View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5654_1D_high_10 (Length: 383)
Name: NF5654_1D_high_10
Description: NF5654_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5654_1D_high_10 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 321; Significance: 0; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 22 - 370
Target Start/End: Complemental strand, 4679037 - 4678690
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4679037 |
tcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcctgcactttgggaatcctcgatgaaccacccacaagaacaa |
4678938 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678937 |
catcatcaatattactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
4678838 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678837 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatcta-ctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
4678739 |
T |
|
| Q |
322 |
caggcagttctcaacctccataagggttttgcgttcttactgatgtcca |
370 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
4678738 |
caggcagttctcaacctccttaagggttttgcgttcttactaatgtcca |
4678690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 340
Target Start/End: Original strand, 15594722 - 15595040
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
|||||||||||||| ||| ||||||| ||||| | || ||||| || | |||||| | |||||||||||||||||| || || ||||| |||| |||| |
|
|
| T |
15594722 |
tcatcagggttgatgctcatgcacaattcctttccctcgaaaaaatccttcaatagttgttgcactttgggaatcctagaagacccaccaacaatgacaa |
15594821 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
||||| | | |||| |||||| | |||| ||||||||||| ||| | | |||||| || || |||| |||||| || ||||| |||||||| |
|
|
| T |
15594822 |
tatcatttacactactcttattcatcttagcatcatcaagacaactctcaactatcttcatacaatccttaaaaaagtccatgttgatttcttcaaactt |
15594921 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
321 |
Q |
| |
|
|| |||||||| |||||| | ||||| || || | ||||||| |||||||||||| || |||||| | ||||||||| ||| |||||||| ||| |
|
|
| T |
15594922 |
ggaacgagtaaccgatgaaaagaagtcaataccgttaaataaacaatctacctcaatggtagtgacagtagtaaaagagagtaccctttttgccctttcg |
15595021 |
T |
|
| Q |
322 |
caggcagttctcaacctcc |
340 |
Q |
| |
|
|| ||||||||||| |||| |
|
|
| T |
15595022 |
cacgcagttctcaatctcc |
15595040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 340
Target Start/End: Complemental strand, 34467089 - 34466955
Alignment:
| Q |
198 |
gtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaa |
297 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| || || ||| ||||| ||| ||| | |||||||||||| |||||||| | |||||| |
|
|
| T |
34467089 |
gtccatattgatttcctcaaacttggcacgagtgattgacgaatggaagtcaattacctcatataaagaatctatttcaacagtagcgacaaa------- |
34466997 |
T |
|
| Q |
298 |
gagagtgtcctctttgccctctcgcaggcagttctcaacctcc |
340 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
34466996 |
-agagtgtcctctttgcattctcgcacgcagttctcaacctcc |
34466955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 52549334 - 52549269
Alignment:
| Q |
180 |
catacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaa |
245 |
Q |
| |
|
||||||||| || |||||||||||||| ||||||||||||||||| | | | || ||||||||||| |
|
|
| T |
52549334 |
catacactccttaaaaaggtccatattcatttcctcaaacttggccctattgatcgatgaagaaaa |
52549269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 22 - 340
Target Start/End: Complemental strand, 16657997 - 16657679
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
||||| ||||||||||| ||||| |||||||| | ||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
16657997 |
tcatccgggttgatacttttgcataaatccttgcccttgaaaaagtcttgcaatagatcctgcactttgggaatcctagatgagccacccacaagaacaa |
16657898 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
| ||||||||||||| | ||||||||||||||| ||||||| ||| |||||||| ||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
16657897 |
cgtcatcaatatcaccaatgtgcatctttgaatcacgaagacaattctcaacagttttcatacactcattgaaaagatccatattaatttcctcaaactt |
16657798 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
321 |
Q |
| |
|
|||||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
16657797 |
ggcacgggtgattgatgaagaaaagtcaattccctgaaataaagaatctacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctca |
16657698 |
T |
|
| Q |
322 |
caggcagttctcaacctcc |
340 |
Q |
| |
|
|| |||||||||||||||| |
|
|
| T |
16657697 |
catgcagttctcaacctcc |
16657679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 14703096 - 14703426
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
||||||||||| || || |||||||| ||||||| || |||||||| || |||| | || ||||||||||||| || || ||||| |||||||||| |
|
|
| T |
14703096 |
tcatcagggttaatgctgttgcacaactccttcccctggaaaaagtcctgtaataattgctgtactttgggaatccgagaagacccaccgacaagaacaa |
14703195 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
||||||| | |||| | |||||| | |||| |||||||||||| |||| | | || |||||| || |||| ||||||||| ||||| |||||||| |
|
|
| T |
14703196 |
catcatctactctactcttgtccatcttagcatcaataagacaactctcaacaatcttcacacactcattaaaaaagtccatattcatttcttcaaactt |
14703295 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
321 |
Q |
| |
