174-247)||(32753403-32753476)
chr5 (153-247)||(36688424-36688519)
chr5 (153-247)||(36698990-36699085)
chr5 (183-247)||(8522571-8522635)
chr5 (187-247)||(19464701-19464761)
chr5 (187-247)||(19478731-19478791)
chr5 (183-247)||(20552545-20552609)
chr5 (183-247)||(20798425-20798489)
chr5 (183-247)||(23407175-23407239)
chr5 (19-67)||(23477602-23477650)
chr5 (183-247)||(24925604-24925668)
chr5 (183-247)||(24982885-24982949)
chr5 (198-242)||(26119274-26119318)
chr5 (183-247)||(36085190-36085254)
chr5 (183-247)||(36229468-36229532)
chr5 (183-247)||(42395713-42395777)
[»] scaffold1507 (1 HSPs)
scaffold1507 (19-247)||(42-273)
[»] scaffold0220 (1 HSPs)
scaffold0220 (19-224)||(2501-2706)
[»] scaffold0011 (1 HSPs)
scaffold0011 (19-230)||(165343-165554)
[»] scaffold0211 (1 HSPs)
scaffold0211 (19-230)||(188-399)
[»] chr7 (49 HSPs)
chr7 (19-247)||(11087745-11087973)
chr7 (116-230)||(4433300-4433414)
chr7 (116-230)||(4412728-4412842)
chr7 (122-247)||(15215801-15215925)
chr7 (122-247)||(18440680-18440804)
chr7 (155-247)||(3477031-3477122)
chr7 (19-247)||(13175306-13175533)
chr7 (122-247)||(17064220-17064344)
chr7 (122-247)||(38403903-38404027)
chr7 (148-247)||(6044973-6045071)
chr7 (148-244)||(13681832-13681927)
chr7 (148-247)||(48381697-48381795)
chr7 (122-247)||(8933048-8933173)
chr7 (46-247)||(8999636-8999837)
chr7 (174-247)||(12734855-12734928)
chr7 (174-247)||(26210239-26210312)
chr7 (174-247)||(29589524-29589597)
chr7 (174-247)||(4820826-4820900)
chr7 (122-247)||(24883085-24883210)
chr7 (198-247)||(19711755-19711804)
chr7 (174-242)||(33604246-33604315)
chr7 (184-247)||(11792259-11792323)
chr7 (173-247)||(13302199-13302274)
chr7 (197-247)||(18418673-18418723)
chr7 (197-247)||(19237779-19237829)
chr7 (183-244)||(12468624-12468685)
chr7 (184-244)||(29936092-29936153)
chr7 (153-247)||(44280039-44280134)
chr7 (183-247)||(9159277-9159341)
chr7 (184-247)||(16310651-16310715)
chr7 (184-247)||(21211288-21211352)
chr7 (46-133)||(1559863-1559950)
chr7 (184-234)||(39285260-39285311)
chr7 (173-242)||(3779384-3779451)
chr7 (174-247)||(14187028-14187102)
chr7 (140-247)||(19986210-19986318)
chr7 (189-247)||(25212540-25212598)
chr7 (153-247)||(3165250-3165345)
chr7 (201-242)||(7488652-7488693)
chr7 (183-247)||(9169732-9169796)
chr7 (185-234)||(16105686-16105735)
chr7 (153-247)||(20490522-20490617)
chr7 (153-247)||(21003698-21003793)
chr7 (184-247)||(44466443-44466508)
chr7 (183-247)||(588759-588823)
chr7 (184-247)||(5001570-5001634)
chr7 (198-246)||(15871782-15871830)
chr7 (183-247)||(15889018-15889082)
chr7 (152-222)||(24787681-24787749)
[»] scaffold0017 (3 HSPs)
scaffold0017 (19-239)||(59558-59775)
scaffold0017 (19-247)||(41006-41231)
scaffold0017 (122-247)||(174862-174986)
[»] scaffold0010 (1 HSPs)
scaffold0010 (19-247)||(60920-61148)
[»] scaffold0132 (1 HSPs)
scaffold0132 (19-230)||(38796-39008)
[»] scaffold1820 (2 HSPs)
scaffold1820 (20-230)||(1024-1234)
scaffold1820 (83-136)||(912-965)
[»] scaffold0050 (2 HSPs)
scaffold0050 (122-234)||(34911-35022)
scaffold0050 (19-84)||(34842-34907)
[»] scaffold1321 (2 HSPs)
scaffold1321 (19-126)||(1727-1834)
scaffold1321 (163-247)||(1629-1713)
[»] scaffold1263 (2 HSPs)
scaffold1263 (19-126)||(1920-2027)
scaffold1263 (163-247)||(1822-1906)
[»] scaffold0771 (1 HSPs)
scaffold0771 (154-247)||(5727-5820)
[»] scaffold0018 (2 HSPs)
scaffold0018 (122-242)||(7182-7303)
scaffold0018 (19-98)||(7290-7369)
[»] scaffold0084 (4 HSPs)
scaffold0084 (154-230)||(1099-1175)
scaffold0084 (148-247)||(57434-57533)
scaffold0084 (19-92)||(1178-1251)
scaffold0084 (174-230)||(31930-31987)
[»] scaffold0570 (3 HSPs)
scaffold0570 (122-239)||(2374-2491)
scaffold0570 (121-247)||(141-267)
scaffold0570 (19-97)||(2479-2557)
[»] scaffold0297 (1 HSPs)
scaffold0297 (123-247)||(9261-9386)
[»] scaffold0154 (1 HSPs)
scaffold0154 (148-247)||(35043-35141)
[»] scaffold0443 (1 HSPs)
scaffold0443 (46-247)||(1665-1866)
[»] scaffold0005 (1 HSPs)
scaffold0005 (19-247)||(60440-60671)
[»] scaffold0002 (2 HSPs)
scaffold0002 (86-247)||(475945-476106)
scaffold0002 (86-247)||(482465-482626)
[»] scaffold0407 (1 HSPs)
scaffold0407 (122-247)||(12768-12892)
[»] scaffold0185 (1 HSPs)
scaffold0185 (86-242)||(32246-32403)
[»] scaffold0142 (1 HSPs)
scaffold0142 (148-247)||(40009-40107)
[»] scaffold0042 (1 HSPs)
scaffold0042 (148-247)||(4804-4902)
[»] scaffold0001 (1 HSPs)
scaffold0001 (153-247)||(29422-29516)
[»] scaffold0752 (1 HSPs)
scaffold0752 (122-247)||(709-836)
[»] scaffold0544 (1 HSPs)
scaffold0544 (148-247)||(10415-10514)
[»] scaffold0382 (1 HSPs)
scaffold0382 (122-247)||(1940-2065)
[»] scaffold0012 (2 HSPs)
scaffold0012 (122-247)||(127122-127248)
scaffold0012 (174-247)||(16134-16207)
[»] scaffold0410 (1 HSPs)
scaffold0410 (174-247)||(15260-15333)
[»] scaffold0090 (2 HSPs)
scaffold0090 (122-233)||(152-263)
scaffold0090 (122-233)||(4532-4643)
[»] scaffold0738 (1 HSPs)
scaffold0738 (153-247)||(5454-5548)
[»] scaffold0163 (2 HSPs)
scaffold0163 (148-247)||(28976-29076)
scaffold0163 (174-230)||(25804-25861)
[»] scaffold0073 (1 HSPs)
scaffold0073 (122-247)||(57842-57967)
[»] scaffold0149 (1 HSPs)
scaffold0149 (141-247)||(38621-38727)
[»] scaffold0022 (2 HSPs)
scaffold0022 (159-247)||(36759-36848)
scaffold0022 (159-247)||(134819-134908)
[»] scaffold0161 (2 HSPs)
scaffold0161 (153-247)||(10800-10893)
scaffold0161 (153-247)||(15464-15557)
[»] scaffold0146 (1 HSPs)
scaffold0146 (184-247)||(14472-14536)
[»] scaffold0035 (1 HSPs)
scaffold0035 (161-247)||(20162-20245)
[»] scaffold0547 (1 HSPs)
scaffold0547 (153-247)||(255-349)
[»] scaffold0327 (1 HSPs)
scaffold0327 (184-242)||(7173-7232)
[»] scaffold0567 (1 HSPs)
scaffold0567 (174-247)||(9250-9324)
[»] scaffold0349 (1 HSPs)
scaffold0349 (143-241)||(10258-10355)
[»] scaffold1409 (1 HSPs)
scaffold1409 (153-247)||(1723-1818)
[»] scaffold0739 (1 HSPs)
scaffold0739 (198-247)||(1551-1600)
[»] scaffold0497 (1 HSPs)
scaffold0497 (198-247)||(10938-10987)
[»] scaffold0322 (1 HSPs)
scaffold0322 (183-247)||(7533-7597)
[»] scaffold0004 (1 HSPs)
scaffold0004 (184-247)||(244973-245037)
[»] scaffold0337 (1 HSPs)
scaffold0337 (152-247)||(14291-14385)
[»] scaffold0269 (1 HSPs)
scaffold0269 (201-247)||(16338-16384)
[»] scaffold0193 (1 HSPs)
scaffold0193 (197-247)||(16821-16871)
[»] scaffold0065 (1 HSPs)
scaffold0065 (152-247)||(1333-1427)
[»] scaffold0038 (1 HSPs)
scaffold0038 (140-247)||(52382-52490)
[»] scaffold0171 (1 HSPs)
scaffold0171 (174-230)||(28137-28194)
[»] scaffold0120 (1 HSPs)
scaffold0120 (184-248)||(37437-37502)
[»] scaffold0078 (1 HSPs)
scaffold0078 (198-247)||(32478-32527)
[»] scaffold0028 (3 HSPs)
scaffold0028 (153-247)||(14095-14190)
scaffold0028 (153-247)||(54772-54867)
scaffold0028 (198-234)||(80765-80801)
[»] scaffold0014 (1 HSPs)
scaffold0014 (153-247)||(61166-61261)
[»] scaffold0009 (1 HSPs)
scaffold0009 (197-234)||(268151-268188)
[»] scaffold1200 (1 HSPs)
scaffold1200 (187-247)||(66-126)
[»] scaffold0627 (1 HSPs)
scaffold0627 (187-247)||(8718-8778)
[»] scaffold0414 (1 HSPs)
scaffold0414 (183-247)||(1431-1495)
[»] scaffold0251 (1 HSPs)
scaffold0251 (183-247)||(21361-21425)
[»] scaffold0072 (1 HSPs)
scaffold0072 (183-247)||(37383-37447)
[»] scaffold0026 (1 HSPs)
scaffold0026 (198-234)||(59449-59485)


Alignment Details
Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 76)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 20634911 - 20635139
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| || |||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||  ||||||    
T  20634911 gaattgtgttttctttttctcaagataaattcttcttctgagatcacttcagaagctgtttgaaaacgcttctgatgtgatgacacttcagaagcaattg 20635010  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20635011 acttgcttctgatgtgcagttcagaataggataagcagcggaataaaacagagtaagagagaagaaagaaagacacaggcaattatactggttccttcca 20635110  T
Q  219 caaaccagaagtagtctagtcccctttgc 247  Q
    |||||| ||||||||| ||||||| ||||    
T  20635111 caaaccggaagtagtccagtcccccttgc 20635139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 22385994 - 22386222
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    |||||| |||||| |||||||||||| || |||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  22385994 gaattgagttttctttttctcaagataaattcttcttctgagatcacttcagaagctgtttgaaaacgcttctgatgtgatgacacttcagaggcaattg 22386093  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    |||||||||||||||||| | |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  22386094 acttgcttctgatgtgcagttcagaataggataagcagcggagtaaaacagagtaagagaaaagaaagaaagacacaggcaattatactggtttcttcca 22386193  T
Q  219 caaaccagaagtagtctagtcccctttgc 247  Q
    |||||| ||||||||| ||||||| ||||    
T  22386194 caaaccggaagtagtccagtcccccttgc 22386222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 17609265 - 17609045
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaa-cgcttctgatgtgatgacacttcagagacaatt 117  Q
    ||||||||||||| |||||||||||| ||||||| |||| ||||||||| ||||| ||||| |||| | ||||||||||||| ||||||||||  |||||    
T  17609265 gaattgtgttttctttttctcaagataaaatcttcttctgagatcacttcagaagctgtttaaaaaacacttctgatgtgattacacttcagatgcaatt 17609166  T
Q  118 gacttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    ||||||||||||||||||| | |||||||||||| |||||||| |||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||    
T  17609165 gacttgcttctgatgtgcagttcagaattggatatgcagcggagtaaaacagag-aagagagaagaaagagagacacaagcaattatactggttccttcc 17609067  T
Q  218 acaaaccagaagtagtctagtc 239  Q
    ||||||| ||||||||| ||||    
T  17609066 acaaaccggaagtagtccagtc 17609045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 7587114 - 7586887
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| ||||||||| |  |||| || |||| | ||||||| ||||||||||||| |  |||||||||||||| | ||||||||  |||||     
T  7587114 gaattgtgttttctttttctcaaaaa-aaatattcttctgatatcacttcagaagttgtttgagagtgcttctgatgtgataatacttcagatgcaatta 7587016  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | |||||||||||||    |  ||||| ||||| |||||||| ||||| ||||||| |||| |||||||| |||||||  ||||||||||||||||||||    
T  7587015 aattgcttctgatgtattgtttagaatcggatacgcagcggagtaaaaacagagta-gagaaaagaaagagagacacaagcaattatactggttccttcc 7586917  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||||| ||||||| ||||    
T  7586916 acaaaccggaagtagtccagtcccccttgc 7586887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 123 - 247
Target Start/End: Complemental strand, 12953849 - 12953726
Alignment:
Q  123 gcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaa 222  Q
    ||||||||||||   | |||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||| |||||||| |||||||||||||||||    
T  12953849 gcttctgatgtgatgttcagaattggatatgcagcggaataaaacagagta-gagaaaagaaagagagacacaaacaattatcctggttccttccacaaa 12953751  T
Q  223 ccagaagtagtctagtcccctttgc 247  Q
    || ||||||||| ||||||| ||||    
T  12953750 ccggaagtagtccagtcccccttgc 12953726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 11205421 - 11205545
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||  |||| ||||||||||||||||||||| |||| |||||||| |||||||  ||||||||||||||||||||||||    
T  11205421 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaacagagta-gagaaaagaaagagagacacaagcaattatactggttccttccacaa 11205519  T
Q  222 accagaagtagtctagtcccctttgc 247  Q
    ||||||||||||| | ||||| ||||    
T  11205520 accagaagtagtccattcccccttgc 11205545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 25678891 - 25678984
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||  ||||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  25678891 gcagcagaataaaacagagta-gagagaagaaagagagacacacgcaattatcctggttccttccacaaaccagaagtagtccagtcccccttgc 25678984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 242
Target Start/End: Original strand, 21119027 - 21119222
Alignment:
Q  46 aaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaat 145  Q
    ||||||| |||| | ||||||| ||||||||||||| |  |||||||||||||| | ||||||||  ||||| | |||||| ||||||    | ||||||    
T  21119027 aaatcttcttctgatatcacttcagaagttgtttgagagtgcttctgatgtgataatacttcagatgcaattaaattgcttatgatgtattgttcagaat 21119126  T
Q  146 tggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
     ||||| |||||||| ||||| |||||  ||||| |||||||| |||||||  ||||||||||||||||||||||| ||  ||||||||  |||||||    
T  21119127 cggatacgcagcggagtaaaaacagag--agagaaaagaaagagagacacaagcaattatactggttccttccacatactggaagtagttcagtcccc 21119222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 11234944 - 11235068
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||  |||| ||||||||||||||||||||| |||| |||||||| |||||||  ||||||||||| ||||||||||||    
T  11234944 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaacagagta-gagaaaagaaagagagacacaagcaattatactgattccttccacaa 11235042  T
Q  222 accagaagtagtctagtcccctttgc 247  Q
    ||| ||||||||| | ||||| ||||    
T  11235043 accggaagtagtccattcccccttgc 11235068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 242
Target Start/End: Complemental strand, 19453415 - 19453259
Alignment:
Q  86 gcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaa 184  Q
    |||| ||||||||| | ||||||||   |||| | ||||||||||||||   | |||||| ||||| |||||||| ||||| ||||||| |||| |||||    
T  19453415 gcttgtgatgtgataatacttcagatgtaattaaattgcttctgatgtgttgttcagaatcggatacgcagcggagtaaaaacagagta-gagaaaagaa 19453317  T
Q  185 agaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
    ||| |||||||  ||||||||| ||||||||||||||||| ||||||||| |||||||    
T  19453316 agagagacacaagcaattataccggttccttccacaaaccggaagtagtccagtcccc 19453259  T

