View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5651_low_1 (Length: 526)

Name: NF5651_low_1
Description: NF5651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5651_low_1
NF5651_low_1
[»] chr3 (63 HSPs)
chr3 (181-390)||(5335962-5336171)
chr3 (33-179)||(10615276-10615422)
chr3 (32-180)||(46610009-46610157)
chr3 (33-182)||(10616681-10616833)
chr3 (419-508)||(5336168-5336255)
chr3 (35-163)||(28208057-28208184)
chr3 (32-181)||(46597417-46597566)
chr3 (32-183)||(15086219-15086371)
chr3 (43-183)||(37977429-37977566)
chr3 (35-181)||(28206981-28207123)
chr3 (32-185)||(22256197-22256351)
chr3 (32-111)||(48288270-48288349)
chr3 (35-112)||(43930712-43930789)
chr3 (35-112)||(2011872-2011949)
chr3 (32-109)||(24528471-24528548)
chr3 (43-181)||(46596094-46596232)
chr3 (35-112)||(2011124-2011201)
chr3 (43-112)||(15093633-15093702)
chr3 (125-182)||(18142199-18142256)
chr3 (125-178)||(48044276-48044329)
chr3 (35-112)||(51386329-51386406)
chr3 (127-180)||(54567747-54567800)
chr3 (35-111)||(43929976-43930052)
chr3 (33-99)||(27360492-27360558)
chr3 (125-182)||(18140938-18140995)
chr3 (32-163)||(18704971-18705095)
chr3 (43-112)||(27315262-27315331)
chr3 (32-180)||(22257243-22257390)
chr3 (35-110)||(27318151-27318226)
chr3 (43-181)||(38843470-38843608)
chr3 (45-112)||(51385665-51385732)
chr3 (79-181)||(14826031-14826133)
chr3 (36-102)||(52396360-52396426)
chr3 (125-182)||(7248863-7248920)
chr3 (43-112)||(23545445-23545514)
chr3 (125-182)||(24909378-24909435)
chr3 (125-182)||(31835843-31835900)
chr3 (43-112)||(38842186-38842255)
chr3 (134-182)||(51460774-51460822)
chr3 (125-179)||(4218868-4218923)
chr3 (130-181)||(12066228-12066279)
chr3 (129-180)||(12210028-12210079)
chr3 (79-162)||(14824769-14824852)
chr3 (125-180)||(29184983-29185038)
chr3 (129-184)||(49265297-49265352)
chr3 (67-182)||(23539260-23539377)
chr3 (125-167)||(51116225-51116267)
chr3 (148-181)||(6510214-6510247)
chr3 (129-182)||(11359455-11359508)
chr3 (43-112)||(16386511-16386580)
chr3 (149-182)||(20957195-20957228)
chr3 (43-112)||(24842889-24842958)
chr3 (150-183)||(27497796-27497829)
chr3 (43-112)||(37976037-37976105)
chr3 (128-185)||(38343179-38343236)
chr3 (129-182)||(45291418-45291471)
chr3 (148-181)||(49872974-49873007)
chr3 (125-181)||(15093716-15093772)
chr3 (134-182)||(30271542-30271590)
chr3 (127-163)||(37975987-37976023)
chr3 (148-180)||(47115587-47115619)
chr3 (148-180)||(49880762-49880794)
chr3 (125-184)||(51252286-51252346)
[»] chr2 (66 HSPs)
chr2 (34-188)||(38937419-38937573)
chr2 (33-181)||(1902929-1903078)
chr2 (32-181)||(1904317-1904467)
chr2 (32-180)||(7576325-7576473)
chr2 (32-180)||(44366867-44367016)
chr2 (40-183)||(7577693-7577837)
chr2 (32-180)||(38815002-38815150)
chr2 (32-180)||(38935945-38936092)
chr2 (34-112)||(38936998-38937076)
chr2 (32-184)||(16670495-16670647)
chr2 (32-112)||(21903993-21904073)
chr2 (35-112)||(38876058-38876135)
chr2 (36-181)||(38876934-38877079)
chr2 (32-112)||(38813644-38813724)
chr2 (32-183)||(23834578-23834729)
chr2 (32-182)||(23835682-23835831)
chr2 (35-112)||(11101163-11101239)
chr2 (32-183)||(18250798-18250950)
chr2 (32-112)||(44368293-44368373)
chr2 (35-181)||(18249630-18249776)
chr2 (35-112)||(31551974-31552050)
chr2 (32-111)||(16671712-16671791)
chr2 (32-112)||(41305950-41306030)
chr2 (35-112)||(36565304-36565381)
chr2 (32-112)||(5970665-5970745)
chr2 (33-112)||(5969797-5969876)
chr2 (37-112)||(10355076-10355151)
chr2 (127-182)||(19686183-19686238)
chr2 (35-112)||(11102077-11102154)
chr2 (39-112)||(22293460-22293533)
chr2 (32-112)||(41307056-41307136)
chr2 (62-112)||(22292547-22292597)
chr2 (35-104)||(10355232-10355301)
chr2 (125-182)||(15749010-15749067)
chr2 (125-181)||(22468226-22468283)
chr2 (125-181)||(22474447-22474504)
chr2 (43-112)||(39151237-39151306)
chr2 (125-181)||(30371384-30371440)
chr2 (125-179)||(22466982-22467037)
chr2 (125-184)||(28141684-28141743)
chr2 (35-110)||(31551598-31551673)
chr2 (125-180)||(44242357-44242412)
chr2 (148-182)||(17328090-17328124)
chr2 (62-112)||(18416612-18416662)
chr2 (125-182)||(21903921-21903979)
chr2 (125-182)||(28462495-28462553)
chr2 (125-183)||(45161383-45161440)
chr2 (150-183)||(3364588-3364621)
chr2 (125-182)||(8237987-8238044)
chr2 (133-182)||(15747749-15747798)
chr2 (148-181)||(16577372-16577405)
chr2 (150-183)||(19052200-19052233)
chr2 (148-181)||(19493473-19493506)
chr2 (148-181)||(22116154-22116187)
chr2 (148-181)||(34635705-34635738)
chr2 (125-182)||(44241095-44241152)
chr2 (148-180)||(19641446-19641478)
chr2 (148-180)||(19840039-19840071)
chr2 (148-188)||(20182256-20182296)
chr2 (148-184)||(22535450-22535486)
chr2 (148-184)||(23260316-23260352)
chr2 (148-180)||(28149691-28149723)
chr2 (148-180)||(29835102-29835134)
chr2 (148-180)||(37147551-37147583)
chr2 (148-184)||(38385931-38385967)
chr2 (125-181)||(41305880-41305935)
[»] chr5 (54 HSPs)
chr5 (32-181)||(15061732-15061881)
chr5 (32-181)||(15615102-15615251)
chr5 (33-182)||(11956137-11956287)
chr5 (33-182)||(15060161-15060311)
chr5 (32-181)||(41064143-41064293)
chr5 (32-180)||(21776815-21776964)
chr5 (32-180)||(30796579-30796727)
chr5 (32-182)||(15616408-15616559)
chr5 (32-181)||(11957557-11957707)
chr5 (33-182)||(41065566-41065716)
chr5 (35-181)||(30798490-30798636)
chr5 (32-157)||(21775485-21775610)
chr5 (32-112)||(29520203-29520283)
chr5 (32-112)||(10012716-10012796)
chr5 (32-112)||(29521338-29521418)
chr5 (43-181)||(11438338-11438476)
chr5 (33-112)||(40434544-40434623)
chr5 (32-108)||(8367907-8367983)
chr5 (32-112)||(40434315-40434394)
chr5 (125-184)||(9751678-9751737)
chr5 (49-112)||(33750986-33751049)
chr5 (32-108)||(11439708-11439784)
chr5 (43-180)||(37274748-37274883)
chr5 (125-179)||(13948584-13948638)
chr5 (125-179)||(28819537-28819591)
chr5 (43-112)||(4061429-4061498)
chr5 (43-112)||(40434055-40434123)
chr5 (65-112)||(33847179-33847226)
chr5 (127-188)||(10011611-10011671)
chr5 (134-187)||(29104437-29104490)
chr5 (129-181)||(11439803-11439855)
chr5 (127-182)||(19599968-19600024)
chr5 (125-189)||(26034836-26034900)
chr5 (132-183)||(8368006-8368057)
chr5 (148-191)||(10976772-10976815)
chr5 (125-180)||(11890101-11890155)
chr5 (43-110)||(33751944-33752011)
chr5 (69-111)||(10011683-10011725)
chr5 (135-181)||(15395543-15395589)
chr5 (125-191)||(25962791-25962857)
chr5 (134-180)||(34407904-34407950)
chr5 (125-163)||(35599330-35599368)
chr5 (148-182)||(38482316-38482350)
chr5 (125-181)||(9750446-9750503)
chr5 (127-180)||(10012810-10012863)
chr5 (125-182)||(18254370-18254427)
chr5 (148-181)||(22551521-22551554)
chr5 (43-112)||(33847658-33847727)
chr5 (47-108)||(42004907-42004968)
chr5 (125-181)||(889067-889123)
chr5 (148-180)||(12399611-12399643)
chr5 (125-181)||(26888459-26888515)
chr5 (148-192)||(31312796-31312840)
chr5 (129-184)||(35600544-35600600)
[»] chr8 (55 HSPs)
chr8 (32-179)||(27164567-27164714)
chr8 (32-181)||(39809995-39810145)
chr8 (33-192)||(27163104-27163264)
chr8 (32-180)||(39808649-39808796)
chr8 (32-180)||(42348961-42349109)
chr8 (32-183)||(42350086-42350238)
chr8 (35-112)||(28574607-28574684)
chr8 (32-180)||(1600077-1600223)
chr8 (33-112)||(5704440-5704519)
chr8 (34-112)||(1601164-1601242)
chr8 (32-181)||(1601672-1601819)
chr8 (32-112)||(1602807-1602887)
chr8 (35-112)||(28561502-28561579)
chr8 (35-112)||(28561931-28562008)
chr8 (35-112)||(28567000-28567077)
chr8 (35-112)||(28567429-28567506)
chr8 (125-181)||(39513866-39513922)
chr8 (35-112)||(3252231-3252308)
chr8 (125-182)||(40702012-40702069)
chr8 (43-163)||(5703070-5703190)
chr8 (38-181)||(28575027-28575170)
chr8 (125-180)||(2270293-2270348)
chr8 (69-112)||(39913880-39913923)
chr8 (125-180)||(31986230-31986287)
chr8 (125-179)||(34901503-34901557)
chr8 (43-112)||(21397802-21397871)
chr8 (43-112)||(21792295-21792364)
chr8 (65-112)||(6105624-6105671)
chr8 (127-181)||(31985010-31985065)
chr8 (125-181)||(12330332-12330388)
chr8 (148-184)||(25277731-25277767)
chr8 (125-184)||(25653700-25653759)
chr8 (148-183)||(29309799-29309834)
chr8 (150-187)||(7988785-7988823)
chr8 (78-112)||(9768259-9768293)
chr8 (148-182)||(29309563-29309597)
chr8 (125-183)||(38711942-38712000)
chr8 (150-183)||(4482042-4482075)
chr8 (148-181)||(14329625-14329658)
chr8 (43-112)||(16432679-16432748)
chr8 (148-181)||(34985347-34985380)
chr8 (148-180)||(960522-960554)
chr8 (134-186)||(4105291-4105342)
chr8 (148-184)||(25601972-25602008)
chr8 (148-180)||(27543650-27543682)
chr8 (148-184)||(27987293-27987329)
chr8 (149-181)||(27987552-27987584)
chr8 (148-184)||(28044595-28044631)
chr8 (149-181)||(28044854-28044886)
chr8 (140-184)||(28561430-28561474)
chr8 (140-184)||(28566928-28566972)
chr8 (125-184)||(34902739-34902799)
chr8 (125-181)||(39515124-39515180)
chr8 (134-186)||(40770525-40770576)
chr8 (150-182)||(43400669-43400701)
[»] chr1 (85 HSPs)
chr1 (33-183)||(14625367-14625517)
chr1 (32-183)||(9441564-9441716)
chr1 (32-181)||(9442898-9443048)
chr1 (32-184)||(14626687-14626840)
chr1 (32-180)||(52084734-52084884)
chr1 (243-362)||(6382924-6383045)
chr1 (32-181)||(23322518-23322668)
chr1 (32-112)||(13917180-13917260)
chr1 (32-178)||(2273503-2273648)
chr1 (32-112)||(37194399-37194478)
chr1 (35-112)||(13916159-13916236)
chr1 (43-181)||(43635834-43635970)
chr1 (32-101)||(52083630-52083698)
chr1 (32-189)||(23321254-23321412)
chr1 (35-112)||(5560940-5561017)
chr1 (32-112)||(6077008-6077088)
chr1 (248-362)||(6422239-6422353)
chr1 (181-246)||(6382830-6382897)
chr1 (43-183)||(8930267-8930406)
chr1 (35-112)||(37193546-37193623)
chr1 (32-100)||(27547406-27547474)
chr1 (243-362)||(6373633-6373751)
chr1 (179-242)||(6422140-6422203)
chr1 (32-110)||(2274571-2274649)
chr1 (125-178)||(1825296-1825349)
chr1 (125-182)||(26097029-26097086)
chr1 (43-112)||(30536435-30536504)
chr1 (35-104)||(51903390-51903459)
chr1 (125-181)||(8928814-8928870)
chr1 (125-181)||(26095813-26095869)
chr1 (32-112)||(44311275-44311355)
chr1 (243-362)||(6361185-6361303)
chr1 (125-184)||(13902061-13902120)
chr1 (189-243)||(6373552-6373606)
chr1 (148-193)||(47022094-47022139)
chr1 (131-183)||(13903379-13903431)
chr1 (125-181)||(16785721-16785777)
chr1 (129-181)||(32131909-32131961)
chr1 (147-191)||(50961345-50961389)
chr1 (179-227)||(6361038-6361088)
chr1 (187-243)||(6368640-6368698)
chr1 (125-180)||(51470129-51470184)
chr1 (183-225)||(6400329-6400371)
chr1 (125-183)||(25235771-25235829)
chr1 (265-362)||(6368759-6368856)
chr1 (129-182)||(14978715-14978768)
chr1 (125-181)||(33667634-33667691)
chr1 (125-177)||(40247382-40247435)
chr1 (179-227)||(6350200-6350248)
chr1 (179-219)||(6391938-6391978)
chr1 (126-182)||(24545455-24545511)
chr1 (43-167)||(38741488-38741612)
chr1 (125-167)||(4487551-4487594)
chr1 (129-184)||(35979590-35979645)
chr1 (65-112)||(37269602-37269649)
chr1 (125-179)||(47146370-47146425)
chr1 (125-180)||(49201387-49201442)
chr1 (130-180)||(52083580-52083631)
chr1 (148-186)||(2059451-2059489)
chr1 (148-190)||(2472609-2472651)
chr1 (38-112)||(5561649-5561722)
chr1 (133-167)||(8985817-8985851)
chr1 (150-184)||(13545575-13545609)
chr1 (148-182)||(18458827-18458861)
chr1 (125-182)||(33934635-33934693)
chr1 (129-183)||(38742387-38742441)
chr1 (125-181)||(1826436-1826493)
chr1 (79-112)||(8928884-8928917)
chr1 (148-181)||(9439427-9439460)
chr1 (148-181)||(24987607-24987640)
chr1 (125-181)||(25600929-25600986)
chr1 (127-180)||(25601922-25601975)
chr1 (134-183)||(30434277-30434326)
chr1 (141-182)||(33936095-33936136)
chr1 (125-181)||(36343153-36343210)
chr1 (43-112)||(37268891-37268960)
chr1 (140-181)||(44311207-44311248)
chr1 (43-103)||(4487617-4487677)
chr1 (148-180)||(10028002-10028034)
chr1 (129-177)||(15336378-15336426)
chr1 (140-180)||(40246277-40246317)
chr1 (125-181)||(44200326-44200382)
chr1 (134-182)||(47221949-47221997)
chr1 (148-184)||(48643364-48643400)
chr1 (140-183)||(50105413-50105457)
[»] chr6 (34 HSPs)
chr6 (32-182)||(24235539-24235690)
chr6 (35-182)||(24234327-24234475)
chr6 (32-180)||(22056482-22056631)
chr6 (32-180)||(22058187-22058336)
chr6 (32-163)||(24914456-24914587)
chr6 (32-181)||(56021-56170)
chr6 (32-182)||(12322712-12322862)
chr6 (34-180)||(54807-54952)
chr6 (32-182)||(12321560-12321711)
chr6 (43-181)||(34762181-34762319)
chr6 (32-97)||(5999793-5999858)
chr6 (35-110)||(6000582-6000657)
chr6 (125-180)||(14328648-14328703)
chr6 (125-180)||(14421658-14421713)
chr6 (129-182)||(3063489-3063542)
chr6 (43-180)||(33483696-33483833)
chr6 (65-163)||(33485017-33485115)
chr6 (67-184)||(11425712-11425829)
chr6 (125-179)||(14327370-14327424)
chr6 (125-179)||(14420380-14420434)
chr6 (125-186)||(31851752-31851813)
chr6 (32-112)||(3370131-3370211)
chr6 (135-189)||(16129485-16129539)
chr6 (140-182)||(22366235-22366277)
chr6 (148-182)||(29942468-29942502)
chr6 (79-112)||(6759073-6759106)
chr6 (149-182)||(22574056-22574089)
chr6 (125-181)||(6000674-6000729)
chr6 (148-180)||(10344050-10344082)
chr6 (148-180)||(13114398-13114430)
chr6 (129-181)||(22573801-22573853)
chr6 (140-180)||(23270226-23270266)
chr6 (148-180)||(24387786-24387818)
chr6 (125-181)||(30409671-30409727)
[»] chr7 (52 HSPs)
chr7 (32-181)||(17763335-17763485)
chr7 (32-180)||(17764608-17764757)
chr7 (35-184)||(34158054-34158203)
chr7 (32-112)||(48170170-48170250)
chr7 (35-189)||(1831892-1832045)
chr7 (32-184)||(9554168-9554321)
chr7 (35-182)||(9553398-9553546)
chr7 (32-181)||(1830811-1830960)
chr7 (32-110)||(11056803-11056881)
chr7 (43-112)||(24436305-24436374)
chr7 (32-112)||(25776414-25776494)
chr7 (35-91)||(48168915-48168971)
chr7 (35-112)||(13772551-13772629)
chr7 (125-183)||(48168847-48168905)
chr7 (126-183)||(1594127-1594184)
chr7 (43-112)||(35891075-35891144)
chr7 (127-182)||(21237349-21237404)
chr7 (125-182)||(42509040-42509097)
chr7 (43-112)||(47638737-47638806)
chr7 (129-184)||(11056725-11056781)
chr7 (32-112)||(33767298-33767378)
chr7 (62-176)||(8174888-8175003)
chr7 (43-102)||(47637794-47637853)
chr7 (129-183)||(48945181-48945235)
chr7 (134-183)||(6269525-6269574)
chr7 (35-112)||(13771629-13771706)
chr7 (125-181)||(24434906-24434963)
chr7 (127-188)||(33757402-33757463)
chr7 (125-184)||(5219038-5219098)
chr7 (125-181)||(14554450-14554506)
chr7 (134-182)||(19272460-19272508)
chr7 (132-184)||(48896475-48896527)
chr7 (125-180)||(13279419-13279474)
chr7 (81-112)||(24434980-24435011)
chr7 (125-163)||(1589403-1589441)
chr7 (148-182)||(9915649-9915683)
chr7 (148-182)||(9923561-9923595)
chr7 (148-182)||(23784582-23784616)
chr7 (67-112)||(9113343-9113388)
chr7 (43-112)||(11058092-11058161)
chr7 (148-181)||(24555926-24555959)
chr7 (67-112)||(37413787-37413832)
chr7 (43-100)||(46459064-46459121)
chr7 (148-184)||(13882599-13882635)
chr7 (148-180)||(23371449-23371481)
chr7 (127-182)||(24757995-24758051)
chr7 (148-184)||(26050428-26050464)
chr7 (148-184)||(26059787-26059823)
chr7 (149-181)||(35913310-35913342)
chr7 (148-180)||(38193219-38193251)
chr7 (148-180)||(39580191-39580223)
chr7 (140-180)||(42202161-42202201)
[»] chr4 (64 HSPs)
chr4 (33-183)||(20962191-20962341)
chr4 (32-182)||(29248240-29248390)
chr4 (33-181)||(34739887-34740036)
chr4 (32-177)||(34741302-34741448)
chr4 (32-180)||(20963608-20963757)
chr4 (32-182)||(29249618-29249769)
chr4 (35-180)||(12566850-12566996)
chr4 (32-183)||(50881332-50881482)
chr4 (32-183)||(54554380-54554530)
chr4 (35-112)||(50879976-50880053)
chr4 (35-107)||(46427158-46427230)
chr4 (38-112)||(43537752-43537826)
chr4 (35-112)||(43537519-43537596)
chr4 (32-112)||(55499319-55499399)
chr4 (69-177)||(51752686-51752794)
chr4 (32-181)||(55500313-55500464)
chr4 (64-179)||(21994328-21994441)
chr4 (43-112)||(2438320-2438389)
chr4 (49-181)||(40479442-40479574)
chr4 (129-180)||(550673-550724)
chr4 (125-180)||(34027196-34027251)
chr4 (125-180)||(54555353-54555408)
chr4 (60-182)||(14183609-14183731)
chr4 (133-183)||(43860923-43860973)
chr4 (43-112)||(15695096-15695165)
chr4 (32-109)||(37600875-37600952)
chr4 (43-112)||(51754118-51754187)
chr4 (32-112)||(46426169-46426240)
chr4 (32-112)||(49629701-49629780)
chr4 (125-184)||(9136406-9136465)
chr4 (148-186)||(20125443-20125481)
chr4 (35-112)||(49630509-49630586)
chr4 (43-104)||(9410076-9410137)
chr4 (35-163)||(17695884-17696012)
chr4 (148-181)||(35539805-35539838)
chr4 (125-178)||(51164022-51164075)
chr4 (148-183)||(21780119-21780154)
chr4 (148-183)||(22272927-22272962)
chr4 (134-185)||(38656066-38656117)
chr4 (125-184)||(48029411-48029469)
chr4 (125-180)||(50138488-50138543)
chr4 (133-184)||(51754210-51754261)
chr4 (70-112)||(15694529-15694571)
chr4 (148-182)||(24215766-24215800)
chr4 (127-181)||(50879908-50879962)
chr4 (43-112)||(7533658-7533727)
chr4 (43-112)||(9410200-9410269)
chr4 (148-181)||(11563542-11563575)
chr4 (132-181)||(11861902-11861951)
chr4 (148-181)||(37273420-37273453)
chr4 (43-112)||(37421821-37421890)
chr4 (148-181)||(50727589-50727622)
chr4 (148-181)||(50735603-50735636)
chr4 (79-112)||(52264512-52264545)
chr4 (149-181)||(9001443-9001475)
chr4 (125-180)||(9410284-9410340)
chr4 (125-181)||(11862028-11862084)
chr4 (134-178)||(12352470-12352514)
chr4 (134-182)||(13128436-13128484)
chr4 (148-196)||(16493502-16493550)
chr4 (127-179)||(17289980-17290032)
chr4 (125-177)||(20612969-20613021)
chr4 (125-181)||(41331768-41331824)
chr4 (32-112)||(54555258-54555338)
[»] scaffold0176 (1 HSPs)
scaffold0176 (32-181)||(195-346)
[»] scaffold0250 (2 HSPs)
scaffold0250 (32-184)||(10076-10228)
scaffold0250 (43-112)||(11488-11557)
[»] scaffold0804 (1 HSPs)
scaffold0804 (32-184)||(2729-2882)
[»] scaffold0210 (2 HSPs)
scaffold0210 (32-181)||(4706-4856)
scaffold0210 (32-189)||(5801-5962)
[»] scaffold0040 (2 HSPs)
scaffold0040 (43-180)||(64503-64640)
scaffold0040 (43-181)||(65962-66102)
[»] scaffold0246 (3 HSPs)
scaffold0246 (32-108)||(15947-16023)
scaffold0246 (49-181)||(17381-17513)
scaffold0246 (125-181)||(15871-15927)
[»] scaffold0228 (3 HSPs)
scaffold0228 (32-181)||(8081-8231)
scaffold0228 (32-181)||(15663-15813)
scaffold0228 (32-181)||(25615-25765)
[»] scaffold0725 (2 HSPs)
scaffold0725 (125-182)||(3912-3969)
scaffold0725 (125-182)||(4958-5017)
[»] scaffold0291 (1 HSPs)
scaffold0291 (35-112)||(20908-20985)
[»] scaffold0227 (1 HSPs)
scaffold0227 (43-108)||(24857-24922)
[»] scaffold0014 (2 HSPs)
scaffold0014 (125-180)||(228588-228645)
scaffold0014 (127-181)||(227368-227423)
[»] scaffold0129 (2 HSPs)
scaffold0129 (67-112)||(37335-37380)
scaffold0129 (79-112)||(30793-30826)
[»] scaffold0093 (3 HSPs)
scaffold0093 (43-112)||(8967-9036)
scaffold0093 (43-99)||(2741-2797)
scaffold0093 (43-99)||(7364-7420)
[»] scaffold0136 (2 HSPs)
scaffold0136 (125-181)||(35598-35654)
scaffold0136 (125-181)||(638-694)
[»] scaffold0032 (1 HSPs)
scaffold0032 (129-189)||(91041-91101)
[»] scaffold0112 (1 HSPs)
scaffold0112 (43-104)||(36138-36199)
[»] scaffold0039 (1 HSPs)
scaffold0039 (125-183)||(110406-110465)
[»] scaffold1571 (1 HSPs)
scaffold1571 (43-112)||(114-183)
[»] scaffold1147 (1 HSPs)
scaffold1147 (43-112)||(2529-2598)
[»] scaffold0769 (1 HSPs)
scaffold0769 (148-181)||(4176-4209)
[»] scaffold0384 (1 HSPs)
scaffold0384 (148-180)||(4452-4484)
[»] scaffold0142 (1 HSPs)
scaffold0142 (148-180)||(34851-34883)
[»] scaffold0031 (1 HSPs)
scaffold0031 (148-180)||(1827-1859)
[»] scaffold0010 (1 HSPs)
scaffold0010 (148-180)||(26308-26340)


Alignment Details
Target: chr3 (Bit Score: 174; Significance: 2e-93; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 181 - 390
Target Start/End: Original strand, 5335962 - 5336171
Alignment:
Q  181 ttttatttaaaactcatgattgaactgttcgattccacagaggcagcaccgtcaaagttatcatcacttacctcctctttttcttattttgttaaaatga 280  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||||||||||||    
T  5335962 ttttgtttaaaactcatgagtgaactgttcgattccacagaggcagcactgacaaagttatcatcacttacctcctcttttccatattttgttaaaatga 5336061  T
Q  281 tcaaaatgttcaatgtcgatggtcgatgtattccggtgagtttttcccttttttgattcttaactttcctcccaaataatgtagtgacaaattatgatta 380  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  5336062 tcaaaatgttcaatgtcgatggtcgatgtattctggtgagtttttcccttttttgattcttaactttcctcccaaataatgttgtgacaatttatgatta 5336161  T
Q  381 ttagcaacaa 390  Q
    ||||||||||    
T  5336162 ttagcaacaa 5336171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 10615422 - 10615276
Alignment:
Q  33 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 132  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||    
T  10615422 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacaggggg 10615323  T
Q  133 caaaactaaaagtgccctatattacagggggtaaatacctattaacc 179  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||    
T  10615322 caaaaccaaaagtgccctatattacagggggtaaagacctattaacc 10615276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 32 - 180
Target Start/End: Complemental strand, 46610157 - 46610009
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||            |||||||    
T  46610157 tgccacatcattgattctgctgagtcacagggctcagggagcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaattacagggg 46610058  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  46610057 gcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 46610009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 10616681 - 10616833
Alignment:
Q  33 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct--aannnnnnnnnnnnacaggg 130  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||            ||||||    
T  10616681 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaattttttttttttacaggg 10616780  T
Q  131 ggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 182  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||||||||||||    
T  10616781 ggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctt 10616833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 419 - 508
Target Start/End: Original strand, 5336168 - 5336255
Alignment:
Q  419 acaatcaaaaaggtcaaataataaataagtcgttcgatccaattatcatcggctcagtcaggggtggatccagacataccattttggtaa 508  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  5336168 acaatcaaaaaggtcaaataataaataagtcgtttgatccaattatcatcggctcagtc--gggtggatccagacataccattttggtaa 5336255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 28208057 - 28208184
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 134  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||            |||||||| |    
T  28208057 cacatcatagattctgctgagtcacaggactcagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaaaattacaggggg-a 28208155  T
Q  135 aaactaaaagtgccctatattacaggggg 163  Q
    |||| ||||||||||||||||||||||||    
T  28208156 aaaccaaaagtgccctatattacaggggg 28208184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 46597417 - 46597566
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||| ||| ||||| ||||||||||   |||| ||||||||||  ||||||||||||||||||||||||||||||||||            ||||| |    
T  46597417 tgccacctcagagattatgctgagtcaatgggcttagggggcaattgtgaagaatcttcattttacaaggacggaatctaaattgatttttttacaggag 46597516  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  46597517 gcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 46597566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 15086371 - 15086219
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||| ||| |||||||||| |||||   |||| ||||||||||  ||||||||||||||||||||||||||||||||||            |||||||    
T  15086371 tgccacctcagagattctgctaagtcaatgggcttagggggcaattgtgaagaatcttcattttacaaggacggaatctaaatatttttttttacagggg 15086272  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaacccttt 183  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  15086271 gcaaaaccaaaagtgccctatattacaggggggtaaagacctattaacccttt 15086219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 183