|
||| | | | || |||||||||||||| || | |||||||||| ||||||||||| ||||| ||||| |||||| ||||| || |||||||||||| |
|
|
| T |
14703296 |
ggccctattgatcgatgaagaaaagtcaatgcattgaaataaagcatctacctcaatagtggcgacaacttggaaagaaagtgttctttttgccctctcg |
14703395 |
T |
|
| Q |
322 |
caggcagttctcaacctccataagggttttg |
352 |
Q |
| |
|
|| || |||||||| |||| ||||| ||||| |
|
|
| T |
14703396 |
caagcggttctcaagctccttaaggcttttg |
14703426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 153 - 338
Target Start/End: Original strand, 43625231 - 43625416
Alignment:
| Q |
153 |
atcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctatt |
252 |
Q |
| |
|
|||| ||||||||||||||||||||| || ||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||||| | ||||| || |
|
|
| T |
43625231 |
atcaataagacaactcttaacagttttcaaacactcgttgaaaagatccatatttatttcatcaaatttggcacgagtgattgatgaaaagaagtcaata |
43625330 |
T |
|
| Q |
253 |
ccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacct |
338 |
Q |
| |
|
|| | ||||||||||||||||||| |||| ||| | || ||||| |||||||| ||| | |||||||| || ||||||||||| |
|
|
| T |
43625331 |
ccacggaataaagaatctacctcaatagtgctgaacgaagcaaaagacagtgtcctttttcctctctcgcatgccgttctcaacct |
43625416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 180 - 340
Target Start/End: Original strand, 7542072 - 7542232
Alignment:
| Q |
180 |
catacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaaca |
279 |
Q |
| |
|
|||||||||||| ||||| |||||||| || |||||||||||||| | | | || |||||||||||||| || || |||||||||||||||||||||| | |
|
|
| T |
7542072 |
catacactcgttaaaaagatccatattcatctcctcaaacttggccctattgatcgatgaagaaaagtcaatgccttgaaataaagaatctacctcaata |
7542171 |
T |
|
| Q |
280 |
gtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctcc |
340 |
Q |
| |
|
|||| |||| |||||| |||| || ||||||||||| || |||||||||||||||| |
|
|
| T |
7542172 |
gtggcaacaacaaggaaagaaagtgatctttttgccctctcacaagcagttctcaacctcc |
7542232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 277
Target Start/End: Original strand, 12234380 - 12234632
Alignment:
| Q |
25 |
tcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacat |
124 |
Q |
| |
|
|||||||| ||||||||||||| ||||||| ||| ||||| || |||||||| | ||||||||||||||||| || || || || | ||| ||||| | |
|
|
| T |
12234380 |
tcagggttaatactcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttgggaatcctagaggacccgccaataaggacaactt |
12234479 |
T |
|
| Q |
125 |
catcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggc |
224 |
Q |
| |
|
|||| | ||| | |||||| | ||||||||||||||||| |||| | | ||||||||| | | ||| |||||||| ||||||||||||||||| |
|
|
| T |
12234480 |
catccaccctacttttgtccatcttagcatcactaagacaactctcaacaatcttcatacactcaataagaagatccatattcatttcctcaaacttggc |
12234579 |
T |
|
| Q |
225 |
acgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaa |
277 |
Q |
| |
|
| | | || ||||||||||| || || || | |||||||||||||||||||| |
|
|
| T |
12234580 |
cctattgatcgatgaagaaaaatcaatgccttcaaataaagaatctacctcaa |
12234632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 277
Target Start/End: Complemental strand, 12245883 - 12245631
Alignment:
| Q |
25 |
tcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacat |
124 |
Q |
| |
|
|||||||| || ||||||||||| ||||||| || |||||||| || ||||| | ||| |||||||||||||| || || ||||| ||||| |||| || |
|
|
| T |
12245883 |
tcagggttaatgctcttgcacaattccttcccgttgaaaaagtcctgtaatagctgttggactttgggaatcctagaagatccaccaacaagtacaaaat |
12245784 |
T |
|
| Q |
125 |
catcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggc |
224 |
Q |
| |
|
|||| ||| |||| | |||||||| ||| ||| |||||||| |||||| | ||||| || || | ||| || | ||| | |||||||||||| || |
|
|
| T |
12245783 |
catctatagtactcttgtccatctttgcatccataatacaactctcaacagtctttatacaatcattaagaagatctaaattcaattcctcaaactttgc |
12245684 |
T |
|
| Q |
225 |
acgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaa |
277 |
Q |
| |
|
||| | || ||||||||||| || || || |||||||||||||||||||||| |
|
|
| T |
12245683 |
ccgattgatggatgaagaaaaatcaatgccttgaaataaagaatctacctcaa |
12245631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 277
Target Start/End: Original strand, 11999096 - 11999350
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
||||||||||| || ||||||||||| ||||||| || |||||||| || ||||| | ||| ||||||||| |||| || || ||||| ||||| |||| |
|
|
| T |
11999096 |
tcatcagggttaatgctcttgcacaactccttcccgttgaaaaagtcatgtaatagctgttggactttggga-tcctagaagatccaccaacaagtacaa |
11999194 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
||||||| ||| |||| | |||||||| ||| ||| |||||||| |||||| | ||||| || || | ||| || | ||| | |||||||||||| |
|
|
| T |
11999195 |
catcatctatagtactcttgtccatctttgcatccataatacaactctcaacagtctttatacaatcattaagaagatctaaattcaattcctcaaactt |
11999294 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaa |
277 |
Q |
| |
|
|| ||| | || ||||||||||| || || || |||||||||||||||||||||| |
|
|
| T |
11999295 |
tgcccgattgatggatgaagaaaaatcaatgccttgaaataaagaatctacctcaa |
11999350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 277
Target Start/End: Complemental strand, 12259061 - 12258806
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