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Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 18554745 - 18554870
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||||||| ||||||| |||| |||||||| |||||||  ||||||| |||||||||||||||    
T  18554745 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaaacagagta-gagaaaagaaagagagacacaagcaattatcctggttccttccaca 18554843  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||| ||||||| ||||    
T  18554844 aaccggaagtagtccagtcccccttgc 18554870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 21127423 - 21127649
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||  ||  ||||||| |||| | ||||||||||||| ||||||| |  ||||||||||| || | | ||||||  |||||     
T  21127423 gaattgtgttttctttttctct-gaaaaaatcttcttctgatatcactttagaagctgtttgagagtgcttctgatgttataatagttcagatgcaatta 21127521  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | |||||| ||||||    | ||||||  || | |||||||| ||||| |||||  ||||| |||||||| ||||| |  ||||||||||||||||||||    
T  21127522 aattgcttttgatgtattgttcagaatcagacacgcagcggagtaaaaacagag--agagaaaagaaagagagacataagcaattatactggttccttcc 21127619  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||||| ||||||| ||||    
T  21127620 acaaaccggaagtagtccagtcccccttgc 21127649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 247
Target Start/End: Original strand, 25518058 - 25518259
Alignment:
Q  46 aaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaat 145  Q
    ||||||| |||| | ||||||| ||||| |||| || |  |||||||||| ||| | ||||||||  ||||| | |||||||||||||    | ||||||    
T  25518058 aaatcttcttctgatatcacttcagaagctgttggagattgcttctgatgagataatacttcagatgcaattaaattgcttctgatgtattgttcagaat 25518157  T
Q  146 tggataagcagcggaataa-aacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctt 244  Q
    | |||| |||||||| ||| ||||||||| | || |||||||| ||||||| | | ||||||||||||||||||||| || ||||||||| ||||||| |    
T  25518158 tagatacgcagcggagtaataacagagtagg-gaaaagaaagagagacacaaatagttatactggttccttccacaacccggaagtagtccagtccccct 25518256  T
Q  245 tgc 247  Q
    |||    
T  25518257 tgc 25518259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 25687467 - 25687374
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||||| |||||| ||||||||||||| |||||||  ||||||| ||||||| ||||||||||| ||||||||| ||||||| ||||    
T  25687467 gcagcggaataaaaaagagta-gagagaagaaagagagacacaagcaattatcctggttctttccacaaaccggaagtagtccagtcccccttgc 25687374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 22292369 - 22292467
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| |||||||||||||||| || ||||||||| ||||||| ||||    
T  22292369 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaatccggaagtagtccagtcccccttgc 22292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 27167161 - 27167063
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| |||||||||||||| |||||| |||| |||| |||||||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  27167161 gatatgcagcggaataaaatagagta-gagaaaagagagaaagacacaagcaattatcctggttccttccacaaatcggaagtagtccagtcccccttgc 27167063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 31930898 - 31931023
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||| |||| |||||||||||||| || |||| |||| |||||||| |||||||  ||||||| |||||||||||||||    
T  31930898 tgcttctgatgtgatgttcagaattagatatgcagcggaataaaaacaaagta-gagaaaagaaagagagacacaagcaattatcctggttccttccaca 31930996  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    || | ||||||||| ||||||| ||||    
T  31930997 aatcggaagtagtccagtcccccttgc 31931023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 18835378 - 18835254
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||  |||| |||||||||||||| |||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||    
T  18835378 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaatagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaa 18835280  T
Q  222 accagaagtagtctagtcccctttgc 247  Q
    | | ||||||||| ||||||| ||||    
T  18835279 atcggaagtagtccagtcccccttgc 18835254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 14052198 - 14052130
Alignment:
Q  163 aaaacagagtaagagagaagaaagaaagacacagacaa-ttatactggttccttccacaaaccagaagt 230  Q
    |||||||||||||||||||  ||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  14052198 aaaacagagtaagagagaaagaagaaagacacagacaatttatacaggttccttccacaaaccggaagt 14052130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 18826957 - 18826859
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||| ||| | ||||||||| ||||||| ||||    
T  18826957 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccataaatcggaagtagtccagtcccccttgc 18826859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 22308264 - 22308362
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| |||||||||||||||| ||  |||||||| ||||||| ||||    
T  22308264 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaatccgtaagtagtccagtcccccttgc 22308362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 242
Target Start/End: Complemental strand, 9934359 - 9934239
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaat-aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||| ||||||||  | |||| |||||||| |||||||  ||||||| |||||||||||||||    
T  9934359 tgcttctgatgtgatgttcagaatcagatatgcagcggaatgaaaacagaaca-gagaaaagaaagagagacacaagcaattatcctggttccttccaca 9934261  T
Q  221 aaccagaagtagtctagtcccc 242  Q
    |||| ||||||||| |||||||    
T  9934260 aaccggaagtagtccagtcccc 9934239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 14070888 - 14070803
Alignment:
Q  164 aaacagagtaagagagaagaaagaaagacacagacaa-ttatactggttccttccacaaaccagaagt-agtctagtcccctttgc 247  Q
    ||||||||||||||||||  ||||||||||||| ||| |||||| ||||||||||||||||| ||||| ||||| |||||| ||||    
T  14070888 aaacagagtaagagagaaagaagaaagacacaggcaatttatacaggttccttccacaaaccggaagtcagtcttgtcccccttgc 14070803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 17047052 - 17047159
Alignment:
Q  140 cagaattggataagcagcggaataa-aacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagt 238  Q
    ||||||| |||| |||||||||||| ||||||| | |||| |||||||| |||||||  || |||| |||||||||||||||| || ||||||||| |||    
T  17047052 cagaattagatatgcagcggaataagaacagagca-gagaaaagaaagagagacacaagcagttatcctggttccttccacaatccggaagtagtccagt 17047150  T
Q  239 cccctttgc 247  Q
    |||| ||||    
T  17047151 cccccttgc 17047159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 15301540 - 15301618
Alignment:
Q  152 agcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtag 232  Q
    ||||||||| ||||||||||  ||||||||  |||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  15301540 agcagcgga-taaaacagag--agagagaaagaagaaagacacaaaacaattatacaggttccttccacaaaccagaagtag 15301618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 17742451 - 17742326
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaat-aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||| ||||||||  | |||| |||||||| |||||||  ||||||| || ||||||||||||    
T  17742451 tgcttctgatgtgatgttcagaatcagatatgcagcggaatgaaaacagaaca-gagaaaagaaagagagacacaagcaattatcctagttccttccaca 17742353  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||| ||||||| ||||    
T  17742352 aaccggaagtagtccagtcccccttgc 17742326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 19623323 - 19623397
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||||||| |||||| ||||    
T  19623323 agagagaaagaagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgc 19623397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 17063696 - 17063792
Alignment:
Q  140 cagaattggataagcagcggaataa-aacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtcta 236  Q
    ||||||| |||| |||||||||||| ||||||| | |||| |||||||| |||||||  || |||| |||||||||||||||| || |||||||||||    
T  17063696 cagaattagatatgcagcggaataagaacagagca-gagaaaagaaagagagacacaagcagttatcctggttccttccacaatccggaagtagtcta 17063792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 27720840 - 27720937
Alignment:
Q  143 aattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtccc 241  Q
    |||| |||| ||||||||| | ||||||| | |||| |||||||| ||||| | ||| ||||||||||||||||||||| || ||||||| | ||||||    
T  27720840 aattagatatgcagcggaaaagaacagagca-gagaaaagaaagatagacagaaacagttatactggttccttccacaatccggaagtagcccagtccc 27720937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 27505410 - 27505513
Alignment:
Q  140 cagaattggataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctag 237  Q
    |||||||||||| ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||  | ||||||||| ||    
T  27505410 cagaattggatatgcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaacacggaagtagtccag 27505508  T
Q  238 tcccc 242  Q
    |||||    
T  27505509 tcccc 27505513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 29917396 - 29917445
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||  |||||||||||||||| ||||||||||||||||| ||||    
T  29917396 caattatacaagttccttccacaaaccggaagtagtctagtccccgttgc 29917445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 3680467 - 3680531
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  3680467 aagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcctgtcccccttgc 3680531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 25787214 - 25787278
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| |||||||| ||| |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  25787214 aaagcaagacacaaacagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 25787278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 31571891 - 31571990
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaa-gaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    |||| ||||||||||||||||||| | |||| |||||| |  |||||||  ||||||| ||||||||||||||||| | ||||||||  ||||||| |||    
T  31571891 gatatgcagcggaataaaacagagca-gagaaaagaaaagcgagacacaagcaattatcctggttccttccacaaatcggaagtagttcagtcccccttg 31571989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 24719527 - 24719464
Alignment:
Q  185 agaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||||| | ||||||||| |||||||||||||| ||||||||||||  |||||| ||||    
T  24719527 agaaagacacaaagcaattatacaggttccttccacaatccagaagtagtcctgtcccccttgc 24719464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 29765045 - 29765104
Alignment:
Q  181 agaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcc 240  Q
    ||||||| |||||||  ||||||| ||||||||||||||||| | ||||||||| |||||    
T  29765045 agaaagagagacacaagcaattatcctggttccttccacaaatcggaagtagtccagtcc 29765104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 12347460 - 12347510
Alignment:
Q  197 acaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  12347460 acaattatacaggttccttccacaaaccggaagtagtcctgtccccattgc 12347510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 13601497 - 13601567
Alignment:
Q  161 ataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt 230  Q
    |||||||||||  ||||| ||  |||||||||||| | ||||||||| ||||||||||||||||| |||||    
T  13601497 ataaaacagagagagagaaaaagaagaaagacacaaagcaattatacaggttccttccacaaaccggaagt 13601567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 14101243 - 14101169
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||||||| | | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  14101243 agagagaaagaagaaagacataaatcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 14101169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 17746463 - 17746405
Alignment:
Q  189 agacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  17746463 agacacaagcaattatcctggttccttccacaaatcggaagtagtccagtcccccttgc 17746405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 21624414 - 21624492
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt 230  Q
    |||||||| ||||| ||||  ||||||||  |||||||||||| | |||||||||  |||||||||||||||| |||||    
T  21624414 gcagcggattaaaatagagagagagagaaagaagaaagacacaaagcaattatacaagttccttccacaaaccggaagt 21624492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 24116195 - 24116245
Alignment:
Q  197 acaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||| |||||||||||||||||||||||||||  |||||| ||||    
T  24116195 acaagtatacaggttccttccacaaaccagaagtagtcctgtcccccttgc 24116245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 25591966 - 25592040
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||||||||| | ||||||||| |||||||||||||| ||  ||||||||| |||||| ||||    
T  25591966 agagagaaagaagaaagacacatagcaattatacaggttccttccacaatccgaaagtagtcttgtcccccttgc 25592040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 25593393 - 25593463
Alignment:
Q  152 agcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaacc 224  Q
    ||||||||| ||||||||||  ||||||||  |||||||||||| | ||||||||| |||||||||||||||||    
T  25593393 agcagcgga-taaaacagag--agagagaaagaagaaagacacaaagcaattatacaggttccttccacaaacc 25593463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 28252290 - 28252182
Alignment:
Q  140 cagaattggataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctag 237  Q
    ||||||| |||  ||||||||| | ||||||||| |||| ||||||||  ||||||||  || |||| ||||||||||||||||  | ||||||||| ||    
T  28252290 cagaattagatgtgcagcggaaaagaacagagta-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaacacggaagtagtccag 28252192  T
Q  238 tcccctttgc 247  Q
    ||||| ||||    
T  28252191 tcccccttgc 28252182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 28357437 - 28357329
Alignment:
Q  140 cagaattggataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctag 237  Q
    ||||||| |||  ||||||||| | ||||||||| |||| ||||||||  ||||||||  || |||| ||||||||||||||||  | ||||||||| ||    
T  28357437 cagaattagatgtgcagcggaaaagaacagagta-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaacacggaagtagtccag 28357339  T
Q  238 tcccctttgc 247  Q
    ||||| ||||    
T  28357338 tcccccttgc 28357329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 4630351 - 4630446
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaag--aaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| |||||||  |||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  4630351 gcagcggaaaagaacagagca-gagaaaagaaagtcaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 4630446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 12417071 - 12416976
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  12417071 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 12416976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 14923968 - 14923919
Alignment:
Q  185 agaaagacacagacaattatactggttccttccacaaaccagaagtagtc 234  Q
    ||||||||||| ||||||||||  ||||||||||||| || |||||||||    
T  14923968 agaaagacacaaacaattatacatgttccttccacaatccggaagtagtc 14923919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 15478544 - 15478479
Alignment:
Q  180 aagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctt 244  Q
    |||| ||||||||||| | |||||||  ||||||||||||||| || ||||||||| |||||||||    
T  15478544 aagagagaaagacacaaaacaattatcttggttccttccacaatccggaagtagtccagtcccctt 15478479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 15551395 - 15551444
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| |||||||||||||||| || ||||||||| ||||||| ||||    
T  15551395 caattatcctggttccttccacaatccggaagtagtccagtcccccttgc 15551444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 16876247 - 16876320
Alignment:
Q  174 agagagaagaaagaaagacacaga-caatt-atactggttccttccacaaaccagaagt-agtctagtcccctt 244  Q
    ||||||||| |||||||||||| | ||||| |||| ||||||||||||||||| ||||| ||||| ||||||||    
T  16876247 agagagaaggaagaaagacacaaagcaatttatacaggttccttccacaaaccggaagtcagtcttgtcccctt 16876320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 16929931 - 16930026
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  16929931 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 16930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 16959102 - 16959197
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  16959102 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 16959197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 19470011 - 19470072
Alignment:
Q  174 agagagaagaaagaaagacacagacaa-ttatactggttccttccacaaaccagaagtagtc 234  Q
    |||||||| ||||||||||||| | || ||||||  |||||||||||||||| |||||||||    
T  19470011 agagagaaaaaagaaagacacaaaaaaattatacaagttccttccacaaaccggaagtagtc 19470072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 23296140 - 23296201
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctt 244  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||| ||| || |||||    
T  23296140 aagaaagacacaaagcaattatacaggttccttccacaaaccggaagtattcttgttccctt 23296201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 26024939 - 26025034
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  26024939 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 26025034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 26035513 - 26035608
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  26035513 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 26035608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 27341174 - 27341269
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  27341174 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 27341269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 27372300 - 27372403
Alignment:
Q  140 cagaattggataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctag 237  Q
    |||||||||||| ||||||||| | ||||||| | |||| ||||||||  ||||||||   | |||| ||||||||||||||||  | ||||||||| ||    
T  27372300 cagaattggatatgcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagtagttatcctggttccttccacaacacggaagtagtccag 27372398  T
Q  238 tcccc 242  Q
    |||||    
T  27372399 tcccc 27372403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 27401914 - 27402009
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  27401914 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 27402009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 27412573 - 27412668
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  27412573 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 27412668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 27462650 - 27462753
Alignment:
Q  140 cagaattggataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctag 237  Q
    |||||||||||| ||||||||| | ||||||| | |||| ||||||||  ||||||||   | |||| ||||||||||||||||  | ||||||||| ||    
T  27462650 cagaattggatatgcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagtagttatcctggttccttccacaacacggaagtagtccag 27462748  T
Q  238 tcccc 242  Q
    |||||    
T  27462749 tcccc 27462753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 27819180 - 27819085
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  27819180 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 27819085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 29384232 - 29384327
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  29384232 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 29384327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 32301759 - 32301664
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  32301759 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 32301664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 32312448 - 32312353
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  32312448 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 32312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 7376443 - 7376379
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  7376443 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 7376379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 10404223 - 10404159
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  10404223 aaagcaagacacaagcagttatcctggttccttccacaaaacggaagtagtccagtcccccttgc 10404159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 12827204 - 12827268
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  12827204 aaagcaagacacaagcagttatcctggttccttccacaaaacggaagtagtccagtcccccttgc 12827268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 19290055 - 19289957
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaat--aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccac 219  Q
    |||||||||||||   | |||||| ||||| ||||||||||  |||||||||| ||||| |||||| | |||||||  |||||||  |||||||||||||    
T  19290055 tgcttctgatgtgatgttcagaatcggatacgcagcggaataaaaaacagagt-agagaaaagaaacagagacacaagcaattatcatggttccttccac 19289957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 20030588 - 20030524
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  20030588 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 20030524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 20063339 - 20063275
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  20063339 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 20063275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 20113432 - 20113368
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| |||| |||||||||||| |||||||||  |||||| ||||    
T  20113432 aagaaagacacaaagcaattatacaggttacttccacaaaccggaagtagtcctgtcccccttgc 20113368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 24729322 - 24729250
Alignment:
Q  176 agagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| || ||||||||||| | |||||||||  ||||||||||||| || |||||||||| |||||| ||||    
T  24729322 agagaggagagaaagacacaaaacaattatacaagttccttccacaatccggaagtagtcttgtcccccttgc 24729250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 26043728 - 26043788
Alignment:
Q  187 aaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||  ||||||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  26043728 aaagacacaagcaattatcctggttccttccacaacacggaagtagtccagtcccccttgc 26043788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 21295 - 21067
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| || |||| |||| ||||||||| ||||| | ||||||||||||||||||||||||||||||||||| ||||||    
T  21295 gaattgtgttttctttttctcaagataaattcttcttctgagatcacttcagaagctatttgaaaacgcttctgatgtgatgacacttcagaggcaattg 21196  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    |||||||||||||||||| | |||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21195 acttgcttctgatgtgcagttcagaataggataagcagcggagtaaaacagagtaagagagaagaaagaaagacacatacaattatactggttccttcca 21096  T
Q  219 caaaccagaagtagtctagtcccctttgc 247  Q
    |||||| ||||||||| ||||||| ||||    
T  21095 caaaccggaagtagtccagtcccccttgc 21067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 3e-81; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 15832597 - 15832825
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| || |||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  15832597 gaattgtgttttctttttctcaagataaattcttcttctgagatcacttcagaagctgtttgaaaacgcttctgatgtgatgacacttcagaggcaattg 15832696  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    |||||||||||||||||| | |||||||| | | |||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15832697 acttgcttctgatgtgcagttcagaattgaaaatgcagcggagtaaagcagagtaagagagaagaaagaaagacacaggcaattatactggttccttcca 15832796  T
Q  219 caaaccagaagtagtctagtcccctttgc 247  Q
    |||||| ||||||||| ||||||| ||||    
T  15832797 caaaccggaagtagtccagtcccccttgc 15832825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 15848331 - 15848559
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| || |||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  15848331 gaattgtgttttctttttctcaagataaattcttcttctgagatcactttagaagctgttttaaaacgcttctgatgtgatgacacttcagaggcaattg 15848430  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    |||||| ||||||||||| | |||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15848431 acttgcctctgatgtgcagttcagaattggaaatgcagcggagtaaagcagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 15848530  T
Q  219 caaaccagaagtagtctagtcccctttgc 247  Q
    |||| | ||||||||| ||||||| ||||    
T  15848531 caaatcggaagtagtccagtcccccttgc 15848559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 22150435 - 22150663
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| ||||||| |||| ||||||||| ||||| ||||||| || |||||||||||||| ||||||||||  ||||||    
T  22150435 gaattgtgttttctttttctcaagataaaatcttcttctgagatcacttcagaagctgtttgagaatgcttctgatgtgataacacttcagatgcaattg 22150534  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaat-aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | |||||||||||||||| | |||||||||||| |||||||| | |||||||||| |||||||||||||| |||||||  |||||||||||||||||| |    
T  22150535 atttgcttctgatgtgcagttcagaattggatacgcagcggagtaaaaacagagt-agagagaagaaagagagacacatgcaattatactggttcctttc 22150633  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||||| ||||||| ||||    
T  22150634 acaaaccggaagtagtccagtcccccttgc 22150663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 13147482 - 13147710
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| ||||||||| |  ||||||| |||| ||||||||| | ||| ||||| | || |||||||||||||| |||||||| |  ||||||    
T  13147482 gaattgtgttttctttttctcaaaaa-aaatcttcttctgagatcacttcaaaagctgtttaagaatgcttctgatgtgataacacttcatatgcaattg 13147580  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    |||||||||||||||||||| || ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  13147581 acttgcttctgatgtgcaattcataattggatacgcagcggagtaaaaacagagtaagagagaagaaagaaagacacatgcaattatactggttccttcc 13147680  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||||| ||||||| ||||    
T  13147681 acaaaccggaagtagtccagtcccccttgc 13147710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 102 - 247
Target Start/End: Original strand, 49989533 - 49989678
Alignment:
Q  102 cacttcagagacaattgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaat 201  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49989533 cacttcagaggcaattgacttgcttctgatgtgcagttcagaattggatatgcagcggagtaaaacagagtaagagagaagaaagaaagacacagacaat 49989632  T
Q  202 tatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  49989633 tatactggttccttccacaaaccggaagtagtccagtcccccttgc 49989678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 11910012 - 11909807
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| ||||| |||||| ||||||| |||| || |||||| ||||| ||||  ||||||||||||||||||||||||||||||| || |||    
T  11910012 gaattgtgttttctttttcccaagataaaatcttcttctgaggtcacttcagaagctgttgaaaaacgcttctgatgtgatgacacttcagaggcagttg 11909913  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    |||||| ||||||||||| | |||||||||||   || | || ||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  11909912 acttgcatctgatgtgcagttcagaattggatgcacaacagagtaaaatagagtaagagagaagaaagaaatacacaggcaattatactggttccttcca 11909813  T
Q  219 caaacc 224  Q
    ||||||    
T  11909812 caaacc 11909807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 12753593 - 12753382
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||| ||||||| |||||||||||| ||||||| |||| || |||||| ||||  ||||  ||||||||||||||||||||||||||||||| || |||    
T  12753593 gaattatgttttctttttctcaagataaaatcttcttctgaggtcacttcagaaactgttgaaaaacgcttctgatgtgatgacacttcagaggcagttg 12753494  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    ||||||||||||||| || | |||||  ||||   || |||| |||||||||||||||||||||||||||||||||||  |||||||| |||||||||||    
T  12753493 acttgcttctgatgtacagttcagaaaaggatgcacaacggagtaaaacagagtaagagagaagaaagaaagacacaggtaattatacaggttccttcca 12753394  T
Q  219 caaaccagaagt 230  Q
    |||||| |||||    
T  12753393 caaaccggaagt 12753382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 45862530 - 45862319
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| ||||||| |||| || | |||| |     ||||  ||||||||||||||||||||||||||||||| || |||    
T  45862530 gaattgtgttttctttttctcaagataaaatcttcttctgaggttacttca-----tgttgaaaaacgcttctgatgtgatgacacttcagaggcagttg 45862436  T
Q  119 actt-gcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaaga----aagacacagacaattatactggttcc 213  Q
    |||| |||||||||||||| | |||||||||||   ||||||| ||||||||||||||||||||||||||    ||||||||| ||||||||| ||||||    
T  45862435 actttgcttctgatgtgcagttcagaattggatgcacagcggagtaaaacagagtaagagagaagaaagaaagaaagacacaggcaattatacaggttcc 45862336  T
Q  214 ttccacaaaccagaagt 230  Q
    ||||||||||| |||||    
T  45862335 ttccacaaaccggaagt 45862319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 242
Target Start/End: Original strand, 17017220 - 17017442
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| ||||| ||| |  | ||||| |||||| ||||||| ||||| ||||| | |  |||||||||||||| | ||||||||  |||||     
T  17017220 gaattgtgttttctttttcccaaaaa-atatcttcttctaatatcacttcagaagctgtttaagagtgcttctgatgtgataatacttcagatgcaatta 17017318  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | |||||||||||||| | | |||||| |||||  ||||||| ||||| ||||||| ||||||||||||| |||||||  | ||||||||||||||||||    
T  17017319 aattgcttctgatgtgaagttcagaatcggatacacagcggattaaaaacagagta-gagagaagaaagagagacacaagcgattatactggttccttcc 17017417  T
Q  218 acaaaccagaagtagtctagtcccc 242  Q
    ||||||| ||||||||| |||||||    
T  17017418 acaaaccggaagtagtccagtcccc 17017442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 154 - 247
Target Start/End: Original strand, 13953587 - 13953680
Alignment:
Q  154 cagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  13953587 cagcggagtaaaacaaagtaagagaaaagaaagaaagacacaggcaattatactggttccttccacaaaccggaagtagtccagtcccccttgc 13953680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 247
Target Start/End: Original strand, 17006425 - 17006611
Alignment:
Q  61 atcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaattggataagcagcgga 160  Q
    ||||||| ||||| ||||| | |  |||||||||||||| | ||||||||  ||||| | ||||||||||| || | | |||||| ||||| ||||||||    
T  17006425 atcacttcagaagctgtttaagagtgcttctgatgtgataatacttcagatgcaattaaattgcttctgatatgaagttcagaatcggatacgcagcgga 17006524  T
Q  161 ataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
     ||||| || |||| ||||||||||||| |||||||  | |||||||||||| |||||||||||  ||||||||||||||||| ||||    
T  17006525 ttaaaaacatagta-gagagaagaaagagagacacaagcgattatactggtttcttccacaaactggaagtagtctagtcccccttgc 17006611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 247
Target Start/End: Complemental strand, 51989964 - 51989763
Alignment:
Q  46 aaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaat 145  Q
    ||||||| |||| | ||||||| ||||| ||||||| |  |||||||||||||| | | ||||||  ||||| | |||||||||||||    | ||||||    
T  51989964 aaatcttcttctgatatcacttcagaagctgtttgagagtgcttctgatgtgataatatttcagatgcaattaaattgcttctgatgtattgttcagaat 51989865  T
Q  146 tggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctt 244  Q
     ||||| ||| |||| ||||| |||||||| ||| |||||||| |||||||  ||||||||||| ||||||||||||||| ||||||||| ||||||| |    
T  51989864 cggatacgcaacggagtaaaaacagagtaa-agaaaagaaagagagacacaagcaattatactgattccttccacaaaccggaagtagtccagtccccct 51989766  T
Q  245 tgc 247  Q
    |||    
T  51989765 tgc 51989763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 242
Target Start/End: Original strand, 10528665 - 10528786
Alignment:
Q  123 gcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagta-agagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||| | | | |||||||||||| |||||||||||||| ||||||| ||| |||||||||| |||||||  ||||||| |||||||||||||||    
T  10528665 gcttctgatgagaagttcagaattggatacgcagcggaataaaaacagagtagagaaagaagaaagagagacacaagcaattatcctggttccttccaca 10528764  T
Q  221 aaccagaagtagtctagtcccc 242  Q
    |||| ||||||||| |||||||    
T  10528765 aaccggaagtagtccagtcccc 10528786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 15651812 - 15651715
Alignment:
Q  149 ataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||||||||||||| | ||||| |||||||| |||| ||  ||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  15651812 ataagcagcggaataaaacaga-tcagagaaaagaaagatagacgcaagcaattatcctggttccttccacaaaccggaagtagtctagtcccccttgc 15651715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 37411968 - 37412053
Alignment:
Q  163 aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagt-agtctagtcccctttgc 247  Q
    |||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||| ||||| ||||| |||||| ||||    
T  37411968 aaaacagagtaagagagaagaaagaaagacacaagcaattatacaggttccttccacaaaccggaagtcagtcttgtcccccttgc 37412053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 31114711 - 31114604
Alignment:
Q  140 cagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagt 238  Q
    |||||| ||||| |||||||| ||||| ||||||| |||| |||||||| |||||||  ||||||||||||||||||||||||||| ||||||||| |||    
T  31114711 cagaatcggatacgcagcggagtaaaaacagagta-gagaaaagaaagagagacacaagcaattatactggttccttccacaaaccggaagtagtccagt 31114613  T
Q  239 cccctttgc 247  Q
    |||| ||||    
T  31114612 cccccttgc 31114604  T