Target Start/End: Original strand, 37977429 - 37977566
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 142  Q
    ||||||||||||||||   |||| ||||||||||| |||||| |||||||||||||||||||||||||||            |||||||||||||| |||    
T  37977429 agattctgctgagtcattgggcttagggggcaatcatgaagattcttcattttacaaggacggaatctaattttttttt---acagggggcaaaaccaaa 37977525  T
Q  143 agtgccctatattacagggggtaaatacctattaacccttt 183  Q
    |||| |||||||||||||||||||| |||||||||||||||    
T  37977526 agtgtcctatattacagggggtaaagacctattaacccttt 37977566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 181
Target Start/End: Complemental strand, 28207123 - 28206981
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 134  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||   |||||||||||            |||||||| |    
T  28207123 cacatcatatattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttaca---acggaatctaa--aaaaaaatttacagggggga 28207029  T
Q  135 aaactaaaagtgccctatattacagg-gggtaaatacctattaaccct 181  Q
    |||| ||||||||||||||||||||| |||||||  ||||||||||||    
T  28207028 aaaccaaaagtgccctatattacaggagggtaaagccctattaaccct 28206981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 22256351 - 22256197
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatgg-ctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggg 130  Q
    |||||||||| |||||||||| ||||| |||| || |||||| |||| ||||||||||||||||||||||||||||||||||            ||||||    
T  22256351 tgccacatcaaagattctgctaagtca-atggacttagggggtaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaatagttttacaggg 22256253  T
Q  131 ggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctttta 185  Q
    |||||||| ||||||| | ||||||||| ||||||||| || ||||||||||||||    
T  22256252 ggcaaaaccaaaagtgtcatatattacaggggggtaaagacttattaaccctttta 22256197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 48288270 - 48288349
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatcta 111  Q
    ||||||||||||||||||| ||||||||| |||||||| ||| ||| ||||||||||| |||||||||||||||||||||    
T  48288270 tgccacatcatagattctgttgagtcacagggctcaggaggcgatcctgaagaatctttattttacaaggacggaatcta 48288349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 43930712 - 43930789
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||||||||||||   || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  43930712 cacatcatagattctgctgagtcacagaactgagggggcaatcttgaagaatctttattttacaaggatggaatctaa 43930789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 2011872 - 2011949
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||||||||||| | || ||||||| ||||| ||||||||||| ||||||||||||  ||||||||    
T  2011872 cacatcatagattctgctgagtcatagggttcaggggacaatcctgaagaatctttattttacaaggatagaatctaa 2011949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 24528471 - 24528548
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatc 109  Q
    |||||||||| |||||||||||||||| | |||||||||| ||||||| |||||| || ||||||| |||||||||||    
T  24528471 tgccacatcagagattctgctgagtcatagggctcaggggacaatcttaaagaatatttattttacgaggacggaatc 24528548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 181
Target Start/End: Complemental strand, 46596232 - 46596094
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 142  Q
    |||||||||||||||| | || ||| ||||||||| ||||||||||| ||||||||| || |||||||||            ||| ||| |||||| |||    
T  46596232 agattctgctgagtcataggggtcatggggcaatcctgaagaatctttattttacaatgatggaatctaagtttttttttttacatgggacaaaaccaaa 46596133  T
Q  143 agtgccctatattacagggggtaaatacctattaaccct 181  Q
    ||| |||||||||||||||||||||   |||||||||||    
T  46596132 agtaccctatattacagggggtaaagctctattaaccct 46596094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 2011201 - 2011124
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| | |||||||||||||||| |||  || |||||||| ||||||||||| ||||||||||||| ||||||||    
T  2011201 cacatcaaatattctgctgagtcacaaggcatagagggcaatcctgaagaatctttattttacaaggacagaatctaa 2011124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 15093633 - 15093702
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||| ||||||| | || ||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  15093633 agattctgttgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggatggaatctaa 15093702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 18142199 - 18142256
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||    
T  18142199 acagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccctt 18142256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 48044329 - 48044276
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaac 178  Q
    |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||    
T  48044329 acagggggcaaaaccaaaagtgccctatatcacagggggtaaagacctattaac 48044276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 51386329 - 51386406
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| |||||||||||| ||| |||||||||| ||||||  |||||||| || ||||||| ||||||||||||||    
T  51386329 cacatcagagattctgctgactcaaatggctcaggaggcaattctgaagaattttaattttacgaggacggaatctaa 51386406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 54567747 - 54567800
Alignment:
Q  127 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  54567747 agggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 54567800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 43930052 - 43929976
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatcta 111  Q
    ||||||| ||||||||||||||||||  ||  |||||||| ||||||| |||||| |||||||||||||| ||||||    
T  43930052 cacatcaaagattctgctgagtcacaatgcatagggggcattcttgaataatctttattttacaaggacgaaatcta 43929976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 27360558 - 27360492
Alignment:
Q  33 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaa 99  Q
    ||||||||||||||| |||||||||| | ||||||||||  |||| ||||||||||| |||||||||    
T  27360558 gccacatcatagattttgctgagtcatagggctcaggggagaatcctgaagaatctttattttacaa 27360492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 18140995 - 18140938
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||  |||||||||||||    
T  18140995 acagggagcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccctt 18140938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 18705095 - 18704971
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||| |       |||||||||| ||||||||||| |||| ||||||| |||||||||            |||||||    
T  18705095 tgccacatcatagattctgctgagtcaaa-------gggggcaatcctgaagaatctttatttgacaaggaaggaatctaaaaaaaaaaatttacagggg 18705003  T
Q  132 gcaaaactaaaagtgccctatattacaggggg 163  Q
    | ||||| |||||||||||||||||| |||||    
T  18705002 ggaaaaccaaaagtgccctatattactggggg 18704971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 27315331 - 27315262
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||   || ||||||||||||| |||| |||||| ||||||||||||||| ||||||    
T  27315331 agattctgctgagtcattgggatcagggggcaatcctgaaaaatctttattttacaaggacgggatctaa 27315262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 22257243 - 22257390
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||| ||| ||||| || ||| ||| | ||||| ||||| |||| ||||||||||| ||||||||||||| ||||||||            ||| |||    
T  22257243 tgccacgtcagagattatgttgactcaaagggctcggggggaaatcctgaagaatctttattttacaaggacagaatctaa--aaaaaaaattacaaggg 22257340  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccc 180  Q
    ||||||| |||||||||||||| |||| ||||||||| ||||||||||||    
T  22257341 gcaaaacaaaaagtgccctataatacaggggggtaaagacctattaaccc 22257390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 27318226 - 27318151
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 110  Q
    ||||||||| ||||| |||||||||| |||||| | | ||||| ||||||||||| ||||||||| ||| ||||||    
T  27318226 cacatcatatattctactgagtcacagggctcatgagacaatcctgaagaatctttattttacaaagacagaatct 27318151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 181
Target Start/End: Original strand, 38843470 - 38843608
Alignment:
Q  43 agattctgctgagtcacatgg-ctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaa 141  Q
    |||||||||||||||| |||| || ||||||||||| ||| |||||||||||||| |||||||| ||||||            |||||||||||||| ||    
T  38843470 agattctgctgagtca-atggacttagggggcaatcgtgacgaatcttcattttataaggacgggatctaa-aatttttttttacagggggcaaaaccaa 38843567  T
Q  142 aagtgccctatattac-agggggtaaatacctattaaccct 181  Q
    ||||| |||||||||| | |||||||| |||||| ||||||    
T  38843568 aagtgtcctatattacaaaggggtaaagacctatcaaccct 38843608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 51385732 - 51385665
Alignment:
Q  45 attctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| || ||| |||||||||||| ||||  ||||||||||| ||||||| ||||||||||||||    
T  51385732 attctgccgactcaaatggctcaggggacaattatgaagaatcttgattttacgaggacggaatctaa 51385665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 14826031 - 14826133
Alignment:
Q  79 tgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaac 178  Q
    ||||||||||| ||||||||||||||||||||||            |||||||||||||| ||||||| |  |||||||||||||||||   ||||||||    
T  14826031 tgaagaatctttattttacaaggacggaatctaaaaaaaatattttacagggggcaaaaccaaaagtgacaaatattacagggggtaaaacactattaac 14826130  T
Q  179 cct 181  Q
    |||    
T  14826131 cct 14826133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 52396360 - 52396426
Alignment:
Q  36 acatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaagga 102  Q
    |||||| ||||| |||||||||||| |||  | ||||||||||||||||||||| |||||| |||||    
T  52396360 acatcaaagattttgctgagtcacagggcataaggggcaatcttgaagaatctttattttataagga 52396426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 7248920 - 7248863
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||| |||| ||  |||||||||||||||||||  |||||||||||||    
T  7248920 acagggggcaaaaccaaaaatgatctatattacagggggtaaaggcctattaaccctt 7248863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 23545445 - 23545514
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||| || |||  ||| ||||||||||||| ||||||||||||||||||| | || |||||||||    
T  23545445 agattctgcggactcaactgggtcagggggcaatcctgaagaatcttcattttacgatgatggaatctaa 23545514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 24909435 - 24909378
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    ||||| |||||||| |||| |  ||||||||||||||||||||| |||||||||||||    
T  24909435 acaggaggcaaaaccaaaatttacctatattacagggggtaaatgcctattaaccctt 24909378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 31835843 - 31835900
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||  ||||||| | |||||||||||||||||| || |||||||||||    
T  31835843 acagggggcaaaatcaaaagtgtcatatattacagggggtaaagacatattaaccctt 31835900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 38842255 - 38842186
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||| | || |||| || || || ||||||||||| ||||||||||||| ||||||||    
T  38842255 agattctgctgagtcataggggtcagaggacattcctgaagaatctttattttacaaggacagaatctaa 38842186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 51460774 - 51460822
Alignment:
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    ||||| |||| || |||||||||||||||||||| ||||||||||||||    
T  51460774 aaaacaaaaaatgacctatattacagggggtaaagacctattaaccctt 51460822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 4218868 - 4218923
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatatta-cagggggtaaatacctattaacc 179  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||  ||||||||||    
T  4218868 acagggggcaaaaccaaaagtgacctatattaccagggggtaaaggcctattaacc 4218923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 12066279 - 12066228
Alignment:
Q  130 gggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    ||||||||  ||||||| |||||||||||||||||||| | |||||||||||    
T  12066279 gggcaaaatcaaaagtgacctatattacagggggtaaaaaactattaaccct 12066228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 12210079 - 12210028
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||| ||||||| ||||||||||||||||||||   ||||||||||    
T  12210079 ggggcaaaaccaaaagtgacctatattacagggggtaaaagtctattaaccc 12210028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 14824852 - 14824769
Alignment:
Q  79 tgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccctatattacagggg 162  Q
    ||||||||||| ||||||||||||||||||||||            |||||||||||||  ||||||| |||||||||||||||    
T  14824852 tgaagaatctttattttacaaggacggaatctaaaaaaaatattttacagggggcaaaatcaaaagtgacctatattacagggg 14824769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 29184983 - 29185038
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    ||||| |||||||| ||||||| |||||||||||||| |||||  |||||||||||    
T  29184983 acaggaggcaaaaccaaaagtgacctatattacagggagtaaaggcctattaaccc 29185038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 49265297 - 49265352
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 184  Q
    |||| ||||| ||||||| |||||||||||| | |||||| |||||||||||||||    
T  49265297 gggggaaaaccaaaagtgacctatattacagagagtaaatgcctattaaccctttt 49265352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 182
Target Start/End: Complemental strand, 23539377 - 23539260
Alignment:
Q  67 agggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccctatattaca--gggggt 164  Q
    ||||||||||| | ||||||||||||||||| |||| |||||||||            |||||||||||||| |||||||   |||||||||  ||||||    
T  23539377 agggggcaatcctaaagaatcttcattttacgaggatggaatctaaatttttttttttacagggggcaaaaccaaaagtggtgtatattacagggggggt 23539278  T
Q  165 aaatacctattaaccctt 182  Q
    |||  |||||||||||||    
T  23539277 aaaggcctattaaccctt 23539260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 167
Target Start/End: Complemental strand, 51116267 - 51116225
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaa 167  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||    
T  51116267 acaggaggcaaaactaaaattgccatatattacagggggtaaa 51116225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 6510247 - 6510214
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  6510247 cctatattacagggggtaaagacctattaaccct 6510214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 11359508 - 11359455
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||| ||||| ||||||| |||||||| |||||||||||  |||||||||||||    
T  11359508 gggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaaccctt 11359455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 16386511 - 16386580
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||   || | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  16386511 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 16386580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 20957195 - 20957228
Alignment:
Q  149 ctatattacagggggtaaatacctattaaccctt 182  Q
    ||||||||||||||||||| ||||||||||||||    
T  20957195 ctatattacagggggtaaagacctattaaccctt 20957228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 24842958 - 24842889
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||   || | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  24842958 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 24842889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 27497829 - 27497796
Alignment:
Q  150 tatattacagggggtaaatacctattaacccttt 183  Q
    |||||||||||||||||| |||||||||||||||    
T  27497829 tatattacagggggtaaagacctattaacccttt 27497796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 37976105 - 37976037
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||| | || ||  | ||||||| || |||||||| ||||||||||||||||||||||    
T  37976105 agattctgctgagtcataggggtc-tgaggcaatcctggagaatctttattttacaaggacggaatctaa 37976037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 38343236 - 38343179
Alignment:
Q  128 gggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttta 185  Q
    ||||||||||  ||||||| | ||||||||||| ||||||  ||||||||||||||||    
T  38343236 gggggcaaaatcaaaagtgacatatattacaggaggtaaaggcctattaaccctttta 38343179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 45291471 - 45291418
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||| ||||||| |||||||||||||||||||   | |||||||||||    
T  45291471 ggggcaaaaccaaaagtgacctatattacagggggtaagggcatattaaccctt 45291418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 49872974 - 49873007
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  49872974 cctatattacagggggtaaagacctattaaccct 49873007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 15093716 - 15093772
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||  |||||| |||||||||| ||||||||||   |||||||||||    
T  15093716 acagggggcaaaatcaaaagtaccctatattatagggggtaaagttctattaaccct 15093772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 30271590 - 30271542
Alignment:
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||| || |||||||||||| ||||||| | ||||||||||||    
T  30271590 aaaactaaaaatgacctatattacagagggtaaagaactattaaccctt 30271542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 37976023 - 37975987
Alignment:
Q  127 agggggcaaaactaaaagtgccctatattacaggggg 163  Q
    |||||||||||| |||||| |||||||||||||||||    
T  37976023 agggggcaaaaccaaaagtaccctatattacaggggg 37975987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 47115587 - 47115619
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  47115587 cctatattacagggggtaaagacctattaaccc 47115619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 49880762 - 49880794
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  49880762 cctatattacagggggtaaagacctattaaccc 49880794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 51252286 - 51252346
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacaggggg-taaatacctattaaccctttt 184  Q
    |||||||| ||||| | || || |||||||||||||||| |||| ||||||||||||||||    
T  51252286 acaggggggaaaaccagaaatgacctatattacagggggataaagacctattaaccctttt 51252346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 1e-48; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 34 - 188
Target Start/End: Original strand, 38937419 - 38937573
Alignment:
Q  34 ccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggc 133  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            | |||||||    
T  38937419 ccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaattttttttttttatagggggc 38937518  T
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaacccttttattt 188  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  38937519 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctattattt 38937573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 1903078 - 1902929
Alignment:
Q  33 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 132  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||    
T  1903078 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacaggggg 1902979  T
Q  133 caaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  1902978 caaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 1902929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 1904317 - 1904467
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  1904317 tgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaattttttttcacagggg 1904416  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  1904417 gcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 1904467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 32 - 180
Target Start/End: Complemental strand, 7576473 - 7576325
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||            |||||||    
T  7576473 tgccacatcatagattctgctgagtcacatggctcagggg-caatcttgaagaatcttcattttacaaggacggaatctaaaaaaaatattttacagggg 7576375  T
Q  132 gcaaaactaaaagtgccctatattacaggggg-taaatacctattaaccc 180  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  7576374 gcaaaaccaaaagtgccctatattacagggggataaagacctattaaccc 7576325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 32 - 180
Target Start/End: Complemental strand, 44367016 - 44366867
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  44367016 tgccacatcatagattctgctgagtcacagagctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggg 44366917  T
Q  132 gcaaaactaaaagtgccctatattacaggg-ggtaaatacctattaaccc 180  Q
    ||||||| |||||||||||||||||||||| | |||| ||||||||||||    
T  44366916 gcaaaaccaaaagtgccctatattacagggagttaaagacctattaaccc 44366867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 7577693 - 7577837
Alignment:
Q  40 catagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaact 139  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||            |||||||| |||||     
T  7577693 catagattctgctgagtcacaaggctcagggggcaatcttgatgaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggggtaaaacc 7577792  T
Q  140 aaaagtgccctatattaca-gggggtaaatacctattaacccttt 183  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||    
T  7577793 aaaagtgccctatattacaggggggtaaagacctattaacccttt 7577837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 38815002 - 38815150
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            |||| ||    
T  38815002 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa-attttttttttacagagg 38815100  T
Q  132 gcaaaactaaaagtgccctatattacagggg-gtaaatacctattaaccc 180  Q
    ||||||| ||||||||| ||||||||||||| ||||| ||||||||||||    
T  38815101 gcaaaaccaaaagtgccttatattacaggggagtaaagacctattaaccc 38815150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 32 - 180
Target Start/End: Complemental strand, 38936092 - 38935945
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            |||| ||    
T  38936092 tgccacatcattgattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttttttttttacagtgg 38935993  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    ||||||| ||||||| ||||||||||| |||||||| ||||||||||||    
T  38935992 gcaaaaccaaaagtgtcctatattaca-ggggtaaagacctattaaccc 38935945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 38937076 - 38936998
Alignment:
Q  34 ccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38937076 ccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 38936998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 16670647 - 16670495
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatg-gctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggg 130  Q
    |||||||||| |||||||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||| ||||||||||||            ||||||    
T  16670647 tgccacatcaaagattctgctgagtca-atgagcttagggggcaatcgtgaagaatcttcattttacaatgacggaatctaaaaaaaaaaaattacaggg 16670549  T
Q  131 ggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 184  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  16670548 ggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccttttt 16670495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 21904073 - 21903993
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21904073 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaa 21903993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 38876135 - 38876058
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38876135 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaa 38876058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 36 - 181
Target Start/End: Original strand, 38876934 - 38877079
Alignment:
Q  36 acatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaa 135  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||            |||||  | ||    