|||||||| || || ||||||||||| || |||| ||| ||||| || || ||||| | ||||||||| ||||||| || || ||||| ||||| |||| |
|
|
| T |
12259061 |
tcatcaggattaatgctcttgcacaactctttccccttgaaaaaatcctgtaatagctgctgcactttgagaatcctagaagacccacctacaaggacaa |
12258962 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
||||||| | || |||| | | | || | ||| |||||||||||| |||||| | ||| || || |||||||| |||| ||| |||||||||||||| |
|
|
| T |
12258961 |
catcatctacattactcttgtccgtgttagcatccgtaagacaactctcaacagtcttcatgcattcattgaaaagttccaaatttatttcctcaaactt |
12258862 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaa |
277 |
Q |
| |
|
||||||| | || |||| |||||| || || || | | |||||||||||| ||||| |
|
|
| T |
12258861 |
ggcacgattgattgatgcagaaaaatcaatgccatcacataaagaatctatctcaa |
12258806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 340
Target Start/End: Complemental strand, 16662472 - 16662154
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||| || || |||| |||||| || |||||||| |||||||| || || || || |||||||||| |
|
|
| T |
16662472 |
tcatcagggttgatgctcttgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaa |
16662373 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
||||| | | | | | | |||||||||||| || |||||||| |||| | | |||||||||||| |||||| ||||||| ||||| |||||||| |
|
|
| T |
16662372 |
tatcatgtacaccccccttgtccatctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggcccatattgatttcttcaaactt |
16662273 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
321 |
Q |
| |
|
| ||||||| | |||| ||| ||||| || ||| ||||| |||| | ||||| || |||||| || ||||||||||||||| || ||| | || |
|
|
| T |
16662272 |
gacacgagtgagtgatgtagagaagtcaatgtcctcgtataaataatcaatctcaatagcggtgaccaatttgaaagagagtgtccttttcgccttttca |
16662173 |
T |
|
| Q |
322 |
caggcagttctcaacctcc |
340 |
Q |
| |
|
|| | |||||||||||||| |
|
|
| T |
16662172 |
caagaagttctcaacctcc |
16662154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 172; Significance: 2e-92; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 61 - 352
Target Start/End: Original strand, 8659090 - 8659381
Alignment:
| Q |
61 |
aaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaa |
160 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||| |||||||||||| | || |||||||| |||| |
|
|
| T |
8659090 |
aaaaggtcttgcaatagatcttgcactttgggaatcctagacgaaccacccacaagaacaatatcgtcaatatcactcatctgtatttttgaatcgctaa |
8659189 |
T |
|
| Q |
161 |
gacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaa |
260 |
Q |
| |
|
||||||||| |||||||| ||||||||| || ||||| |||||||| |||||||||||| |||||||||| || ||||| | ||||||||||||||||| |
|
|
| T |
8659190 |
gacaactctcaacagttttcatacactcattaaaaagatccatattcatttcctcaaacctggcacgagtgattaatgaacagaagtctattccctgaaa |
8659289 |
T |
|
| Q |
261 |
taaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagggttttg |
352 |
Q |
| |
|
||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||| |
|
|
| T |
8659290 |
taaagaatcgacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacaggcagttctcaacctccttaaggattttg |
8659381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 22 - 370
Target Start/End: Complemental strand, 10494854 - 10494506
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
||||| |||||||||| | || | || ||||||| ||| ||||| ||| |||||||||| ||||||||||||||||| || || |||||||||||||||| |
|
|
| T |
10494854 |
tcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaa |
10494755 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
||||||||||||| || | ||||||||||| || |||||||| | |||| | | |||||||||| |||||| ||| ||||||||||||||||| || |
|
|
| T |
10494754 |
tatcatcaatatcattcttgtatatctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaagtctatattaatttcctcaaattt |
10494655 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
321 |
Q |
| |
|
||||||||| || |||||||||||||| |||||| |||||||| ||| |||||||| ||||||||||| | ||||||||| |||| ||||||||||| |
|
|
| T |
10494654 |
ggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctca |
10494555 |
T |
|
| Q |
322 |
caggcagttctcaacctccataagggttttgcgttcttactgatgtcca |
370 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| ||| ||||||||||| |
|
|
| T |
10494554 |
caggcagttctcaacctccttaaggattttggattcccactgatgtcca |
10494506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 22 - 352
Target Start/End: Original strand, 8654138 - 8654468
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
||||| ||||||||| || | ||||| |||||| ||| ||||| ||| |||||||||| ||||||||||||||||| || || |||||||| || |||| |
|
|
| T |
8654138 |
tcatctgggttgatattcataaacaaagccttccccttgaaaaactctagcaatagatcctgcactttgggaatcctagacgagccacccacgagtacaa |
8654237 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
|||||||||||||| || | ||||||||||| || |||||||| | |||| | | |||||||| ||||||| ||||||||||||||||||||| || |
|
|
| T |
8654238 |
catcatcaatatcattcttgtatatctttgaatctctgagacaactgtcaacaatattgatacactcattgaaaaagtccatattaatttcctcaaattt |
8654337 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
321 |
Q |
| |
|
|||||||| || |||||||||||||| |||||| |||||||| |||||||||||||||||||||||| | ||||||||| |||| ||||||||||| |
|
|
| T |