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Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 1053234 - 1053332
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  1053234 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 1053332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 1063637 - 1063761
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||  |||| ||||| ||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||    
T  1063637 tgcttctgatgtgatgttcagaatcagatatgcagcagaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaa 1063735  T
Q  222 accagaagtagtctagtcccctttgc 247  Q
    ||||||||| ||| ||||||| ||||    
T  1063736 accagaagttgtccagtcccccttgc 1063761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 41044931 - 41045159
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||   |  |||||||||||| | ||||||| ||||| ||||||| |  |||| |||||| || | ||||||||  || ||     
T  41044931 gaattgtgttttctttttctcttaaaaaaatctttttctgatatcacttcagaagctgtttgagagtgcttatgatgtaataatacttcagatgcagtta 41045030  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | |||||||||||||    | ||||||  |||| |||||||| ||||| ||||||| |||| |||||||| ||||||| ||||||||||| ||||||||     
T  41045031 aattgcttctgatgtattgttcagaatcagatacgcagcggagtaaaaacagagta-gagaaaagaaagagagacacaaacaattatactagttccttct 41045129  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||  ||||||||| | ||||| ||||    
T  41045130 acaaactggaagtagtccaatcccccttgc 41045159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 247
Target Start/End: Complemental strand, 29948084 - 29947957
Alignment:
Q  121 ttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaa-ttatactggttccttcca 218  Q
    ||||||||||||||   | ||||||  |||| |||||||||||||| ||||||| ||||||||||||| |||||||  ||| |||| |||||||||||||    
T  29948084 ttgcttctgatgtgatgttcagaatcagatatgcagcggaataaaaacagagta-gagagaagaaagagagacacaagcaaattatcctggttccttcca 29947986  T
Q  219 caaaccagaagtagtctagtcccctttgc 247  Q
    |||||| ||||||||| ||||||| ||||    
T  29947985 caaaccggaagtagtccagtcccccttgc 29947957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 247
Target Start/End: Complemental strand, 29997238 - 29997111
Alignment:
Q  121 ttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaa-ttatactggttccttcca 218  Q
    ||||||||||||||   | ||||||  |||| |||||||||||||| ||||||| ||||||||||||| |||||||  ||| |||| |||||||||||||    
T  29997238 ttgcttctgatgtgatgttcagaatcagatatgcagcggaataaaaacagagta-gagagaagaaagagagacacaagcaaattatcctggttccttcca 29997140  T
Q  219 caaaccagaagtagtctagtcccctttgc 247  Q
    |||||| ||||||||| ||||||| ||||    
T  29997139 caaaccggaagtagtccagtcccccttgc 29997111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 8996665 - 8996567
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| ||||||||||||||||  |||||||  |||||||||||||||| | ||||||||| ||||||| ||||    
T  8996665 gatatgcagcggaataaaacagagca-gagaaaagaaagaaagacacaagcaattattttggttccttccacaaatcggaagtagtccagtcccccttgc 8996567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 9007217 - 9007119
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| |||||||||||| ||| |||| |||| ||||||||||||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  9007217 gatatgcagcggaataatacatagta-gagaaaagaaagaaagacacaagcaattatcctggttccttccacaaatcggaagtagtccagtcccccttgc 9007119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 8740859 - 8740734
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||  |||| ||||||||||||||||||| |||||| | ||||||||||||||  ||||||| ||||||||||||||||    
T  8740859 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaacagag-aagagaaaggaaagaaagacacaagcaattatcctggttccttccacaa 8740761  T
Q  222 accagaagtagtctagtcccctttgct 248  Q
    | |  |||||||| |||| || |||||    
T  8740760 atcgaaagtagtccagtctcccttgct 8740734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 15663474 - 15663374
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||  |||||||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||    
T  15663474 tgcttctgatgtgatgttcagaatcagataagcagcggaataaaacagagca-gagaaaagaaagatagacacaagcaattatcctggttccttccacaa 15663376  T
Q  222 ac 223  Q
    ||    
T  15663375 ac 15663374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 21735683 - 21735790
Alignment:
Q  140 cagaattggataagcagcggaat-aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagt 238  Q
    ||||||| |||| |||||||||| ||||||||| || ||| |||||||| |||||||  ||||||| ||||||||||||||||| | ||||||||| |||    
T  21735683 cagaattagatatgcagcggaatgaaaacagagcaa-agaaaagaaagagagacacaagcaattatcctggttccttccacaaatcggaagtagtccagt 21735781  T
Q  239 cccctttgc 247  Q
    |||| ||||    
T  21735782 cccccttgc 21735790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 17282142 - 17282045
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| |||||||| |||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||| ||||||||||| ||||||| ||||    
T  17282142 gatatgcagcgga-taaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaatcagaagtagtccagtcccccttgc 17282045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 13199984 - 13199859
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||||||| ||||| | |||| |||||||| |||||||  ||||||| |||||||||||||||    
T  13199984 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccaca 13199886  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    || | ||||||||| ||||||| ||||    
T  13199885 aatcggaagtagtccagtcccccttgc 13199859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 27882934 - 27883007
Alignment:
Q  174 agagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  27882934 agagaaaagaaagaaagacacaagcaattatcctggttccttccacaaatcggaagtagtccagtcccccttgc 27883007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 247
Target Start/End: Complemental strand, 29934298 - 29934171
Alignment:
Q  121 ttgcttctgatgtgcaatacagaattggataagcagcggaataaaac-agagtaagagagaagaaagaaagacac-agacaattatactggttccttcca 218  Q
    ||||||||||||||   | ||||||  |||| ||||||||||||||  |||||| ||||||||||||| |||||| ||  |||||| |||| ||||||||    
T  29934298 ttgcttctgatgtgatgttcagaatcagatatgcagcggaataaaaatagagta-gagagaagaaagagagacacgagcaaattatcctggatccttcca 29934200  T
Q  219 caaaccagaagtagtctagtcccctttgc 247  Q
    |||||| ||||||||| ||||||| ||||    
T  29934199 caaaccggaagtagtccagtcccccttgc 29934171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 29952250 - 29952178
Alignment:
Q  176 agagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||| ||||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||||||||    
T  29952250 agagaaaaaagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcctgtcccctttgc 29952178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 247
Target Start/End: Complemental strand, 29983452 - 29983325
Alignment:
Q  121 ttgcttctgatgtgcaatacagaattggataagcagcggaataaaac-agagtaagagagaagaaagaaagacac-agacaattatactggttccttcca 218  Q
    ||||||||||||||   | ||||||  |||| ||||||||||||||  |||||| ||||||||||||| |||||| ||  |||||| |||| ||||||||    
T  29983452 ttgcttctgatgtgatgttcagaatcagatatgcagcggaataaaaatagagta-gagagaagaaagagagacacgagcaaattatcctggatccttcca 29983354  T
Q  219 caaaccagaagtagtctagtcccctttgc 247  Q
    |||||| ||||||||| ||||||| ||||    
T  29983353 caaaccggaagtagtccagtcccccttgc 29983325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 30001404 - 30001332
Alignment:
Q  176 agagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||| ||||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||||||||    
T  30001404 agagaaaaaagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcctgtcccctttgc 30001332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 16076458 - 16076552
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaa-gaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| ||||||||||||| | ||||||||||| |  |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  16076458 gcagcagaataaaacagagca-gagagaagaaaagcgagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 16076552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 51340291 - 51340372
Alignment:
Q  140 cagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaa 222  Q
    |||||||||||   ||||||| |||||||||| |||||||||||||||| ||||||  ||||||||| |||||||| ||||||    
T  51340291 cagaattggatgcacagcggagtaaaacagag-aagagagaagaaagaaggacacaagcaattatacaggttcctttcacaaa 51340372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 17239728 - 17239664
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||| |||||| ||||    
T  17239728 aagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgc 17239664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 14580637 - 14580751
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||||||| ||||| | |||| |||||||| |||||||  || |||| |||||||||||||||    
T  14580637 tgcttctgatgtgatgttcagaataagatatgcagcggaataaaaacagagca-gagaaaagaaagagagacacaagcagttatcctggttccttccaca 14580735  T
Q  221 aaccagaagtagtcta 236  Q
    | || |||||||||||    
T  14580736 atccggaagtagtcta 14580751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 51340203 - 51340294
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcaga 110  Q
    ||||||||||||| |||||||||||| ||||||| |||| || |||||| ||||| ||||  || | ||||  |||||||| ||||||||||    
T  51340203 gaattgtgttttctttttctcaagataaaatcttcttctgaggtcacttcagaagctgttgaaagatgctttcgatgtgataacacttcaga 51340294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 2560529 - 2560603
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  2560529 agagagaaagaagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 2560603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 26418492 - 26418431
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtc 234  Q
    |||||||  ||||||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  26418492 agagagagaaaagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtc 26418431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 13781421 - 13781345
Alignment:
Q  152 agcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt 230  Q
    ||||||||| ||||||||||  ||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||    
T  13781421 agcagcgga-taaaacagag--agagagaaagaagaaagacacaaaacaattatacaggttccttccacaaaccggaagt 13781345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 13931350 - 13931413
Alignment:
Q  185 agaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||||| | || |||| |||||||||||||||| || ||||||||| ||||||||||||    
T  13931350 agaaagacacaaaacagttatcctggttccttccacaatccggaagtagtccagtcccctttgc 13931413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 2245923 - 2245981
Alignment:
Q  184 aagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
    |||| |||||||  |||||||  |||||||||||||||||| ||||||||| |||||||    
T  2245923 aagagagacacaagcaattatcatggttccttccacaaaccggaagtagtccagtcccc 2245981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 6090070 - 6090144
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||||||||| | | ||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  6090070 agagagaaagaagaaagacacaaagccattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 6090144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 6252774 - 6252824
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagt 233  Q
    |||||||||||| | ||||||||| ||||||||||||||||| ||||||||    
T  6252774 aagaaagacacaaatcaattatacaggttccttccacaaaccggaagtagt 6252824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 16031964 - 16032010
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctt 244  Q
    ||||||||| |||||||||||||||||  ||||||||| ||||||||    
T  16031964 caattatacaggttccttccacaaaccgaaagtagtcttgtcccctt 16032010  T

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Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 17960981 - 17961027
Alignment:
Q  201 ttatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||||||||||||||| || ||||||||| ||||||| ||||    
T  17960981 ttatactggttccttccacaatccggaagtagtccagtcccccttgc 17961027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 27172428 - 27172486
Alignment:
Q  189 agacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||  ||||||| |||||||||||||||| || ||||||||| ||||||| ||||    
T  27172428 agacacaagcaattatcctggttccttccacaatccggaagtagtccagtcccccttgc 27172486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 52919808 - 52919882
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||| ||||||||||| | | ||||||||| |||| |||||||||| | |||||||||| |||||| ||||    
T  52919808 agagagaaaaaagaaagacaaaaagcaattatacaggtttcttccacaaatcggaagtagtcttgtcccccttgc 52919882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 504873 - 504778
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  504873 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 504778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 527239 - 527144
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  527239 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 527144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 3238060 - 3238109
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  3238060 caattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 3238109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 4743268 - 4743363
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  4743268 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 4743363  T

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Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 4753855 - 4753950
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  4753855 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 4753950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 5510226 - 5510321
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  5510226 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 5510321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 5520404 - 5520499
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  5520404 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 5520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 16385605 - 16385700
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  16385605 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 16385700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 16881636 - 16881705
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
    ||||||| || ||||||||||| | ||||||||| ||||||||||| || || |||||||||| ||||||    
T  16881636 agagagaggatagaaagacacaaaacaattatacaggttccttccataatccggaagtagtcttgtcccc 16881705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 247
Target Start/End: Original strand, 20645478 - 20645571
Alignment:
Q  152 agcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| ||||||||||  ||||||||  |||||||||||| | |||||||||  ||| |||||||||||| |||||||||  |||||| ||||    
T  20645478 agcagcgga-taaaacagag--agagagaaagaagaaagacacaaagcaattatacatgtttcttccacaaaccggaagtagtcatgtcccccttgc 20645571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 23538954 - 23538905
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  23538954 caattatacaggttccttccacaaaccggaagtagtcctgtccccattgc 23538905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 24659430 - 24659525
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  24659430 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 24659525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 24670010 - 24670105
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  24670010 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 24670105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 35186907 - 35187002
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  35186907 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 35187002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 35579127 - 35579032
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  35579127 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 35579032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 41683208 - 41683303
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  41683208 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 41683303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 41693777 - 41693872
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  41693777 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 41693872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 46350637 - 46350592
Alignment:
Q  198 caattatactggttccttccacaaaccagaagt-agtctagtcccc 242  Q
    ||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  46350637 caattatacaggttccttccacaaaccagaagtcagtcttgtcccc 46350592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 46797201 - 46797136
Alignment:
Q  184 aagaaagacacagacaatt-atactggttccttccacaaaccagaagt-agtctagtcccctttgc 247  Q
    |||||||||||| |||||| |||| ||||||||||||||||| ||||| ||||| |||||| ||||    
T  46797201 aagaaagacacaaacaatttatacaggttccttccacaaaccggaagtcagtcttgtcccccttgc 46797136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 933192 - 933252
Alignment:
Q  187 aaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  933192 aaagacacaagcagttatcctggttccttccacaaaacggaagtagtccagtcccccttgc 933252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 1795157 - 1795093
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  1795157 aaagcaagacacaagcagttatcctggttccttccacaaaacggaagtagtccagtcccccttgc 1795093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 7805192 - 7805128
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  7805192 aaagcaagacacaagcagttatcctggttccttccacaaaacggaagtagtccagtcccccttgc 7805128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 11206747 - 11206683
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  11206747 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 11206683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 11217398 - 11217334
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  11217398 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 11217334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 13939228 - 13939313
Alignment:
Q  161 ataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||  ||||||||  |||||||||||| | |||||||||  |||||||||||||||| ||||| |||  |||||| ||||    
T  13939228 ataaaacagag--agagagaaagaagaaagacacaaagcaattatacaagttccttccacaaaccggaagttgtcatgtcccccttgc 13939313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 15194713 - 15194649
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  15194713 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 15194649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 17910679 - 17910615
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  17910679 aaagcaagacacaagcagttatcctggttccttccacaaaacggaagtagtccagtcccccttgc 17910615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 19121514 - 19121450
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  19121514 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 19121450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 20724441 - 20724505
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||  ||||||||||||||||| |||||||||  |||||| ||||    
T  20724441 aagaaagacacaaaacaattatataggttccttccacaaaccggaagtagtcctgtcccccttgc 20724505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 24707229 - 24707165
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  24707229 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 24707165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 29906856 - 29906792
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  29906856 aaagtaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 29906792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 48336803 - 48336867
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  48336803 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 48336867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 49989489 - 49989537
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactt 67  Q
    ||||||||||||| |||||||||||| || |||| |||| |||||||||    
T  49989489 gaattgtgttttctttttctcaagataaattcttcttctgagatcactt 49989537  T

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Target: chr4 (Bit Score: 144; Significance: 8e-76; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 19 - 242
Target Start/End: Original strand, 33377594 - 33377817
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| || |||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  33377594 gaattgtgttttctttttctcaagataaattcttcttctgagatcacttcagaagctgtttgaaaacgcttctgatgtgatgacacttcagaggcaattg 33377693  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    | |||||||||||||||| | |||||||| ||| |||||||| |||| |||||||||| |||||| |||||||||||| |||||||||||||||||||||    
T  33377694 atttgcttctgatgtgcagttcagaattgtatatgcagcggagtaaatcagagtaagatagaagatagaaagacacaggcaattatactggttccttcca 33377793  T
Q  219 caaaccagaagtagtctagtcccc 242  Q
    |||||| ||||||||| |||||||    
T  33377794 caaaccggaagtagtccagtcccc 33377817  T

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Target: chr4; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 36210954 - 36210726
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| ||||||| |||| | ||||||| ||||| ||||| | |  |||||||||||||| | ||||||||  |||||     
T  36210954 gaattgtgttttctttttctcaagataaaatcttcttctgatatcacttcagaagctgtttaagagtgcttctgatgtgataatacttcagatgcaatta 36210855  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaat-aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | |||||||||||||| | | ||||||||||||  ||||||| | |||||||||| |||||||| ||||| ||||||| |||||||||||||||| ||||    
T  36210854 aattgcttctgatgtgtagttcagaattggatacacagcggagtaaaaacagagt-agagagaataaagagagacacaaacaattatactggttcgttcc 36210756  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||||| ||||||| ||||    
T  36210755 acaaaccggaagtagtccagtcccccttgc 36210726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 14779290 - 14779059
Alignment:
Q  19 gaattgtgttttcattttctc--aagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaat 116  Q
    ||||||||||||| |||||||  || |  ||||||| |||| | ||||||| ||||| ||||||| |  ||||||||||| || | ||||||||  ||||    
T  14779290 gaattgtgttttctttttctcttaaaaaaaaatcttcttctgatatcacttcagaagctgtttgagagtgcttctgatgtaataatacttcagatgcaat 14779191  T
Q  117 tgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaa--cagagtaagagagaagaaagaaagacacagacaattatactggttcct 214  Q
    | | |||||||||||||    | |||||| ||||| |||||||| |||||  ||||||| |||| |||||||| |||||||  |||||||||||||||||    
T  14779190 taaattgcttctgatgtattgttcagaatcggatacgcagcggagtaaaaaacagagta-gagaaaagaaagagagacacaagcaattatactggttcct 14779092  T
Q  215 tccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||| ||||||||| ||||||| ||||    
T  14779091 tccacaaaccggaagtagtccagtcccccttgc 14779059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 247
Target Start/End: Complemental strand, 14711597 - 14711395
Alignment:
Q  46 aaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaat 145  Q
    ||||||| |||| | ||||||| ||||| ||||||| |  ||||||||||| || | |||| |||  ||||| | |||||||||||||    | ||||||    
T  14711597 aaatcttcttctgatatcacttcagaagctgtttgagagtgcttctgatgtaataatactttagatgcaattaaattgcttctgatgtattgttcagaat 14711498  T
Q  146 tggataagcagcggaataaaa--cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccct 243  Q
     ||||| |||||||| |||||  ||||||| |||| |||||||| |||||||  ||||||||||||||||||||||||||| ||||||||| |||||||     
T  14711497 cggatacgcagcggagtaaaaaacagagta-gagaaaagaaagagagacacaagcaattatactggttccttccacaaaccggaagtagtccagtccccc 14711399  T
Q  244 ttgc 247  Q
    ||||    
T  14711398 ttgc 14711395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 244
Target Start/End: Complemental strand, 31267532 - 31267411
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||  |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||    
T  31267532 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaa 31267434  T
Q  222 accagaagtagtctagtcccctt 244  Q
    ||| ||||||||| |||||||||    
T  31267433 accggaagtagtccagtcccctt 31267411  T

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Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 11535364 - 11535488
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||  |||| ||||||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||||||||||||    
T  11535364 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaacagagta-gagaaaggaaagaaagacacaagcaattatcctggttccttccacaa 11535462  T
Q  222 accagaagtagtctagtcccctttgc 247  Q
    | | ||||||||| ||||||| ||||    
T  11535463 atcggaagtagtccagtcccccttgc 11535488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 247
Target Start/End: Complemental strand, 39532410 - 39532318
Alignment:
Q  154 cagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||||||||| | |||| |||||||| ||||||| |||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  39532410 cagcggaataaaacagagca-gagaaaagaaagagagacacaaacaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 39532318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 242
Target Start/End: Complemental strand, 17994553 - 17994374
Alignment:
Q  61 atcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaattggataagcagcgga 160  Q
    ||||||| ||||| ||||||| |  |||||||||||||| | ||||| ||  ||||| | |||||||||||||    | |||||| ||||| ||| ||||    
T  17994553 atcacttcagaagctgtttgacagtgcttctgatgtgataatacttctgatgcaattaaattgcttctgatgtattgttcagaatcggatacgcaacgga 17994454  T
Q  161 ataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
     ||||| | ||| ||||| |||||||| |||||||  ||||||||||||||||||| ||||||| ||||||||| |||||||    
T  17994453 gtaaaa-acagt-agagaaaagaaagagagacacaagcaattatactggttccttctacaaaccggaagtagtccagtcccc 17994374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 18007788 - 18007705
Alignment:
Q  163 aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||||| |||| |||||||| |||||||| ||||||||||||||| ||||||||||| ||||||||| ||||||| ||||    
T  18007788 aaaacagagta-gagaaaagaaagagagacacaggcaattatactggttctttccacaaaccggaagtagtccagtcccccttgc 18007705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 23508661 - 23508786
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||| ||  || ||||||  |||| |||||||||||||| ||||||| |||| |||||||| |||||||  ||||||| ||||||| |||||||    
T  23508661 tgcttctgatatgatattcagaatcagatatgcagcggaataaaaacagagta-gagaaaagaaagagagacacaagcaattatcctggttcattccaca 23508759  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||| ||||||| ||||    
T  23508760 aaccggaagtagtcaagtcccccttgc 23508786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 19241555 - 19241655
Alignment:
Q  140 cagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagt 238  Q
    |||||| ||||| |||||||| ||||| ||||||| |||| |||||||| | |||||  ||||||||||||||||||||||||||| ||||||||| |||    
T  19241555 cagaatcggatacgcagcggagtaaaaacagagta-gagaaaagaaagataaacacaagcaattatactggttccttccacaaaccggaagtagtccagt 19241653  T
Q  239 cc 240  Q
    ||    
T  19241654 cc 19241655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 18775715 - 18775616
Alignment:
Q  148 gataagcagcggaataaaac-agagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    |||| ||||||||||||||  |||||| |||| |||||||| ||||||| |||||||| |||||||||||||| |||| ||||||||| ||||||| |||    
T  18775715 gatacgcagcggaataaaagtagagta-gagaaaagaaagagagacacaaacaattatcctggttccttccacgaaccggaagtagtccagtcccccttg 18775617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 18776046 - 18775947
Alignment:
Q  148 gataagcagcggaataaaac-agagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    |||| ||||||||||||||  |||||| |||| |||||||| ||||||| |||||||| |||||||||||||| |||| ||||||||| ||||||| |||    
T  18776046 gatacgcagcggaataaaagtagagta-gagaaaagaaagagagacacaaacaattatcctggttccttccacgaaccggaagtagtccagtcccccttg 18775948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 49002721 - 49002596
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaat-aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||| ||||||||  | |||| |||||||| |||||||  ||||||| |||||||||||||||    
T  49002721 tgcttctgatgtgatgttcagaatcagatatgcagcggaatgaaaacagaaca-gagaaaagaaagagagacacaaccaattattctggttccttccaca 49002623  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||| ||||||| ||||    
T  49002622 aaccggaagtagtccagtcccccttgc 49002596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 11514554 - 11514678
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||  |||| | ||||||||||||||||| | |||| |||||||| |||  ||  ||||||| ||||||||||||||||    
T  11514554 tgcttctgatgtgatgttcagaatcagatatgtagcggaataaaacagagca-gagaaaagaaagagagatgcaagcaattatcctggttccttccacaa 11514652  T
Q  222 accagaagtagtctagtcccctttgc 247  Q
    ||| ||||||||| ||||||| ||||    
T  11514653 accggaagtagtccagtcccccttgc 11514678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 18775372 - 18775299
Alignment:
Q  174 agagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  18775372 agagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 18775299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 55650894 - 55650967
Alignment:
Q  174 agagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| |||||||| ||||||| |||||||| ||||||||||| ||||||| ||||||||| ||||||| ||||    
T  55650894 agagaaaagaaagagagacacaaacaattatcctggttccttctacaaaccggaagtagtccagtcccccttgc 55650967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 11915054 - 11915113
Alignment:
Q  189 agacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||| ||||    
T  11915054 agacacagagcaattatacaggttccttccacaaaccagaagtagtcttgtcccccttgc 11915113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 10290170 - 10290269
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaa-gaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    |||| ||||||||||||||||||| | |||| |||||| |  |||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||| |||    
T  10290170 gatatgcagcggaataaaacagagca-gagaaaagaaaagcgagacacaagcaattatcctggttccttccacaaatcggaagtagtccagtcccccttg 10290268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 16820059 - 16819965
Alignment:
Q  153 gcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||||| || |||| |||| |||||| | |||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  16820059 gcagcggaataaaaacatagta-gagaaaagaaacagagacacaagcaattatcctggttccttccacaaaacggaagtagtccagtcccccttgc 16819965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 23749862 - 23749936
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||||||||| | ||||||||| | ||||||||||||||| |||||||||| |||||| ||||    
T  23749862 agagagaaagaagaaagacacaaagcaattatacagattccttccacaaaccggaagtagtcttgtcccccttgc 23749936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 25656680 - 25656780
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtccccttt 245  Q
    |||| ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||| | ||||||||| ||||||| ||    
T  25656680 gatatgcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaaatcggaagtagtccagtccccctt 25656778  T
Q  246 gc 247  Q
    ||    
T  25656779 gc 25656780  T