T  38876934 acatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaaatttacaggaaggaa 38877033  T
Q  136 aactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    ||| ||||||||| ||||||||||||||||||  ||||||||||||    
T  38877034 aaccaaaagtgccttatattacagggggtaaagccctattaaccct 38877079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 38813724 - 38813644
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  38813724 tgccacatcatagattctgctgagtcacagggcttagggggcaatcttgaagaatattcattttacaaggacggaatctaa 38813644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 23834729 - 23834578
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||| ||||||||||||||||   |||| ||||| ||||| ||||||||||||||||||||||||||||||||||            |||||||    
T  23834729 tgccacatcaaagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttcattttacaaggacggaatctaa-aaaaaaaaattacagggg 23834631  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaacccttt 183  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  23834630 gcaaaaccaaaagtgccctatattacaggggggtaaagacctattaacccttt 23834578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 32 - 182
Target Start/End: Original strand, 23835682 - 23835831
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||| |||||| |||||||||   |||| ||| | | ||| ||||||||||||||||||||||||||||||| |             |||||||    
T  23835682 tgccacatcaaagattccgctgagtcaatgggcttaggagacgatcgtgaagaatcttcattttacaaggacggaatcga-ttttttttttttacagggg 23835780  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23835781 gcaaaactaaaagtgccctatattacagggggtaaagacctattaaccctt 23835831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 11101239 - 11101163
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  11101239 cacatcatagattctgctgagtcacaacgctcagggggcaatcttgaagaatctttatttt-caaggacggaatctaa 11101163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 18250798 - 18250950
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||| ||||| ||||||||||||||||   |||| ||||  ||||| ||||||||||||||||||||||||||||||||||            ||||| |    
T  18250798 tgccgcatcaaagattctgctgagtcaatgggcttagggaacaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaattacaggag 18250897  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaacccttt 183  Q
    ||||||| |||| |||||||||||||| ||||||||| |||||||||||||||    
T  18250898 gcaaaaccaaaaatgccctatattacaggggggtaaagacctattaacccttt 18250950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 44368293 - 44368373
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||| |||||||||||||||||  || | ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  44368293 tgccacatcaaagattctgctgagtcactgggtttagggggcaatcgtgaagaatcttcattatacaaggacggaatctaa 44368373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 181
Target Start/End: Complemental strand, 18249776 - 18249630
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 134  Q
    ||||||| ||||||||||||||||   |||| ||||||||||| ||||||||||||||||||||||||| ||||||||            ||||| | ||    
T  18249776 cacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacagaatctaa-aaaaaaaatttacaggagaca 18249678  T
Q  135 aaactaaaagtgccctatattac-agggggtaaatacctattaaccct 181  Q
    |||| ||||||||| |||||||| |||||||||| |||||||||||||    
T  18249677 aaaccaaaagtgccatatattacaagggggtaaagacctattaaccct 18249630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 31552050 - 31551974
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||||||||||||| |||||||||||||| | |||| ||| || ||||||||||||||||||||||    
T  31552050 cacatcatagattctgctgagtcacaaggctcagggggcaaacatgaaaaat-tttattttacaaggacggaatctaa 31551974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 16671712 - 16671791
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatg-gctcagggggcaatcttgaagaatcttcattttacaaggacggaatcta 111  Q
    |||||||||| |||||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||    
T  16671712 tgccacatcaaagattctgctgagtca-atgagcttagggggcaatcgtgaagaatcttcattttacaagaacggaatcta 16671791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 41306030 - 41305950
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||| ||||||||||||||||   || | ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  41306030 tgccacatcagagattctgctgagtcaatgggtttagggggcaatcgtgaagaagcttcattttacaaggacggaatctaa 41305950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 36565381 - 36565304
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| ||||||||||||||| || |||  | ||||||||| ||||||||||| ||||||||||||||||||||||    
T  36565381 cacatcaaagattctgctgagtcccaaggcatatggggcaatcctgaagaatctttattttacaaggacggaatctaa 36565304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 5970665 - 5970745
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||| ||| ||||||||||||||||   |||| ||||| ||||| |||||||||||||||||||||| |||||||||||    
T  5970665 tgccacctcagagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttcattttacaagaacggaatctaa 5970745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 5969876 - 5969797
Alignment:
Q  33 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| | |||||||||||||||| | || ||||||| ||||| | ||||||||| ||||||||||||||||||||||    
T  5969876 gccacataagagattctgctgagtcataggggtcaggggacaatcattaagaatctttattttacaaggacggaatctaa 5969797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 10355151 - 10355076
Alignment:
Q  37 catcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| |||||||||| |||||||| | ||||| ||||| ||||||||||| |||| |||||||||||||||||    
T  10355151 catcataaattctgctgaatcacatggtttaggggacaatcctgaagaatctttatttgacaaggacggaatctaa 10355076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 19686183 - 19686238
Alignment:
Q  127 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||| ||||||||||||||||||||||||||||   ||||||||||||    
T  19686183 agggggcaaaaccaaaagtgccctatattacagggggtaaagcactattaaccctt 19686238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 11102077 - 11102154
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| ||||| ||||||||||||  ||  | ||| ||||||||||||||||| |||||| |||||||||||||||    
T  11102077 cacatcaaagattatgctgagtcacagtgcatatgggacaatcttgaagaatctttattttaaaaggacggaatctaa 11102154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 22293460 - 22293533
Alignment:
Q  39 tcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||| ||| | ||||  |||||||||  ||||||||||| ||||||||||||| ||||||||    
T  22293460 tcatagattctgctgactcaaagggcttggggggcaatactgaagaatctttattttacaaggaccgaatctaa 22293533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 41307056 - 41307136
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||| ||| ||||||||||||  || | ||||| ||||||||||||||||||| || ||||||||| |||| |||||||    
T  41307056 tgccacgtcagagattctgctgacccaaagggctcggggggcaatcttgaagaatatttattttacaaagacgaaatctaa 41307136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 22292597 - 22292547
Alignment:
Q  62 ggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||| ||||||||||| |||||||||||||||||||||||||  |||||||    
T  22292597 ggcttagggggcaatcgtgaagaatcttcattttacaaggacaaaatctaa 22292547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 10355232 - 10355301
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacg 104  Q
    ||||||| ||||| |||||||||| | |||  ||||| ||||| ||||||||||| ||||||||||||||    
T  10355232 cacatcaaagattatgctgagtcatagggcataggggacaatcctgaagaatctttattttacaaggacg 10355301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 15749010 - 15749067
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||| ||||||| | ||||||||||||| ||||  |||||||||||||    
T  15749010 acagggggcaaaaccaaaagtgacatatattacaggggataaaagcctattaaccctt 15749067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 22468226 - 22468283
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||  ||||||||||||    
T  22468226 acagggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccct 22468283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 22474447 - 22474504
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||  ||||||||||||    
T  22474447 acagggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccct 22474504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 39151237 - 39151306
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||| ||| | |||| ||| ||||||  ||||||||||| ||||||||||||| ||||||||    
T  39151237 agattctgctgactcaaagggcttaggaggcaattctgaagaatctttattttacaaggacagaatctaa 39151306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 30371440 - 30371384
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||| ||||| |||| || |||||||||||||| ||||| |||||||||||||    
T  30371440 acaggggggaaaaccaaaaatgacctatattacagggagtaaagacctattaaccct 30371384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 22467037 - 22466982
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaacc 179  Q
    ||||||| |||||| ||||||| |||||||||||| |||||||| |||||||||||    
T  22467037 acaggggacaaaaccaaaagtgacctatattacaggggggtaaagacctattaacc 22466982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 28141743 - 28141684
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 184  Q
    |||||| | ||||| ||||||| |||||||||||||||||||| | ||||||| ||||||    
T  28141743 acagggtgtaaaaccaaaagtgacctatattacagggggtaaagatctattaatcctttt 28141684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 31551673 - 31551598
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 110  Q
    ||||||| ||||||| |||||||||| ||    |||||||||| | |||||| |||||||||| ||||||||||||    
T  31551673 cacatcaaagattctactgagtcacagggtatggggggcaatcctaaagaattttcattttacgaggacggaatct 31551598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 44242357 - 44242412
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||| |||||||  |||||||||||| ||||||  |||||||||||    
T  44242357 acagggggcaaaaccaaaagtgatctatattacaggaggtaaaggcctattaaccc 44242412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 17328124 - 17328090
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||||||||| ||||||||||||||    
T  17328124 cctatattacagggggtaaagacctattaaccctt 17328090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 18416612 - 18416662
Alignment:
Q  62 ggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||| |||||||||| | ||||||||| ||||||| ||||||||||||||    
T  18416612 ggctcggggggcaatcctaaagaatctttattttacgaggacggaatctaa 18416662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 21903979 - 21903921
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggg-gtaaatacctattaaccctt 182  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||  || ||||||||||    
T  21903979 acaggggggaaaaccaaaagtgccctatattacaggggtgtaaagccccattaaccctt 21903921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 28462495 - 28462553
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacaggggg-taaatacctattaaccctt 182  Q
    |||||| ||||||| ||||||| |||||||||||||||| ||||  |||||||||||||    
T  28462495 acagggtgcaaaaccaaaagtgacctatattacagggggataaaggcctattaaccctt 28462553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 45161383 - 45161440
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||   |||||||||||||    
T  45161383 acaggaggcaaaaccaaaagtgccctatattaca-ggggtaaaacactattaacccttt 45161440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 183
Target Start/End: Original strand, 3364588 - 3364621
Alignment:
Q  150 tatattacagggggtaaatacctattaacccttt 183  Q
    |||||||||||||||||| |||||||||||||||    
T  3364588 tatattacagggggtaaagacctattaacccttt 3364621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 8238044 - 8237987
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||| |||||||  |||||||||| ||||||||   ||||||||||||    
T  8238044 acagggggcaaaaccaaaagtgttctatattacatggggtaaaacactattaaccctt 8237987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 15747798 - 15747749
Alignment:
Q  133 caaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||| ||||||| ||||||||||||||||||||   ||||||||||||    
T  15747798 caaaaccaaaagtgacctatattacagggggtaaaggtctattaaccctt 15747749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 16577372 - 16577405
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  16577372 cctatattacagggggtaaagacctattaaccct 16577405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 183
Target Start/End: Original strand, 19052200 - 19052233
Alignment:
Q  150 tatattacagggggtaaatacctattaacccttt 183  Q
    |||||||||||||||||| |||||||||||||||    
T  19052200 tatattacagggggtaaagacctattaacccttt 19052233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 19493473 - 19493506
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  19493473 cctatattacagggggtaaagacctattaaccct 19493506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 22116187 - 22116154
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  22116187 cctatattacagggggtaaagacctattaaccct 22116154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 34635738 - 34635705
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  34635738 cctatattacagggggtaaagacctattaaccct 34635705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 44241152 - 44241095
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    ||||||| |||||| |||| || |||||||||||||| |||||  |||||||||||||    
T  44241152 acaggggacaaaaccaaaaatgacctatattacagggagtaaagtcctattaaccctt 44241095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 19641478 - 19641446
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  19641478 cctatattacagggggtaaagacctattaaccc 19641446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 19840071 - 19840039
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  19840071 cctatattacagggggtaaagacctattaaccc 19840039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 20182296 - 20182256
Alignment:
Q  148 cctatattacagggggtaaatacctattaacccttttattt 188  Q
    ||||||||||||||| |||| ||||||||||||| ||||||    
T  20182296 cctatattacaggggataaaaacctattaaccctattattt 20182256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 22535486 - 22535450
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctttt 184  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  22535486 cctatattaaagggggtaaagacctattaaccctttt 22535450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 23260352 - 23260316
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctttt 184  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  23260352 cctatattacagggagtaaagacctattaaccctttt 23260316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 28149691 - 28149723
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  28149691 cctatattacagggggtaaaaacctattaaccc 28149723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 29835134 - 29835102
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  29835134 cctatattacagggggtaaagacctattaaccc 29835102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 37147583 - 37147551
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  37147583 cctatattacagggggtaaagacctattaaccc 37147551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 38385967 - 38385931
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctttt 184  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  38385967 cctatattacagggggtaaagacctattaaccttttt 38385931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 41305935 - 41305880
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||| ||||| ||| ||||| ||||||||||||| |||||||| |||||||||||||    
T  41305935 acagagggcagaaccaaaagcgccctatattaca-ggggtaaagacctattaaccct 41305880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 5e-48; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 15061732 - 15061881
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  15061732 tgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttatttttttacagggg 15061831  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15061832 gcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 15061881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 15615251 - 15615102
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||            || ||||    
T  15615251 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcaatttacaaggacggaatctaaaaaaaaaattttaccgggg 15615152  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
     |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15615151 acaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 15615102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 33 - 182
Target Start/End: Complemental strand, 11956287 - 11956137
Alignment:
Q  33 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 132  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||     
T  11956287 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacaggggc 11956188  T
Q  133 caaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 182  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||||||    
T  11956187 caaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctt 11956137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 33 - 182
Target Start/End: Complemental strand, 15060311 - 15060161
Alignment:
Q  33 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 132  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||    
T  15060311 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaatttttacaggggg 15060212  T
Q  133 caaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 182  Q
    |||||| ||||||| ||||||||||| ||||||||| ||||||||||||||    
T  15060211 caaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctt 15060161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 41064293 - 41064143
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  41064293 tgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacagggg 41064194  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  41064193 gcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 41064143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 21776815 - 21776964
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  21776815 tgccacatcatagattctgctgagtcacagggcttagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggg 21776914  T
Q  132 gcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccc 180  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  21776915 gcaaaaccaaaagtgccctatattacagaggggtaaagacctattaaccc 21776964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 32 - 180
Target Start/End: Complemental strand, 30796727 - 30796579
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||            ||| |||    
T  30796727 tgccacatcatagattctgctgagtcacagggctcagggtgcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacaaggg 30796628  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    ||||||| ||||||||||||||||| |||||||||| ||||||||||||    
T  30796627 gcaaaaccaaaagtgccctatattatagggggtaaagacctattaaccc 30796579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 32 - 182
Target Start/End: Original strand, 15616408 - 15616559
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  15616408 tgccagatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttttttttttacagggg 15616507  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 182  Q
    ||||||| ||||||| ||||||||||| ||||||||| ||||||||||||||    
T  15616508 gcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctt 15616559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 11957557 - 11957707
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||            |||||||    
T  11957557 tgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcgtcattttacaaggacggaatctaaaaaaaaaattttacagggg 11957656  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  11957657 gcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 11957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 41065566 - 41065716
Alignment:
Q  33 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 132  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||            |||||||     
T  41065566 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggaaggaatctaaaaaaaaaattttacaggggc 41065665  T
Q  133 caaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 182  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||||||    
T  41065666 caaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctt 41065716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 35 - 181
Target Start/End: Original strand, 30798490 - 30798636
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 134  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||    
T  30798490 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaattacagggggca 30798589  T
Q  135 aaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||  || ||||||||||||||  ||||||||| |||||||||||||    
T  30798590 aaatcaatagtgccctatattaaggggggtaaagacctattaaccct 30798636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 21775610 - 21775485
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||            ||| |||    
T  21775610 tgccacatcatagattctgctgagtcatagggttcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaattttttttttacaaggg 21775511  T
Q  132 gcaaaactaaaagtgccctatattac 157  Q
    ||||||| ||||||||||||||||||    
T  21775510 gcaaaaccaaaagtgccctatattac 21775485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 29520283 - 29520203
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||||||||||||||   |||| ||||||||||| ||||||||||||||||||||| ||||||||||||    
T  29520283 tgccacatcatagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaagacggaatctaa 29520203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 10012716 - 10012796
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||| ||||||||||||||||   |||| ||||||||||| |||||||||||||||||||||||||| |||||||    
T  10012716 tgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacgaaatctaa 10012796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 29521338 - 29521418
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||| ||||||||||||||||   |||| ||| ||||||| ||||||||||||||||||||||||||||||||||    
T  29521338 tgccacatcaaagattctgctgagtcattgggcttaggaggcaatcgtgaagaatcttcattttacaaggacggaatctaa 29521418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 43 - 181
Target Start/End: Complemental strand, 11438476 - 11438338
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 142  Q
    |||||||||||||||| | || ||||||| ||||| ||||||||||| |||||||| |||||||||||||            |||||| ||||||| |||    
T  11438476 agattctgctgagtcataggggtcaggggacaatcctgaagaatctttattttacatggacggaatctaaaaaaaaaaatttacagggagcaaaaccaaa 11438377  T
Q  143 agtgccctatattacagggggtaaatacctattaaccct 181  Q
    ||| |||||||||||||||||||||   |||||||||||    
T  11438376 agtaccctatattacagggggtaaagctctattaaccct 11438338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 40434623 - 40434544
Alignment:
Q  33 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||| ||||||||||||||||   |||| ||||| ||||| |||||||||||||||||||||||| |||||||||    
T  40434623 gccacatcagagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttcattttacaaggatggaatctaa 40434544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 8367907 - 8367983
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatg-gctcagggggcaatcttgaagaatcttcattttacaaggacggaat 108  Q
    |||||||||| ||||||||||| |||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  8367907 tgccacatcaaagattctgctgcgtca-atgagcttagggggcaatcgtgaagaatcttcattttacaaggacggaat 8367983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 40434315 - 40434394