8654338 |
agcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtgacaaaagtaaaagagagtatcctttttgccctctca |
8654437 |
T |
|
| Q |
322 |
caggcagttctcaacctccataagggttttg |
352 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| |
|
|
| T |
8654438 |
caggcagttctcaacctccttaaggattttg |
8654468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 61 - 346
Target Start/End: Original strand, 1301187 - 1301472
Alignment:
| Q |
61 |
aaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaa |
160 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||||| || || |||||||||||||||| |||||| ||||||||| || || |||||||| |||| |
|
|
| T |
1301187 |
aaaatgtcttgcaatatatcttgcactttgggaatcctagacgagccacccacaagaacaatatcatcgatatcactcatgcatatttttgaatcgctaa |
1301286 |
T |
|
| Q |
161 |
gacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaa |
260 |
Q |
| |
|
||||||||| ||| |||| ||||||| || ||||| |||||||||||||||||||||||||||||||| || ||||| | ||||| ||||||||||| |
|
|
| T |
1301287 |
gacaactctcaacggtttttgtacactcattaaaaagatccatattaatttcctcaaacttggcacgagtgattaatgaacagaagtcgattccctgaaa |
1301386 |
T |
|
| Q |
261 |
taaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagg |
346 |
Q |
| |
|
||||||||| |||||||| |||||||| || || |||||||||||||| ||||||||||| || ||| |||||||||||| ||||| |
|
|
| T |
1301387 |
taaagaatcgacctcaacggtggtgactaaagcaaaagagagtgtcctttttgccctctcacacgcaattctcaacctccttaagg |
1301472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 28 - 370
Target Start/End: Original strand, 8667113 - 8667455
Alignment:
| Q |
28 |
gggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
127 |
Q |
| |
|
|||||||||| | || | || ||||||| ||| ||| | ||| ||||| | || ||||||||||||||||| || || ||||| ||||| |||||||||| |
|
|
| T |
8667113 |
gggttgatacccatgaataattccttccccttgaaatattctagcaattgttcctgcactttgggaatcctagacgagccaccgacaagtacaacatcat |
8667212 |
T |
|
| Q |
128 |
caatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacg |
227 |
Q |
| |
|
|||||||| || | ||||||||||| || ||||| | | ||| | | ||||||||| ||||||| |||||| |||| ||||||||| || ||||| |
|
|
| T |
8667213 |
caatatcattcttgtatatctttgaatccctgagacaggtgtcaactatattcatacactcattgaaaaagtccatgttaagttcctcaaatttagcacg |
8667312 |
T |
|
| Q |
228 |
agtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggca |
327 |
Q |
| |
|
|||||| |||||| ||||||| |||||| |||||||| |||||||||||||||||| ||||| || ||||||||| |||| ||||||||||| |||||| |
|
|
| T |
8667313 |
agtaattgatgaacaaaagtcgattcccgtaaataaagcatctacctcaacagtggtaacaaaagcaaaagagagtatcctttttgccctctcacaggca |
8667412 |
T |
|
| Q |
328 |
gttctcaacctccataagggttttgcgttcttactgatgtcca |
370 |
Q |
| |
|
||||||||||||| ||||| ||||| ||||| ||||||||||| |
|
|
| T |
8667413 |
gttctcaacctccttaaggattttgggttctgactgatgtcca |
8667455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 145 - 357
Target Start/End: Complemental strand, 13333813 - 13333601
Alignment:
| Q |
145 |
atctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaa |
244 |
Q |
| |
|
||||||||||| || |||||||| | |||| | | |||||||||| |||||| ||| ||||||||||||||||| ||||||||||| || |||||||||| |
|
|
| T |
13333813 |
atctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaa |
13333714 |
T |
|
| Q |
245 |
agtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataa |
344 |
Q |
| |
|
|||| |||||| |||||||| |||||| ||||||||||||||||| | || |||||| |||| ||| ||||||| ||||||||||||||||||| ||| |
|
|
| T |
13333713 |
agtcgattcccataaataaagcatctacttcaacagtggtgacaaaagaaaaggagagtatccttttttccctctcacaggcagttctcaacctccttaa |
13333614 |
T |
|
| Q |
345 |
gggttttgcgttc |
357 |
Q |
| |
|
|| ||||| |||| |
|
|
| T |
13333613 |
ggattttgggttc |
13333601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 340
Target Start/End: Original strand, 17267627 - 17267945
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
||||||||||||||||| ||||| || ||||||| ||| || |||| |||||||| | |||||||| |||||||| || || ||||| ||||| |||| |
|
|
| T |
17267627 |
tcatcagggttgatacttttgcataattccttccccttgaagaagttctgcaatagttgctgcactttcggaatcctagaagacccaccaacaaggacaa |
17267726 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
||||||||| ||| | ||||| | |||||||||||| ||| |||| | ||||| ||||| | |||||||||||||| |||||||||||||| |
|
|
| T |
17267727 |
catcatcaactctgctcttgtcaatcttagcatcactaagacacttctcaacaatctccatgcactcatcaaaaaggtccatattgatttcctcaaactt |
17267826 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
321 |
Q |
| |
|
||||||||| || || |||||||| || | |||| |||||||| |||||||||||| |||| ||| |||||||||| |||||||| ||||| | || |
|
|
| T |
17267827 |
ggcacgagtgattgacgaagaaaaatcaacacccttaaataaagcgtctacctcaacattggtcacagaggcgaaagaaagtgtcctttttgctttttca |
17267926 |
T |
|
| Q |
322 |
caggcagttctcaacctcc |
340 |
Q |
| |
|
|| |||||||||||||||| |
|
|
| T |
17267927 |
catgcagttctcaacctcc |
17267945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 320
Target Start/End: Complemental strand, 27831355 - 27831057
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||| | ||| |||||||| |||||| | ||||||||||||||||| || || ||||| ||||| |||| |
|
|
| T |
27831355 |