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Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 29681265 - 29681215
Alignment:
Q  197 acaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||| |||||||||||||||||||||||||||  |||||| ||||    
T  29681265 acaattatacaggttccttccacaaaccagaagtagtcatgtcccccttgc 29681215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 37986385 - 37986311
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  37986385 agagagaaataagaaagacacaaaacaattatacaggttccttccacaaaccggaagtagtcctgtcccccttgc 37986311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 3394988 - 3395049
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtc 234  Q
    ||||||||| |||||||||||| | ||||||||| |||||||||||||||||  ||||||||    
T  3394988 agagagaaggaagaaagacacaaaacaattatacaggttccttccacaaaccgaaagtagtc 3395049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 10300079 - 10300178
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaa-gaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    |||| ||||||||||||||||| | | |||| |||||| |  |||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||| |||    
T  10300079 gatatgcagcggaataaaacagcgca-gagaaaagaaaagcgagacacaagcaattatcctggttccttccacaaatcggaagtagtccagtcccccttg 10300177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 15475895 - 15475859
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtc 234  Q
    ||||||||||||||||||||||||||| |||||||||    
T  15475895 caattatactggttccttccacaaaccggaagtagtc 15475859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 10661914 - 10661871
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtccc 241  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||    
T  10661914 caattatacaggttccttccacaaaccggaagtagtcttgtccc 10661871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 10876059 - 10876016
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtccc 241  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||    
T  10876059 caattatacaggttccttccacaaaccggaagtagtcttgtccc 10876016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 38513256 - 38513303
Alignment:
Q  184 aagaaagacacagacaatt-atactggttccttccacaaaccagaagt 230  Q
    ||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  38513256 aagaaagacacagacaatttatacaggttccttccacaaaccggaagt 38513303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 3370300 - 3370358
Alignment:
Q  189 agacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  3370300 agacacaagcaattatcctggttccttccacaaatcggaagtagtccagtcccccttgc 3370358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 19580839 - 19580885
Alignment:
Q  201 ttatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||| | ||||||||||||||||| ||||    
T  19580839 ttatcctggttccttccacaaaacggaagtagtctagtcccccttgc 19580885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 20649557 - 20649449
Alignment:
Q  140 cagaattggataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctag 237  Q
    ||||||| |||| ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||  | ||||||||| ||    
T  20649557 cagaattagatatgcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaacacggaagtagtccag 20649459  T
Q  238 tcccctttgc 247  Q
    ||||| ||||    
T  20649458 tcccccttgc 20649449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 24713013 - 24713071
Alignment:
Q  189 agacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  24713013 agacacaagcaattatcctggttccttccacaaatcggaagtagtccagtccccattgc 24713071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 40455064 - 40454964
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtccccttt 245  Q
    |||| ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||    
T  40455064 gatatgcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtccccctt 40454966  T
Q  246 gc 247  Q
    ||    
T  40454965 gc 40454964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 40471302 - 40471202
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtccccttt 245  Q
    |||| ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||    
T  40471302 gatatgcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtccccctt 40471204  T
Q  246 gc 247  Q
    ||    
T  40471203 gc 40471202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 55379648 - 55379722
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||||||||| | ||||||||| ||||||||||||||| | |||||||||  |||||| ||||    
T  55379648 agagagaaagaagaaagacacaaaacaattatacaggttccttccacaaaacggaagtagtcatgtcccccttgc 55379722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 10741305 - 10741210
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  10741305 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 10741210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 10751879 - 10751784
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  10751879 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 10751784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 10955074 - 10954979
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  10955074 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 10954979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 10965648 - 10965553
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  10965648 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 10965553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 17788788 - 17788739
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  17788788 caattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 17788739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 19945037 - 19944942
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  |||||||| ||| |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  19945037 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaaacagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 19944942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 22676295 - 22676238
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt 230  Q
    |||||||  ||||||||||||| | ||||||||| ||||||||||||||||| |||||    
T  22676295 agagagagaaaagaaagacacaaagcaattatacaggttccttccacaaaccggaagt 22676238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 36017885 - 36017980
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  36017885 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 36017980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 36028438 - 36028533
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  36028438 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 36028533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 49509527 - 49509622
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  49509527 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 49509622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 49517684 - 49517779
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  49517684 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 49517779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 5902281 - 5902225
Alignment:
Q  185 agaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtccc 241  Q
    |||||| |||| ||||||||||| ||||||| ||||  |||||||||||| ||||||    
T  5902281 agaaaggcacaaacaattatactagttcctttcacattccagaagtagtccagtccc 5902225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 11900555 - 11900603
Alignment:
Q  199 aattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  11900555 aattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 11900603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 16631759 - 16631835
Alignment:
Q  152 agcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt 230  Q
    ||||||||| ||||||||||  ||||||||  |||||||||| | | ||||||||| ||||||||||||||||| |||||    
T  16631759 agcagcgga-taaaacagag--agagagaaataagaaagacagaaagcaattatacaggttccttccacaaaccggaagt 16631835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 19143683 - 19143619
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  19143683 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 19143619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 22089634 - 22089698
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||||| ||| |||||  |||||| ||||    
T  22089634 aagaaagacacaaagcaattatacaggttccttccacaaaccggaattagtcatgtcccccttgc 22089698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 25008476 - 25008540
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  25008476 aaagcaagacacaagcagttatcctggttccttccacaaaacggaagtagtccagtcccccttgc 25008540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 19751 - 19980
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| ||||||| |||| ||||||||| ||||| |||||||||| |||||||||||||||||||||||||| ||||||    
T  19751 gaattgtgttttctttttctcaagattaaatcttcttctgagatcacttcagaagatgtttgaaaatgcttctgatgtgatgacacttcagaggcaattg 19850  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaat-aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | |||||||||||||||||| || ||||||||| |||||||| | |||||||||||||||||||||||||| ||||||  ||||||||||||||||||||    
T  19851 atttgcttctgatgtgcaattcataattggatatgcagcggagtaaaaacagagtaagagagaagaaagaaggacacatgcaattatactggttccttcc 19950  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||  ||||||||| ||| ||| ||||    
T  19951 acaaactggaagtagtccagttccccttgc 19980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 17370230 - 17370458
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| ||| ||| |||| ||||||||| ||||| ||||||||||| ||||||||||||| ||||||||||| ||||||    
T  17370230 gaattgtgttttctttttctcaagataaaaacttcttctgagatcacttcagaagctgtttgaaaacacttctgatgtgattacacttcagaggcaattg 17370329  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    |||||||||||| ||||| |  | ||||||||| |||||||| |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  17370330 acttgcttctgaggtgcagtttaaaattggatatgcagcggagtaaaacagagtaagagagaagaaagagagacacatgcaattatactggttccttcca 17370429  T
Q  219 caaaccagaagtagtctagtcccctttgc 247  Q
    |||||| ||||||||| ||||||| ||||    
T  17370430 caaaccggaagtagtcgagtccccattgc 17370458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 22642049 - 22642280
Alignment:
Q  19 gaattgtgttttcattttctcaaga--tgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaat 116  Q
    ||||||||||||| ||||||||| |  |  |||||| |||| ||||||||| ||||| | ||| | || |||||||||||||| ||||||||||  ||||    
T  22642049 gaattgtgttttctttttctcaaaaaatataatcttcttctgagatcacttcagaagctatttaagaatgcttctgatgtgataacacttcagatgcaat 22642148  T
Q  117 tgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttcctt 215  Q
    ||| |||||||||||||||| | || ||||||||| |||||| | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22642149 tgatttgcttctgatgtgcagttcaaaattggatacgcagcgaagtaaaaacagagtaagagagaagaaagaaagacacaggcaattatactggttcctt 22642248  T
Q  216 ccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| ||||||||| ||||||| ||||    
T  22642249 ccacaaaccggaagtagtccagtcccccttgc 22642280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 23058783 - 23059011
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| ||||||| |    ||||||| |||| | ||||||| ||||| ||||||| |  |||||||||||||| | ||||||||  |||||     
T  23058783 gaattgtgttttctttttctctattgaaaatcttcttctgatatcacttcagaagctgtttgagagtgcttctgatgtgataatacttcagatgcaatta 23058882  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | |||||||||||||    | |||||| ||||| |||||||| ||||| ||||||| |||| |||||||| |||||||  ||| ||||||||||||||||    
T  23058883 aattgcttctgatgtattgttcagaatcggatacgcagcggagtaaaaacagagta-gagaaaagaaagagagacacaagcaactatactggttccttcc 23058981  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||||  ||||||| ||||    
T  23058982 acaaaccggaagtagttcagtcccccttgc 23059011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 26549052 - 26548921
Alignment:
Q  116 ttgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttcct 214  Q
    |||| |||||||||||||| | |  ||||||||||| |||||||| ||||| ||||||| ||||||||||||| |||||||  |||||||||||||||||    
T  26549052 ttgatttgcttctgatgtgtagtttagaattggatacgcagcggagtaaaaacagagta-gagagaagaaagagagacacatgcaattatactggttcct 26548954  T
Q  215 tccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||| ||||||||| ||||||| ||||    
T  26548953 tccacaaaccggaagtagtccagtcccccttgc 26548921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 19171217 - 19170990
Alignment:
Q  19 gaattgtgttttcattttctc-aagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaatt 117  Q
    ||||||||||||| ||||||| ||||| ||||||| |||| | ||||||| || || |||  ||    |||||||||||||| | ||||||||  |||||    
T  19171217 gaattgtgttttctttttctctaagataaaatcttcttctgatatcacttcagtagctgtaagagt--gcttctgatgtgataatacttcagatgcaatt 19171120  T
Q  118 gacttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttc 216  Q
     | ||||||||||||||   | |||||| ||||| |||||||| ||||| ||||||| |||| |||||||| |||||||  |||||||| ||||||||||    
T  19171119 aaattgcttctgatgtgttgttcagaataggatacgcagcggagtaaaaacagagta-gagaaaagaaagagagacacaagcaattatattggttccttc 19171021  T
Q  217 cacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||| ||||||||| ||||||| ||||    
T  19171020 cacaaaccggaagtagtccagtcccccttgc 19170990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 22018642 - 22018748
Alignment:
Q  141 agaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtc 239  Q
    ||||||||||| |||||||| ||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  22018642 agaattggatacgcagcggagtaaaaacagagta-gagagaagaaagagagacacaggcaattatactggttccttccacaaaccggaagtagtccagtc 22018740  T
Q  240 ccctttgc 247  Q
    ||| ||||    
T  22018741 ccccttgc 22018748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 21541132 - 21541221
Alignment:
Q  158 ggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||||||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  21541132 ggaataaaacagagtaagagaaaagaaagaaggacacatgcaattatactggttccttccacaaaccggaagtagtccagtcccccttgc 21541221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 240
Target Start/End: Original strand, 19037223 - 19037417
Alignment:
Q  46 aaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaat 145  Q
    ||||||| |||| | ||||||| ||||| ||||||| |  |||||||||||||| | ||||||||  ||||| | |||||||||||||    | ||||||    
T  19037223 aaatcttcttctgatatcacttcagaagctgtttgagagtgcttctgatgtgataatacttcagatgcaattaaattgcttctgatgtattgttcagaat 19037322  T
Q  146 tggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcc 240  Q
      |||| |||||||| ||||| ||||||| |||| |||||||| |||||||  ||||||||||||||||||||||||| | ||||||||| |||||    
T  19037323 cagatacgcagcggagtaaaaacagagta-gagaaaagaaagagagacacaagcaattatactggttccttccacaaatcggaagtagtccagtcc 19037417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 45071382 - 45071257
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | |||||| ||||| |||||||||||||| ||||||| |||| |||||||| ||||||| |||||||| |||||||||||||||    
T  45071382 tgcttctgatgtgatgttcagaatcggatacgcagcggaataaaaacagagta-gagaaaagaaagagagacacaaacaattatcctggttccttccaca 45071284  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||| ||||||| ||||    
T  45071283 aaccggaagtagtccagtcccccttgc 45071257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 22018544 - 22018635
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcaga 110  Q
    ||||||||||||| |||||||||||| ||||||| |||| ||||||||| ||||| ||||||| || |||||||||||||| ||||||||||    
T  22018544 gaattgtgttttctttttctcaagataaaatcttcttctgagatcacttcagaagctgtttgagaatgcttctgatgtgataacacttcaga 22018635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 242
Target Start/End: Complemental strand, 52351503 - 52351282
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||   |  ||||||| |||| | ||||||| ||||| ||||||| |  |||||||||||||| | ||||| ||  |||||     
T  52351503 gaattgtgttttctttttctcttaaaaaaatcttcttctgatatcacttcagaagctgtttgacagtgcttctgatgtgataatacttctgatgcaatta 52351404  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    | |||||||||||||    | |||||| ||||| ||| |||| ||||| | ||| ||||| |||||||| |||||||  ||||||||||||||||||| |    
T  52351403 aattgcttctgatgtattgttcagaatcggatacgcaacggagtaaaa-acagt-agagaaaagaaagagagacacaagcaattatactggttccttcta 52351306  T
Q  219 caaaccagaagtagtctagtcccc 242  Q
    |||||| ||||||||| |||||||    
T  52351305 caaaccggaagtagtccagtcccc 52351282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 5929028 - 5929127
Alignment:
Q  148 gataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    |||| |||||||||||||| ||||||| |||| |||||||| ||||||| |||||||| |||||| |||||||||||| ||||||||||||||||| |||    
T  5929028 gatacgcagcggaataaaaacagagta-gagaaaagaaagagagacacaaacaattatcctggtttcttccacaaaccggaagtagtctagtcccccttg 5929126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 674901 - 674999
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  674901 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 674999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 154 - 247
Target Start/End: Complemental strand, 34256275 - 34256180
Alignment:
Q  154 cagcggaataaaacagagtaa-gagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagt-agtctagtcccctttgc 247  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||| ||||| ||||| |||||| ||||    
T  34256275 cagcggagtaaaacagagtaaagagagaagaaagaaggacacaggcaattatacaggttccttccacaaaccggaagtcagtcttgtcccccttgc 34256180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 247
Target Start/End: Original strand, 20251060 - 20251221
Alignment:
Q  86 gcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaac-agagtaagagagaagaa 184  Q
    |||| ||||| ||| | ||||||||  ||||| | |||||||||||||    | |||||||||||| |||||||| |||||  |||||| |||| |||||    
T  20251060 gcttttgatgagataatacttcagatgcaattaaattgcttctgatgtattgttcagaattggatacgcagcggagtaaaaatagagta-gagaaaagaa 20251158  T
Q  185 agaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||| |||||||  ||||||||||||||||||||||||||| ||||||||| | ||||| ||||    
T  20251159 agagagacacaagcaattatactggttccttccacaaaccggaagtagtccattcccccttgc 20251221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 28379178 - 28379410
Alignment:
Q  19 gaattgtgttttcattttctcaaga--tgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaat 116  Q
    ||||||||||||| ||||||||| |  |||| |||| |||| | ||||| | ||||| ||||| | |  |||||||||||||| | ||||||||  ||||    
T  28379178 gaattgtgttttctttttctcaaaaaatgaa-tcttcttctgatatcacatcagaagctgtttaagagtgcttctgatgtgataatacttcagatgcaat 28379276  T
Q  117 tgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaa----cagagtaagagagaagaaagaaagacacagacaattatactggttc 212  Q
    | | |||||||||||||    | |||||| ||||| |||||| | |||||    ||||||| |||| |||||||| |||||||  |||||||||||||||    
T  28379277 taaattgcttctgatgtattgttcagaatcggatacgcagcgaagtaaaaaaaacagagta-gagaaaagaaagagagacacaagcaattatactggttc 28379375  T
Q  213 cttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| ||||||||| | ||||| ||||    
T  28379376 cttccacaaaccggaagtagtccattcccccttgc 28379410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 242
Target Start/End: Complemental strand, 41133370 - 41133277
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| |||||||    
T  41133370 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccc 41133277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 12944664 - 12944762
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||| ||||||||||||| | |||| ||||||||||||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  12944664 gatatgcagcagaataaaacagagca-gagaaaagaaagaaagacacaagcaattatcctggttccttccacaaatcggaagtagtccagtcccccttgc 12944762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 14388881 - 14388783
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||| ||||||||||| ||||||||| ||||||| ||||    
T  14388881 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttcattccacaaaccggaagtagtccagtcccccttgc 14388783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 23926406 - 23926479
Alignment:
Q  174 agagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| |||||||| |||||||  ||||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  23926406 agagaaaagaaagagagacacaagcaattatactggttccttccacaaaccggaagtagtccagtcccccttgc 23926479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 18311726 - 18311628
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||  ||||||||||||||| ||||||||| ||||||| ||||    
T  18311726 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctaattccttccacaaaccggaagtagtccagtcccccttgc 18311628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 242
Target Start/End: Complemental strand, 46181633 - 46181513
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaata-aaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | |||||||  ||| ||||||||||| |||||||| | |||| |||||||| |||||||  ||||||| |||||||||||||||    
T  46181633 tgcttctgatgtgatgttcagaattatatatgcagcggaatagaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccaca 46181535  T
Q  221 aaccagaagtagtctagtcccc 242  Q
    || | ||||||||| |||||||    
T  46181534 aatcggaagtagtccagtcccc 46181513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 22610731 - 22610632
Alignment:
Q  148 gataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    |||| |||||||||||||| ||||| | |||| |||||||| |||||||  ||||||| || |||||||||||||||| ||||||||| ||||||| |||    
T  22610731 gatatgcagcggaataaaaacagagca-gagaaaagaaagagagacacaagcaattatcctcgttccttccacaaaccggaagtagtccagtcccccttg 22610633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 11195820 - 11195723
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| |||||||| |||||||||| | |||| |||||||  |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  11195820 gatacgcagcgga-taaaacagagca-gagaaaagaaagcgagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 11195723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 20196471 - 20196346
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaa-gaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||||||| |||| | |||| |||||| |  |||||||  ||||||| |||||||||||||||    
T  20196471 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaatagagca-gagaaaagaaaagtgagacacaagcaattatcctggttccttccaca 20196373  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    || | ||||||||| ||||||| ||||    
T  20196372 aatcggaagtagtccagtcccccttgc 20196346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 22428075 - 22428001
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  22428075 agagagaaataagaaagacacaaatcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 22428001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 30892447 - 30892508
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctt 244  Q
    |||||||||||| | ||||||||| | |||||||||||||||||||||||||  ||||||||    
T  30892447 aagaaagacacaaagcaattatacagattccttccacaaaccagaagtagtcatgtcccctt 30892508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 8698263 - 8698311
Alignment:
Q  199 aattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||| || ||||||||||||| |||||||||||||||||||| ||||    
T  8698263 aattatcctcgttccttccacaatccagaagtagtctagtccccattgc 8698311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 12283775 - 12283839
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  12283775 aagaaagacacaaaacaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 12283839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 21192602 - 21192527
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt-agtctagtcccctttgc 247  Q
    |||||||  ||||||||||||| | ||||||||||||||||||| ||||||| ||||| ||||| |||||| ||||    
T  21192602 agagagagaaaagaaagacacaaagcaattatactggttccttcaacaaaccggaagtcagtcttgtcccccttgc 21192527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 26549110 - 26549051
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtt 78  Q
    ||||||||||||| ||||||||| || ||||| | |||||||||||||| ||||| ||||    
T  26549110 gaattgtgttttctttttctcaaaataaaatcctcttctaagatcacttcagaagctgtt 26549051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 28493008 - 28492957
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtc 234  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  28493008 aagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtc 28492957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 5973212 - 5973312
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtccccttt 245  Q
    |||| ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||    
T  5973212 gatatgcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaaacggaagtagtccagtccccctt 5973310  T
Q  246 gc 247  Q
    ||    
T  5973311 gc 5973312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 155037 - 154942
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  155037 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 154942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 1577222 - 1577267
Alignment:
Q  186 gaaagacacaga-caattatactggttccttccacaaaccagaagt 230  Q
    |||||||||||| ||||||||| ||||||||||||||||| |||||    
T  1577222 gaaagacacagagcaattatacaggttccttccacaaaccggaagt 1577267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 2537994 - 2538089
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  2537994 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 2538089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 12625265 - 12625216
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  12625265 caattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 12625216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 17017959 - 17018008
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| ||||||||||| ||| |||||||||||| |||||| ||||    
T  17017959 caattatacaggttccttccataaatcagaagtagtcttgtcccccttgc 17018008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 19214933 - 19215006
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caa-ttatactggttccttccacaaacc 224  Q
    ||||||||  |||||||||  ||||||||| |||||||||||| | ||| |||||| |||||||||||||||||    
T  19214933 gcagcggataaaaacagagagagagagaaggaagaaagacacaaagcaatttatacaggttccttccacaaacc 19215006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 10756777 - 10756841
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | |||||||||  |||||||||||||||| |||||||||  |||||| ||||    
T  10756777 aagaaagacacaaatcaattatacatgttccttccacaaaccggaagtagtcatgtcccccttgc 10756841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 16233838 - 16233786
Alignment:
Q  195 agacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||||||  ||||||||||||| || |||||||||| |||||| ||||    
T  16233838 agacaattatacatgttccttccacaatccggaagtagtcttgtcccccttgc 16233786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 20908779 - 20908823
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
    ||||||||| ||||||||||||||| | |||||||||| ||||||    
T  20908779 caattatacaggttccttccacaaatctgaagtagtcttgtcccc 20908823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 22202461 - 22202397
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| | ||||||||||||||| |||||||||  |||||| ||||    
T  22202461 aagaaagacacaaagcaattatacagcttccttccacaaaccggaagtagtcctgtcccccttgc 22202397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 8e-70; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 23393584 - 23393355
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| ||||||| |||| | ||||||| ||||| |||||||||| |||||||||||||||||||||||||| || |||    
T  23393584 gaattgtgttttctttttctcaagataaaatcttcttctgaaatcacttcagaagctgtttgaaaatgcttctgatgtgatgacacttcagaggcacttg 23393485  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaat-aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | |||||||||||||||||| |||||||||||| |||||||| | |||||| ||||| ||||||||||||| ||||||  ||||||||||||||||||||    
T  23393484 atttgcttctgatgtgcaattcagaattggatatgcagcggagtaaaaacatagtaaaagagaagaaagaaggacacaagcaattatactggttccttcc 23393385  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||||| ||||||| ||||    
T  23393384 acaaaccggaagtagtccagtcccccttgc 23393355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 24802465 - 24802236
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||  |||||||||||| ||||||| |||| ||||||||| ||||| ||||||||||  |||||||||| |||||||||||||| ||||||    
T  24802465 gaattgtgttttgtttttctcaagataaaatcttcttctgagatcacttcagaagctgtttgaaaatacttctgatgtcatgacacttcagaggcaattg 24802366  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaat-aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | |||||||||||||||||| ||||||||||||  ||||||| | |||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||    
T  24802365 atttgcttctgatgtgcaattcagaattggatatacagcggagtaaaaacagagtaagagagaagaaagaaggacacatgcaattatactggttctttcc 24802266  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||||| ||||||| ||||    
T  24802265 acaaaccggaagtagtccagtcccccttgc 24802236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 22773830 - 22773954
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||||  || |||| ||||||||||||||||    
T  22773830 tgcttctgatgtgatgttcagaattagatatgcagcggaataaaacagagta-gagagaagaaagagagacacaagcatttatcctggttccttccacaa 22773928  T
Q  222 accagaagtagtctagtcccctttgc 247  Q
    ||| ||||||||| ||||||||||||    
T  22773929 accggaagtagtccagtcccctttgc 22773954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 242
Target Start/End: Complemental strand, 24815329 - 24815208
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaac-agagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    ||||||||||||| |||  ||||||||||| |||||||| |||||  ||||||| ||||||||||||| |||||| |||||||||| |||||||||||||    
T  24815329 tgcttctgatgtgaaatttagaattggatatgcagcggagtaaaaatagagtaacagagaagaaagaaggacacaaacaattataccggttccttccaca 24815230  T
Q  221 aaccagaagtagtctagtcccc 242  Q
    || | ||||||||| |||||||    
T  24815229 aatcggaagtagtccagtcccc 24815208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 17971023 - 17970898
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||||||| ||||| | ||||||||||||| |||||||  ||||||| |||||||||||||||    
T  17971023 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaaacagagca-gagagaagaaagagagacacaagcaattatcctggttccttccaca 17970925  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||| ||||    
T  17970924 aaccggaagtagtctagtcccccttgc 17970898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 242
Target Start/End: Original strand, 24274527 - 24274620
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
    |||| ||||||||||||||||||||| |||| ||||||||| ||||||  ||||||| ||||||||||||||||||| ||||||||| |||||||    
T  24274527 gatatgcagcggaataaaacagagta-gagaaaagaaagaaggacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccc 24274620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 38033520 - 38033445
Alignment:
Q  163 aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtc 239  Q
    ||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  38033520 aaaacagagta-gagaaaagaaagagagacacaaacaattatactggttccttccacaaaccagaagtagtccagtc 38033445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 19313747 - 19313622
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | |||||| ||||| |||||||||||||| ||||||| |||| || ||||| |||||||  ||||||| |||||||||||||||    
T  19313747 tgcttctgatgtgatgttcagaatcggatacgcagcggaataaaaacagagta-gagaaaaaaaagagagacacaagcaattatcctggttccttccaca 19313649  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||| ||||||| ||||    
T  19313648 aaccggaagtagtccagtcccccttgc 19313622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 19498696 - 19498595
Alignment:
Q  148 gataagcagcggaataaaa-cagagtaa-gagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtccccttt 245  Q
    |||| |||||||||||||| |||||||| |||| |||||||| |||||||  || |||||||||||||||||||||||| ||||||||| ||||||| ||    
T  19498696 gatatgcagcggaataaaaacagagtaaagagaaaagaaagagagacacaagcagttatactggttccttccacaaaccggaagtagtccagtccccctt 19498597  T
Q  246 gc 247  Q
    ||    
T  19498596 gc 19498595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 36785553 - 36785429
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||  |||| |||||||||||| |||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||    
T  36785553 tgcttctgatgtgatgttcagaatcagatatgcagcggaataacacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaa 36785455  T
Q  222 accagaagtagtctagtcccctttgc 247  Q
    ||| ||||||||| ||||||| ||||    
T  36785454 accggaagtagtccagtcccccttgc 36785429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 20647327 - 20647244
Alignment:
Q  163 aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||||| |||| |||||||| |||||||| ||||||||||||||| ||||||||||| ||||||||| ||||||| ||||    
T  20647327 aaaacagagta-gagaaaagaaagagagacacaggcaattatactggttctttccacaaaccggaagtagtccagtcccccttgc 20647244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 38040679 - 38040604
Alignment:
Q  163 aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtc 239  Q
    ||||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  38040679 aaaacagagta-gagaaaagaaagagagacacaaacaattatactggttccttccacaaaccggaagtagtccagtc 38040604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 968231 - 968133
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| |||||||||||||||| || ||||||||| ||||||| ||||    
T  968231 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaatccggaagtagtccagtcccccttgc 968133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 1041650 - 1041748
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| |||||||||||||||| || ||||||||| ||||||| ||||    
T  1041650 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaatccggaagtagtccagtcccccttgc 1041748  T