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||| ||||||||||||||||   |||| ||||||||||  |||||||| |||||||||||||||||||||||||    
T  40434315 tgccacatcaaagattctgctgagtcaatgggcttagggggcaattgtgaagaat-ttcattttacaaggacggaatctaa 40434394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 9751678 - 9751737
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 184  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||    
T  9751678 acagggggcaaaaccaaaagtgacctatattacagggggtaaaagcctattaaccctttt 9751737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 33751049 - 33750986
Alignment:
Q  49 tgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||| | || ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  33751049 tgctgagtcatagggatcagggggcaatcctgaagaatctttattttacaaggacggaatctaa 33750986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 11439708 - 11439784
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaat 108  Q
    |||||| ||| ||||||||||||||||   |||| || |||||||  ||||||||||||||||||||||||||||||    
T  11439708 tgccacctcagagattctgctgagtcaatgggcttagtgggcaattgtgaagaatcttcattttacaaggacggaat 11439784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 180
Target Start/End: Complemental strand, 37274883 - 37274748
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 142  Q
    |||||||||||||||| | |  | ||||||||||| ||||||||||| ||||||||||||||||||| ||            |||||||||||||| |||    
T  37274883 agattctgctgagtcataggagttagggggcaatcctgaagaatctttattttacaaggacggaatcaaa--aaaaaaaattacagggggcaaaaccaaa 37274786  T
Q  143 agtgccctatattacagggggtaaatacctattaaccc 180  Q
    ||| |||||||||| ||||||||||   ||||||||||    
T  37274785 agtaccctatattatagggggtaaagctctattaaccc 37274748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 13948584 - 13948638
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 179  Q
    |||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||    
T  13948584 acagggggcaaaaccaaaagtgccctatattacaggaggtaaaggcctattaacc 13948638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 28819591 - 28819537
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 179  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||    
T  28819591 acagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaacc 28819537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 4061429 - 4061498
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||| |||||||||| | || ||||||| ||||| ||||||||||| |||||||||||||| |||||||    
T  4061429 agattttgctgagtcataagggtcaggggacaatcctgaagaatctttattttacaaggacgaaatctaa 4061498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 40434123 - 40434055
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||| ||| |  |||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  40434123 agattctgctgactcaaagagctc-gggggcaatcctgaagaatctttattttacaaggacggaatctaa 40434055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 33847226 - 33847179
Alignment:
Q  65 tcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  33847226 tcagggggcaatcctgaagaatctttattttacaaggacagaatctaa 33847179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 10011671 - 10011611
Alignment:
Q  127 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttttattt 188  Q
    |||||||||||| ||||||| ||||||||||| ||| |||| ||||||||| ||||||||||    
T  10011671 agggggcaaaaccaaaagtgtcctatattacacgggataaagacctattaa-ccttttattt 10011611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 29104490 - 29104437
Alignment:
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaacccttttatt 187  Q
    |||||| ||| || |||||||||||||||||||| |||||||||||||| ||||    
T  29104490 aaaactgaaaatgacctatattacagggggtaaagacctattaacccttatatt 29104437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 11439803 - 11439855
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||| |||||||| |||||||||||| | |||| |||||||||||||    
T  11439803 ggggcaaaaccaaaagtgctctatattacaggagataaagacctattaaccct 11439855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 19600024 - 19599968
Alignment:
Q  127 agggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccctt 182  Q
    |||||||||||| ||||||| |||||||||||| ||||||||  |||||||||||||    
T  19600024 agggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccctt 19599968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 26034900 - 26034836
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttttattta 189  Q
    |||||||| ||||| |||| || |||||||| ||| ||||||| |||||||||||||||| ||||    
T  26034900 acagggggaaaaaccaaaaatgacctatattgcagagggtaaagacctattaaccctttttttta 26034836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 8368006 - 8368057
Alignment:
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    ||||||| |||||||| ||||| ||||| ||||||| |||||||||||||||    
T  8368006 gcaaaaccaaaagtgctctatactacagagggtaaagacctattaacccttt 8368057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 10976772 - 10976815
Alignment:
Q  148 cctatattacagggggtaaatacctattaacccttttatttaaa 191  Q
    |||||||||||||||||||| ||||||||||||| | |||||||    
T  10976772 cctatattacagggggtaaagacctattaaccctataatttaaa 10976815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 11890101 - 11890155
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||  |||||||||||    
T  11890101 acagggggcaaaaccaaaagtgacctatattaca-ggggtaaaggcctattaaccc 11890155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 33751944 - 33752011
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 110  Q
    |||||||| ||||||| | ||  |||||| |||||||||||||| || ||||||||| ||||||||||    
T  33751944 agattctgatgagtcatagggggcaggggacaatcttgaagaatttttattttacaatgacggaatct 33752011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 10011725 - 10011683
Alignment:
Q  69 ggggcaatcttgaagaatcttcattttacaaggacggaatcta 111  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||    
T  10011725 ggggcaatcgtgaagaatctttattttataaggacggaatcta 10011683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 15395589 - 15395543
Alignment:
Q  135 aaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||| ||||||| ||||| |||||||||||||| |||||||||||||    
T  15395589 aaaccaaaagtgacctattttacagggggtaaaaacctattaaccct 15395543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 25962857 - 25962791
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttttatttaaa 191  Q
    |||||||| |||||  ||| || ||||||||||||||||||||   |||||||||||||| ||||||    
T  25962857 acagggggtaaaaccgaaaatgacctatattacagggggtaaaacactattaacccttttttttaaa 25962791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 34407904 - 34407950
Alignment:
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    ||||| ||||||| | ||||||||||||||||||||||| |||||||    
T  34407904 aaaaccaaaagtgacttatattacagggggtaaataccttttaaccc 34407950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 35599368 - 35599330
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacaggggg 163  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  35599368 acagggggcaaaaccaaaagtgacctatattacaggggg 35599330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 38482350 - 38482316
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||||||||| ||||||||||||||    
T  38482350 cctatattacagggggtaaagacctattaaccctt 38482316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 9750503 - 9750446
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattac-agggggtaaatacctattaaccct 181  Q
    ||||||| |||||| ||||||| |||||||||| ||||||||||  ||||||||||||    
T  9750503 acaggggacaaaaccaaaagtgacctatattacaagggggtaaaggcctattaaccct 9750446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 10012810 - 10012863
Alignment:
Q  127 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    ||||| |||||| |||||| ||||||||||||| || |||| ||||||||||||    
T  10012810 aggggacaaaaccaaaagtaccctatattacagaggataaagacctattaaccc 10012863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 18254370 - 18254427
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||| ||||| |||| || |||||||||||||||||||||  | ||||||||||    
T  18254370 acaggggggaaaacaaaaaatgacctatattacagggggtaaatcaccattaaccctt 18254427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 22551554 - 22551521
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  22551554 cctatattacagggggtaaagacctattaaccct 22551521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 33847658 - 33847727
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||| ||||||| | |  ||||| | |||||||||||||| || |||||||||||||| |||||||    
T  33847658 agattctgatgagtcataggagtcaggagacaatcttgaagaatttttattttacaaggacgaaatctaa 33847727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 42004907 - 42004968
Alignment:
Q  47 tctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaat 108  Q
    |||| |||||||||||||| | |||||||  |||||||||||| | ||||||||||| ||||    
T  42004907 tctggtgagtcacatggcttaaggggcaaatttgaagaatctttaatttacaaggaccgaat 42004968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 889123 - 889067
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    ||||| || ||||| ||| ||| ||||||||||| |||||||| |||||||||||||    
T  889123 acaggagggaaaaccaaatgtggcctatattacaaggggtaaagacctattaaccct 889067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 12399611 - 12399643
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  12399611 cctatattacagggggtaaagacctattaaccc 12399643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 26888459 - 26888515
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||| ||||||| ||||||||| || |||||||   |||||||||||    
T  26888459 acagggggcaaaaccaaaagtgacctatattatagagggtaaaacactattaaccct 26888515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 31312796 - 31312840
Alignment:
Q  148 cctatattacagggggtaaatacctattaacccttttatttaaaa 192  Q
    ||||||||||||||||||||   |||||||||||||||| |||||    
T  31312796 cctatattacagggggtaaaacactattaacccttttatctaaaa 31312840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 35600544 - 35600600
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctttt 184  Q
    |||||||||| ||||||| ||||||||||| |||||||||  |||||||||| ||||    
T  35600544 ggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccttttt 35600600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 8e-47; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 27164567 - 27164714
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  27164567 tgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacagggg 27164666  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 179  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||    
T  27164667 gcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 27164714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 39809995 - 39810145
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  39809995 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaataatttacagggg 39810094  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  39810095 gcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 39810145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 33 - 192
Target Start/End: Complemental strand, 27163264 - 27163104
Alignment:
Q  33 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 132  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||     
T  27163264 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaatttttttacaggggc 27163165  T
Q  133 caaaactaaaagtgccctatattaca-gggggtaaatacctattaacccttttatttaaaa 192  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||||||| ||| ||||    
T  27163164 caaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctttaattaaaaa 27163104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 32 - 180
Target Start/End: Complemental strand, 39808796 - 39808649
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||            |||||||    
T  39808796 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaaatttttttttttacagggg 39808697  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  39808696 gcaaaaccaaaagtgccctatattaca-ggggtaaagacctattaaccc 39808649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 32 - 180
Target Start/End: Complemental strand, 42349109 - 42348961
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||| |||            |||||||    
T  42349109 tgccacatcatagattctgctgagtcacagggttcaggggacaatcttgaagaatcttcattttacaaggacggaatttaa-aaagaaaaattacagggg 42349011  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccc 180  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  42349010 gcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccc 42348961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 42350086 - 42350238
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  42350086 tgccacatcatagattctgctaagtcacagagctcagtgggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggg 42350185  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaacccttt 183  Q
    ||||||| |||| ||| |||||||||| ||||||||| |||||||||||||||    
T  42350186 gcaaaaccaaaaatgctctatattacaggggggtaaagacctattaacccttt 42350238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 28574684 - 28574607
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||| |||||||||||||||    
T  28574684 cacatcatagattctgctgagtcacagggttcagggggcaatcttgaagaatctttattttaaaaggacggaatctaa 28574607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 180
Target Start/End: Complemental strand, 1600223 - 1600077
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||| ||||||||||||||||  | ||| ||||||||||| |||||||||||||||||| |||||||||||||||            | |||||    
T  1600223 tgccacatcaaagattctgctgagtcaattagcttagggggcaatcgtgaagaatcttcattttataaggacggaatctaa--ttttttttttatagggg 1600126  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    ||||||| ||||||| | |||||||||||||||||| ||||||||||||    
T  1600125 gcaaaaccaaaagtggcttatattacagggggtaaagacctattaaccc 1600077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 5704440 - 5704519
Alignment:
Q  33 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  5704440 gccacatcatagatactgctgagtcacagggctcagggggtaatcttgaagaatctttattttacaaggacgaaatctaa 5704519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 1601164 - 1601242
Alignment:
Q  34 ccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||| |||||||||||||||||  |||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  1601164 ccacatcaaagattctgctgagtcactgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaa 1601242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 1601819 - 1601672
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||| |||||||||||||||||  |||| ||||||||||| ||||||||||||||||||| |||||||||| |||            | |||||    
T  1601819 tgccacatcaaagattctgctgagtcactgggcttagggggcaatcgtgaagaatcttcattttactaggacggaatttaa---tttttttttatagggg 1601723  T
Q  132 gcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccct 181  Q
    ||||||| |||||||||||||||||||| ||||||||   |||||||||||    
T  1601722 gcaaaaccaaaagtgccctatattacagaggggtaaaggtctattaaccct 1601672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 1602807 - 1602887
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||| |||||||||||||||||  || | ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  1602807 tgccacatcaaagattctgctgagtcactgggtttagggggcaatcgtgaagaatcttcattatacaaggacggaatctaa 1602887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 28561579 - 28561502
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||| |||| ||||||||| |||||| | ||||||||||||||||| | ||||||||||||| ||||||||    
T  28561579 cacatcatagactctgttgagtcacagggctcaagcggcaatcttgaagaatccttattttacaaggacagaatctaa 28561502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 28561931 - 28562008
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| ||||||||||||||||||  ||  ||| | ||||||||||||||||| ||||||||||||||||||||||    
T  28561931 cacatcaaagattctgctgagtcacagtgcataggtgacaatcttgaagaatctttattttacaaggacggaatctaa 28562008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 28567077 - 28567000
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||| |||| ||||||||| |||||| | ||||||||||||||||| | ||||||||||||| ||||||||    
T  28567077 cacatcatagactctgttgagtcacagggctcaagcggcaatcttgaagaatccttattttacaaggacagaatctaa 28567000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 28567429 - 28567506
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| ||||||||||||||||||  ||  ||| | ||||||||||||||||| ||||||||||||||||||||||    
T  28567429 cacatcaaagattctgctgagtcacagtgcataggtgacaatcttgaagaatctttattttacaaggacggaatctaa 28567506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 39513922 - 39513866
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  39513922 acagggggcaaaaccaaaagtgacctatattacagggggtaaatgcctattaaccct 39513866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 3252308 - 3252231
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| ||||||| ||||||||   |||| ||||||||||| ||||||||||| |||||| |||||||||||||||    
T  3252308 cacatcagagattctactgagtcaatgggcttagggggcaatcgtgaagaatctttattttataaggacggaatctaa 3252231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 40702012 - 40702069
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||    
T  40702012 acagggggcaaaacgaaaagtgacctatattacagggggtaaaggcctattaaccctt 40702069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 5703190 - 5703070
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 142  Q
    ||||||| ||||||||||  ||  ||||| ||||||||||||||||| |||||||||||||| |||||||            |||  ||| |||||||||    
T  5703190 agattcttctgagtcacagtgcataggggacaatcttgaagaatctttattttacaaggacgaaatctaaaaaaaaaaatttacactggggaaaactaaa 5703091  T
Q  143 agtgccctatattacaggggg 163  Q
    |||||||||||||||||||||    
T  5703090 agtgccctatattacaggggg 5703070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 28575027 - 28575170
Alignment:
Q  38 atcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaa 137  Q
    |||| ||||||||||||||||||  ||  || |||||||||||||||||||| |||||| ||||||| |||||||             ||||||| ||||    
T  28575027 atcaaagattctgctgagtcacagtgcatagtgggcaatcttgaagaatctttattttataaggacgaaatctaaaaaaaaaaatttgcaggggg-aaaa 28575125  T
Q  138 ctaaaagtgccctatattacaggg-ggtaaatacctattaaccct 181  Q
    | |||||||||||||||||||||| ||||||  ||||||||||||    
T  28575126 ccaaaagtgccctatattacagggtggtaaagtcctattaaccct 28575170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 2270293 - 2270348
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||    
T  2270293 acagggggcaaaaccaaaagtgacctataatacagggggtaaagacctattaaccc 2270348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 39913880 - 39913923
Alignment:
Q  69 ggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  39913880 ggggcaatcgtgaagaatcttcattttacaaggacggaatctaa 39913923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 31986230 - 31986287
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattaca--gggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||    
T  31986230 acagggggcaaaactaaaagtgacctatattacacggggggtaaagacctattaaccc 31986287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 34901557 - 34901503
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 179  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||    
T  34901557 acagggggcaaaaccaaaagtgacctatattacagggggtaaaagcctattaacc 34901503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 21397802 - 21397871
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||| | || | |||| |||| ||||||||||||| |||||||||||||| |||||||    
T  21397802 agattctgctgagtcataggggttagggtgcaaccttgaagaatctttattttacaaggacgaaatctaa 21397871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 21792295 - 21792364
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||| | || | |||| |||| ||||||||||||| |||||||||||||| |||||||    
T  21792295 agattctgctgagtcataggggttagggtgcaaccttgaagaatctttattttacaaggacgaaatctaa 21792364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 6105671 - 6105624
Alignment:
Q  65 tcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  6105671 tcagggggcaatcctgaagaatctttattttacaagtacggaatctaa 6105624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 31985065 - 31985010
Alignment:
Q  127 agggggcaaaactaaaagtgccctatattacaggg-ggtaaatacctattaaccct 181  Q
    |||||||||||| ||||||| |||||||||||||| |||||| |||||||||||||    
T  31985065 agggggcaaaaccaaaagtgacctatattacagggaggtaaagacctattaaccct 31985010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 12330388 - 12330332
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||| ||||||| || |  |||||||||||||||||||| |||||||||||||    
T  12330388 acagggggaaaaactagaaataacctatattacagggggtaaagacctattaaccct 12330332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 25277731 - 25277767
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctttt 184  Q
    |||||||||||||||||||| ||||||||||||||||    
T  25277731 cctatattacagggggtaaagacctattaaccctttt 25277767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 25653759 - 25653700
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 184  Q
    |||||||| ||||| |||| || ||||||||||||||||||||   ||||||||||||||    
T  25653759 acaggggggaaaaccaaaaatgacctatattacagggggtaaaacactattaaccctttt 25653700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 183
Target Start/End: Original strand, 29309799 - 29309834
Alignment:
Q  148 cctatattacagggggtaaatacctattaacccttt 183  Q
    |||||||||||||||||||| |||||||||||||||    
T  29309799 cctatattacagggggtaaaaacctattaacccttt 29309834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 7988823 - 7988785
Alignment:
Q  150 tatattacag-ggggtaaatacctattaacccttttatt 187  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  7988823 tatattacagaggggtaaatacctattaacccttttatt 7988785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 112
Target Start/End: Original strand, 9768259 - 9768293
Alignment:
Q  78 ttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||| ||||||||||||||||||||||    
T  9768259 ttgaagaatcttgattttacaaggacggaatctaa 9768293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 29309597 - 29309563
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||||||||| ||||||||||||||    
T  29309597 cctatattacagggggtaaagacctattaaccctt 29309563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 38711942 - 38712000
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    |||||||| |||||| ||| || ||||||||||||||||||||   |||||||||||||    
T  38711942 acagggggtaaaactgaaaatgacctatattacagggggtaaaacactattaacccttt 38712000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 4482075 - 4482042
Alignment:
Q  150 tatattacagggggtaaatacctattaacccttt 183  Q
    |||||||||||||||||| |||||||||||||||    
T  4482075 tatattacagggggtaaaaacctattaacccttt 4482042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 14329625 - 14329658
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  14329625 cctatattacagggggtaaagacctattaaccct 14329658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 16432748 - 16432679
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||   || | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  16432748 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 16432679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 34985347 - 34985380
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  34985347 cctatattacagggggtaaagacctattaaccct 34985380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 960522 - 960554