tcatcaggattgatgctcttgcacaaatcctttcccttgaaaaagtccgccaatagctgctgcactttgggaatccttgaagagccaccaacaaggacaa |
27831256 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
||||||| ||| |||| | |||||| || ||| | |||||||||| |||||| |||||||| || ||||||||||||||||| |||||||||||||| |
|
|
| T |
27831255 |
catcatctatactactcttgtccatcttagagtcagtgagacaactctcaacagtctccatacattcattgaaaaggtccatattgatttcctcaaactt |
27831156 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctc |
320 |
Q |
| |
|
|||||||| || |||| | ||||| || |||| |||||| | ||||| ||||| ||| ||| ||| | |||||||||||||| |||||| |||| |
|
|
| T |
27831155 |
tgcacgagtgatcattgaaaagaagtcaatgccctcaaataaggcatctatctcaatagtagtgtcaacagaaaaagagagtgtcctttttgccttctc |
27831057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 357
Target Start/End: Original strand, 17259929 - 17260264
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
|||||||||||||| |||||||| || ||||| | ||| || || || |||||||| | |||||||| |||||||| || || ||||| ||||| |||| |
|
|
| T |
17259929 |
tcatcagggttgatgctcttgcataattccttacccttgaagaaatcctgcaatagttgctgcactttcggaatcctagaagatccaccaacaaggacaa |
17260028 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
|||||||||| ||| | ||||| |||||||||||| ||| |||| | ||||| ||||| | |||||||||||||| ||||| |||||||| |
|
|
| T |
17260029 |
catcatcaattctgctcttgtcaatcttaccatcactaagacacttctcaacaatctccatgcactcataaaaaaggtccatattgatttcttcaaactt |
17260128 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
321 |
Q |
| |
|
||||||||| || || |||||||| | | |||| |||||||| |||||||||||| |||| ||| |||| ||||| |||||||| ||||| | || |
|
|
| T |
17260129 |
ggcacgagtgattgacgaagaaaaattaacacccttaaataaagcgtctacctcaacattggtcacagaggcaaaagaaagtgtcctttttgctttttca |
17260228 |
T |
|
| Q |
322 |
caggcagttctcaacctccataagggttttgcgttc |
357 |
Q |
| |
|
|| |||||||||||||||| ||||| ||||| |||| |
|
|
| T |
17260229 |
catgcagttctcaacctccttaaggcttttgggttc |
17260264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 162 - 286
Target Start/End: Original strand, 3147092 - 3147216
Alignment:
| Q |
162 |
acaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaat |
261 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||| |||||||| ||||||||||||||||||||||| || |||||| | ||||| | |||||||||| |
|
|
| T |
3147092 |
acaactcttaacagtttccaaacactcagtgaaaagatccatattgatttcctcaaacttggcacgagtgattgatgaaaataagtcaaatccctgaaat |
3147191 |
T |
|
| Q |
262 |
aaagaatctacctcaacagtggtga |
286 |
Q |
| |
|
|||||||||| ||||| ||||||| |
|
|
| T |
3147192 |
aaagaatctatctcaatggtggtga |
3147216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 338
Target Start/End: Original strand, 6789200 - 6789516
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||| | | | |||| ||||||||||| | ||||||||||||||| || || || ||||| ||||| |||| |
|
|
| T |
6789200 |
tcatcagggttgatgctcatgcacaaatcctttcccatgaaaacttcttgcaatagttgttgcactttgggaattctagaagacccaccaacaaggacaa |
6789299 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
|||||| | | |||| | |||||| | ||| ||||||||||| ||| || | ||||||||| || |||| |||||||| |||||||||||||| |
|
|
| T |
6789300 |
catcatttacaatactcttgtccatcttagcgtcaacaagacaactctcaacggtcttcatacactcattaaaaatatccatattgatttcctcaaactt |
6789399 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
321 |
Q |
| |
|
||| ||||||| |||||| ||||| || |||||||||||||| |||||||||| ||| ||||| | | ||||||||| ||| || ||||| || |
|
|
| T |
6789400 |
ggcccgagtaagtgatgaaatgaagtcgatgccctgaaataaagagtctacctcaatagtagtgacgacaacaaaagagagtacccttttggccctttca |
6789499 |
T |
|
| Q |
322 |
caggcagttctcaacct |
338 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
6789500 |
cacgcagttctcaacct |
6789516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 287
Target Start/End: Original strand, 8616369 - 8616634
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||| | |||||||| |||||| || |||||||| |||||||| || || ||||| |||||||||| |
|
|
| T |
8616369 |
tcatcaggattgatgttcttgcacaaatccttcccatcgaaaaagtcactcaatagttcctgcactttaggaatcctagacgagccaccgacaagaacaa |
8616468 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
|||||| | | |||| ||||| |||||| ||| |||||||| |||||| | ||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
8616469 |
tatcatctacactactcttctctatcttagaatcattaaaacaactctcaacagtctttatacactcgttaaaaaggtccatattgatttcctcaaactt |
8616568 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgac |
287 |
Q |
| |
|
||||||| || |||||||| || || || |||| | ||||| |||| | ||||| ||| ||||| |
|
|
| T |
8616569 |
aacacgagtgattgatgaagagaaatcgatgccctcacataaataatcaatctcaatagtagtgac |
8616634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 85 - 346
Target Start/End: Original strand, 8646628 - 8646889
Alignment:
| Q |
85 |
actttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatac |
184 |
Q |
| |
|
||||| ||||| || || || ||||| |||||||||||||||| ||| |||| | |||||| | |||| || ||||||||| ||||||||||| || |
|
|
| T |
8646628 |
acttttggaattctagaggagccaccaacaagaacaacatcatggatagaactcttgtccatcttggcatcattatgacaactctcaacagtttccaaac |
8646727 |
T |
|
| Q |
185 |
actcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggt |
284 |
Q |
| |
|