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Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 24815395 - 24815316
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtga 98  Q
    ||||||||||||| |||||||||||| ||||||| |||| ||||||||| ||||| | |||||||| |||||||||||||    
T  24815395 gaattgtgttttctttttctcaagataaaatcttcttctgagatcacttcagaagctctttgaaaatgcttctgatgtga 24815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 247
Target Start/End: Original strand, 22615137 - 22615298
Alignment:
Q  86 gcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaa 184  Q
    |||||||||||||| | |||| |||  ||||| | ||| |||||||||    | |||||||||||| |||||||| ||||| ||||||| |||| |||||    
T  22615137 gcttctgatgtgataatacttaagatgcaattaaattgtttctgatgtattgttcagaattggatacgcagcggagtaaaaacagagta-gagaaaagaa 22615235  T
Q  185 agaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||| ||| |||   |||||||||||||| ||||||||||| ||||||||| ||||||| ||||    
T  22615236 agagagatacaagaaattatactggttcattccacaaaccggaagtagtccagtcccccttgc 22615298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 20319530 - 20319437
Alignment:
Q  19 gaattgtgttttcattttctc-aagatgaaatctttttctaagatcactttagaagttgtttgaaaa-cgcttctgatgtgatgacacttcaga 110  Q
    ||||||||||||| ||||||| ||||| ||||||| |||| ||| ||||| ||||| |||||||||| ||||||||||||||| ||||||||||    
T  20319530 gaattgtgttttctttttctctaagataaaatcttcttctgagaccacttcagaagctgtttgaaaaacgcttctgatgtgattacacttcaga 20319437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 21537958 - 21537873
Alignment:
Q  161 ataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||  ||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||||||| |||||| ||||    
T  21537958 ataaaacagag--agagagaaagaagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgc 21537873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 22763125 - 22763250
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaat-aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||| ||||||||  | |||| |||||||| |||||||  ||||||| |||||||||||||||    
T  22763125 tgcttctgatgtgatgttcagaatcagatatgcagcggaatgaaaacagaaca-gagaaaagaaagagagacacaagcaattatcctggttccttccaca 22763223  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |  | ||||||||| ||||||| ||||    
T  22763224 acacggaagtagtccagtcccccttgc 22763250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 247
Target Start/End: Complemental strand, 19303156 - 19303056
Alignment:
Q  147 ggataagcagcggaat-aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtccccttt 245  Q
    ||||| |||||||||| ||||||| || ||||| || ||||| |||||||  ||||||| |||||||| |||||||| | ||||||||| ||||||| ||    
T  19303156 ggatacgcagcggaataaaaacagtgt-agagaaaaaaaagagagacacaagcaattatcctggttccctccacaaatcggaagtagtccagtccccctt 19303058  T
Q  246 gc 247  Q
    ||    
T  19303057 gc 19303056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 25828501 - 25828562
Alignment:
Q  174 agagagaagaaagaaagacacagac-aattatactggttccttccacaaaccagaagtagtc 234  Q
    ||||||||  |||||||||||| || |||||||| ||||||||||||||||| |||||||||    
T  25828501 agagagaaagaagaaagacacaaaccaattatacaggttccttccacaaaccggaagtagtc 25828562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 40781840 - 40781889
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||| ||||    
T  40781840 caattatacaggttccttccacaaaccggaagtagtcttgtcccccttgc 40781889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 18431689 - 18431625
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||| ||| ||||||||||||||||| |||||||||| |||||| ||||    
T  18431689 aagaaagacacaaaacaattgtacaggttccttccacaaaccggaagtagtcttgtccccgttgc 18431625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 24376455 - 24376519
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  24376455 aagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 24376519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 10010503 - 10010452
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtc 234  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  10010503 aagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtc 10010452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 22382826 - 22382885
Alignment:
Q  176 agagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtc 234  Q
    |||||| ||||||||||||| | ||||||||| |||||||||||||| || |||||||||    
T  22382826 agagaacaaagaaagacacaaaacaattatacaggttccttccacaatccggaagtagtc 22382885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 28732589 - 28732530
Alignment:
Q  188 aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||| ||| |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  28732589 aagacacaaacagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 28732530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 20569512 - 20569442
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt-agtctagtcccc 242  Q
    ||||||||  |||||||||||| | ||||||||| ||||||||||||||||| ||||| ||||| ||||||    
T  20569512 agagagaaagaagaaagacacaaagcaattatacaggttccttccacaaaccggaagtcagtcttgtcccc 20569442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 2560993 - 2561088
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  2560993 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 2561088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 10266498 - 10266593
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  10266498 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 10266593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 10277075 - 10277170
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  10277075 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 10277170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 11395897 - 11395802
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  11395897 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 11395802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 11406213 - 11406118
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  11406213 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 11406118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 21651229 - 21651134
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  21651229 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 21651134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 22915587 - 22915492
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||  ||||||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  22915587 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcaattatcctggttccttccacaacacggaagtagtccagtcccccttgc 22915492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 43344912 - 43345007
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  43344912 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 43345007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 43354527 - 43354622
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  43354527 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 43354622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 18702089 - 18702153
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| |||||||||||||||||  ||||||||  |||||| ||||    
T  18702089 aagaaagacacaaaacaattatacaggttccttccacaaaccgaaagtagtcatgtcccccttgc 18702153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 24428278 - 24428214
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  24428278 aaagcaagacacaagcagttatcctggttccttccacaaaacggaagtagtccagtcccccttgc 24428214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 30794345 - 30794409
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  30794345 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 30794409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 10921 - 11149
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaa-cgcttctgatgtgatgacacttcagagacaatt 117  Q
    ||||||||||||| |||||||||||| ||||||| |||| ||||||||| ||||| |||||||||| ||||||| ||||||| ||||||||||  |||||    
T  10921 gaattgtgttttctttttctcaagataaaatcttcttctgagatcacttcagaagctgtttgaaaaacgcttctaatgtgattacacttcagatgcaatt 11020  T
Q  118 gacttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    ||||||||||||||||||| | |||||||||||| |||||||| ||||||||| |||||||||| ||||| |||||||  ||||||||||||||||||||    
T  11021 gacttgcttctgatgtgcagttcagaattggatatgcagcggagtaaaacaga-taagagagaaaaaagagagacacaagcaattatactggttccttcc 11119  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| | ||||||||| ||||||||||||    
T  11120 acaaatcggaagtagtccagtcccctttgc 11149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 40002406 - 40002636
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttcta-agatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaatt 117  Q
    ||||||||||||| ||||||||| || ||||||| ||||  ||||||||| ||||| ||||| | || |||||||||||||| ||||||||||  ||||     
T  40002406 gaattgtgttttctttttctcaatataaaatcttcttcttgagatcacttcagaagctgtttaagaatgcttctgatgtgataacacttcagatgcaatg 40002505  T
Q  118 gacttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttc 216  Q
    || |||||||||||||||||| |||||||||||| |||||||| ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  40002506 gatttgcttctgatgtgcaattcagaattggatacgcagcggagtaaaaacagagtgagagagaagaaagaaagacacaaacaattatactggttccttc 40002605  T
Q  217 cacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||| ||||||||| ||||||| ||||    
T  40002606 cacaaaccggaagtagtccagtcccccttgc 40002636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 28902649 - 28902878
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatcttt-ttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaatt 117  Q
    ||||||||||||| ||||||||| |  |||| ||| |||| ||||||||| ||||| | ||||||||||||||||||||||||||||||||||| || ||    
T  28902649 gaattgtgttttctttttctcaaaaataaatttttcttctgagatcacttcagaagctatttgaaaacgcttctgatgtgatgacacttcagaggcagtt 28902748  T
Q  118 gacttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    ||||||||||||||||||| | |||||| | |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  28902749 gacttgcttctgatgtgcagttcagaatagaataagcagcggagtaaaacagagtgagagagaagaaagaaagacacagacaattatatcggttccttcc 28902848  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||| | | ||||||||  ||||||| ||||    
T  28902849 acagatcggaagtagttcagtcccccttgc 28902878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 21540144 - 21540355
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| ||||||| |||| || |||||| ||||  |||| |||||||||||||||||||||||||||||||  || |||    
T  21540144 gaattgtgttttctttttctcaagataaaatcttcttctgaggtcacttcagaatctgttggaaaacgcttctgatgtgatgacacttcagaagcagttg 21540243  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    |||||||||||||||||| | |||||| ||||    |||||| |||||||||||| || ||||||||||||||||||  |||||||||  ||||||||||    
T  21540244 acttgcttctgatgtgcagttcagaataggatgcatagcggagtaaaacagagtacgaaagaagaaagaaagacacatgcaattatacaagttccttcca 21540343  T
Q  219 caaaccagaagt 230  Q
    |||||| |||||    
T  21540344 caaaccggaagt 21540355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 24 - 230
Target Start/End: Complemental strand, 45568882 - 45568676
Alignment:
Q  24 gtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattgacttg 123  Q
    |||||||| ||||| |||||| ||||||| |||| || |||||| | ||| ||||  |||| ||||||||| |||||||||||| ||| || ||||||||    
T  45568882 gtgttttctttttcccaagataaaatcttcttctgaggtcacttcaaaagctgttgaaaaatgcttctgatatgatgacacttctgaggcagttgacttg 45568783  T
Q  124 cttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaac 223  Q
    ||||||||||||| | |||||||||||   ||||||| |||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  45568782 cttctgatgtgcagttcagaattggatgcacagcggagtaaaacagagtaagagagaagaaagaaagacacaggtaattatacaggttccttccacaaac 45568683  T
Q  224 cagaagt 230  Q
    | |||||    
T  45568682 cggaagt 45568676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 21298165 - 21298375
Alignment:
Q  20 aattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattga 119  Q
    |||| ||||||| ||||| |||||| ||||||| |||| || | ||||  |||  ||||  | |||||||||||||||| |||||| ||||  || ||||    
T  21298165 aattatgttttctttttcccaagataaaatcttcttctgaggttacttcggaaactgttgaagaacgcttctgatgtgaagacactccagaagcagttga 21298264  T
Q  120 cttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccac 219  Q
     |||||||||||||||| | ||||    |||   ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21298265 attgcttctgatgtgcagttcagatacagatgcacagcggagtaaaacagagtaagagagaagaaagaaagacacagacaattatacaggttccttccac 21298364  T
Q  220 aaaccagaagt 230  Q
    ||||| |||||    
T  21298365 aaaccggaagt 21298375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 21287584 - 21287813
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| ||||| |||||| ||||||| |||| || |||||  ||||  ||||  | |||||||| |||||||||||||||||||  || |||    
T  21287584 gaattgtgttttctttttcccaagataaaatcttcttctgaggtcactccagaaactgttgaagaacgcttccgatgtgatgacacttcagaagcagttg 21287683  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    | |||||||||||||||| | ||||     ||   ||||||| |||||||||||||||||||||||||||| |||||  ||||||||| |||||||||||    
T  21287684 aattgcttctgatgtgcagttcagatacaaatgcacagcggagtaaaacagagtaagagagaagaaagaaatacacatgcaattatacaggttccttcca 21287783  T
Q  219 caaaccagaagt-agtctagtcccctttgc 247  Q
    |||||| ||||| ||||| |||||| ||||    
T  21287784 caaaccggaagtcagtcttgtcccccttgc 21287813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 61 - 247
Target Start/End: Original strand, 29378831 - 29379017
Alignment:
Q  61 atcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaattggataagcagcgga 160  Q
    ||||||| ||||||||||| | |  |||| ||||||||| | ||||||||  ||||| | |||||||| ||||| | | |||||| ||||| |||| |||    
T  29378831 atcacttcagaagttgtttaagagtgcttttgatgtgataatacttcagatgcaattaaattgcttcttatgtgaagttcagaatcggatacgcagtgga 29378930  T
Q  161 ataa-aacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
     ||| ||||||||| ||||||||||||| | |||||  ||||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  29378931 ttaacaacagagta-gagagaagaaagagaaacacaagcaattatactggttccttccacaaaccggaagtagtccagtcccccttgc 29379017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 20260360 - 20260262
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||||| |||| ||||||||| ||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  20260360 gatatgcagcggaataaaacagagta-gagaaaagaaagaaggacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 20260262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 21046990 - 21046892
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||||| |||| ||||||||| ||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  21046990 gatatgcagcggaataaaacagagta-gagaaaagaaagaaggacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 21046892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 17519924 - 17519813
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    ||||| ||||||| | | |||||||||||| |||||||| ||||| ||||||| ||||||||||||| |||||||  ||||||||||||||||||||| |    
T  17519924 tgcttatgatgtgtagttcagaattggatacgcagcggagtaaaaacagagta-gagagaagaaagagagacacaagcaattatactggttccttccaaa 17519826  T
Q  221 aaccagaagtagt 233  Q
    |||| ||||||||    
T  17519825 aaccggaagtagt 17519813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 22212092 - 22212009
Alignment:
Q  163 aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||||| |||| |||||||| ||||||| |||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  22212092 aaaacagagta-gagaaaagaaagagagacacaaacaattatcctggttccttccacaaaccggaagtagtccagtcccctttgc 22212009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 3843060 - 3843158
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  3843060 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 3843158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 247
Target Start/End: Original strand, 8031264 - 8031465
Alignment:
Q  46 aaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaat 145  Q
    ||||||| |||| | ||||||| ||||| ||||||| |  |||||||||| ||| | |||||||| |||||| | |||||||||||||    | ||||||    
T  8031264 aaatcttcttctgatatcacttcagaagctgtttgagagtgcttctgatgagataatacttcagatacaattaaattgcttctgatgtattgttcagaat 8031363  T
Q  146 tggataagcagcggaat-aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctt 244  Q
      |||| |||| ||| | |||||||||| ||||| |||||||| || ||||  |||||||| ||||||||||||| |||| ||||||||| ||||||| |    
T  8031364 ctgatacgcagtggagtaaaaacagagt-agagaaaagaaagagaggcacaagcaattatattggttccttccacgaaccggaagtagtccagtccccct 8031462  T
Q  245 tgc 247  Q
    |||    
T  8031463 tgc 8031465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 22136605 - 22136506
Alignment:
Q  148 gataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    ||||||||||||||||||| ||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| |||    
T  22136605 gataagcagcggaataaaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttg 22136507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 22167770 - 22167671
Alignment:
Q  148 gataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    ||||||||||||||||||| ||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| |||    
T  22167770 gataagcagcggaataaaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttg 22167672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 23271934 - 23271827
Alignment:
Q  140 cagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagt 238  Q
    |||||| ||||| |||||||| ||||| ||||||| |||| |||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||| |||    
T  23271934 cagaatcggatacgcagcggagtaaaaacagagta-gagaaaagaaagagagacacaaacaattaaactagttccttccacaaaccggaagtagtccagt 23271836  T
Q  239 cccctttgc 247  Q
    |||| ||||    
T  23271835 cccccttgc 23271827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 7019163 - 7019064
Alignment:
Q  148 gataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    |||| |||||||||||||| ||||| | |||| |||||||| |||||||  ||||||||||||||||||||||||||| ||||||||| | ||||| |||    
T  7019163 gatatgcagcggaataaaaacagagca-gagaaaagaaagagagacacaagcaattatactggttccttccacaaaccggaagtagtccaatcccccttg 7019065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 15969620 - 15969537
Alignment:
Q  163 aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||||| |||| |||||||| |||||||  ||||||||||||||||||||||||||| |||||||||  |||||| ||||    
T  15969620 aaaacagagta-gagaaaagaaagagagacacaagcaattatactggttccttccacaaaccggaagtagtccggtcccccttgc 15969537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 23363639 - 23363764
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||||||| ||||| | |||| |||||||| |||||||  ||||||| || ||||||||||||    
T  23363639 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaaacagagca-gagaaaagaaagagagacacaatcaattatcctagttccttccaca 23363737  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||| ||||||| ||||    
T  23363738 aaccggaagtagtccagtcccccttgc 23363764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 19417924 - 19417988
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  19417924 aaagcaagacacaagcagttatcctggttccttccacaaatcagaagtagtccagtcccctttgc 19417988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 19428499 - 19428563
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  19428499 aaagcaagacacaagcagttatcctggttccttccacaaatcagaagtagtccagtcccctttgc 19428563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 24498869 - 24498811
Alignment:
Q  189 agacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||| |||||||||||||||| |||||||||||| ||||||| ||||    
T  24498869 agacacaggaaattatcctggttccttccacaatccagaagtagtccagtcccccttgc 24498811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 19460439 - 19460519
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatg 100  Q
    ||||||||||||| ||||||||| |  ||||||| |||| | ||||||||||||| ||||||| |  |||||||||||||||    
T  19460439 gaattgtgttttctttttctcaaaaa-aaatcttcttctgatatcactttagaagctgtttgagagtgcttctgatgtgatg 19460519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 19558117 - 19558197
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatg 100  Q
    ||||||||||||| ||||||||| |  ||||||| |||| | ||||||||||||| ||||||| |  |||||||||||||||    
T  19558117 gaattgtgttttctttttctcaaaaa-aaatcttcttctgatatcactttagaagctgtttgagagtgcttctgatgtgatg 19558197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 20161969 - 20161874
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||| ||||||||||| ||||||| ||||    
T  20161969 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaatcagaagtagtccagtcccccttgc 20161874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 20195527 - 20195622
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||| ||||||||||| ||||||| ||||    
T  20195527 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaatcagaagtagtccagtcccccttgc 20195622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 12758541 - 12758477
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  12758541 aagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 12758477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 15934466 - 15934402
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  15934466 aagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcctgtcccccttgc 15934402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 19224511 - 19224571
Alignment:
Q  187 aaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| ||| |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  19224511 aaagacacaaacagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 19224571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 20383142 - 20383078
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  20383142 aagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 20383078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 23470168 - 23470104
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  23470168 aaagcaagacacaagcagttatcctggttccttccacaaaccggaagtagtccagtcccccttgc 23470104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 17519990 - 17519912
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtg 97  Q
    ||||||||||||| ||||||||| |  ||||||| |||| ||||||||| ||||| ||||| | || |||| |||||||    
T  17519990 gaattgtgttttctttttctcaataaaaaatcttcttctgagatcacttcagaagctgtttaagaatgcttatgatgtg 17519912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 19942572 - 19942646
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||||||||| | ||||||||| |||||||||||||||||  ||||||||  |||||| ||||    
T  19942572 agagagaaagaagaaagacacaaagcaattatacaggttccttccacaaaccgaaagtagtcctgtcccccttgc 19942646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 9340685 - 9340780
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  9340685 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacagtcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 9340780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 9367829 - 9367924
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  9367829 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacagtcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 9367924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 18772018 - 18772089
Alignment:
Q  161 ataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtc 234  Q
    |||||||||||  ||||||| || ||| ||||| || ||||||||| |||||||| ||||||||||||||||||    
T  18772018 ataaaacagagagagagaga-gagagagagacaaag-caattatacaggttcctttcacaaaccagaagtagtc 18772089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 19128290 - 19128385
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||  ||||||||||| ||||||| ||||    
T  19128290 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaacacagaagtagtccagtcccccttgc 19128385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 19957142 - 19957093
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtag 232  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||    
T  19957142 aagaaagacacaaagcaattatacaggttccttccacaaaccggaagtag 19957093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 44480632 - 44480727
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  44480632 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 44480727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 44491248 - 44491343
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  44491248 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 44491343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 18679160 - 18679224
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||| ||||| |||||||||  |||||| ||||    
T  18679160 aagaaagacacaaagcaattatacaggttccttccataaaccggaagtagtcatgtcccccttgc 18679224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 18718349 - 18718413
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||| ||||| |||||||||  |||||| ||||    
T  18718349 aagaaagacacaaagcaattatacaggttccttccataaaccggaagtagtcatgtcccccttgc 18718413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 18769845 - 18769781
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  18769845 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 18769781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 20256346 - 20256266
Alignment:
Q  152 agcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtc 234  Q
    ||||||||| ||||||||||  ||||||||  |||||||||||| | |||||||||  |||||||||||||||| ||| |||||    
T  20256346 agcagcgga-taaaacagag--agagagaaagaagaaagacacaaagcaattatacaagttccttccacaaaccggaaatagtc 20256266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 25163388 - 25163481
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||||||  ||||||||  ||||| |||||| | ||||||||| ||||||||||| ||||| ||||||| || |||||| ||||    
T  25163388 gcagcggataaaaacagag--agagagaaagaagaacgacacaaagcaattatacaggttccttccataaaccggaagtagacttgtcccccttgc 25163481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 26832422 - 26832486
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||||  |||||||||  |||||| ||||    
T  26832422 aagaaagacacaaagcaattatacaggttccttccacaaacaggaagtagtcctgtcccccttgc 26832486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 30315408 - 30315344
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  ||||||| ||||||||||||||||| | |||||| || ||||||| ||||    
T  30315408 aaagcaagacacaagcaattatcctggttccttccacaaatcggaagtactccagtcccccttgc 30315344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 40213876 - 40213812
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  40213876 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 40213812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 43773465 - 43773513
Alignment:
Q  183 aaagaaagacacagacaatt-atactggttccttccacaaaccagaagt 230  Q
    |||| ||||||||||||||| |||| ||||||||||||||||| |||||    
T  43773465 aaagcaagacacagacaatttatacaggttccttccacaaaccggaagt 43773513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 4303 - 4534
Alignment:
Q  19 gaattgtgttttcattttctcaaga--tgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaat 116  Q
    ||||||||||||| ||||||||| |  |  |||||| |||| | ||||||| ||||| ||||| | || |||||||||||||| ||||||||||  ||||    
T  4303 gaattgtgttttctttttctcaaaaaatataatcttcttctgatatcacttcagaagctgtttaagaatgcttctgatgtgataacacttcagatgcaat 4402  T
Q  117 tgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttcctt 215  Q
    ||| |||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  4403 tgatttgcttctgatgtgcaattcagaattggatacgcagcggagtaaaaacagagtaagagagaagaaagaaagacagaggcaattatactggttcctt 4502  T
Q  216 ccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| ||||||||| ||||||| ||||    
T  4503 ccacaaaccggaagtagtccagtcccccttgc 4534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 78)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 25112829 - 25112618
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||||||||||| |||| || |||||| ||||| |||||||||| |||||||||||||||||||||||||| ||||||    
T  25112829 gaattgtgttttctttttctcaagatgaaatcttcttctgaggtcacttcagaagctgtttgaaaatgcttctgatgtgatgacacttcagaggcaattg 25112730  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    |||| ||||||||||||| | || ||| ||||   || |||||||||| |||||| || ||||||||||||||||||  ||||||||| |||||||||||    
T  25112729 acttacttctgatgtgcagttcataataggatgcacaacggaataaaatagagtatgaaagaagaaagaaagacacaagcaattatacaggttccttcca 25112630  T
Q  219 caaaccagaagt 230  Q
    |||| |||||||    
T  25112629 caaatcagaagt 25112618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 25171920 - 25171709
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||||||||||| |||| || |||||| ||||| |||||||||| |||||||||||||||||||||||||| ||||||    
T  25171920 gaattgtgttttctttttctcaagatgaaatcttcttctgaggtcacttcagaagctgtttgaaaatgcttctgatgtgatgacacttcagaggcaattg 25171821  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    |||| ||||||||||||| | || ||| ||||   || |||||||||| |||||| || ||||||||||||||||||  ||||||||| |||||||||||    
T  25171820 acttacttctgatgtgcagttcataataggatgcacaacggaataaaatagagtatgaaagaagaaagaaagacacaagcaattatacaggttccttcca 25171721  T
Q  219 caaaccagaagt 230  Q
    |||| |||||||    
T  25171720 caaatcagaagt 25171709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 20216067 - 20215839
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| ||||||| |||| | ||||||| ||||| ||||  | |  |||||||||||||| | ||||||||  |||||     
T  20216067 gaattgtgttttctttttctcaagataaaatcttcttctgatatcacttcagaagctgttaaagagtgcttctgatgtgataatacttcagatgcaatta 20215968  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | |||||||||||||| | | |||||||||||| |||||||| ||||| ||||||| ||||||||||||| |||||||  ||||||||||||||||||||    
T  20215967 aattgcttctgatgtgtagttcagaattggatacgcagcggagtaaaaacagagta-gagagaagaaagagagacacaagcaattatactggttccttcc 20215869  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||||| ||||||| ||||    
T  20215868 acaaaccggaagtagtccagtcccccttgc 20215839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 40227844 - 40228072
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| ||||||||| |   |||||| |||| | ||||||| ||||| ||||| | |  ||||||||||| || | ||||||||  |||||     
T  40227844 gaattgtgttttctttttctcaaaaatgaatcttcttctgatatcacttcagaagctgtttaagagtgcttctgatgtaataatacttcagatgcaatta 40227943  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | ||| ||||||||||   | |||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  40227944 aattgtttctgatgtgttgttcagaatcggatacgcagcggagtaaaaacagag-aagagagaagaaagaaagacacaagcaattatactggttccttcc 40228042  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    |||||| |||||||||| ||||||| ||||    
T  40228043 acaaactagaagtagtccagtcccccttgc 40228072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 23477646 - 23477784
Alignment:
Q  102 cacttcagagacaattgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaat 201  Q
    |||||||||  ||| |||||||||||||||||||| | |||||  ||||| |||||||| |||||||||||| ||||||||||||| |||||||  ||||    
T  23477646 cacttcagatgcaaatgacttgcttctgatgtgcagttcagaaaaggatatgcagcggagtaaaacagagta-gagagaagaaagagagacacaagcaat 23477744  T
Q  202 tatactggttccttccacaaaccagaagtagtctagtccc 241  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  23477745 tatactggttccttccacaaaccggaagtagtccagtccc 23477784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 247
Target Start/End: Complemental strand, 40033661 - 40033461
Alignment:
Q  47 aatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaatt 146  Q
    |||||| |||| | ||||||||||||| ||||| | |  |||||||||||||| | ||||||||  ||||| | |||||||||||||    | ||||||     
T  40033661 aatcttcttctgatatcactttagaagctgtttaagagtgcttctgatgtgataatacttcagatgcaattaaattgcttctgatgtattgttcagaatc 40033562  T
Q  147 ggataagcagcggaataaaac-agagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtccccttt 245  Q
    ||||| |||||||| |||||  |||||| |||| |||||||| |||||||  ||||||||||||||||||||||||||| ||||||||| ||||||| ||    
T  40033561 ggatacgcagcggagtaaaaatagagta-gagaaaagaaagagagacacaagcaattatactggttccttccacaaaccggaagtagtccagtccccctt 40033463  T
Q  246 gc 247  Q
    ||    
T  40033462 gc 40033461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 32160055 - 32160145
Alignment:
Q  140 cagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagt 230  Q
    |||||||||||   ||||||| ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||| |||||    
T  32160055 cagaattggatgcacagcggagtaaaacagagtaagagagaagaaagaaagacacatgcaattatacaggttccttccacaaaccggaagt 32160145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 123 - 247
Target Start/End: Original strand, 23487843 - 23487966
Alignment:
Q  123 gcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaa 222  Q
    |||||||||||||| | | |||  ||||| | |||||| |||||||||||| ||||||| ||||| |||||||  |||||||||||||||||||||||||    
T  23487843 gcttctgatgtgcagttcggaaaaggatatgaagcggagtaaaacagagta-gagagaataaagagagacacaagcaattatactggttccttccacaaa 23487941  T
Q  223 ccagaagtagtctagtcccctttgc 247  Q
    || ||||||||| ||||||| ||||    
T  23487942 ccggaagtagtccagtcccccttgc 23487966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 1914632 - 1914860
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||  ||||||||| |  ||||||| |||| | ||||||| ||||| ||||  | |  |||||||||||||| | ||||||||  |||||     
T  1914632 gaattgtgttttttttttctcaaaaa-aaatcttattctgatatcacttcagaagctgttgaagagtgcttctgatgtgataatacttcagatgcaatta 1914730  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaa--cagagtaagagagaagaaagaaagacacagacaattatactggttccttc 216  Q
    | |||||||||||||    | |||||| ||||| |||||||| |||||  ||||||| |||| |||||||| |||||||  |||||||| ||||||||||    
T  1914731 aattgcttctgatgtattgttcagaatcggatacgcagcggagtaaaaaacagagta-gagaaaagaaagagagacacaagcaattatattggttccttc 1914829  T
Q  217 cacaaaccagaagtagtctagtcccctttgc 247  Q
    || ||||| ||||||||| ||||||| ||||    
T  1914830 cataaaccggaagtagtccagtcccccttgc 1914860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 20625595 - 20625497
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  20625595 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtctagtcccccttgc 20625497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 106948 - 106850
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||| || ||||||||| ||||||| ||||    
T  106948 gatatgcagcggaataaaacagagca-gagaaaagaaagaaagacacaagcaattatcctggttccttccacaatccggaagtagtccagtcccccttgc 106850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 32159967 - 32160058
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcaga 110  Q
    ||||||||||||| ||||| |||||| ||||||| |||| || |||||| ||||| ||||  ||||||||||||||||||||||||||||||    
T  32159967 gaattgtgttttctttttcccaagataaaatcttcttctgaggtcacttcagaagctgttgaaaaacgcttctgatgtgatgacacttcaga 32160058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 13533271 - 13533396
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||||||| ||||||| |||| |||||||| |||||||  ||||||| |||||||||||||||    
T  13533271 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaaacagagta-gagaaaagaaagagagacacaagcaattatcctggttccttccaca 13533369  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||| ||||||| ||||    
T  13533370 aaccggaagtagtccagtcccccttgc 13533396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 20168869 - 20168770
Alignment:
Q  148 gataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    |||| |||||||||||||| ||||||| |||| |||||||| ||||| |  ||||||| ||||||||||||||||||| ||||||||||||||||| |||    
T  20168869 gatacgcagcggaataaaaacagagta-gagaaaagaaagagagacataagcaattatcctggttccttccacaaaccggaagtagtctagtcccccttg 20168771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 21420194 - 21420292
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||| ||||||||||||||| | |||| ||||||||||||||||  ||||||| |||||||||||||||| || ||||||||| ||||||| ||||    
T  21420194 gatatgcaacggaataaaacagagca-gagaaaagaaagaaagacacaagcaattatcctggttccttccacaatccggaagtagtccagtcccccttgc 21420292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 11208823 - 11208749
Alignment:
Q  157 cggaataaaacagagtaagagagaagaaagaaagacacagacaa-ttatactggttccttccacaaaccagaagt 230  Q
    |||||||||||||||||||||| ||||||||||||||||  ||| |||||| ||||||||||||||||| |||||    
T  11208823 cggaataaaacagagtaagagaaaagaaagaaagacacatgcaatttatacaggttccttccacaaaccggaagt 11208749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 13522514 - 13522639
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||||||| ||||||| |||| || ||||| |||||||  ||||||| |||||||||||||||    
T  13522514 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaaacagagta-gagaaaataaagagagacacaagcaattatcctggttccttccaca 13522612  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||| ||||||| ||||    
T  13522613 aaccggaagtagtccagtcccccttgc 13522639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 36096480 - 36096355
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | |||||||||||| |||||||||||||| ||||||| |||| |||||| | |||||||  ||||||| |||||||||||||||    
T  36096480 tgcttctgatgtgatgttcagaattggatacgcagcggaataaaaacagagta-gagaaaagaaacagagacacaagcaattatcctggttccttccaca 36096382  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    || | ||||||||  ||||||| ||||    
T  36096381 aatcggaagtagttcagtcccccttgc 36096355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 36097937 - 36097812
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | |||||||||||| |||||||||||||| ||||||| |||| |||||| | |||||||  ||||||| |||||||||||||||    
T  36097937 tgcttctgatgtgatgttcagaattggatacgcagcggaataaaaacagagta-gagaaaagaaacagagacacaagcaattatcctggttccttccaca 36097839  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    || | ||||||||  ||||||| ||||    
T  36097838 aatcggaagtagttcagtcccccttgc 36097812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 23487775 - 23487854
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttg-aaaacgcttctgatgtg 97  Q
    ||||||||||||| ||||||||| || ||||||| |||| ||||||||| ||||| |||||| |||||||||||||||||    
T  23487775 gaattgtgttttctttttctcaatataaaatcttcttctgagatcacttaagaagctgtttgaaaaacgcttctgatgtg 23487854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 22000824 - 22000750
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| |||||||||||| | ||||||||| |||| ||||||||||||||||||||||| |||||| ||||    
T  22000824 agagagaaggaagaaagacacaaagcaattatacaggtttcttccacaaaccagaagtagtcttgtcccccttgc 22000750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 35543957 - 35543831
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagta-agagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||| |||| ||| |||||||||| | ||   ||||| |||||||| |||||||  ||||||| |||||||||||||||    
T  35543957 tgcttctgatgtgatgttcagaattagatacgcaacggaataaaaaatagagcagagaaaagaaagagagacacaagcaattatcctggttccttccaca 35543858  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||| ||||||| ||||    
T  35543857 aaccggaagtagtccagtcccccttgc 35543831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 21659578 - 21659627
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  21659578 caattatactggttccttccacaaaccggaagtagtctagtcccccttgc 21659627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 26766633 - 26766558
Alignment:
Q  173 aagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||||||| |||||| ||||    
T  26766633 aagagagaaagaagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgc 26766558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 7746491 - 7746417
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||||||| |||||| ||||    
T  7746491 agagagaaagaagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgc 7746417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 20417706 - 20417633
Alignment:
Q  174 agagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| |||||||| ||||| |  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  20417706 agagaaaagaaagagagacataagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 20417633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 21075970 - 21075907
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    |||||||||||| | ||||||||| | ||||||||||||||| |||||||||| ||||||||||    
T  21075970 aagaaagacacaaaacaattatacagattccttccacaaaccggaagtagtcttgtcccctttg 21075907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 13546317 - 13546244
Alignment:
Q  175 gagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  13546317 gagagaaagaagaaagacacaaaacaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 13546244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 17607884 - 17607789
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||||||||||||||||||||  | ||||||||| ||||||| ||||    
T  17607884 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatactggttccttccacaacacggaagtagtccagtcccccttgc 17607789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 17618499 - 17618404
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||||||||||||||||||||  | ||||||||| ||||||| ||||    
T  17618499 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatactggttccttccacaacacggaagtagtccagtcccccttgc 17618404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 31349358 - 31349263
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  |||||||||||| |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  31349358 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacagacagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 31349263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 31359972 - 31359877
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  |||||||||||| |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  31359972 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacagacagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 31359877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 31487578 - 31487635
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt 230  Q
    |||||||| ||||||||||||| | ||||||||| ||||||||||||| |||||||||    
T  31487578 agagagaaaaaagaaagacacaaaacaattatacaggttccttccacagaccagaagt 31487635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 17814285 - 17814361
Alignment:
Q  152 agcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt 230  Q
    ||||||||| ||||||||||  ||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||    
T  17814285 agcagcgga-taaaacagag--agagagaaagaagaaagacacaaagcaattatacaggttccttccacaaaccggaagt 17814361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 21199787 - 21199723
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||| ||||| ||||||||||||||||| |||||||||| |||||| ||||    
T  21199787 aagaaagacacaaaacaaatatacaggttccttccacaaaccggaagtagtcttgtcccccttgc 21199723  T