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  960522 cctatattacagggggtaaagacctattaaccc 960554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 4105291 - 4105342
Alignment:
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaacccttttat 186  Q
    ||||| |||| || ||||||||||||||| |||| ||||||||||||||||||    
T  4105291 aaaacaaaaaatgacctatattacagggg-taaagacctattaacccttttat 4105342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 25601972 - 25602008
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctttt 184  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  25601972 cctatattacatggggtaaagacctattaaccctttt 25602008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 27543650 - 27543682
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  27543650 cctatattacagggggtaaagacctattaaccc 27543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 27987329 - 27987293
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctttt 184  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  27987329 cctatattatagggggtaaagacctattaaccctttt 27987293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 27987552 - 27987584
Alignment:
Q  149 ctatattacagggggtaaatacctattaaccct 181  Q
    ||||||||||||||||||| |||||||||||||    
T  27987552 ctatattacagggggtaaagacctattaaccct 27987584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 28044631 - 28044595
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctttt 184  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  28044631 cctatattatagggggtaaagacctattaaccctttt 28044595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 28044854 - 28044886
Alignment:
Q  149 ctatattacagggggtaaatacctattaaccct 181  Q
    ||||||||||||||||||| |||||||||||||    
T  28044854 ctatattacagggggtaaagacctattaaccct 28044886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 28561474 - 28561430
Alignment:
Q  140 aaaagtgccctatattacagggggtaaatacctattaaccctttt 184  Q
    ||||||||||||||||||||||||||||   ||||||||| ||||    
T  28561474 aaaagtgccctatattacagggggtaaagctctattaaccttttt 28561430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 28566972 - 28566928
Alignment:
Q  140 aaaagtgccctatattacagggggtaaatacctattaaccctttt 184  Q
    ||||||||||||||||||||||||||||   ||||||||| ||||    
T  28566972 aaaagtgccctatattacagggggtaaagctctattaaccttttt 28566928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 34902739 - 34902799
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggg-gtaaatacctattaaccctttt 184  Q
    |||||||| ||||| ||||||  ||||||||||||||| |||||| ||||||||| |||||    
T  34902739 acaggggggaaaaccaaaagtaacctatattacaggggtgtaaatgcctattaactctttt 34902799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 39515124 - 39515180
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    ||||||||  |||| ||||||| |||||||||||||| |||||  ||||||||||||    
T  39515124 acagggggtcaaaccaaaagtgacctatattacagggagtaaaggcctattaaccct 39515180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 40770576 - 40770525
Alignment:
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaacccttttat 186  Q
    ||||| |||| || ||||||||||| ||| |||||||||||||||||||||||    
T  40770576 aaaaccaaaaatgacctatattacaaggg-taaatacctattaacccttttat 40770525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 43400701 - 43400669
Alignment:
Q  150 tatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||||||| ||||||||||||||    
T  43400701 tatattacagggggtaaagacctattaaccctt 43400669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 14625517 - 14625367
Alignment:
Q  33 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 132  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||            ||||||||    
T  14625517 gccacatcatagattctgctgagtcacagggctcagagggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacaggggg 14625418  T
Q  133 caaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    |||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  14625417 caaaaccaaaagtgtcctatattacagggggtaaagacctattaacccttt 14625367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 9441716 - 9441564
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  9441716 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaattttttacagggg 9441617  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaacccttt 183  Q
    ||||||| ||||||| | ||||||||| ||||||||| |||||||||||||||    
T  9441616 gcaaaaccaaaagtgtcttatattacaggggggtaaagacctattaacccttt 9441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 9442898 - 9443048
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            ||| |||    
T  9442898 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaattttttttacaaggg 9442997  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    ||||||| |||||||| |||||||||| ||||||||| |||||||||||||    
T  9442998 gcaaaaccaaaagtgctctatattacaggggggtaaagacctattaaccct 9443048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 14626687 - 14626840
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||            ||||| |    
T  14626687 tgccatatcatagattctgctgagtcacggggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacaggag 14626786  T
Q  132 gcaaaactaaaagtgccctatattacagggg-gtaaatacctattaaccctttt 184  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  14626787 gcaaaaccaaaagtgccctatattacaggggagtaaagacctattaaccctttt 14626840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 52084734 - 52084884
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||            |||||||    
T  52084734 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaattttacagggg 52084833  T
Q  132 gcaaaactaaaagtgccctatattaca--gggggtaaatacctattaaccc 180  Q
     |||||| |||||||| ||||||||||  ||||||||| ||||||||||||    
T  52084834 acaaaaccaaaagtgctctatattacagggggggtaaagacctattaaccc 52084884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 243 - 362
Target Start/End: Original strand, 6382924 - 6383045
Alignment:
Q  243 atcacttacctcctctttttcttattttgttaaaatgatcaaaatgttcaatgtcgatggtcgatgtattccggtgagtttttcccttttttg--attct 340  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | |||||| ||||||||||| |||||||||  ||||     
T  6382924 atcatttacctcctcttttccttattttgttaaaatgatcaaaacgttcaatgtcgatggtccacgtattctggtgagttttttccttttttgtaattca 6383023  T
Q  341 taactttcctcccaaataatgt 362  Q
    ||| ||||||||||||||||||    
T  6383024 taattttcctcccaaataatgt 6383045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 23322518 - 23322668
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||| ||||||||||||||||   |||| || |||||||| ||||||||||||||||||||||||||||||||||            |||||||    
T  23322518 tgccacatcaaagattctgctgagtcaatgggcttagagggcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaataattacagggg 23322617  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    ||||||| |||||||| |||||||||| ||||||||| |||||||||||||    
T  23322618 gcaaaaccaaaagtgctctatattacaggggggtaaagacctattaaccct 23322668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 13917180 - 13917260
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  13917180 tgccacatcatggattctgctgagtcacagggctcaggaggcaatcttgaagaatctttattttacaaggacggaatctaa 13917260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 32 - 178
Target Start/End: Complemental strand, 2273648 - 2273503
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||| ||||||||||||||||   |||| |||| |||||| ||||||||||||||||||||||||||||||||||            |||| ||    
T  2273648 tgccacatcaaagattctgctgagtcaatgggcttagggagcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagagg 2273549  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaac 178  Q
    || |||| |||||||||||||||||||||||||||| ||||||||||    
T  2273548 gc-aaacaaaaagtgccctatattacagggggtaaagacctattaac 2273503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 37194399 - 37194478
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  37194399 tgccacatcatagattctgctgagtcacggggctcagggg-caatcttgaagaatctttattttacaaggacggaatctaa 37194478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 13916236 - 13916159
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||| ||||||||||||  |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  13916236 cacatcatagattgtgctgagtcacagcgctcagtgggcaatcttgaagaatctttattttacaaggacggaatctaa 13916159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 43 - 181
Target Start/End: Complemental strand, 43635970 - 43635834
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 142  Q
    ||||||||||||||||   |||| ||||| ||||| |||||||||||||||||||||||||| |||||||            | |||||||||||| |||    
T  43635970 agattctgctgagtcaatgggcttaggggtcaatcgtgaagaatcttcattttacaaggacgaaatctaatttttttttt--aaagggggcaaaaccaaa 43635873  T
Q  143 agtgccctatattacagggggtaaatacctattaaccct 181  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  43635872 agtgccctatattacagggggtaaagacctattaaccct 43635834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 52083698 - 52083630
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaagg 101  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  52083698 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaa-aatcttcattttacaagg 52083630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 189
Target Start/End: Complemental strand, 23321412 - 23321254
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||| | ||||||||| ||||||   |||| | ||||||||| ||||||||||||||||||||||||||||||||||            ||| |||    
T  23321412 tgccacattaaagattctgcagagtcaatgggcttaaggggcaatcgtgaagaatcttcattttacaaggacggaatctaattttttttttttacatggg 23321313  T
Q  132 gcaaaactaaaagtgccctatattacagg-gggtaaatacctattaacccttttattta 189  Q
    ||||||| ||||||||||||||||||||| || |||| | ||||||||||| |||||||    
T  23321312 gcaaaaccaaaagtgccctatattacaggaggataaagatctattaaccctattattta 23321254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 5561017 - 5560940
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| ||||||||||||||||||  ||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  5561017 cacatcaaagattctgctgagtcacagagcatagggggcaatcttgaagaatctttattttacaaggacggaatctaa 5560940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 6077088 - 6077008
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||| ||||||||||||||||   |||| ||||||||||| |||||||||||||||||||||||||| |||||||    
T  6077088 tgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacgaaatctaa 6077008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 362
Target Start/End: Original strand, 6422239 - 6422353
Alignment:
Q  248 ttacctcctctttttcttattttgttaaaatgatcaaaatgttcaatgtcgatggtcgatgtattccggtgagtttttcccttttttgattcttaacttt 347  Q
    |||||||  ||||| | |||||||||||||| ||||||| ||||||||||||||||| | |||||| |||||| | ||||| ||| |||||||||| ||     
T  6422239 ttacctcaacttttccatattttgttaaaataatcaaaacgttcaatgtcgatggtccacgtattctggtgaggtgttcccctttgtgattcttaattta 6422338  T
Q  348 cctcccaaataatgt 362  Q
     ||||||||||||||    
T  6422339 gctcccaaataatgt 6422353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 6382830 - 6382897
Alignment:
Q  181 ttttatttaaaactcatgattgaactgttcgattc--cacagaggcagcaccgtcaaagttatcatca 246  Q
    |||||||||||||||||||||||||||||| ||||  |||||||||||||| ||||||||||||||||    
T  6382830 ttttatttaaaactcatgattgaactgttcaattccacacagaggcagcactgtcaaagttatcatca 6382897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 183
Target Start/End: Original strand, 8930267 - 8930406
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 142  Q
    |||||||||||||||| | || ||||||||||||| ||||||||||| |||||||||||||| |||||||            ||||||| |||||| |||    
T  8930267 agattctgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggacgaaatctaa-tttttttttttacaggggacaaaaccaaa 8930365  T
Q  143 agtgccctatattacagggggtaaatacctattaacccttt 183  Q
    ||| || ||||||||||||||||||   |||||||||||||    
T  8930366 agtaccttatattacagggggtaaaactctattaacccttt 8930406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 37193623 - 37193546
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| |||||||||| |||||||  ||  ||||||||||||||||||||||| |||||||||||| |||||||||    
T  37193623 cacatcaaagattctgctcagtcacagtgcatagggggcaatcttgaagaatctttattttacaaggatggaatctaa 37193546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 27547474 - 27547406
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaag 100  Q
    |||||||||| ||||||||||||||||   |||| ||||||||||| ||||||||||||||||||||||    
T  27547474 tgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaag 27547406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 243 - 362
Target Start/End: Original strand, 6373633 - 6373751
Alignment:
Q  243 atcacttacctcctctttttcttattttgttaaaatgatcaaaatgttcaatgtcgatggtcgatgtattccggtgagtttttcccttttttgattctta 342  Q
    |||| |||||||||||||| | |||||||||||||| || |||| ||||| ||||| ||||  |||||||| |||| ||| ||||||||||| ||| |||    
T  6373633 atcagttacctcctcttttccatattttgttaaaataataaaaaagttcagtgtcggtggttcatgtattctggtgtgttgttccctttttt-attttta 6373731  T
Q  343 actttcctcccaaataatgt 362  Q
    | || | |||||||||||||    
T  6373732 atttacgtcccaaataatgt 6373751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 6422140 - 6422203
Alignment:
Q  179 ccttttatttaaaactcatgattgaactgttcgattccacagaggcagcaccgtcaaagttatc 242  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| |||| ||||| ||||||    
T  6422140 ccttttatttaaaactcatgattgaattgttcaattccacagaggcggcacagtcaaggttatc 6422203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 2274571 - 2274649
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 110  Q
    |||| ||||| |||||||||||||| |   |||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  2274571 tgcctcatcaaagattctgctgagttaatgggcttaggggacaatcgtgaagaatcttcattttacaaggacggaatct 2274649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 1825349 - 1825296
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaac 178  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  1825349 acagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaac 1825296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 26097029 - 26097086
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    ||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  26097029 acaggaggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccctt 26097086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 30536504 - 30536435
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||| ||||||| | || ||||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  30536504 agattctgatgagtcatagggatcaggaggcaatcatgaagaatctttattttacaaggacggaatctaa 30536435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 51903390 - 51903459
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacg 104  Q
    ||||||| ||||||||||||||||   |||| ||||||||||| |||||||| |||||||||||||||||    
T  51903390 cacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatattcattttacaaggacg 51903459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 8928870 - 8928814
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||  ||||||||| |||||||||||||||||| |||||||||||||    
T  8928870 acagggggcaaaatcaaaagtgccttatattacagggggtaaagacctattaaccct 8928814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 26095869 - 26095813
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||| | ||||| |||||||||||||||||||| |||||||||||||    
T  26095869 acagggggcaaaaccataagtgacctatattacagggggtaaagacctattaaccct 26095813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 44311355 - 44311275
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||| ||| | |||||||||| ||| | ||| | |||||||||||||||||||||| |||||||| |||||||||||||    
T  44311355 tgccacgtcagaaattctgctgattcaaagggcacggggggcaatcttgaagaatctttattttacatggacggaatctaa 44311275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 362
Target Start/End: Original strand, 6361185 - 6361303
Alignment:
Q  243 atcacttacctcctctttttcttattttgttaaaatgatcaaaatgttcaatgtcgatggtcgatgtattccggtgagtttttcccttttttgattctta 342  Q
    |||| |||||||||||||| | |||||||||||||| || ||||  |||||||| ||  ||| | |||||| |||||||| || |||||| ||||||| |    
T  6361185 atcatttacctcctcttttccatattttgttaaaataatgaaaacattcaatgttgaacgtccacgtattctggtgagttgtt-ccttttgtgattctca 6361283  T
Q  343 actttcctcccaaataatgt 362  Q
    | || |||||||||||||||    
T  6361284 atttacctcccaaataatgt 6361303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 13902120 - 13902061
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 184  Q
    |||||||||||||| |||| |||||||||||||||| |||||| ||||||||||| ||||    
T  13902120 acagggggcaaaaccaaaactgccctatattacaggtggtaaagacctattaaccatttt 13902061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 6373552 - 6373606
Alignment:
Q  189 aaaactcatgattgaactgttcgattccacagaggcagcaccgtcaaagttatca 243  Q
    |||||||||||||||| ||||| |||||||||||||||||| |||||||| ||||    
T  6373552 aaaactcatgattgaattgttcaattccacagaggcagcactgtcaaagtcatca 6373606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 47022094 - 47022139
Alignment:
Q  148 cctatattacagggggtaaatacctattaacccttttatttaaaac 193  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||    
T  47022094 cctatattacagggggtaaagacctattaacccttttaattaaaac 47022139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 13903379 - 13903431
Alignment:
Q  131 ggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    |||||||| ||||||| |||||||||||||||||||| | |||||||||||||    
T  13903379 ggcaaaaccaaaagtgacctatattacagggggtaaagatctattaacccttt 13903431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 16785777 - 16785721
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||| ||||||| |||| |||||||||||||||  ||||||||||||    
T  16785777 acagggggcaaaaccaaaagtgacctacattacagggggtaaaggcctattaaccct 16785721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 32131909 - 32131961
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    ||||||||||  |||||| |||||||||||||||||||| |||||||||||||    
T  32131909 ggggcaaaaccgaaagtgacctatattacagggggtaaagacctattaaccct 32131961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 50961389 - 50961345
Alignment:
Q  147 ccctatattacagggggtaaatacctattaacccttttatttaaa 191  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||    
T  50961389 ccctaaattacagggggtaaatacatattaacccttttatttaaa 50961345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 6361038 - 6361088
Alignment:
Q  179 ccttttatttaaaactcatgattgaactgttcgattc--cacagaggcagc 227  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  6361038 ccttttatttaaaactcatgattgaactgttcaattcctcacagaggcagc 6361088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 6368640 - 6368698
Alignment:
Q  187 ttaaaactcatgattgaactgttcgattcc--acagaggcagcaccgtcaaagttatca 243  Q
    |||||||||||||||||| ||||| |||||  ||||||||||||| |||||||||||||    
T  6368640 ttaaaactcatgattgaattgttcaattccgcacagaggcagcactgtcaaagttatca 6368698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 51470184 - 51470129
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||| ||||||||| ||||||| | |||||||||||||||||| ||||||||||||    
T  51470184 acagagggcaaaaccaaaagtgacttatattacagggggtaaagacctattaaccc 51470129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 6400329 - 6400371
Alignment:
Q  183 ttatttaaaactcatgattgaactgttcgattccacagaggca 225  Q
    |||||||||||||||||||||||||||| ||||| ||||||||    
T  6400329 ttatttaaaactcatgattgaactgttcaattcctcagaggca 6400371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 25235829 - 25235771
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    |||||||| |||| | ||| || |||||||||||||||||||| |||||||||||||||    
T  25235829 acagggggaaaaaatgaaattgacctatattacagggggtaaagacctattaacccttt 25235771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 6368759 - 6368856
Alignment:
Q  265 tattttgttaaaatgatcaaaatgttcaatgtcgatggtcgatgtattccggtgagtttttcccttttttgattcttaactttcctcccaaataatgt 362  Q
    |||||||||||||| ||||||| |||  |||||  ||||  |||| ||  |||||||| ||||||||| |||||||||| ||  ||||||||||||||    
T  6368759 tattttgttaaaataatcaaaacgtttcatgtcagtggttcatgtgttatggtgagttcttcccttttgtgattcttaatttatctcccaaataatgt 6368856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 14978715 - 14978768
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||| ||||||| ||||||| ||||||||||||  |||||||||||||    
T  14978715 ggggcaaaaccaaaagtgtcctatataacagggggtaaaggcctattaaccctt 14978768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 33667634 - 33667691
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggg-gtaaatacctattaaccct 181  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||  ||||||||||||    
T  33667634 acagggggcaaaaccaaaagtgacctatattacaggggtgtaaaggcctattaaccct 33667691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 40247382 - 40247435
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaa 177  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||    
T  40247382 acaggggggaaaaccaaaagtgccctatattacatgggggtaaagacctattaa 40247435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 6350200 - 6350248
Alignment:
Q  179 ccttttatttaaaactcatgattgaactgttcgattccacagaggcagc 227  Q
    ||||||||||  |||||||||||||||||||| ||||| ||||||||||    
T  6350200 ccttttatttttaactcatgattgaactgttcaattcctcagaggcagc 6350248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 6391938 - 6391978
Alignment:
Q  179 ccttttatttaaaactcatgattgaactgttcgattccaca 219  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  6391938 ccttatatttaaaactcatgattgaactgttcaattccaca 6391978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 24545511 - 24545455
Alignment:
Q  126 cagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||| |||||||| ||||||| ||||||||| ||||||||||  |||||||||||||    
T  24545511 caggaggcaaaaccaaaagtgacctatattatagggggtaaaagcctattaaccctt 24545455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 38741612 - 38741488
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 142  Q
    ||||| |||||||||| | || | ||||||||||  ||||||||||| |||||||||||| | |||||||            |||||||||||||| |||    
T  38741612 agattttgctgagtcataggggttagggggcaattctgaagaatctttattttacaaggatgaaatctaaaaaaaatattttacagggggcaaaaccaaa 38741513  T
Q  143 agtgccctatattacagggggtaaa 167  Q
    |||| | ||||||||||||| ||||    
T  38741512 agtgtcttatattacaggggttaaa 38741488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 167
Target Start/End: Complemental strand, 4487594 - 4487551
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattac-agggggtaaa 167  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
T  4487594 acagggggcaaaactaaaagtgctctatattacaagggggtaaa 4487551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 35979590 - 35979645
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 184  Q
    |||||||||  ||||||| | |||||||||||||| ||| ||||||||||||||||    
T  35979590 ggggcaaaatcaaaagtgacttatattacagggggaaaagacctattaaccctttt 35979645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 37269602 - 37269649
Alignment:
Q  65 tcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||| ||||||||||| ||| |||||||||| |||||||    
T  37269602 tcagggggcaatcctgaagaatctttattgtacaaggacgaaatctaa 37269649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 47146370 - 47146425
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattac-agggggtaaatacctattaacc 179  Q
    |||||| ||||||| ||||||| |||||||||| |||||||||| |||||||||||    
T  47146370 acagggagcaaaaccaaaagtgacctatattacaagggggtaaagacctattaacc 47146425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 49201387 - 49201442