| ||| |||| || |||||||| ||| | ||||| ||||||||||| || |||||| |||||| || || | |||||||||||||| |||| ||||| |
|
|
| T |
8646728 |
attcgatgaacagatccatattgattgcgtcaaatttggcacgagtgattgatgaaataaagtcaatgccattaaataaagaatctaattcaatggtggt |
8646827 |
T |
|
| Q |
285 |
gacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagg |
346 |
Q |
| |
|
| | | || ||||| |||||||| ||||| |||||||| || ||||||||||||| ||||| |
|
|
| T |
8646828 |
gcaagaagcaaaagatagtgtcctttttgctctctcgcatgccgttctcaacctccttaagg |
8646889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 8383317 - 8383148
Alignment:
| Q |
61 |
aaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaa |
160 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||||| | | |||| | |||||| | |||| ||| |
|
|
| T |
8383317 |
aaaaagtgttgcaatagctcttgcactttgggaatcctcgaagaaccaccgatgagaacaacatcatctacactactcttgttcatcttagcatcagtaa |
8383218 |
T |
|
| Q |
161 |
gacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagt |
230 |
Q |
| |
|
|||| |||| |||||| |||||||||| | || ||||||||||| | || |||||| ||||| ||||| |
|
|
| T |
8383217 |
gacagctctcaacagtctccatacacttttcaaataggtccatattgagttgctcaaatttggcccgagt |
8383148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 340
Target Start/End: Original strand, 8545321 - 8545639
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
||||||||||| || |||||||| || ||||||| ||||||||| || || ||||| | | |||||| |||||||| || ||||| || ||||| |||| |
|
|
| T |
8545321 |
tcatcagggttaatgctcttgcataattccttccccttaaaaaactcctgtaatagctgtctcactttaggaatcctagaagaaccgccaacaaggacaa |
8545420 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
||||||| | | || | | |||||| | |||| |||||||| |||||||| |||||||||| | || ||||||||||| | || ||||||||| |
|
|
| T |
8545421 |
catcatctacactacccttgtccatcttagcatcaacaagacaacaattaacagtgtccatacacttttcaaagaggtccatattcaattgctcaaactt |
8545520 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
321 |
Q |
| |
|
||| ||||| || ||||| ||||||| || || ||| |||||| ||||| |||| |||| || | || | || |||||||| |||||| |||| |
|
|
| T |
8545521 |
ggcccgagtgatgcatgaacaaaagtcaataccttgatataaagcatctaggtcaattgtggcctcagtgtcgtatgaaagtgtcctttttgccttctca |
8545620 |
T |
|
| Q |
322 |
caggcagttctcaacctcc |
340 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
8545621 |
caggcagttctcaacctcc |
8545639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 8673979 - 8673894
Alignment:
| Q |
144 |
catctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgag |
229 |
Q |
| |
|
|||||| | |||| |||||||| ||| ||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| |
|
|
| T |
8673979 |
catcttggcatcaataagacaattctcaacagtttccaaacactcgttgaaaagattgatattgatttcctcaaacttggcacgag |
8673894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 8590352 - 8590432
Alignment:
| Q |
48 |
atccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
128 |
Q |
| |
|
|||||||| | ||||||||||||||||||| | ||||||||||||||||| || |||||||| ||||| ||||||||||| |
|
|
| T |
8590352 |
atccttccccataaaaaagtcttgcaatagctgctgcactttgggaatcctagaagaaccaccaacaagtacaacatcatc |
8590432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 7878213 - 7878107
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
||||| |||||||| || |||| | |||||||| |||||||||||| |||||||| | ||||||||| ||||||| ||||| ||||| ||||| |||| |
|
|
| T |
7878213 |
tcatccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcactttgagaatcctagatgatccaccaacaagtacaa |
7878114 |
T |
|
| Q |
122 |
catcatc |
128 |
Q |
| |
|
||||||| |
|
|
| T |
7878113 |
catcatc |
7878107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 8586063 - 8585966
Alignment:
| Q |
145 |
atctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaaga |
242 |
Q |
| |
|
||||| ||||| |||||||||||| |||||| | |||||||| || |||||||||||||| ||||||||||||||| |||| || || |||||||| |
|
|
| T |
8586063 |
atcttagaatcggtaagacaactctcaacagtatttatacactcattaaaaaggtccatattgatttcctcaaacttgacacgcgtgattgatgaaga |
8585966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 290
Target Start/End: Original strand, 8664159 - 8664289
Alignment:
| Q |
158 |
taagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctg |
257 |
Q |
| |
|
|||||||||||| ||||||||||| |||| ||||||||| |||||||| ||||| ||| |||||||||||| | ||| || | |||| || | ||| |
|
|
| T |
8664159 |
taagacaactctcaacagtttccaaacac--gttgaaaagatccatattgatttcatcatacttggcacgagcgaaggataaaaagaagtttaagcgctg |
8664256 |
T |
|
| Q |
258 |
aaataaagaatctacctcaacagtggtgacaaa |
290 |
Q |
| |
|
||| ||||||||||||| || |||||||||||| |
|
|
| T |
8664257 |
aaacaaagaatctaccttaatagtggtgacaaa |
8664289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 29582321 - 29582248
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaat |
95 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||| ||| ||||| ||||||||||| | |||||||||||||| |
|
|
| T |
29582321 |
tcatcagggttgatgctcatgcacaaatccttccccttgaaaaattcttgcaatagctgatgcactttgggaat |
29582248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 230
Target Start/End: Original strand, 8581388 - 8581596
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