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Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 31146390 - 31146343
Alignment:
Q  184 aagaaagacacagacaatt-atactggttccttccacaaaccagaagt 230  Q
    ||||||||||||| ||||| |||||||||||||||||||||| |||||    
T  31146390 aagaaagacacaggcaatttatactggttccttccacaaaccggaagt 31146343  T

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Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 34063409 - 34063350
Alignment:
Q  188 aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||| ||| |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  34063409 aagacacaaacagttatcctggttccttccacaaaacggaagtagtccagtcccccttgc 34063350  T

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Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 26056273 - 26056215
Alignment:
Q  185 agaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
    ||||||||||| | |||||||  ||||||||||||||| |||||||||||| |||||||    
T  26056273 agaaagacacaaagcaattatcttggttccttccacaatccagaagtagtccagtcccc 26056215  T

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Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 30069326 - 30069434
Alignment:
Q  140 cagaattggataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctag 237  Q
    ||||||| |||| ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||  | ||||||||| ||    
T  30069326 cagaattagatatgcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaacacggaagtagtccag 30069424  T
Q  238 tcccctttgc 247  Q
    ||||| ||||    
T  30069425 tcccccttgc 30069434  T

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Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 34772747 - 34772639
Alignment:
Q  140 cagaattggataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctag 237  Q
    ||||||| |||| ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||  | ||||||||| ||    
T  34772747 cagaattagatatgcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaacacggaagtagtccag 34772649  T
Q  238 tcccctttgc 247  Q
    ||||| ||||    
T  34772648 tcccccttgc 34772639  T

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Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 34783692 - 34783584
Alignment:
Q  140 cagaattggataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctag 237  Q
    ||||||| |||| ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||  | ||||||||| ||    
T  34783692 cagaattagatatgcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaacacggaagtagtccag 34783594  T
Q  238 tcccctttgc 247  Q
    ||||| ||||    
T  34783593 tcccccttgc 34783584  T

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Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 90195 - 90146
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  90195 caattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 90146  T

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Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 1108580 - 1108675
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  1108580 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 1108675  T

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Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 1121338 - 1121433
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  1121338 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 1121433  T

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Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 6498653 - 6498710
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt 230  Q
    ||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||    
T  6498653 agagagaaagaagaaagacacaaagcaattatacaggttccttccacaaaccggaagt 6498710  T

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Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 9376897 - 9376992
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  9376897 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 9376992  T

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Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 14030869 - 14030774
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  14030869 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 14030774  T

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Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 14041422 - 14041327
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  14041422 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 14041327  T

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Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 15693467 - 15693562
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  15693467 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 15693562  T

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Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 15740793 - 15740698
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  15740793 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 15740698  T

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Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 15769953 - 15769858
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  15769953 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 15769858  T

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Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 17719742 - 17719647
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  17719742 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 17719647  T

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Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 17730394 - 17730299
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  17730394 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 17730299  T

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Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 22157929 - 22157834
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||||| |||| ||||||||  ||||||||  || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  22157929 gcagcggaaaagaacagagta-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 22157834  T

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Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 24567914 - 24567819
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  24567914 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 24567819  T

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Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 24816321 - 24816416
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  24816321 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 24816416  T

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Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 24826909 - 24827004
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  24826909 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 24827004  T

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Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 25097611 - 25097562
Alignment:
Q  186 gaaagacacaga-caattatactggttccttccacaaaccagaagtagtc 234  Q
    |||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  25097611 gaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtc 25097562  T

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Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 25155581 - 25155532
Alignment:
Q  186 gaaagacacaga-caattatactggttccttccacaaaccagaagtagtc 234  Q
    |||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  25155581 gaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtc 25155532  T

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Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 27460986 - 27460891
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  27460986 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 27460891  T

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Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 27471385 - 27471290
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  27471385 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 27471290  T

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Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 31117208 - 31117293
Alignment:
Q  163 aaaacagagtaagagagaagaaagaaagacacagacaa-ttatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||  ||||||||  |||||||||||| |  | |||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  31117208 aaaacagagagagagagaaagaagaaagacacaaagtagttatacaggttccttccacaaaccggaagtagtcctgtcccccttgc 31117293  T

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Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 32753403 - 32753476
Alignment:
Q  174 agagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| ||||| || |||||||  ||||||| ||| ||||||||||||||  ||||||||| ||||||| ||||    
T  32753403 agagaaaagaaggagagacacaagcaattatcctgattccttccacaaactggaagtagtccagtcccccttgc 32753476  T

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Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 36688519 - 36688424
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  36688519 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 36688424  T

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Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 36699085 - 36698990
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  36699085 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 36698990  T

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Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 8522635 - 8522571
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  8522635 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 8522571  T

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Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 19464761 - 19464701
Alignment:
Q  187 aaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  19464761 aaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 19464701  T

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Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 19478791 - 19478731
Alignment:
Q  187 aaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  19478791 aaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 19478731  T

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Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 20552609 - 20552545
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  20552609 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 20552545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 20798489 - 20798425
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  20798489 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 20798425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 23407239 - 23407175
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  23407239 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 23407175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 23477602 - 23477650
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactt 67  Q
    ||||||||||||| | ||||||| || ||||||| ||||||||||||||    
T  23477602 gaattgtgttttcttgttctcaatataaaatcttcttctaagatcactt 23477650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 24925604 - 24925668
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  24925604 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 24925668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 24982885 - 24982949
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  24982885 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 24982949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 26119318 - 26119274
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
    |||||||  ||||||||||||||| || |||||||||||||||||    
T  26119318 caattatcatggttccttccacaatccggaagtagtctagtcccc 26119274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 36085254 - 36085190
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  36085254 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 36085190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 36229532 - 36229468
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  36229532 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 36229468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 42395777 - 42395713
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  42395777 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 42395713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1507 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold1507
Description:

Target: scaffold1507; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 273 - 42
Alignment:
Q  19 gaattgtgttttcattttctcaaga--tgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaat 116  Q
    ||||||||||||| ||||||||| |  |  |||||| |||| | ||||||| ||||| ||||| | || |||||||||||||| ||||||||||  ||||    
T  273 gaattgtgttttctttttctcaaaaaatataatcttcttctgatatcacttcagaagctgtttaagaatgcttctgatgtgataacacttcagatgcaat 174  T
Q  117 tgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaac-agagtaagagagaagaaagaaagacacagacaattatactggttcctt 215  Q
    ||| ||||||||||||||||||  ||||||||||| |||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  173 tgatttgcttctgatgtgcaatttagaattggatacgcagcggagtaaaaatagagtaagagagaagaaagaaagacacaggcaattatactggttcctt 74  T
Q  216 ccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| ||||||||| ||||||| ||||    
T  73 ccacaaaccggaagtagtccagtcccccttgc 42  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 2706 - 2501
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| ||||| |||||| ||||||| |||| || |||||| ||||| ||||  ||||||||||||||||||||||||||||||| || |||    
T  2706 gaattgtgttttctttttcccaagataaaatcttcttctgaggtcacttcagaagctgttgaaaaacgcttctgatgtgatgacacttcagaggcagttg 2607  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    |||||||||||||||| | | |||||||||||   || | || ||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  2606 acttgcttctgatgtgtagttcagaattggatgcacaacagagtaaaatagagtaagagagaagaaagaaatacacaggcaattatactggttccttcca 2507  T
Q  219 caaacc 224  Q
    ||||||    
T  2506 caaacc 2501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 165554 - 165343
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| ||||| |||||| ||||||| |||| || |||||| ||||| ||||  |||| | ||||||||||||||||||| |||| || |||    
T  165554 gaattgtgttttctttttcccaagataaaatcttcttctgaggtcacttcagaagctgttgaaaaatgattctgatgtgatgacacttgagaggcagttg 165455  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    |||||||||||||||||| | |||||||||||   ||||||| ||||| ||||||||| ||||||||||||||||||| |||||||||  ||||||||||    
T  165454 acttgcttctgatgtgcagttcagaattggatgcacagcggagtaaaatagagtaagatagaagaaagaaagacacaggcaattatacaagttccttcca 165355  T
Q  219 caaaccagaagt 230  Q
    |||||| |||||    
T  165354 caaaccggaagt 165343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 399 - 188
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    |||||||| |||| ||||| |||||| ||||||| |||| || |||||| ||||| ||||  ||||||||||||||||||||| ||||||||| || |||    
T  399 gaattgtgctttctttttcccaagataaaatcttcttctgaggtcacttcagaagctgttgaaaaacgcttctgatgtgatgaaacttcagaggcagttg 300  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    |||||||||||||||||| | |||||||  ||   |||| || ||||| |||||||||||||||||||||||| |||  ||||||||| |||||||||||    
T  299 acttgcttctgatgtgcagttcagaattaaatgcacagcagagtaaaatagagtaagagagaagaaagaaagagacatgcaattatacaggttccttcca 200  T
Q  219 caaaccagaagt 230  Q
    |||||| |||||    
T  199 caaaccggaagt 188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 11087973 - 11087745
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||| ||||||| ||||||||| || ||||||| |||| | ||||||| ||||| ||||| | |  |||||||||||||| | ||||||||  |||||     
T  11087973 gaattttgttttctttttctcaatataaaatcttcttctgatatcacttcagaagctgtttaagagtgcttctgatgtgataatacttcagatgcaatta 11087874  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaat-aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | |||||||||||||  | | |||||||||||| |||||||| | |||||||||| |||||||||||||| |||||||  |||||||| |||||||||||    
T  11087873 aattgcttctgatgtaaagttcagaattggatacgcagcggagtaaaaacagagt-agagagaagaaagagagacacaagcaattatattggttccttcc 11087775  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||||| ||||||| ||||    
T  11087774 acaaaccggaagtagtccagtcccccttgc 11087745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 4433414 - 4433300
Alignment:
Q  116 ttgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttcctt 215  Q
    |||| |||||||||||||||| | |||| |  |||   ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  4433414 ttgaattgcttctgatgtgcagttcagattcagatgcacagcggagtaaaacagagtaagagagaagaaagaaagacacaggcaattatacaggttcctt 4433315  T
Q  216 ccacaaaccagaagt 230  Q
    ||||||||| |||||    
T  4433314 ccacaaaccggaagt 4433300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 4412842 - 4412728
Alignment:
Q  116 ttgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttcctt 215  Q
    |||| |||||||||||||||| | |||| |  |||   || |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  4412842 ttgaattgcttctgatgtgcagttcagattcagatgcacaacggagtaaaacagagtaagagagaagaaagaaagacacaggcaattatacaggttcctt 4412743  T
Q  216 ccacaaaccagaagt 230  Q
    ||||||||| |||||    
T  4412742 ccacaaaccggaagt 4412728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 15215801 - 15215925
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||  |||| ||||||||||||||||||||| |||| ||||||||| ||||||  ||||||| ||||||||||||||||    
T  15215801 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaacagagta-gagaaaagaaagaaggacacaagcaattatcctggttccttccacaa 15215899  T
Q  222 accagaagtagtctagtcccctttgc 247  Q
    ||| ||||||||| ||||||| ||||    
T  15215900 accggaagtagtccagtcccccttgc 15215925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 18440680 - 18440804
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||| |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||    
T  18440680 tgcttctgatgtgatgttcagaattagatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaa 18440778  T
Q  222 accagaagtagtctagtcccctttgc 247  Q
    ||| ||||||||| ||||||| ||||    
T  18440779 accggaagtagtccagtcccccttgc 18440804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 247
Target Start/End: Complemental strand, 3477122 - 3477031
Alignment:
Q  155 agcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||||||||||||| |||| ||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  3477122 agcggaataaaacagagta-gagaaaagaaagaaagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 3477031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 13175533 - 13175306
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||| ||||| ||||| ||| |  ||||||| |||| | ||||||| ||||| ||||| | |  |||||||||||||| | |||| |||  |||||     
T  13175533 gaattgtcttttctttttcccaaaaaaaaatcttcttctgatatcacttcagaagctgtttaagagtgcttctgatgtgataatactt-agatgcaatta 13175435  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataa-aacagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | |||||||||| ||  | | |||||| ||||| ||||| || ||| |||||| || | ||||||||||| | |||||  ||||||||||||||||||||    
T  13175434 aattgcttctgacgtcaagttcagaatcggatacgcagcagattaacaacagattagg-gagaagaaagagaaacacaagcaattatactggttccttcc 13175336  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||||| ||||||| ||||    
T  13175335 acaaaccggaagtagtccagtcccccttgc 13175306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 17064344 - 17064220
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||  |||| ||||||||||||||||||| | |||| ||||||||||||||||  ||||||| ||||||||||||||||    
T  17064344 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaacagagca-gagaaaagaaagaaagacacaagcaattatcctggttccttccacaa 17064246  T
Q  222 accagaagtagtctagtcccctttgc 247  Q
    | | ||||||||| | ||||| ||||    
T  17064245 aacggaagtagtccattcccccttgc 17064220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 38404027 - 38403903
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||  |||| |||||||||||||||| || | |||| |||||||| |||||||  ||||||| ||||||||||||||||    
T  38404027 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaacatagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaa 38403929  T
Q  222 accagaagtagtctagtcccctttgc 247  Q
    ||| ||||||||| ||||||| ||||    
T  38403928 accggaagtagtccagtcccccttgc 38403903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 6045071 - 6044973
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  |||||||  |||||||||||||||||| ||||||||| ||||||| ||||    
T  6045071 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcatggttccttccacaaaccggaagtagtccagtcccccttgc 6044973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 13681832 - 13681927
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctt 244  Q
    |||| ||||| ||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  13681832 gatatgcagcagaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagacccctt 13681927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 48381697 - 48381795
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| |||||||||||||||||||  ||||| |||||||| |||||||  ||||||| || ||||||| |||||||| ||||||||| ||||||| ||||    
T  48381697 gatatgcagcggaataaaacagag-cagagaaaagaaagagagacacaagcaattatcctagttcctttcacaaaccggaagtagtccagtcccccttgc 48381795  T

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Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 8933048 - 8933173
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaat-aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||| ||||||||  | |||| |||||||| |||||||  ||||||| |||||||||||||||    
T  8933048 tgcttctgatgtgatgttcagaatcagatatgcagcggaatgaaaacagaaca-gagaaaagaaagagagacacaagcaattatcctggttccttccaca 8933146  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||| ||||||| ||||    
T  8933147 aaccggaagtagtccagtcccccttgc 8933173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 247
Target Start/End: Complemental strand, 8999837 - 8999636
Alignment:
Q  46 aaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaat 145  Q
    ||||||| |||| | ||||||| ||||| ||||||| |  |||||||||||||| | ||||||||  ||||| | ||||||||||| |    | || |||    
T  8999837 aaatcttcttctgatatcacttcagaagctgtttgacagtgcttctgatgtgataatacttcagatgcaattaaattgcttctgatatattgttcaaaat 8999738  T
Q  146 tggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctt 244  Q
     ||||| ||| | || ||||| |||||||  | | |||||||| |||||||  ||||||||||| ||||||||||||||| ||||||||| ||||||| |    
T  8999737 cggatacgcaacagagtaaaaacagagtac-ataaaagaaagagagacacaagcaattatactgattccttccacaaaccggaagtagtccagtccccct 8999639  T
Q  245 tgc 247  Q
    |||    
T  8999638 tgc 8999636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 12734928 - 12734855
Alignment:
Q  174 agagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  12734928 agagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 12734855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 26210312 - 26210239
Alignment:
Q  174 agagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  26210312 agagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 26210239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 29589524 - 29589597
Alignment:
Q  174 agagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  29589524 agagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 29589597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 4820826 - 4820900
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  4820826 agagagaaggaagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcctgtcccccttgc 4820900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 24883210 - 24883085
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | || |||| |||| |||||||||||||| ||||| | |||| |||||||| |||||||  ||||||| | |||||||||||||    
T  24883210 tgcttctgatgtgatgttcataattagatatgcagcggaataaaaacagagca-gagaaaagaaagagagacacaagcaattatcccggttccttccaca 24883112  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    || | ||||||||| ||||||| ||||    
T  24883111 aatcggaagtagtccagtcccccttgc 24883085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 19711804 - 19711755
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  19711804 caattatactggttccttccataaaccagaagtagtccagtcccccttgc 19711755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 33604246 - 33604315
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
    ||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||||||| ||||||    
T  33604246 agagagaaagaagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccc 33604315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 11792259 - 11792323
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||| |||||| ||||    
T  11792259 aagaaagacacaaaacaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgc 11792323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 13302199 - 13302274
Alignment:
Q  173 aagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  13302199 aagagagaaagaagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 13302274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 18418673 - 18418723
Alignment:
Q  197 acaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  18418673 acaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 18418723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 19237829 - 19237779
Alignment:
Q  197 acaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||| ||||||||||||||||| |||||||||| |||||| ||||    
T  19237829 acaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgc 19237779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 12468624 - 12468685
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctt 244  Q
    ||||||||||||| | |||||| ||||||||||||| || || ||||||||||||| |||||    
T  12468624 aaagaaagacacaaataattattctggttccttccataatccggaagtagtctagtaccctt 12468685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 29936153 - 29936092
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctt 244  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  ||||||||    
T  29936153 aagaaagacacaaaacaattatacaggttccttccacaaaccggaagtagtcctgtcccctt 29936092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 44280039 - 44280134
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||| ||||||||||| ||||||| ||||    
T  44280039 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaatcagaagtagtccagtcccccttgc 44280134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 9159277 - 9159341
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| |||||||| ||| |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  9159277 aaagcaagacacaaacagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 9159341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 16310715 - 16310651
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  16310715 aagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 16310651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 21211352 - 21211288
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | |||||||||  |||||||||||||||| |||||||||| |||||| ||||    
T  21211352 aagaaagacacaaagcaattatacaagttccttccacaaaccggaagtagtcttgtcccccttgc 21211288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 1559950 - 1559863
Alignment:
Q  46 aaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattgacttgcttctgatgt 133  Q
    ||||||| |||| | ||||||| ||||| ||||||| |  |||||||||||||| | ||||||||  ||||| | |||||||||||||    
T  1559950 aaatcttcttctgatatcacttcagaagctgtttgagagtgcttctgatgtgataatacttcagatgcaattaaattgcttctgatgt 1559863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 39285311 - 39285260
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtc 234  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  39285311 aagaaagacacaaaacaattatacaggttccttccacaaaccggaagtagtc 39285260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 3779451 - 3779384
Alignment:
Q  173 aagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
    |||||||||||||||  |||||| ||||||||  |||||| |||||||| |||||||||||  |||||||    
T  3779451 aagagagaagaaaga--gacacaaacaattatcttggttctttccacaatccagaagtagttcagtcccc 3779384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 14187028 - 14187102
Alignment:
Q  174 agagagaagaaagaaagacacagacaa-ttatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||||||||| | || |||||| ||||||||||||||| | |||||||||| |||||| ||||    
T  14187028 agagagaaagaagaaagacacaaagaaattatacaggttccttccacaaatcggaagtagtcttgtcccccttgc 14187102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 19986318 - 19986210
Alignment:
Q  140 cagaattggataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctag 237  Q
    ||||||| |||| ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||  | ||||||||| ||    
T  19986318 cagaattagatatgcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaacacggaagtagtccag 19986220  T
Q  238 tcccctttgc 247  Q
    ||||| ||||    
T  19986219 tcccccttgc 19986210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 25212598 - 25212540
Alignment:
Q  189 agacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||| |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  25212598 agacacaaacagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 25212540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 3165250 - 3165345
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  3165250 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 3165345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 7488693 - 7488652
Alignment:
Q  201 ttatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
    ||||| |||||||||||||||||| ||||||||| |||||||    
T  7488693 ttatagtggttccttccacaaaccggaagtagtccagtcccc 7488652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 9169732 - 9169796
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  9169732 aaagcaagacacaancagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 9169796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 16105735 - 16105686
Alignment:
Q  185 agaaagacacagacaattatactggttccttccacaaaccagaagtagtc 234  Q
    |||||||||||  ||||||||| |||||||||||||| || |||||||||    
T  16105735 agaaagacacaagcaattatacaggttccttccacaatccggaagtagtc 16105686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 20490522 - 20490617
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  20490522 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaaacggaagtagtccagtcccccttgc 20490617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 21003793 - 21003698
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||||| |||| ||||||||  ||||||||  || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  21003793 gcagcggaaaagaacagagta-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 21003698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 44466443 - 44466508
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagt-agtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||||| ||||| ||||| |||||| ||||    
T  44466443 aagaaagacacaaagcaattatacaggttccttccacaaaccggaagtcagtcttgtcccccttgc 44466508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 588759 - 588823
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  588759 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 588823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 5001634 - 5001570
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||| |  ||||||||| |||||| ||||    
T  5001634 aagaaagacacaaagcaattatacaggttccttccacaaatcgaaagtagtcttgtcccccttgc 5001570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 15871830 - 15871782
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    ||||||| |||||||||||||||| |  ||||||||| |||||||||||    
T  15871830 caattatcctggttccttccacaatctggaagtagtccagtcccctttg 15871782  T

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Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 15889082 - 15889018
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  15889082 aaagcaagacacaagcagttatcctggttccttccacaaaacggaagtagtccagtcccccttgc 15889018  T

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Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 24787681 - 24787749
Alignment:
Q  152 agcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaa 222  Q
    ||||||||| ||||||||||  ||||||||  |||||||||||| | ||||||||| |||||||||||||||    
T  24787681 agcagcgga-taaaacagag--agagagaaagaagaaagacacacaacaattatacaggttccttccacaaa 24787749  T

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Target: scaffold0017 (Bit Score: 82; Significance: 8e-39; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 59775 - 59558
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| ||||||||  |  ||||||| |||| | ||||||| ||||| ||||||| |  |||||||||||||| | ||||||||  |||||     
T  59775 gaattgtgttttctttttctcagaa--aaatcttcttctgatatcacttcagaagctgtttgagagtgcttctgatgtgataatacttcagatgcaatta 59678  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    | |||||| ||||||    | ||||||  |||| |||||||| |||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||    
T  59677 aattgcttttgatgtattgttcagaatctgatacgcagcggagtaaaacagagta-gagagaagaaagagagacacaaacaattatactggttccttcca 59579  T
Q  219 caaaccagaagtagtctagtc 239  Q
    |||||||||||||||| ||||    
T  59578 caaaccagaagtagtccagtc 59558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 41231 - 41006
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| ||||||||| |  ||||||| |||| | ||||||||||| | ||||||| |  |||||||||||||| | ||||||||  |||||     
T  41231 gaattgtgttttctttttctcaaaa--aaatcttcttctgatatcactttagaggctgtttgagagtgcttctgatgtgataatacttcagatgcaatta 41134  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    | |||||| ||||||    | ||||||  |||| |||||||| |||||||||||| | || |||||||| |||||||  |||||||||||||||||||||    
T  41133 aattgcttatgatgtattgttcagaatctgatacgcagcggagtaaaacagagta-gcgaaaagaaagagagacacaagcaattatactggttccttcca 41035  T
Q  219 caaaccagaagtagtctagtcccctttgc 247  Q
    |||||| ||||||||||||||||| ||||    
T  41034 caaaccggaagtagtctagtcccccttgc 41006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 174862 - 174986
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | ||||||  |||| ||||||||||||||||||| | |||  |||||||| |||||||  ||||||| ||||||||||||||||    
T  174862 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaacagagca-gaggaaagaaagagagacacaagcaattatcctggttccttccacaa 174960  T
Q  222 accagaagtagtctagtcccctttgc 247  Q
    ||| ||||||||| ||||||| ||||    
T  174961 accggaagtagtccagtcccccttgc 174986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 60920 - 61148
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||| |||| |  ||||||| |||| ||||||||||||||| ||||| | |  |||||||||||||| | ||||||||  |||||     
T  60920 gaattgtgttttctttttgtcaaaaaaaaatcttattctgagatcactttagaagctgtttaagagtgcttctgatgtgataatacttcagatgcaatta 61019  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | ||||| || |||||   | |||||| ||||| |||||||| ||||| ||||||| ||||||||||||| |||||||  ||||||||||||||||||||    
T  61020 aattgctccttatgtgttgttcagaatcggatacgcagcggagtaaaaacagagta-gagagaagaaagagagacacaagcaattatactggttccttcc 61118  T
Q  218 acaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||||| ||||||| ||||    
T  61119 acaaaccggaagtagtccagtcccccttgc 61148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 39008 - 38796
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| ||||| ||| || ||||||| |||| || |||||| ||||  ||||  ||||||||||||||||||||||||||| ||  || |||    
T  39008 gaattgtgttttctttttcccaaaataaaatcttcttctgaggtcacttcagaaactgttgaaaaacgcttctgatgtgatgacacttctgaagcagttg 38909  T
Q  119 acttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttcc 217  Q
    | |||||||||||||| | |  ||| |  |||   ||||||| ||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  38908 aattgcttctgatgtggagttaagattcagatgcacagcggagtaaaaacagagtaagagagaagaaagaaagacacaggcaattatacaggttccttcc 38809  T
Q  218 acaaaccagaagt 230  Q
    ||||||| |||||    
T  38808 acaaaccggaagt 38796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1820 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold1820
Description:

Target: scaffold1820; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 1024 - 1234
Alignment:
Q  20 aattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattga 119  Q
    |||| ||||||| ||||| |||||| ||||||| |||| || | ||||  |||  ||||  | |||||||||||||||| |||||| ||||  || ||||    
T  1024 aattatgttttctttttcccaagataaaatcttcttctgaggttacttcggaaactgttgaagaacgcttctgatgtgaagacactccagaagcagttga 1123  T
Q  120 cttgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccac 219  Q
     |||||||||||||||| | ||||    |||   ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1124 attgcttctgatgtgcagttcagatacagatgcacagcggagtaaaacagagtaagagagaagaaagaaagacacagacaattatacaggttccttccac 1223  T
Q  220 aaaccagaagt 230  Q
    ||||| |||||    
T  1224 aaaccggaagt 1234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1820; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 912 - 965
Alignment:
Q  83 aacgcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgca 136  Q
    |||||||||||||||| |||||| ||||  || |||| ||||||||||||||||    
T  912 aacgcttctgatgtgaagacactccagaagcagttgaattgcttctgatgtgca 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 34911 - 35022
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    ||||||||||||||| | |||||||||||| |||||||| |||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  34911 tgcttctgatgtgcagttcagaattggatatgcagcggagtaaaacagagta-gagagaagaaagagagacacaggcaattatactggttccttccacaa 35009  T
Q  222 accagaagtagtc 234  Q
    |||  ||||||||    
T  35010 accgaaagtagtc 35022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 34842 - 34907
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaa 84  Q
    ||||||||||||| |||||||||||| ||||||| |||| ||||||||| ||||| ||||||||||    
T  34842 gaattgtgttttctttttctcaagatcaaatcttcttctgagatcacttcagaagctgtttgaaaa 34907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1321 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold1321
Description:

Target: scaffold1321; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 1834 - 1727
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| ||||||| |||| ||||||||| ||||| |||||||||| |||||||||||||||||||||||||| ||||||    
T  1834 gaattgtgttttctttttctcaagataaaatcttcttctgagatcacttcagaagctgtttgaaaatgcttctgatgtgatgacacttcagaggcaattg 1735  T
Q  119 acttgctt 126  Q
    | ||||||    
T  1734 atttgctt 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1321; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 1713 - 1629
Alignment:
Q  163 aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||||||||||||||||| ||||||  |||||||| |||||||||||||||||| ||||||||| ||||||| ||||    
T  1713 aaaacagagtaagagagaagaaagaatgacacatgcaattatattggttccttccacaaaccggaagtagtccagtcccccttgc 1629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1263 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold1263
Description:

Target: scaffold1263; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 2027 - 1920
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattg 118  Q
    ||||||||||||| |||||||||||| ||||||| |||| ||||||||| ||||| |||||||||| |||||||||||||||||||||||||| ||||||    
T  2027 gaattgtgttttctttttctcaagataaaatcttcttctgagatcacttcagaagctgtttgaaaatgcttctgatgtgatgacacttcagaggcaattg 1928  T
Q  119 acttgctt 126  Q
    | ||||||    
T  1927 atttgctt 1920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1263; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 1906 - 1822
Alignment:
Q  163 aaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||||||||||||||||| ||||||  |||||||| |||||||||||||||||| ||||||||| ||||||| ||||    
T  1906 aaaacagagtaagagagaagaaagaatgacacatgcaattatattggttccttccacaaaccggaagtagtccagtcccccttgc 1822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 154 - 247
Target Start/End: Original strand, 5727 - 5820
Alignment:
Q  154 cagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  5727 cagcggagtaaaacaaagtaagagaaaagaaagaaagacacaggcaattatactggttccttccacaaaccggaagtagtccagtcccccttgc 5820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 242
Target Start/End: Complemental strand, 7303 - 7182
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaac-agagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    ||||||||||||| |||  ||||||||||| |||||||| |||||  ||||||| ||||||||||||| |||||| |||||||||| |||||||||||||    
T  7303 tgcttctgatgtgaaatttagaattggatatgcagcggagtaaaaatagagtaacagagaagaaagaaggacacaaacaattataccggttccttccaca 7204  T
Q  221 aaccagaagtagtctagtcccc 242  Q
    || | ||||||||| |||||||    
T  7203 aatcggaagtagtccagtcccc 7182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 7369 - 7290
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtga 98  Q
    ||||||||||||| |||||||||||| ||||||| |||| ||||||||| ||||| | |||||||| |||||||||||||    
T  7369 gaattgtgttttctttttctcaagataaaatcttcttctgagatcacttcagaagctctttgaaaatgcttctgatgtga 7290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 1175 - 1099
Alignment:
Q  154 cagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagt 230  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||    
T  1175 cagcggagtaaaacagagtaagagagaagaaagaaagacacaggcaattatacaggttccttccacaaaccggaagt 1099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 57533 - 57434
Alignment:
Q  148 gataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    |||| |||||||||||||| ||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||||||||||| |||    
T  57533 gatatgcagcggaataaaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtctagtcccccttg 57435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 1251 - 1178
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctg 92  Q
    ||||||||||||| |||||||||||| ||||||| |||| || |||||| ||||| ||||  ||||||||||||    
T  1251 gaattgtgttttctttttctcaagataaaatcttcttctgaggtcacttcagaagctgttgaaaaacgcttctg 1178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 31930 - 31987
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt 230  Q
    ||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||    
T  31930 agagagaaagaagaaagacacaaagcaattatacaggttccttccacaaaccggaagt 31987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 59; Significance: 4e-25; HSPs: 3)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 2491 - 2374
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    ||||||||||||| | | ||||||||||||  ||||||| ||||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  2491 tgcttctgatgtgtagttcagaattggatacacagcggagtaaaaacagagta-gagagaagaaagagagacacaaacaattatactggttccttccaca 2393  T
Q  221 aaccagaagtagtctagtc 239  Q
    || | ||||||||| ||||    
T  2392 aatcggaagtagtccagtc 2374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 247
Target Start/End: Complemental strand, 267 - 141
Alignment:
Q  121 ttgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccac 219  Q
    ||||||||||||||   | ||||||  |||| |||| ||||||||| ||||||| ||||||||||||| |||||||  ||||||| ||||||| ||||||    
T  267 ttgcttctgatgtgatgttcagaatcagatatgcagtggaataaaaacagagta-gagagaagaaagagagacacaagcaattatcctggttctttccac 169  T
Q  220 aaaccagaagtagtctagtcccctttgc 247  Q
    ||||| ||||||||| ||||||| ||||    
T  168 aaaccggaagtagtccagtcccccttgc 141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 2557 - 2479
Alignment:
Q  19 gaattgtgttttcattttctcaagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtg 97  Q
    ||||||||||||| ||||||||| |  ||||||| |||| ||||||||| ||||| ||||| | || ||||||||||||    
T  2557 gaattgtgttttctttttctcaataaaaaatcttcttctgagatcacttcagaagctgtttaagaatgcttctgatgtg 2479  T

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Target: scaffold0297 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 247
Target Start/End: Original strand, 9261 - 9386
Alignment:
Q  123 gcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaa 222  Q
    |||||||||||||| | | |||||||||   ||||||| |||||| | || ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  9261 gcttctgatgtgcagttctgaattggatgcacagcggagtaaaactgtgtgagagagaagaaagaaagacacaggcaattatacaggttccttccacaaa 9360  T
Q  223 ccagaagt-agtctagtcccctttgc 247  Q
    || ||||| ||||| |||||| ||||    
T  9361 ccggaagtcagtcttgtcccccttgc 9386  T

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Target: scaffold0154 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 35043 - 35141
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  35043 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccagaagtagtccagtcccccttgc 35141  T

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Target: scaffold0443 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 247
Target Start/End: Complemental strand, 1866 - 1665
Alignment:
Q  46 aaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaat 145  Q
    ||||||| |||| | ||||||| ||||||||||  | |  |||||||||||||| | ||||||||  ||||| | |||||||||||||    | ||||||    
T  1866 aaatcttcttctgatatcacttcagaagttgttgaagagtgcttctgatgtgataatacttcagatgcaattaaattgcttctgatgtattgttcagaat 1767  T
Q  146 tggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctt 244  Q
       ||| |||||| | ||||| ||||||| |||| |||||||| |||||||  ||||||||||||||||||||||||||| ||||||||| ||||||| |    
T  1766 ctaatacgcagcgcagtaaaaacagagta-gagaaaagaaagagagacacaagcaattatactggttccttccacaaaccggaagtagtccagtccccct 1668  T
Q  245 tgc 247  Q
    |||    
T  1667 tgc 1665  T

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Target: scaffold0005 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 60440 - 60671
Alignment:
Q  19 gaattgtgttttcattttctc--aagatgaaatctttttctaagatcactttagaagttgtttgaaaacgcttctgatgtgatgacacttcagagacaat 116  Q
    ||||||||||||| |||||||  || |  ||||||| |||| | || |||| ||||| ||||||| |  ||||||||||| || | |||| |||  ||||    
T  60440 gaattgtgttttctttttctcttaaaaaaaaatcttcttctgatattacttcagaagctgtttgagagtgcttctgatgtaataatactttagatgcaat 60539  T
Q  117 tgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaa--cagagtaagagagaagaaagaaagacacagacaattatactggttcct 214  Q
    | | |||||||||||||    | |||||| ||||| |||||||| |||||  ||||||| |||| |||||||| |||||||  |||||||||||||||||    
T  60540 taaattgcttctgatgtattgttcagaatcggatacgcagcggagtaaaaaacagagta-gagaaaagaaagagagacacaagcaattatactggttcct 60638  T
Q  215 tccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||| |||||||||  |||||| ||||    
T  60639 tccacaaaccggaagtagtcctgtcccccttgc 60671  T

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Target: scaffold0002 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 247
Target Start/End: Complemental strand, 476106 - 475945
Alignment:
Q  86 gcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaattggataagcagcggaataa-aacagagtaagagagaagaa 184  Q
    |||||||||||||| | ||||||||   |||| | |||||||||||||| | |  |||||  |||| |||||||| ||| ||||||||| ||||||||||    
T  476106 gcttctgatgtgataatacttcagatgtaattaaattgcttctgatgtgaagtttagaatcagatacgcagcggattaacaacagagta-gagagaagaa 476008  T
Q  185 agaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||| | |||||  ||||||||||||||||||||||||||  ||||||||| ||||||| ||||    
T  476007 agagaaacacaagcaattatactggttccttccacaaactggaagtagtccagtcccccttgc 475945  T

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Target: scaffold0002; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 247
Target Start/End: Complemental strand, 482626 - 482465
Alignment:
Q  86 gcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaattggataagcagcggaataa-aacagagtaagagagaagaa 184  Q
    |||||||||||||| | ||||||||   |||| | |||||||||||||| | |  |||||  |||| |||||||| ||| ||||||||| ||||||||||    
T  482626 gcttctgatgtgataatacttcagatgtaattaaattgcttctgatgtgaagtttagaatcagatacgcagcggattaacaacagagta-gagagaagaa 482528  T
Q  185 agaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||| | |||||  ||||||||||||||||||||||||||  ||||||||| ||||||| ||||    
T  482527 agagaaacacaagcaattatactggttccttccacaaactggaagtagtccagtcccccttgc 482465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 12892 - 12768
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaa 221  Q
    |||||||||||||   | |||||||  ||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||    
T  12892 tgcttctgatgtgatgttcagaattatatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaa 12794  T
Q  222 accagaagtagtctagtcccctttgc 247  Q
    ||| ||||||||| ||||||| ||||    
T  12793 accggaagtagtccagtcccccttgc 12768  T

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Target: scaffold0185 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 86 - 242
Target Start/End: Original strand, 32246 - 32403
Alignment:
Q  86 gcttctgatgtgatgacacttcagagacaattgacttgcttctgatgtgcaatacagaattggataagcagcggaataaaa--cagagtaagagagaaga 183  Q
    |||||||||||||| | ||||||||  ||||| | |||||||||||||    | |||||| ||||| |||||||| |||||  ||||||| |||| ||||    
T  32246 gcttctgatgtgataatacttcagatgcaattaaattgcttctgatgtattgttcagaatcggatacgcagcggagtaaaaaacagagta-gagaaaaga 32344  T
Q  184 aagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
    |||| |||||||  |||||||| |||||||||||||||||| ||||||||  |||||||    
T  32345 aagagagacacaagcaattatattggttccttccacaaaccggaagtagttcagtcccc 32403  T

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Target: scaffold0142 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 40009 - 40107
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  40009 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 40107  T

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Target: scaffold0042 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 4804 - 4902
Alignment:
Q  148 gataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||||||||||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  4804 gatatgcagcggaataaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 4902  T

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Target: scaffold0001 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 29516 - 29422
Alignment:
Q  153 gcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||||| ||||||| |||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  29516 gcagcggaataaaaacagagta-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtctagtcccccttgc 29422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 709 - 836
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataa---aacagagtaagagagaagaaagaaagacacagacaattatactggttccttcca 218  Q
    |||||||||||||   | |||||| ||||| ||||||||||||   ||||||||| |||| |||||||| |||||||  ||||||| |||||||||||||    
T  709 tgcttctgatgtgatgttcagaatcggatacgcagcggaataacaaaacagagta-gagaaaagaaagagagacacaagcaattatcctggttccttcca 807  T
Q  219 caaaccagaagtagtctagtcccctttgc 247  Q
    |||||| ||||||||| ||||||| ||||    
T  808 caaaccggaagtagtccagtcccccttgc 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 10514 - 10415
Alignment:
Q  148 gataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttg 246  Q
    |||| |||||||||||||| || |||| |||| |||||||| ||||||| |||||||| ||||||||||||||||||| ||||||||| ||||||| |||    
T  10514 gatacgcagcggaataaaaacaaagta-gagaaaagaaagagagacacaaacaattatcctggttccttccacaaaccggaagtagtccagtcccccttg 10416  T

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Target: scaffold0382 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 247
Target Start/End: Complemental strand, 2065 - 1940
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||| ||||| ||||||| ||||||||||||| |||||||  ||||||||||| || ||||||||    
T  2065 tgcttctgatgtgttgttcagaatcagatacgcagcggagtaaaaacagagta-gagagaagaaagagagacacaagcaattatactgttttcttccaca 1967  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||| ||||||| ||||    
T  1966 aaccggaagtagtccagtcccccttgc 1940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 127122 - 127248
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaacagag-taagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||||||| | || | |||||||||||||| ||||||   ||||||| |||||||||||||||    
T  127122 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaaaacagattagagagaagaaagagagacacgagcaattatcctggttccttccaca 127221  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||| ||||||| ||||    
T  127222 aaccggaagtagtccagtcccccttgc 127248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 16134 - 16207
Alignment:
Q  174 agagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||| ||||||||||||| ||||    
T  16134 agagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaactagtctagtcccccttgc 16207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 15260 - 15333
Alignment:
Q  174 agagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  15260 agagaaaagaaagaaagacacaagcaattattctggttccttccacaaaccggaagtagtccagtcccccttgc 15333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 152 - 263
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | |||||| ||||| ||||| |||||||| ||||||| |||| |||||||| |||||||  |||||||  ||||||||||||||    
T  152 tgcttctgatgtgatgttcagaatcggatacgcagcagaataaaaacagagta-gagaaaagaaagagagacacaagcaattatcttggttccttccaca 250  T
Q  221 aaccagaagtagt 233  Q
    |||||||||||||    
T  251 aaccagaagtagt 263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 4532 - 4643
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | |||||| ||||| ||||| |||||||| ||||||| |||| |||||||| |||||||  |||||||  ||||||||||||||    
T  4532 tgcttctgatgtgatgttcagaatcggatacgcagcagaataaaaacagagta-gagaaaagaaagagagacacaagcaattatcttggttccttccaca 4630  T
Q  221 aaccagaagtagt 233  Q
    |||||||||||||    
T  4631 aaccagaagtagt 4643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0738 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0738
Description:

Target: scaffold0738; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 5548 - 5454
Alignment:
Q  153 gcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||||| ||||| | |||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  5548 gcagcggaataaaaacagagca-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 5454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 28976 - 29076
Alignment:
Q  148 gataagcagcggaataaaa--cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtccccttt 245  Q
    |||| ||||||||||||||  || |||| |||| |||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| ||    
T  28976 gatatgcagcggaataaaaaacaaagta-gagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccggaagtagtccagtccccctt 29074  T
Q  246 gc 247  Q
    ||    
T  29075 gc 29076  T

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Target: scaffold0163; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 25804 - 25861
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt 230  Q
    ||||||||| || ||||||||| | ||||||||| ||||||||||||||||| |||||    
T  25804 agagagaaggaaaaaagacacaaagcaattatacaggttccttccacaaaccggaagt 25861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 57842 - 57967
Alignment:
Q  122 tgcttctgatgtgcaatacagaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccaca 220  Q
    |||||||||||||   | ||||||  |||| |||||||||||||| || |||| |||| |||||||| |||||||  ||||||| ||||||||||||| |    
T  57842 tgcttctgatgtgatgttcagaatcagatatgcagcggaataaaaacaaagta-gagaaaagaaagagagacacaagcaattatcctggttccttccata 57940  T
Q  221 aaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||| ||||||| ||||    
T  57941 aaccggaagtagtccagtcccccttgc 57967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 38727 - 38621
Alignment:
Q  141 agaattggataagcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtc 239  Q
    ||||||||||| | |||||||||||| |||| | ||||| |||||||| |||||||  ||||||| |||||||||||||||||||  |||||||| |||     
T  38727 agaattggatatgtagcggaataaaaacaga-tcagagaaaagaaagagagacacaagcaattatcctggttccttccacaaaccgtaagtagtccagtt 38629  T
Q  240 ccctttgc 247  Q
    ||| ||||    
T  38628 ccccttgc 38621  T

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Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 247
Target Start/End: Original strand, 36759 - 36848
Alignment:
Q  159 gaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||||  | ||||||  |||||||||| | | ||||||||| |||||||||||||||||||||||||||   ||||||||||    
T  36759 gaataaaacagagacatagagaaagaagaaagacaaaaaacaattatacaggttccttccacaaaccagaagtagtcctatcccctttgc 36848  T

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Target: scaffold0022; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 247
Target Start/End: Original strand, 134819 - 134908
Alignment:
Q  159 gaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||||  | ||||||  |||||||||| | | ||||||||| |||||||||||||||||||||||||||   ||||||||||    
T  134819 gaataaaacagagacatagagaaagaagaaagacaaaaaacaattatacaggttccttccacaaaccagaagtagtcctatcccctttgc 134908  T

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Target: scaffold0161 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 10893 - 10800
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| |||||||||  ||||||||  ||||||||||||   ||||||||| |||||||||||||||||| ||||||||  |||||| ||||    
T  10893 gcagcggaaaaaaacagag--agagagaaagaagaaagacacaatgcaattatacaggttccttccacaaaccaaaagtagtcctgtcccccttgc 10800  T

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Target: scaffold0161; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 15557 - 15464
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| |||||||||  ||||||||  ||||||||||||   ||||||||| |||||||||||||||||| ||||||||  |||||| ||||    
T  15557 gcagcggaaaaaaacagag--agagagaaagaagaaagacacaatgcaattatacaggttccttccacaaaccaaaagtagtcctgtcccccttgc 15464  T

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Target: scaffold0146 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 14472 - 14536
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||| |||||| ||||    
T  14472 aagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcttgtcccccttgc 14536  T

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Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 20245 - 20162
Alignment:
Q  161 ataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||||| ||||||||||||||| | | |   |||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  20245 ataaaacagagaaagagagaagaaagatacaaa---acaattatacaggttccttccacaaaccggaagtagtcctgtcccccttgc 20162  T

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Target: scaffold0547 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 255 - 349
Alignment:
Q  153 gcagcggaataaaa-cagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||||| || |||| |||| |||||| | |||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  255 gcagcggaataaaaacatagta-gagaaaagaaacagagacacaagcaattatcctggttccttccacaaatcggaagtagtccagtcccccttgc 349  T

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Target: scaffold0327 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 7232 - 7173
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccc 242  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||| ||||||    
T  7232 aagaaagacacaaaacaattatacaggttccttccacaaaccggaagtagtcttgtcccc 7173  T

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Target: scaffold0567 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 9250 - 9324
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  9250 agagagaaagaagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcatgtcccccttgc 9324  T

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Target: scaffold0349 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 10258 - 10355
Alignment:
Q  143 aattggataagcagcggaataaaacagagtaagagagaagaaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtccc 241  Q
    |||| |||| ||||||||| | ||||||| | |||| |||||||| ||||| | ||| ||||||||||||||||||||| || ||||||| | ||||||    
T  10258 aattagatatgcagcggaaaagaacagagca-gagaaaagaaagatagacagaaacagttatactggttccttccacaatccggaagtagcccagtccc 10355  T

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Target: scaffold1409 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1409
Description:

Target: scaffold1409; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 1723 - 1818
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| |||||| ||||||||  ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  1723 gcagcggaaaagaacagag-aagagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 1818  T

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Target: scaffold0739 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 1551 - 1600
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  1551 caattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 1600  T

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Target: scaffold0497 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 10987 - 10938
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||| ||||    
T  10987 caattatcctggttccttccacaaaccggaagtagtccagtcccccttgc 10938  T

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Target: scaffold0322 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 7597 - 7533
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  7597 aaagcaagacacaagcaattatcctggttccttccacaaatcggaagtagtccagtcccccttgc 7533  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 245037 - 244973
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  245037 aagaaagacacaaagcaattatacaggttccttccacaaaccggaagtagtcgtgtcccccttgc 244973  T

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Target: scaffold0337 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 247
Target Start/End: Original strand, 14291 - 14385
Alignment:
Q  152 agcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt-agtctagtcccctttgc 247  Q
    ||||||||| ||||||||||  ||||||||  || ||||||||| | ||||||||| || |||||||||||||||||||| ||||| |||||| ||||    
T  14291 agcagcgga-taaaacagag--agagagaaagaataaagacacaaagcaattatacaggctccttccacaaaccagaagtcagtcttgtcccccttgc 14385  T

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Target: scaffold0269 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 16338 - 16384
Alignment:
Q  201 ttatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||||||||||||||||| ||||||||| | ||||| ||||    
T  16338 ttatactggttccttccacaaaccggaagtagtccaatcccccttgc 16384  T

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Target: scaffold0193 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 16871 - 16821
Alignment:
Q  197 acaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||| ||||||||||||||||| |||||||||  |||||| ||||    
T  16871 acaattatacaggttccttccacaaaccggaagtagtcacgtcccccttgc 16821  T

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Target: scaffold0065 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 247
Target Start/End: Original strand, 1333 - 1427
Alignment:
Q  152 agcagcggaataaaacagagtaagagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt-agtctagtcccctttgc 247  Q
    ||||||||| ||||||||||  ||||||||  || ||||||||| | ||||||||| || |||||||||||||||||||| ||||| |||||| ||||    
T  1333 agcagcgga-taaaacagag--agagagaaagaataaagacacaaagcaattatacaggctccttccacaaaccagaagtcagtcttgtcccccttgc 1427  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 52490 - 52382
Alignment:
Q  140 cagaattggataagcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctag 237  Q
    ||||||| |||  ||||||||| | ||||||||| |||| ||||||||  ||||||||  || |||| ||||||||||||||||  | ||||||||| ||    
T  52490 cagaattagatgtgcagcggaaaagaacagagta-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaacacggaagtagtccag 52392  T
Q  238 tcccctttgc 247  Q
    ||||| ||||    
T  52391 tcccccttgc 52382  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 28194 - 28137
Alignment:
Q  174 agagagaagaaagaaagacacaga-caattatactggttccttccacaaaccagaagt 230  Q
    ||||||||  |||||||||||| | ||||||||| ||||||||||||||||| |||||    
T  28194 agagagaaagaagaaagacacaaagcaattatacaggttccttccacaaaccggaagt 28137  T

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Target: scaffold0120 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 37502 - 37437
Alignment:
Q  184 aagaaagacacaga-caattatactggttccttccacaaaccagaagtagtctagtcccctttgct 248  Q
    |||||||||||| | ||||||||| ||||||||||||||| | |||||||||  |||||| |||||    
T  37502 aagaaagacacaaagcaattatacaggttccttccacaaatcggaagtagtcctgtcccccttgct 37437  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 32527 - 32478
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||  ||||||||||||||||| |||||||||| |||||| ||||    
T  32527 caattatataggttccttccacaaaccggaagtagtcttgtcccccttgc 32478  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.00000009; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 14095 - 14190
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  14095 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 14190  T

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Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 54867 - 54772
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  54867 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 54772  T

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Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 80765 - 80801
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtc 234  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  80765 caattatacaggttccttccacaaaccggaagtagtc 80801  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 61261 - 61166
Alignment:
Q  153 gcagcggaataaaacagagtaagagagaagaaaga--aagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    ||||||||| | ||||||| | |||| ||||||||  ||||||||| || |||| ||||||||||||||||  | ||||||||| ||||||| ||||    
T  61261 gcagcggaaaagaacagagca-gagaaaagaaagacaaagacacaggcagttatcctggttccttccacaacacggaagtagtccagtcccccttgc 61166  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 268151 - 268188
Alignment:
Q  197 acaattatactggttccttccacaaaccagaagtagtc 234  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  268151 acaattatacaggttccttccacaaaccggaagtagtc 268188  T

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Target: scaffold1200 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1200
Description:

Target: scaffold1200; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 126 - 66
Alignment:
Q  187 aaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  126 aaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 66  T

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Target: scaffold0627 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 8778 - 8718
Alignment:
Q  187 aaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  8778 aaagacacaagcagttatcctggttccttccacaaaacggaagtagtccagtcccccttgc 8718  T

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Target: scaffold0414 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 1431 - 1495
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  1431 aaagcaagacacaagcagttatcctggttccttccacaaaacggaagtagtccagtcccccttgc 1495  T

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Target: scaffold0251 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 21361 - 21425
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  21361 aaagcaagacacaagcagttatcctggttccttccacaaatcggaagtagtccagtcccccttgc 21425  T

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Target: scaffold0072 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 37447 - 37383
Alignment:
Q  183 aaagaaagacacagacaattatactggttccttccacaaaccagaagtagtctagtcccctttgc 247  Q
    |||| ||||||||  || |||| ||||||||||||||||| | ||||||||| ||||||| ||||    
T  37447 aaagcaagacacaagcagttatcctggttccttccacaaaacggaagtagtccagtcccccttgc 37383  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 59449 - 59485
Alignment:
Q  198 caattatactggttccttccacaaaccagaagtagtc 234  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  59449 caattatacaggttccttccacaaaccggaagtagtc 59485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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