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||||||| ||||| ||||||| |||||||| |||||||||||  |||||||||||    
T  49201387 acaggggggaaaaccaaaagtgacctatattgcagggggtaaaagcctattaaccc 49201442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 52083631 - 52083580
Alignment:
Q  130 gggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccc 180  Q
    ||||||||| |||| ||||||||||||||| |||||||| ||||||||||||    
T  52083631 gggcaaaaccaaaaatgccctatattacaggggggtaaagacctattaaccc 52083580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 2059451 - 2059489
Alignment:
Q  148 cctatattacagggggtaaatacctattaacccttttat 186  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  2059451 cctatattacagggggtaaagacctattaatccttttat 2059489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 2472609 - 2472651
Alignment:
Q  148 cctatattacagggggtaaatacctattaacccttttatttaa 190  Q
    |||||||||||||||||||| ||||||||||| |||| |||||    
T  2472609 cctatattacagggggtaaagacctattaaccattttttttaa 2472651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 5561649 - 5561722
Alignment:
Q  38 atcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||||||| | || |||| | || ||||||||||||||| |||||| |||  ||||||||||    
T  5561649 atcatagattctgctgagtcata-ggttcagagagcgatcttgaagaatctttattttataagagcggaatctaa 5561722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 167
Target Start/End: Original strand, 8985817 - 8985851
Alignment:
Q  133 caaaactaaaagtgccctatattacagggggtaaa 167  Q
    |||||||||||||| ||||||||||||||||||||    
T  8985817 caaaactaaaagtgtcctatattacagggggtaaa 8985851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 13545609 - 13545575
Alignment:
Q  150 tatattacagggggtaaatacctattaaccctttt 184  Q
    |||||||||||||||||| ||||||||||||||||    
T  13545609 tatattacagggggtaaagacctattaaccctttt 13545575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 18458827 - 18458861
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||||||||| ||||||||||||||    
T  18458827 cctatattacagggggtaaagacctattaaccctt 18458861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 33934693 - 33934635
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggg-gtaaatacctattaaccctt 182  Q
    |||||||||||||| |||||||  |||||||||||||| |||||  |||||||||||||    
T  33934693 acagggggcaaaaccaaaagtgatctatattacaggggcgtaaaaccctattaaccctt 33934635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 38742387 - 38742441
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    |||||||||  |||||| |||||||||||||||||||||   |||||||||||||    
T  38742387 ggggcaaaatcaaaagtaccctatattacagggggtaaagctctattaacccttt 38742441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 1826436 - 1826493
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    |||||||||||||  ||||||| ||||||||||| ||||||||| || ||||||||||    
T  1826436 acagggggcaaaatcaaaagtgacctatattacaggggggtaaaaacatattaaccct 1826493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 112
Target Start/End: Complemental strand, 8928917 - 8928884
Alignment:
Q  79 tgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||||||||| |||||||||||    
T  8928917 tgaagaatcttcattttacaagaacggaatctaa 8928884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 9439427 - 9439460
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  9439427 cctatattacagggggtaaagacctattaaccct 9439460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 24987640 - 24987607
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  24987640 cctatattacagggggtaaagacctattaaccct 24987607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 25600986 - 25600929
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccct 181  Q
    |||||||| ||||| ||||||| |||||||| ||| |||||||| |||||||||||||    
T  25600986 acaggggggaaaaccaaaagtgacctatattgcagaggggtaaagacctattaaccct 25600929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 25601922 - 25601975
Alignment:
Q  127 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||||| ||||| ||||||| |||||||| |||||||||||  |||||||||||    
T  25601922 aggggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaaccc 25601975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 30434326 - 30434277
Alignment:
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    ||||| |||| || |||||||||||||||||||| ||| |||||||||||    
T  30434326 aaaacaaaaaatgacctatattacagggggtaaagaccgattaacccttt 30434277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 33936095 - 33936136
Alignment:
Q  141 aaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||| ||||||||||||||||||||  |||||||||||||    
T  33936095 aaagtgacctatattacagggggtaaaatcctattaaccctt 33936136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 36343210 - 36343153
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagg-gggtaaatacctattaaccct 181  Q
    |||||||| ||||| |||| || ||||||||||||| ||||||| |||||||||||||    
T  36343210 acaggggggaaaacaaaaaatgacctatattacaggagggtaaagacctattaaccct 36343153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 37268960 - 37268891
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||| |||||| | || | ||||||||||| |||||||| || |||||| ||| |||||||||||    
T  37268960 agattctgcagagtcataggggtgagggggcaatcctgaagaatttttattttataagaacggaatctaa 37268891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 44311248 - 44311207
Alignment:
Q  140 aaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  44311248 aaaagtgtcctatattacagggggtaaaggcctattaaccct 44311207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 4487677 - 4487617
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggac 103  Q
    ||||| |||||||||| | || | | ||||||||| ||||||||||| |||||||||||||    
T  4487677 agattttgctgagtcatagggattatggggcaatcctgaagaatctttattttacaaggac 4487617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 10028002 - 10028034
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  10028002 cctatattacagggggtaaagacctattaaccc 10028034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 15336426 - 15336378
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaa 177  Q
    |||| ||||| |||| || |||||||||||||||||||| |||||||||    
T  15336426 ggggaaaaaccaaaaatgacctatattacagggggtaaagacctattaa 15336378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 40246317 - 40246277
Alignment:
Q  140 aaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    ||||||||  ||||||||||||||||||| |||||||||||    
T  40246317 aaaagtgcgttatattacagggggtaaatgcctattaaccc 40246277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 44200382 - 44200326
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||| | ||||| |||| || ||||||||||| |||||||| |||||||||||||    
T  44200382 acagggtggaaaaccaaaaatggcctatattacaaggggtaaagacctattaaccct 44200326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 47221949 - 47221997
Alignment:
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    ||||| ||||||| |||||||| |||| |||||| ||||||||||||||    
T  47221949 aaaaccaaaagtgacctatattgcaggaggtaaagacctattaaccctt 47221997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 48643364 - 48643400
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctttt 184  Q
    |||| |||||||||||||||||| |||||||||||||    
T  48643364 cctaaattacagggggtaaatacatattaaccctttt 48643400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 50105413 - 50105457
Alignment:
Q  140 aaaagtgccctatattacagg-gggtaaatacctattaacccttt 183  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||    
T  50105413 aaaagtgacctatattacaggagggtaaagacctattaacccttt 50105457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 32 - 182
Target Start/End: Original strand, 24235539 - 24235690
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||            |||||||    
T  24235539 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaaaaataaatttttacagggg 24235638  T
Q  132 gcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccctt 182  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  24235639 gcaaaaccaaaagtgccctatattacagaggggtaaagacctattaaccctt 24235690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 35 - 182
Target Start/End: Complemental strand, 24234475 - 24234327
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 134  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||    
T  24234475 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttttttttttacagggggca 24234376  T
Q  135 aaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 182  Q
    |||| ||||||| ||||||||||| ||||||||| ||||||||||||||    
T  24234375 aaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctt 24234327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 32 - 180
Target Start/End: Complemental strand, 22056631 - 22056482
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  22056631 tgccacatcatagattctgctgagtcacagagctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggg 22056532  T
Q  132 gcaaaactaaaagtgccctatattacaggg-ggtaaatacctattaaccc 180  Q
    ||||||| |||||||||||||||||||||| | |||| ||||||||||||    
T  22056531 gcaaaaccaaaagtgccctatattacagggagttaaagacctattaaccc 22056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 22058187 - 22058336
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  22058187 tgccacatcatagattctgctgagtcatagggctcaaggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaagaatttacagggg 22058286  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccc 180  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  22058287 gcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccc 22058336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 24914587 - 24914456
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  24914587 tgccacatcatagattctgctgagtcacaggacttagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaattacagggg 24914488  T
Q  132 gcaaaactaaaagtgccctatattacaggggg 163  Q
    ||||||  ||||||| ||||||||||||||||    
T  24914487 gcaaaatcaaaagtgtcctatattacaggggg 24914456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 56021 - 56170
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||| ||||||||||||||||   |||| ||||||||||| ||||||||||||||||||||| ||||||||||||            |||||||    
T  56021 tgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaacgacggaatctaaaaaaaaaaaattacagggg 56120  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
     |||||  |||||||||||||||||||||||||||| |||||||||||||    
T  56121 acaaaatcaaaagtgccctatattacagggggtaaagacctattaaccct 56170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 32 - 182
Target Start/End: Original strand, 12322712 - 12322862
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||| ||||||||||||||||   |||| ||||||||||| ||||||||||||||||||||||||||||||||||            |||||||    
T  12322712 tgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaa-aaaaaaaaattacagggg 12322810  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 182  Q
    ||||||  ||||||||||||||||||| ||||||||| ||||||||||||||    
T  12322811 gcaaaatcaaaagtgccctatattacaggggggtaaagacctattaaccctt 12322862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 180
Target Start/End: Complemental strand, 54952 - 54807
Alignment:
Q  34 ccacatcatagattctgctgagtcacatg-gctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 132  Q
    |||||||| |||||||||||||||| ||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||            |||||||     
T  54952 ccacatcaaagattctgctgagtca-atgagcttagggggcaatcgtgaataatcttcattttacaaggacggaatctaattttttttttttacagggga 54854  T
Q  133 caaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||||| ||||||| ||||||||||||| || ||| ||||||||||||    
T  54853 caaaaccaaaagtgtcctatattacaggagg-aaagacctattaaccc 54807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 182
Target Start/End: Complemental strand, 12321711 - 12321560
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||| |||||||||| |||||   |||| | ||||||||| |||||||||||||||||||||||||| ||||||             ||||| |    
T  12321711 tgccacatcaaagattctgctaagtcaataggcttaaggggcaatcgtgaagaatcttcattttacaaggacgaaatctataaaaaaaaaattacaggag 12321612  T
Q  132 gcaaaactaaaagtgccctatattacaggggg-taaatacctattaaccctt 182  Q
    ||||||| |||||| ||||||||||||||||| |||| ||||||||||||||    
T  12321611 gcaaaaccaaaagtaccctatattacagggggataaagacctattaaccctt 12321560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 43 - 181
Target Start/End: Complemental strand, 34762319 - 34762181
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 142  Q
    ||||||||||||||||   |||| ||||||||||  |||||||||||||||||||||||||| ||||||             |||||| ||||||| |||    
T  34762319 agattctgctgagtcaatgggcttagggggcaattgtgaagaatcttcattttacaaggacgaaatctataaaaaaaaatttacagggagcaaaaccaaa 34762220  T
Q  143 agtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||| |||||| |||||||| ||||    
T  34762219 agtgccctatattacaggaggtaaagacctattagccct 34762181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 5999858 - 5999793
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttac 97  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||| |||||||    
T  5999858 tgccacatcatagattctgctgagtcacagagctcagggggcaatcctgaagaatctttattttac 5999793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 6000582 - 6000657
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 110  Q
    ||||||| |||||||||||||||||| |||  ||||||||||| ||||||||||| |||||||||||| |||||||    
T  6000582 cacatcaaagattctgctgagtcacagggcatagggggcaatcctgaagaatctttattttacaaggatggaatct 6000657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 14328648 - 14328703
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  14328648 acagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 14328703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 14421658 - 14421713
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  14421658 acagggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 14421713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 3063489 - 3063542
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  3063489 ggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccctt 3063542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 43 - 180
Target Start/End: Complemental strand, 33483833 - 33483696
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 142  Q
    ||||||||||||||||   |||| ||| ||||||  |||| |||||||||||||||||||||||||| ||            |||| ||||||||| |||    
T  33483833 agattctgctgagtcaatgggcttaggtggcaattgtgaataatcttcattttacaaggacggaatc-aaatttttttttttacagagggcaaaaccaaa 33483735  T
Q  143 agtgccctatattacaggg-ggtaaatacctattaaccc 180  Q
    |||| |||||||||||||| |||||| ||||||||||||    
T  33483734 agtgtcctatattacagggtggtaaagacctattaaccc 33483696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 33485017 - 33485115
Alignment:
Q  65 tcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccctatattacaggggg 163  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| | |            |||||||||||||| |||||| |||||||||||||||||    
T  33485017 tcagggggcaatcctgaagaatctttattttacaaggacggaattttaaaaaaaaaatttacagggggcaaaaccaaaagtaccctatattacaggggg 33485115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 11425712 - 11425829
Alignment:
Q  67 agggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccctatattacagggggtaa 166  Q
    |||||| |||||||| ||||||| ||||||||| |||||||| |||            ||||| || ||||||||||||||||||||||||||||| |||    
T  11425712 agggggtaatcttgatgaatctttattttacaaagacggaatttaaaaaaaatattttacaggagggaaaactaaaagtgccctatattacaggggataa 11425811  T
Q  167 atacctattaaccctttt 184  Q
    |   ||||||||||||||    
T  11425812 aacactattaaccctttt 11425829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 14327424 - 14327370
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 179  Q
    |||||||||||||| ||||||| | ||||||||||||||||||  ||||||||||    
T  14327424 acagggggcaaaaccaaaagtgacgtatattacagggggtaaaggcctattaacc 14327370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 14420434 - 14420380
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 179  Q
    |||||||||||||| ||||||| | ||||||||||||||||||  ||||||||||    
T  14420434 acagggggcaaaaccaaaagtgacgtatattacagggggtaaaggcctattaacc 14420380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 31851813 - 31851752
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttttat 186  Q
    |||||||| |||||  ||| || ||||||||||||||| |||| ||||||||||||||||||    
T  31851813 acaggggggaaaaccgaaaatgacctatattacaggggataaagacctattaacccttttat 31851752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 3370131 - 3370211
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||| ||||||| |||| ||| |||||||||||||||||  | |||||| || ||||||| | || |||||||||    
T  3370131 tgccacatcacagattctactgactcaaatggctcagggggcaattctaaagaattttgattttacgatgatggaatctaa 3370211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 16129539 - 16129485
Alignment:
Q  135 aaactaaaagtgccctatattacagggggtaaatacctattaacccttttattta 189  Q
    |||| ||||||| | |||||||||||||||||| || ||||||||||||| ||||    
T  16129539 aaaccaaaagtgacatatattacagggggtaaagacttattaaccctttttttta 16129485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 22366235 - 22366277
Alignment:
Q  140 aaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||    
T  22366235 aaaagtgacctatattgcagggggtaaagacctattaaccctt 22366277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 29942468 - 29942502
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||||||||| ||||||||||||||    
T  29942468 cctatattacagggggtaaagacctattaaccctt 29942502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 112
Target Start/End: Complemental strand, 6759106 - 6759073
Alignment:
Q  79 tgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||| ||||||||||||||||||||||    
T  6759106 tgaagaatctttattttacaaggacggaatctaa 6759073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 22574056 - 22574089
Alignment:
Q  149 ctatattacagggggtaaatacctattaaccctt 182  Q
    ||||||||||||||||||| ||||||||||||||    
T  22574056 ctatattacagggggtaaagacctattaaccctt 22574089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 6000674 - 6000729
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||| ||||| |||||||| |||||||||||||||||||   |||||||||||    
T  6000674 acaggggg-aaaaccaaaagtgctctatattacagggggtaaagctctattaaccct 6000729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 10344082 - 10344050
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  10344082 cctatattacagggggtaaagacctattaaccc 10344050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 13114430 - 13114398
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  13114430 cctatattacagggggtaaagacctattaaccc 13114398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 22573853 - 22573801
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||| ||||| |||| || ||||||||| |||||||||| |||||||||||||    
T  22573853 ggggaaaaacaaaaaatgacctatattatagggggtaaagacctattaaccct 22573801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 23270226 - 23270266
Alignment:
Q  140 aaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    ||||||| ||||||||| |||||||||| ||||||||||||    
T  23270226 aaaagtgacctatattaaagggggtaaagacctattaaccc 23270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 24387786 - 24387818
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  24387786 cctatattacagggggtaaagacctattaaccc 24387818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 30409671 - 30409727
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||| ||||| ||||||| |||||||| |||| ||||||  ||||||||||||    
T  30409671 acaggggggaaaaccaaaagtgacctatattgcaggaggtaaaggcctattaaccct 30409727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 7e-44; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 17763485 - 17763335
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  17763485 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacagggg 17763386  T
Q  132 gcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccct 181  Q
    ||||||| ||||||| |||||||||||| |||||||| |||||||||||||    
T  17763385 gcaaaaccaaaagtgtcctatattacagaggggtaaagacctattaaccct 17763335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 17764608 - 17764757
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  17764608 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaattttttttacagggg 17764707  T
Q  132 gcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccc 180  Q
    ||||||| |||||||||||||||||||| || ||||| ||||||||||||    
T  17764708 gcaaaaccaaaagtgccctatattacagtggagtaaagacctattaaccc 17764757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 35 - 184
Target Start/End: Complemental strand, 34158203 - 34158054
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 134  Q
    |||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||             |||||||||    
T  34158203 cacatcatagattctgctgagtcacagggatctgggggcaatcttgaagaatcttcattttacaaggacggaatctaa-tttttttttttncagggggca 34158105  T
Q  135 aaactaaaagtgccctatattaca-gggggtaaatacctattaaccctttt 184  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  34158104 aaaccaaaagtgccctatattacaggggggtaaagacctattaaccctttt 34158054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 48170170 - 48170250
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48170170 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 48170250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 35 - 189
Target Start/End: Original strand, 1831892 - 1832045
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 134  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||  ||||||||            |||||||| |    
T  1831892 cacatcatagattctgctgagtcacagggcttagggggcaatcttgaagaatctttattttacaaggatagaatctaaaaaaaaaaatttacaggggg-a 1831990  T
Q  135 aaactaaaagtgccctatattacagggggtaaatacctattaacccttttattta 189  Q
    |||  ||||||||||||||||||||||||||||  |||||||||||||| |||||    
T  1831991 aaatcaaaagtgccctatattacagggggtaaagccctattaaccctttaattta 1832045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 9554168 - 9554321
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||||||||| ||||||||||   |||| ||||||||||| ||||||||||||||||||||||||||||||||||            |||||||    
T  9554168 tgccacatcatagattatgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaattttttttttttacagggg 9554267  T
Q  132 gcaaaactaaaagtgccctatattacagg-gggtaaatacctattaaccctttt 184  Q
    ||||||| ||||||||||||||||||||| ||||||| |  |||||||||||||    
T  9554268 gcaaaaccaaaagtgccctatattacaggagggtaaagatttattaaccctttt 9554321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 35 - 182
Target Start/End: Complemental strand, 9553546 - 9553398
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnn-acagggggc 133  Q
    ||||||| ||||| |||||||| |   |||| ||||||||||| ||||||||||||||||||||||||||||||||||             ||||| |||    
T  9553546 cacatcaaagattatgctgagttattgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaataatttacaggaggc 9553447  T
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  9553446 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 9553398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 1830960 - 1830811
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||||||| ||||||||||||            ||| |||    
T  1830960 tgccacaccatagattctgctaagtcacagggctcagggagcaatcttgaagaatctttattttacaaagacggaatctaaaaaaaaaaatttacaaggg 1830861  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    | ||||  ||||||  ||||||||||||||||||||  ||||||||||||    