|||||||||||||| |||||||| || ||||||| || ||||| || || ||||| | | |||||| |||||||| || |||||||| ||||| |||| |
|
|
| T |
8581388 |
tcatcagggttgatgctcttgcataattccttcccctggaaaaactcctgtaatagctgtctcactttaggaatcctagaagaaccaccaacaaggacaa |
8581487 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
||||||| | | || || | |||||| | ||| ||||||||| |||||||| |||||||||| | || |||| |||||| |||| ||||||||| |
|
|
| T |
8581488 |
catcatctacactacccctgtccatcttagcatcggcaagacaactattaacagtgtccatacacttttcaaagaggttcatattcatttgctcaaactt |
8581587 |
T |
|
| Q |
222 |
ggcacgagt |
230 |
Q |
| |
|
||| ||||| |
|
|
| T |
8581588 |
ggcccgagt |
8581596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 240
Target Start/End: Original strand, 8537784 - 8537942
Alignment:
| Q |
82 |
tgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttcca |
181 |
Q |
| |
|
||||||||||||||||| || || ||||| || || ||||||||||| ||| ||| | | |||||| | |||| ||| ||||||||||||||||| || |
|
|
| T |
8537784 |
tgcactttgggaatcctagaagagccaccaactagtacaacatcatccatactactactgtccatcttagcatcattaaaacaactcttaacagttttca |
8537883 |
T |
|
| Q |
182 |
tacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaa |
240 |
Q |
| |
|
|||||| | || |||||||| || | || |||||||||||| ||||| || |||||| |
|
|
| T |
8537884 |
tacacttttcaaagaggtccatgttgagttgctcaaacttggcccgagtgattgatgaa |
8537942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 8609605 - 8609711
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
|||||||||||||| ||| | ||||||||||| | || ||||||||||||| ||| | | |||||| |||||||| || ||||| || |||||||||| |
|
|
| T |
8609605 |
tcatcagggttgatgctcatacacaaatcctttccattgaaaaagtcttgcagtagctgcttcactttcggaatcctagaagaacctccaacaagaacaa |
8609704 |
T |
|
| Q |
122 |
catcatc |
128 |
Q |
| |
|
||||||| |
|
|
| T |
8609705 |
catcatc |
8609711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 277
Target Start/End: Original strand, 8569999 - 8570254
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
||||||||||| || || ||||| || ||||||| || ||||| ||||| ||||| | |||||| |||||||| || |||||||| ||||| |||| |
|
|
| T |
8569999 |
tcatcagggttaatgctgttgcataattccttcccctggaaaaactcttgtaatagctgcctcactttaggaatcctagaagaaccaccaacaaggacaa |
8570098 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
||||||| | | | || |||||| | |||| ||||||||| ||||||||||||||||||| | || |||| |||||| |||||||||||||| |
|
|
| T |
8570099 |
catcatctacactattcttttccatcttagcatcagcaagacaactattaacagtttccatacacttttcaaagaggttcatattcatttcctcaaactt |
8570198 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaa |
277 |
Q |
| |
|
||| || || || |||||| ||||| ||||||| | ||| || ||||| ||||| |
|
|
| T |
8570199 |
ggcccgggttattgatgaactgaagtcaattcccttatatatagcatctagctcaa |
8570254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 29578149 - 29578053
Alignment:
| Q |
25 |
tcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
|||||||| || ||| ||||||||||| | | ||| ||||||||||||||||| | ||||||||||||| || |||||||| || ||||| |||| |
|
|
| T |
29578149 |
tcagggtttatgctcatgcacaaatccctacccttgaaaaagtcttgcaatagtttccgcactttgggaattctagatgaacctccaacaaggacaa |
29578053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 8102397 - 8102460
Alignment:
| Q |
64 |
aagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
127 |
Q |
| |
|
||||||||||| || | || |||||||||||||| | ||||||||| |||||||||||||||| |
|
|
| T |
8102397 |
aagtcttgcaacagttgctgaactttgggaatcctagttgaaccaccaacaagaacaacatcat |
8102460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 8576014 - 8576120
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
|||||||||||||| ||||| || || ||||||| ||| |||| || || ||||| | | |||||| |||||||| || |||||||| ||||| |||| |
|
|
| T |
8576014 |
tcatcagggttgatgctcttacataattccttccccttgaaaacctcctgtaatagctgtctcactttaggaatcctagaagaaccaccaacaaggacaa |
8576113 |
T |
|
| Q |
122 |
catcatc |
128 |
Q |
| |
|
||||||| |
|
|
| T |
8576114 |
catcatc |
8576120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 8664919 - 8664971
Alignment:
| Q |
193 |
aaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaa |
245 |
Q |
| |
|
|||||||||||||| |||||||||||| | |||||||| || |||||| |||| |
|
|
| T |
8664919 |
aaaaggtccatattgatttcctcaaacctcgcacgagttattgatgaacaaaa |
8664971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 22 - 358
Target Start/End: Complemental strand, 9336371 - 9336035
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
||||| |||||||||| | || | || ||||||| ||| ||||| ||| ||||||| ||||||||||| |||||||| || || |||||||||||||||| |
|
|
| T |
9336371 |
tcatctgggttgatacccatgaataattccttccccttgaaaaattctagcaatagttcttgcactttcggaatcctagacgagccacccacaagaacaa |
9336272 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
||||||||||| |||| | ||||||||||| || ||||| | | |||| | | ||||||||| ||||||| |||||| |||| ||||||||| || |
|
|
| T |
9336271 |
tatcatcaatattactcttgtatatctttgaatccctgagacaggtgtcaacaatattcatacactcattgaaaaagtccatgttaagttcctcaaattt |
9336172 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
321 |
Q |
| |
|
||||||||| || |||||||||||||| |||||| |||||||| |||||||||||||||||| ||||| || ||||| ||| |||| ||||||||||| |
|
|
| T |
9336171 |
ggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctca |
9336072 |
T |
|
| Q |
322 |
caggcagttctcaacctccataagggttttgcgttct |
358 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| ||||| |
|
|
| T |
9336071 |
caggcagttctcaacctccttaaggattttgggttct |
9336035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 22 - 336
Target Start/End: Original strand, 30774940 - 30775254
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||| || || || | ||||||| || ||||||||||||||||| || |||||||| |||||||||| |
|
|
| T |
30774940 |
tcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaa |
30775039 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
|||||| | | |||| | | |||||||||| |||||||||||| |||||| | |||||||| || |||||||||||||| |||||||||||||| |
|
|
| T |
30775040 |
tatcatctacactactcttgtctacctttgaatcagtaagacaactctcaacagtctgtatacactcattaaaaaggtccatattgatttcctcaaactt |
30775139 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
321 |
Q |
| |
|
| ||||||| || |||||||||||||| || | ||||||||| ||||| ||||||| |||| ||| ||| ||||||||||| |||||| | || |
|
|
| T |
30775140 |
gacacgagtgattgatgaagaaaagtcaatgtcttgaaataaattatctatctcaacaaatgtgagaaacttgaaggagagtgtcctttttgccttttca |
30775239 |
T |
|
| Q |
322 |
caggcagttctcaac |
336 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
30775240 |
catgcagttctcaac |
30775254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 35132144 - 35132458
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
||||| ||||| || ||||||||||| ||||||| || ||||||| ||||||||| | ||||||||||||||||| || || || || |||||||||| |
|
|
| T |
35132144 |
tcatcggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagctgctgcactttgggaatcctagaagaccctccaacaagaacaa |
35132243 |
T |
|
| Q |
122 |
catcatc-aatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaact |
220 |
Q |
| |
|
||||||| | | ||| | |||||| | |||| | |||||||||| || || | ||||||||| || |||||||| ||| ||||||||||||| |
|
|
| T |
35132244 |
catcatctacccttgctcttgtccatcttagcatcaatgagacaactctctacggtattcatacactcattaaaaaggtctgcattcatttcctcaaact |
35132343 |
T |
|
| Q |
221 |
tggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctc |
320 |
Q |
| |
|
|||| ||| | || ||||||||||| || || || ||||||||||||||||| |||| | ||| |||| |||||| |||| ||||||||||||| |
|
|
| T |
35132344 |
tggcgcgattgattgatgaagaaaaatcaatgccttgaaataaagaatctacttcaatattggcaacaacaaggaaagaaagtgatctctttgccctcta |
35132443 |
T |
|
| Q |
321 |
gcaggcagttctcaa |
335 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
35132444 |
gcaggcagttctcaa |
35132458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 340
Target Start/End: Original strand, 43744504 - 43744822
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
||||||||||| || |||| ||||||||||||| |||||| || |||||||| | ||| ||||| |||||||| || || ||||| |||||||||| |
|
|
| T |
43744504 |
tcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaa |
43744603 |
T |
|
| Q |
122 |
catcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaactt |
221 |
Q |
| |
|
|||||| ||| | ||| | |||||| | |||| |||||||||||| |||| ||| || |||||||||||| || |||||||| |||||||||||||| |
|
|
| T |
43744604 |
catcatgtatagcgctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaactt |
43744703 |
T |
|
| Q |
222 |
ggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcg |
321 |
Q |
| |
|
| |||||| || | || | | || || || |||| |||||||||||||||||||| ||||||||||| || ||||| | |||||| ||||| || ||| |
|
|
| T |
43744704 |
agtacgagtgattgttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcctttttgctctttcg |
43744803 |
T |
|
| Q |
322 |
caggcagttctcaacctcc |
340 |
Q |
| |
|
|| || ||||||||||||| |
|
|
| T |
43744804 |
catgctgttctcaacctcc |
43744822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 12528192 - 12528298
Alignment:
| Q |
22 |
tcatcagggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaa |
121 |
Q |
| |
|
|||||||||||||| |||||| | || ||||| | ||| ||||| || |||||||| | | ||||||||||||||| || || ||||| ||||| |||| |
|
|
| T |
12528192 |
tcatcagggttgatgctcttgtataactccttgcccttgaaaaactcctgcaatagctgcttcactttgggaatcctagacgagccaccaacaagtacaa |
12528291 |
T |
|
| Q |
122 |
catcatc |
128 |
Q |
| |
|
|||||| |
|
|
| T |
12528292 |
tatcatc |
12528298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 346
Target Start/End: Original strand, 28219744 - 28219930
Alignment:
| Q |
160 |
agacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaa |
259 |
Q |
| |
|
||||| |||| |||||||| || |||||| |||||||| |||||||| |||||||||||||| ||||||||||| |||||| | || || || || | || |
|
|
| T |
28219744 |
agacacctctcaacagttttcaaacactcattgaaaagatccatattgatttcctcaaacttagcacgagtaattgatgaaaagaaatcaatgccttcaa |
28219843 |
T |
|
| Q |
260 |
ataaagaatctacctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccataagg |
346 |
Q |
| |
|
|||||||||||||||||| |||| ||||| || ||||| |||||||| ||||| |||| ||| || ||||||||||||| ||||| |
|
|
| T |
28219844 |
ataaagaatctacctcaatggtggcgacaacagcaaaagatagtgtcctttttgctctcttgcacgctgttctcaacctccttaagg |
28219930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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