T  1830860 ggaaaatcaaaagtatcctatattacagggggtaaagccctattaaccct 1830811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 11056881 - 11056803
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 110  Q
    |||||| ||| ||||||||||||||||   |||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  11056881 tgccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 11056803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 24436305 - 24436374
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||| |||| ||||||||||||| ||| ||||||| ||||||||||||||||||||||    
T  24436305 agattctgctgagtcatatgggtcagggggcaatcctgaggaatctttattttacaaggacggaatctaa 24436374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 25776414 - 25776494
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||| ||||||||||||||||   |||| ||||||||||  |||||||| |||||||||||||||||||||||||    
T  25776414 tgccacatcaaagattctgctgagtcaatgggcttagggggcaattgtgaagaattttcattttacaaggacggaatctaa 25776494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 48168971 - 48168915
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttca 91  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  48168971 cacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatgttca 48168915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 13772551 - 13772629
Alignment:
Q  35 cacatcatagattctgctga-gtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||| ||||||||||| ||||||  |||||||||| |||||||||||||||| |||||||||||| |||||||||    
T  13772551 cacatcattgattctgctgaagtcacagagctcagggggtaatcttgaagaatctttattttacaaggatggaatctaa 13772629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 48168905 - 48168847
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    |||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||    
T  48168905 acagggggcaaaaccaaaagtgccctatattacagagggtaaagacctattaacccttt 48168847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 1594127 - 1594184
Alignment:
Q  126 cagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    |||| |||||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  1594127 caggaggcaaaaccaaaagtgacctatattacagggggtaaagacctattaacccttt 1594184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 35891144 - 35891075
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||| | || ||||||||||||| ||||||||||| ||||||||| |||| |||||||    
T  35891144 agattctgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaagacgaaatctaa 35891075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 21237349 - 21237404
Alignment:
Q  127 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||||    
T  21237349 agggggcaaaaccaaaagtgacctatattatagggggtaaatgcctattaaccctt 21237404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 42509040 - 42509097
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||| |||||||||||||||||||| |||||||   ||||||||||||    
T  42509040 acagggggcaaaaccaaaagtgccctatattacagagggtaaaacactattaaccctt 42509097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 47638737 - 47638806
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||| || ||||||| |||| ||||| ||||||| ||||||||||| |||||||||| |||||||||||    
T  47638737 agattttgttgagtcatatggatcaggaggcaatcctgaagaatctttattttacaagtacggaatctaa 47638806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 11056781 - 11056725
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccctttt 184  Q
    |||||||||| ||||||||| |||||||||| |||||||| ||||||||||||||||    
T  11056781 ggggcaaaaccaaaagtgccttatattacaggggggtaaagacctattaaccctttt 11056725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 33767298 - 33767378
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||| ||||| ||||| ||||||||||   |||| ||||| ||||| ||||||||||| ||||||||| ||||||||||||    
T  33767298 tgccgcatcaaagattgtgctgagtcaatgggcttaggggacaatcgtgaagaatcttaattttacaaagacggaatctaa 33767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 8175003 - 8174888
Alignment:
Q  62 ggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa-nnnnnnnnnnnnacagggggcaaaactaaaagtgccctatattacagg 160  Q
    |||| ||||| ||||| ||||||||||||||||||||| ||||||||||||             |||||  ||||||| |||| ||||||||||||||||    
T  8175003 ggcttaggggacaatcgtgaagaatcttcattttacaaagacggaatctaatttttttttttttacaggatgcaaaaccaaaaatgccctatattacagg 8174904  T
Q  161 gggtaaatacctatta 176  Q
    ||||||| ||||||||    
T  8174903 gggtaaagacctatta 8174888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 47637853 - 47637794
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaagga 102  Q
    |||||||| ||||||| | || ||||||||||||| ||||||||||| ||||||||||||    
T  47637853 agattctgatgagtcataggggtcagggggcaatcatgaagaatctttattttacaagga 47637794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 48945235 - 48945181
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    |||||||||| |||| || |||||||||||| ||||||| |||||||||||||||    
T  48945235 ggggcaaaaccaaaaatgacctatattacagagggtaaaaacctattaacccttt 48945181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 6269574 - 6269525
Alignment:
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    |||||| ||| || |||||||||||||||||||| |||||||||||||||    
T  6269574 aaaactgaaaatgacctatattacagggggtaaagacctattaacccttt 6269525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 13771706 - 13771629
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| |||||||||||||||| |  ||  | ||||||||||||||||||||| |||||| ||| ||| |||||||    
T  13771706 cacatcaaagattctgctgagtcatagtgcatatggggcaatcttgaagaatctttattttataagaacgaaatctaa 13771629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 24434963 - 24434906
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccct 181  Q
    |||| ||||||||| |||||||||| ||||||||| |||||||| |||||||||||||    
T  24434963 acagagggcaaaacgaaaagtgcccgatattacaggggggtaaagacctattaaccct 24434906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 33757463 - 33757402
Alignment:
Q  127 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttttattt 188  Q
    |||||| ||||  ||||||| |||||||||||||||||||| | ||||||||||||| ||||    
T  33757463 aggggggaaaatcaaaagtgacctatattacagggggtaaagatctattaaccctttaattt 33757402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 5219038 - 5219098
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctttt 184  Q
    |||||||||||||  ||||||| ||||||||||| |||||||||  |||||||||||||||    
T  5219038 acagggggcaaaatcaaaagtgacctatattacaggggggtaaaggcctattaaccctttt 5219098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 14554450 - 14554506
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||| ||||| |||| || ||||||||||||||||||||  ||||||||||||    
T  14554450 acaggggggaaaacaaaaaatgacctatattacagggggtaaaggcctattaaccct 14554506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 19272460 - 19272508
Alignment:
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    ||||| |||| || |||||||||||||||||||| ||||||||||||||    
T  19272460 aaaaccaaaaatgacctatattacagggggtaaagacctattaaccctt 19272508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 48896527 - 48896475
Alignment:
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 184  Q
    ||||||| ||||||| ||||||||||||| |||||| |||||||||| |||||    
T  48896527 gcaaaaccaaaagtgacctatattacaggaggtaaagacctattaactctttt 48896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 13279419 - 13279474
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||||||| |||||  ||| || |||||||||||||||||||| ||||||||||||    
T  13279419 acagggggaaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 13279474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 112
Target Start/End: Complemental strand, 24435011 - 24434980
Alignment:
Q  81 aagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||||||||||||||||||    
T  24435011 aagaatcttcattttacaaggacggaatctaa 24434980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 1589441 - 1589403
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacaggggg 163  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  1589441 acagggggcaaaaccaaaagtgacctatattacaggggg 1589403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 9915683 - 9915649
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||||||||| ||||||||||||||    
T  9915683 cctatattacagggggtaaagacctattaaccctt 9915649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 9923595 - 9923561
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||||||||| ||||||||||||||    
T  9923595 cctatattacagggggtaaagacctattaaccctt 9923561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 23784616 - 23784582
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||||||||| ||||||||||||||    
T  23784616 cctatattacagggggtaaagacctattaaccctt 23784582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 9113388 - 9113343
Alignment:
Q  67 agggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||| ||||||||||||||||||||||| |||||  |||||||||    
T  9113388 aggggccaatcttgaagaatcttcatttttcaagggtggaatctaa 9113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 11058092 - 11058161
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||| | |  | ||||||||||| |||||||| || |||||||||| || ||||||||    
T  11058092 agattctgctgagtcataagtgtgagggggcaatcatgaagaatttttattttacaagaacagaatctaa 11058161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 24555926 - 24555959
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  24555926 cctatattacagggggtaaaaacctattaaccct 24555959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 37413832 - 37413787
Alignment:
Q  67 agggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||| ||||| ||||||||||||||||| |||||| |||||||||    
T  37413832 aggggtcaatcctgaagaatcttcatttttcaaggatggaatctaa 37413787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 46459121 - 46459064
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaag 100  Q
    |||||||| |||||||||||| | ||||| |||  |||||||||||| ||||||||||    
T  46459121 agattctggtgagtcacatggtttaggggacaaatttgaagaatctttattttacaag 46459064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 13882635 - 13882599
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctttt 184  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  13882635 cctatattacagagggtaaagacctattaaccctttt 13882599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 23371481 - 23371449
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  23371481 cctatattacagggggtaaagacctattaaccc 23371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 24757995 - 24758051
Alignment:
Q  127 agggggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 182  Q
    |||||||||||| || ||||  |||||||||| ||||||||| ||||||||||||||    
T  24757995 agggggcaaaaccaatagtgatctatattacaggggggtaaagacctattaaccctt 24758051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 26050428 - 26050464
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctttt 184  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  26050428 cctatattacaggggttaaagacctattaaccctttt 26050464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 26059787 - 26059823
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctttt 184  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  26059787 cctatattacaggggttaaagacctattaaccctttt 26059823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 35913310 - 35913342
Alignment:
Q  149 ctatattacagggggtaaatacctattaaccct 181  Q
    ||||||||||||||||||| |||||||||||||    
T  35913310 ctatattacagggggtaaagacctattaaccct 35913342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 38193219 - 38193251
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  38193219 cctatattacagggggtaaagacctattaaccc 38193251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 39580191 - 39580223
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  39580191 cctatattacagggggtaaagacctattaaccc 39580223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 42202201 - 42202161
Alignment:
Q  140 aaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    ||||||| |||||||| ||||||||||| ||||||||||||    
T  42202201 aaaagtgacctatattgcagggggtaaagacctattaaccc 42202161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 7e-44; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 20962341 - 20962191
Alignment:
Q  33 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 132  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||            ||||||||    
T  20962341 gccacatcatagattctgctgagtcacagggctcaggaggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaatttttacaggggg 20962242  T
Q  133 caaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    |||||| ||||||||| |||||||||||||||||| | |||||||||||||    
T  20962241 caaaaccaaaagtgccatatattacagggggtaaagatctattaacccttt 20962191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 32 - 182
Target Start/End: Complemental strand, 29248390 - 29248240
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            |||| ||    
T  29248390 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaataaatttacagcgg 29248291  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    | ||||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  29248290 gtaaaaccaaaagtgtcctatattacagggggtaaagacctattaaccctt 29248240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 34740036 - 34739887
Alignment:
Q  33 gccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacaggggg 132  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||     
T  34740036 gccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaatttttttacaggggc 34739937  T
Q  133 caaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  34739936 caaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 34739887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 32 - 177
Target Start/End: Original strand, 34741302 - 34741448
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  34741302 tgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacagggg 34741401  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaa 177  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  34741402 gcaaaaccaaaagtgccctatattacaggggggtaaagacctattaa 34741448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 32 - 180
Target Start/End: Original strand, 20963608 - 20963757
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||            |||||||    
T  20963608 tgccacatcatagattctgctgagtcacagggctcaggggacaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggg 20963707  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccc 180  Q
    ||||| | ||||||||||||||||||| ||||||||| ||||||||||||    
T  20963708 gcaaagccaaaagtgccctatattacaggggggtaaagacctattaaccc 20963757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 32 - 182
Target Start/End: Original strand, 29249618 - 29249769
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||            |||||||    
T  29249618 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttacaaggacgaaatctaaaaaaaaaaatttacagggg 29249717  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccctt 182  Q
    ||||||| |||||| |||||||||||| ||||||||| ||||||||||||||    
T  29249718 gcaaaaccaaaagttccctatattacaggggggtaaagacctattaaccctt 29249769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 12566850 - 12566996
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggca 134  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||            ||||||||||    
T  12566850 cacatcatagattcagctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaagaaacaaattttacagggggca 12566949  T
Q  135 aaactaaaagtgccctatattac-agggggtaaatacctattaaccc 180  Q
    |||| |||||||||||||||||| |||||||||| ||||||||||||    
T  12566950 aaaccaaaagtgccctatattacaagggggtaaagacctattaaccc 12566996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 50881332 - 50881482
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||| ||||||||||||||||   |||| | ||||||||| ||||||||||||||||||||| ||||||||||||            |||||||    
T  50881332 tgccacatcaaagattctgctgagtcaatgggcttaaggggcaatcgtgaagaatcttcattttacaatgacggaatctaa-tttttttttttacagggg 50881430  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  50881431 gcaaaaccaaaagtggcctatattacagggggtaaagacctattaacccttt 50881482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 54554530 - 54554380
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||| |||||||||||||| |   |||| ||| ||||||| ||||| | |||||||||||||||||| |||||||            |||||||    
T  54554530 tgccacatcaaagattctgctgagttaatgggcttaggtggcaatcgtgaagga-cttcattttacaaggacgaaatctaaaaacaaaatattacagggg 54554432  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  54554431 gcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 54554380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 50880053 - 50879976
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||||| ||||||||||||||    
T  50880053 cacatcatagattctgctgagtcacaaggctcagggggcaatcctgaaaaatctttattttaccaggacggaatctaa 50879976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 46427158 - 46427230
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaa 107  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||| ||||||||||    
T  46427158 cacatcatagattctgctgagtcacagggctcagggggcaatcttgatgaatctttattttataaggacggaa 46427230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 43537752 - 43537826
Alignment:
Q  38 atcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| || |||||| |||||||||||||||    
T  43537752 atcatagattctgctgagtcatatggctcagggggcaatcctgaagaatttttattttagaaggacggaatctaa 43537826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 43537596 - 43537519
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| |||||||||||||||||| |||  ||||||||||| ||||||||||| ||||||||||||||||||||||    
T  43537596 cacatcaaagattctgctgagtcacaaggcatagggggcaatcctgaagaatctttattttacaaggacggaatctaa 43537519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 55499399 - 55499319
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||| ||||||||||||||||   |||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  55499399 tgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatctaa 55499319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 51752794 - 51752686
Alignment:
Q  69 ggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccctatattacagggggtaaat 168  Q
    ||||||||| ||||||||||||||||||||||||||||||||||            |||||||||||||  ||||||| | ||||||||||||||||||     
T  51752794 ggggcaatcgtgaagaatcttcattttacaaggacggaatctaatttattttttttacagggggcaaaatcaaaagtgtcatatattacagggggtaaag 51752695  T
Q  169 acctattaa 177  Q
    |||||||||    
T  51752694 acctattaa 51752686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 55500313 - 55500464
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct-aannnnnnnnnnnnacaggg 130  Q
    |||||||||| |||||||||| |||||   |||| ||||||||||| |||||||||||||||||||| ||| ||||||| ||            ||||||    
T  55500313 tgccacatcaaagattctgcttagtcaacgggcttagggggcaatcgtgaagaatcttcattttacagggatggaatctaaaaaaaataaaattacaggg 55500412  T
Q  131 ggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    |||||||| |||| || ||||||||||| ||||||||| |||||||||||||    
T  55500413 ggcaaaaccaaaaatgtcctatattacaggggggtaaagacctattaaccct 55500464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 179
Target Start/End: Complemental strand, 21994441 - 21994328
Alignment:
Q  64 ctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccctatattacaggggg 163  Q
    |||||||||||||| | ||||||||| ||||||||||||||||||||||            ||||||| |||||  ||||||| ||||||||||||||||    
T  21994441 ctcagggggcaatcctaaagaatctttattttacaaggacggaatctaa--aaaaaaaattacaggggacaaaatcaaaagtgtcctatattacaggggg 21994344  T
Q  164 taaatacctattaacc 179  Q
    |||| |||||||||||    
T  21994343 taaagacctattaacc 21994328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 2438389 - 2438320
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||| | || |||||| |||||| ||||||||||| |||||||||||| |||||||||    
T  2438389 agattctgctgagtcataggggtcagggagcaatcctgaagaatctttattttacaaggatggaatctaa 2438320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 49 - 181
Target Start/End: Original strand, 40479442 - 40479574
Alignment:
Q  49 tgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgcc 148  Q
    ||||||||||   |||| ||||||||||| |||||||||||||||||||||||||||||| |||            |||| || |||||| |||||| ||    
T  40479442 tgctgagtcattgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatttaaaaaaaaaaaattacagaggacaaaaccaaaagtacc 40479541  T
Q  149 ctatattacagggggtaaatacctattaaccct 181  Q
    ||||||||||| || |||  |||||||||||||    
T  40479542 ctatattacagaggataatgacctattaaccct 40479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 550724 - 550673
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||    
T  550724 ggggcaaaactaaaaatgacctatattacagggggtaaagacctattaaccc 550673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 34027196 - 34027251
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||    
T  34027196 acagggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccc 34027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 54555353 - 54555408
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||| ||||||||| |||||||||||||||||| || |||||||||    
T  54555353 acagggggcaaaaccaaaagtgccatatattacagggggtaaagacttattaaccc 54555408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 60 - 182
Target Start/End: Complemental strand, 14183731 - 14183609
Alignment:
Q  60 atggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgccctatattacag 159  Q
    |||||||||||||||||  ||||||||||| ||||||| |||||| |||||||            |||| | ||||||| ||||||||||||||||| ||    
T  14183731 atggctcagggggcaattatgaagaatcttgattttacgaggacgaaatctaaatttatttttttacagagagcaaaaccaaaagtgccctatattagag 14183632  T
Q  160 ggggtaaatacctattaaccctt 182  Q
    ||||||||   ||||||||||||    
T  14183631 ggggtaaaacactattaaccctt 14183609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 43860923 - 43860973
Alignment:
Q  133 caaaactaaaagtgccctatattacagggggtaaatacctattaacccttt 183  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  43860923 caaaaccaaaagtgccctatattacaggaggtaaagacctattaacccttt 43860973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 15695096 - 15695165
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||| |||  ||||| ||||| ||||| ||||||||||||||||||| |||||| |||||||    
T  15695096 agattctgctgactcaactggcttaggggacaatcctgaagaatcttcattttacgaggacgaaatctaa 15695165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 37600952 - 37600875
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatc 109  Q
    |||||||||| |||||||||||||||| | | || || || ||||| | ||||||||| |||||||||||||||||||    
T  37600952 tgccacatcagagattctgctgagtcataggacttagaggccaatcctaaagaatctttattttacaaggacggaatc 37600875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 51754118 - 51754187
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||| || ||||||| | || ||| ||||||||| ||||||||||| ||||||||||||||||||||||    
T  51754118 agattttgttgagtcatagggatcatggggcaatcctgaagaatctttattttacaaggacggaatctaa 51754187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 46426240 - 46426169
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||||||||||||||         | ||||||| |||||||||||| ||||||||||||||||||||||    
T  46426240 tgccacatcatagattctgctgagtca---------gtgggcaattttgaagaatctttattttacaaggacggaatctaa 46426169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 49629780 - 49629701
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||| ||| |||||||||||| ||| ||||||| || || |||| ||||||||||| ||||||| ||||||||||||||    
T  49629780 tgccacgtcagagattctgctgactcaaatggctc-ggaggaaatcctgaagaatctttattttaccaggacggaatctaa 49629701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 9136406 - 9136465
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 184  Q
    |||||||||||||| |||||||  |||||||||||||| ||||| |||||||||| ||||    
T  9136406 acagggggcaaaaccaaaagtgatctatattacaggggataaatgcctattaaccttttt 9136465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 20125443 - 20125481
Alignment:
Q  148 cctatattacagggggtaaatacctattaacccttttat 186  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20125443 cctatattacagggggtaaagacctattaacccttttat 20125481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 49630509 - 49630586
Alignment:
Q  35 cacatcatagattctgctgagtcacatgg-ctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| | |||||||||||||| |||  || |||| |||||| |||| |||||||||||||||||||||||||||||    
T  49630509 cacatcaaaaattctgctgagtca-atgatcttagggtgcaatcgtgaaaaatcttcattttacaaggacggaatctaa 49630586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 9410137 - 9410076
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacg 104  Q
    |||||||||||||||| | || ||||||||||||  |||||||| || ||||||||||||||    
T  9410137 agattctgctgagtcataggggtcagggggcaatactgaagaatatttattttacaaggacg 9410076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 17695884 - 17696012
Alignment:
Q  35 cacatcatagattctgctgagtcacatgg-ctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggc 133  Q
    ||||||| | |||||||||||||| |||| ||  || ||||||| ||||||||||||||||||||| |||| |||||||            |||||||||    
T  17695884 cacatcaaatattctgctgagtca-atggacttcggtggcaatcgtgaagaatcttcattttacaatgacgaaatctaaaataaaaaaattacagggggc 17695982  T
Q  134 aaaactaaaagtgccctatattacaggggg 163  Q
    ||||| ||||||| | ||||||||||||||    
T  17695983 aaaaccaaaagtgtcttatattacaggggg 17696012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 35539805 - 35539838
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    ||||||||||||||||||||||||||||||||||    
T  35539805 cctatattacagggggtaaatacctattaaccct 35539838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 51164022 - 51164075
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaac 178  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||  |||||||||    
T  51164022 acagggggcaaaaccaaaagtgacctatattatagggggtaaaggcctattaac 51164075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 183
Target Start/End: Complemental strand, 21780154 - 21780119
Alignment:
Q  148 cctatattacagggggtaaatacctattaacccttt 183  Q
    |||||||||||||||||||| |||||||||||||||    
T  21780154 cctatattacagggggtaaagacctattaacccttt 21780119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 183
Target Start/End: Complemental strand, 22272962 - 22272927
Alignment:
Q  148 cctatattacagggggtaaatacctattaacccttt 183  Q
    |||||||||||||||||||| |||||||||||||||    
T  22272962 cctatattacagggggtaaaaacctattaacccttt 22272927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 38656066 - 38656117
Alignment:
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaaccctttta 185  Q
    ||||| |||| || ||||||||| |||||||||| |||||||||||||||||    
T  38656066 aaaacaaaaaatgacctatattatagggggtaaagacctattaaccctttta 38656117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 48029469 - 48029411
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 184  Q
    |||||||||||||| |||| || |||| |||||||||||||||  |||||||||||||||    
T  48029469 acagggggcaaaaccaaaa-tgacctaaattacagggggtaaaggcctattaaccctttt 48029411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 50138543 - 50138488
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccc 180  Q
    |||||||| |||||  ||| || |||||||||||||||||||| ||||||||||||    
T  50138543 acagggggaaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 50138488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 51754210 - 51754261
Alignment:
Q  133 caaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 184  Q
    |||||| |||||| |||||||||||||||||||||   ||||||||||||||    
T  51754210 caaaaccaaaagtaccctatattacagggggtaaagctctattaaccctttt 51754261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 15694571 - 15694529
Alignment:
Q  70 gggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||    
T  15694571 gggcaatcctgaagaatcttcattttacgaggaccgaatctaa 15694529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 24215766 - 24215800
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||||||||| ||||||||||||||    
T  24215766 cctatattacagggggtaaagacctattaaccctt 24215800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 50879962 - 50879908
Alignment:
Q  127 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||| ||||||| ||||||| |||||||||||||  ||||| |||||||||||||    
T  50879962 agggagcaaaaccaaaagtggcctatattacaggaagtaaagacctattaaccct 50879908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 7533727 - 7533658
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||   || | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  7533727 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 7533658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 9410200 - 9410269
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| |||||||| | ||  |||||||||||  ||||||||||| |||||||||||| | |||||||    
T  9410200 agattctactgagtcataggggacagggggcaatactgaagaatctttattttacaaggatgaaatctaa 9410269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 11563542 - 11563575
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  11563542 cctatattacagggggtaaagacctattaaccct 11563575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 11861951 - 11861902
Alignment:
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    ||||||| |||||||| |||||||||||||||||||  || |||||||||    
T  11861951 gcaaaaccaaaagtgctctatattacagggggtaaaggcccattaaccct 11861902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 37273420 - 37273453
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  37273420 cctatattacagggggtaaagacctattaaccct 37273453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 37421821 - 37421890
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||| | | || || | |||||||| |||| |||||| |||||||||||| |||||||||    
T  37421821 agattctgctgagttataggggtctgagggcaatcctgaataatctttattttacaaggatggaatctaa 37421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 50727622 - 50727589
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  50727622 cctatattacagggggtaaaaacctattaaccct 50727589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 50735636 - 50735603
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  50735636 cctatattacagggggtaaaaacctattaaccct 50735603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 112
Target Start/End: Complemental strand, 52264545 - 52264512
Alignment:
Q  79 tgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||| ||||||||||||||||||||||    
T  52264545 tgaagaatcttgattttacaaggacggaatctaa 52264512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 9001475 - 9001443
Alignment:
Q  149 ctatattacagggggtaaatacctattaaccct 181  Q
    ||||||||||||||||||| |||||||||||||    
T  9001475 ctatattacagggggtaaaaacctattaaccct 9001443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 9410284 - 9410340
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacag-ggggtaaatacctattaaccc 180  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||   ||||||||||    
T  9410284 acaggggacaaaaccaaaagtgccctatattacagaggggtaaaacactattaaccc 9410340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 11862028 - 11862084
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||| |||||||  ||||||||||  |||||||  ||||||||||||    
T  11862028 acagggggcaaaaccaaaagtgttctatattacaaagggtaaaggcctattaaccct 11862084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 12352470 - 12352514
Alignment:
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaac 178  Q
    ||||| ||||||| ||||||||||||||||||||  |||||||||    
T  12352470 aaaaccaaaagtgacctatattacagggggtaaaggcctattaac 12352514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 13128436 - 13128484
Alignment:
Q  134 aaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    ||||| ||||||| ||||||||| || |||||||| |||||||||||||    
T  13128436 aaaaccaaaagtgacctatattatagagggtaaatgcctattaaccctt 13128484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 16493550 - 16493502
Alignment:
Q  148 cctatattacagggggtaaatacctattaacccttttatttaaaactca 196  Q
    ||||||||||||| |||||| |||||||||||||| | ||||| |||||    
T  16493550 cctatattacaggaggtaaagacctattaacccttgtttttaatactca 16493502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 17289980 - 17290032
Alignment:
Q  127 agggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacc 179  Q
    |||||| ||||| |||| || ||||||||| |||||||||| |||||||||||    
T  17289980 aggggggaaaacaaaaaatgacctatattatagggggtaaagacctattaacc 17290032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 20613021 - 20612969
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaa 177  Q
    |||||||| ||||| ||||||| |||||||| |||||||||||  ||||||||    
T  20613021 acaggggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaa 20612969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 41331824 - 41331768
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    ||||| || ||||| ||||||| |||||||| |||||| |||| |||||||||||||    
T  41331824 acaggaggaaaaaccaaaagtgacctatattgcaggggataaagacctattaaccct 41331768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 54555258 - 54555338
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||| ||| ||||| |||| | ||| | |||||  ||||||||| ||||||||||| |||||||||||||  |||||||    
T  54555258 tgccacgtcagagattttgcttactcaaagggctcgaggggcaatcgtgaagaatctttattttacaaggacataatctaa 54555338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 195 - 346
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct-aannnnnnnnnnnnacaggg 130  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| ||            ||||||    
T  195 tgccacatcatagattctgctgagtcaaagggctcagggggcaatcttgaagaatcttcattttataaggacggaatctaaaaaaaaactttttacaggg 294  T
Q  131 ggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    |||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  295 ggcaaaaccaaaagtgccctatattacatgggggtaaagacctattaaccct 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 10228 - 10076
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||| ||| ||||| ||||||||||   || | ||||||||||  ||||||||||||||||||||||||| ||||||||            |||||||    
T  10228 tgccacctcagagattttgctgagtcaatgggattagggggcaattgtgaagaatcttcattttacaaggactgaatctaattttttttttttacagggg 10129  T
Q  132 gcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctttt 184  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10128 gcaaaactaaaagtgccctatattacagggggtaaagacctattaaccctttt 10076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 11488 - 11557
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    |||||||||||||||| | || ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  11488 agattctgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggacggaatctaa 11557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0804 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 2882 - 2729
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaagg-acggaatctaannnnnnnnnnnnacaggg 130  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||| |||||| |||||||||||            |||||     
T  2882 tgccatatcatagattctgctgagtcacggggctcagggggcaatcttgaagaattttcattt-acaagggacggaatctaaaaaaaaaaatttacagga 2784  T
Q  131 ggcaaaactaaaagtgccctatattacagggg-gtaaatacctattaaccctttt 184  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  2783 ggcaaaaccaaaagtgccctatattacaggggagtaaagacctattaaccctttt 2729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 4856 - 4706
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggg 131  Q
    |||||||||| ||||||||||||||||  || || | ||||||||| ||||||||||||||||||||||||||||||||||            ||||| |    
T  4856 tgccacatcaaagattctgctgagtcaattgacttacggggcaatcgtgaagaatcttcattttacaaggacggaatctaattttttttttttacaggag 4757  T
Q  132 gcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  4756 gcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 4706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 189
Target Start/End: Original strand, 5801 - 5962
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatcta---annnnnnnnnnnnacag 128  Q
    |||||||||| | ||||||||||||||   |||| ||||||||||| ||||| |||||||||||||||||||||||||||   |            |||     
T  5801 tgccacatcaaatattctgctgagtcaatgggcttagggggcaatcgtgaagtatcttcattttacaaggacggaatctataaaaaaaaaaaaattacaa 5900  T
Q  129 ggggcaaaactaaaagtgccctatattacagg-gggtaaatacctattaacccttttattta 189  Q
    |||||||||| ||||||||||||||||||||| | ||||| |||||||||||| ||| ||||    
T  5901 ggggcaaaaccaaaagtgccctatattacaggagtgtaaagacctattaacccattttttta 5962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 43 - 180
Target Start/End: Complemental strand, 64640 - 64503
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaa 142  Q
    |||||||||||||||||| || ||||||||||||| ||||||||||| |||||||||||||| |||||||            |||||||||||||| |||    
T  64640 agattctgctgagtcacaggggtcagggggcaatcctgaagaatctttattttacaaggacgaaatctaa-aaaaaaaaattacagggggcaaaaccaaa 64542  T
Q  143 agtgccctatattaca-gggggtaaatacctattaaccc 180  Q
    ||| |||||||||||| ||||||||| ||||||||||||    
T  64541 agtaccctatattacaggggggtaaagacctattaaccc 64503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 181
Target Start/End: Original strand, 65962 - 66102
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa-nnnnnnnnnnnnacagggggcaaaactaa 141  Q
    ||||||||||||||||   |||| ||||||||||| ||||||||||||||||||||||||||||||||||             |||||||||||||| ||    
T  65962 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaatttttttttttttacagggggcaaaaccaa 66061  T
Q  142 aagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    ||||| | ||||||||| ||||||||| |||||||||||||    
T  66062 aagtgtcatatattacaggggggtaaagacctattaaccct 66102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 49; Significance: 9e-19; HSPs: 3)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 16023 - 15947
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaat 108  Q
    |||||||||||||||| || |||||||   |||| |||||||||||| |||||||||||||||||||||||||||||    
T  16023 tgccacatcatagattttgttgagtcaatgggcttagggggcaatctcgaagaatcttcattttacaaggacggaat 15947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 49 - 181
Target Start/End: Original strand, 17381 - 17513
Alignment:
Q  49 tgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaannnnnnnnnnnnacagggggcaaaactaaaagtgcc 148  Q
    ||||||||||   |||| ||||||||||| |||||||||||||||||||||||||||||| |||            |||| || |||||| |||||| ||    
T  17381 tgctgagtcattgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatttaaaaaaaaaaaattacagaggacaaaaccaaaagtacc 17480  T
Q  149 ctatattacagggggtaaatacctattaaccct 181  Q
    ||||||||||| || |||  |||||||||||||    
T  17481 ctatattacagaggataatgacctattaaccct 17513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 15927 - 15871
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    ||||||| |||||| ||||||| | ||||||||||||| |||| |||||||||||||    
T  15927 acaggggacaaaacaaaaagtgtcatatattacaggggataaagacctattaaccct 15871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 8231 - 8081
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatc-taannnnnnnnnnnnacaggg 130  Q
    |||||| ||| ||||||||||||||||   |||| ||||||||||| |||| |||||||||||||||||||||||||| |||            ||| ||    
T  8231 tgccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatcttaatttttttattttaca-gg 8133  T
Q  131 ggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    |||||||| ||||||| ||||||||||| ||||||||| |||||||||||||    
T  8132 ggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 8081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 15813 - 15663
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatc-taannnnnnnnnnnnacaggg 130  Q
    |||||| ||| ||||||||||||||||   |||| ||||||||||| |||| |||||||||||||||||||||||||| |||            ||| ||    
T  15813 tgccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatcttaatttttttattttaca-gg 15715  T
Q  131 ggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    |||||||| ||||||| ||||||||||| ||||||||| |||||||||||||    
T  15714 ggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 15663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 25765 - 25615
Alignment:
Q  32 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatc-taannnnnnnnnnnnacaggg 130  Q
    |||||| ||| ||||||||||||||||   |||| ||||||||||| |||| |||||||||||||||||||||||||| |||            ||| ||    
T  25765 tgccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatcttaatttttttattttaca-gg 25667  T
Q  131 ggcaaaactaaaagtgccctatattaca-gggggtaaatacctattaaccct 181  Q
    |||||||| ||||||| ||||||||||| ||||||||| |||||||||||||    
T  25666 ggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 25615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 3969 - 3912
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccctt 182  Q
    |||||||||||||| ||||||| |||| ||||||||||||||| ||||||||||||||    
T  3969 acagggggcaaaaccaaaagtgtcctacattacagggggtaaagacctattaaccctt 3912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 4958 - 5017
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattaca--gggggtaaatacctattaaccctt 182  Q
    |||||||||||||| ||||||| |||||||||||  ||||||||| || |||||||||||    
T  4958 acagggggcaaaaccaaaagtgacctatattacagggggggtaaagacttattaaccctt 5017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 20985 - 20908
Alignment:
Q  35 cacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||| ||||||||||||||||   | || ||||||||||| |||| | |||||||||||||||||||||||||||    
T  20985 cacatcagagattctgctgagtcaatagacttagggggcaatcgtgaaaattcttcattttacaaggacggaatctaa 20908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 24857 - 24922
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaat 108  Q
    ||||| |||||||||| | || ||||||||||||| ||||||||||| ||||||||||||||||||    
T  24857 agattttgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggacggaat 24922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 228588 - 228645
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattaca--gggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||    
T  228588 acagggggcaaaactaaaagtgacctatattacacggggggtaaagacctattaaccc 228645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 227423 - 227368
Alignment:
Q  127 agggggcaaaactaaaagtgccctatattacaggg-ggtaaatacctattaaccct 181  Q
    |||||||||||| ||||||| |||||||||||||| |||||| |||||||||||||    
T  227423 agggggcaaaaccaaaagtgacctatattacagggaggtaaagacctattaaccct 227368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 37335 - 37380
Alignment:
Q  67 agggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||    
T  37335 agggggcaatcctgaagaatctttattttacaaggacggaatctaa 37380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 112
Target Start/End: Complemental strand, 30826 - 30793
Alignment:
Q  79 tgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||| ||||||||||||||||||||||    
T  30826 tgaagaatctttattttacaaggacggaatctaa 30793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 8967 - 9036
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||| |||||||||| | || | ||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  8967 agattttgctgagtcataggggttaggaggcaatcctgaagaatctttattttacaaggacggaatctaa 9036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 2797 - 2741
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaa 99  Q
    |||||||||||||||| | || | ||||||||||| |||| |||||| |||||||||    
T  2797 agattctgctgagtcatagggattagggggcaatcctgaataatctttattttacaa 2741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 7420 - 7364
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaa 99  Q
    |||||||||||||||| | || | ||||||||||| |||| |||||| |||||||||    
T  7420 agattctgctgagtcatagggattagggggcaatcctgaataatctttattttacaa 7364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 35654 - 35598
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||| ||||||| ||||||||  |||||||||| |||||||||||||    
T  35654 acagggggcaaaaccaaaagtgacctatattttagggggtaaagacctattaaccct 35598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 638 - 694
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacagggggtaaatacctattaaccct 181  Q
    |||||||| ||||| | || || |||||||||||| ||||||| |||||||||||||    
T  638 acaggggggaaaaccataaatgacctatattacagagggtaaagacctattaaccct 694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 91101 - 91041
Alignment:
Q  129 ggggcaaaactaaaagtgccctatattacagggggtaaatacctattaacccttttattta 189  Q
    |||| ||||||| || || |||||||||||||||||||| |||||||||||||||| ||||    
T  91101 gggggaaaactagaaatgacctatattacagggggtaaagacctattaaccctttttttta 91041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 36199 - 36138
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacg 104  Q
    |||||||||||||||| | || | ||||||||||| |||| |||||| ||||||||||||||    
T  36199 agattctgctgagtcataggggttagggggcaatcctgaaaaatctttattttacaaggacg 36138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 110465 - 110406
Alignment:
Q  125 acagggggcaaaactaaaagtgccctatattacaggggg-taaatacctattaacccttt 183  Q
    |||||| ||||||| ||||||| | |||||||||||||| ||||| ||||||||||||||    
T  110465 acagggagcaaaaccaaaagtgacatatattacagggggataaatgcctattaacccttt 110406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1571 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1571
Description:

Target: scaffold1571; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 183 - 114
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||   || | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  183 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1147 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1147
Description:

Target: scaffold1147; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 2598 - 2529
Alignment:
Q  43 agattctgctgagtcacatggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaa 112  Q
    ||||||||||||||||   || | ||||| ||||| ||||||||||||||||| |||||  |||||||||    
T  2598 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaa 2529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 4176 - 4209
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccct 181  Q
    |||||||||||||||||||| |||||||||||||    
T  4176 cctatattacagggggtaaagacctattaaccct 4209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 4452 - 4484
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  4452 cctatattacagggggtaaagacctattaaccc 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 34851 - 34883
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  34851 cctatattacagggggtaaagacctattaaccc 34883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 1859 - 1827
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  1859 cctatattacagggggtaaagacctattaaccc 1827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 26340 - 26308
Alignment:
Q  148 cctatattacagggggtaaatacctattaaccc 180  Q
    |||||||||||||||||||| ||||||||||||    
T  26340 cctatattacagggggtaaagacctattaaccc 26308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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