View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5654_1D_low_1 (Length: 885)

Name: NF5654_1D_low_1
Description: NF5654_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5654_1D_low_1
NF5654_1D_low_1
[»] chr7 (91 HSPs)
chr7 (22-563)||(22695984-22696521)
chr7 (23-185)||(22684687-22684851)
chr7 (366-563)||(28646976-28647169)
chr7 (361-563)||(21574103-21574302)
chr7 (361-563)||(2751273-2751471)
chr7 (361-563)||(22119890-22120088)
chr7 (361-563)||(40542911-40543109)
chr7 (361-563)||(23330740-23330938)
chr7 (361-563)||(7275279-7275477)
chr7 (355-563)||(17196951-17197155)
chr7 (368-563)||(11997858-11998049)
chr7 (361-563)||(2344301-2344499)
chr7 (361-563)||(7175863-7176061)
chr7 (367-563)||(21835159-21835351)
chr7 (361-470)||(12211625-12211734)
chr7 (353-563)||(27312146-27312352)
chr7 (356-563)||(18044104-18044307)
chr7 (361-563)||(2103057-2103253)
chr7 (376-563)||(7262234-7262415)
chr7 (361-563)||(21217834-21218032)
chr7 (403-563)||(654706-654861)
chr7 (368-563)||(42913514-42913705)
chr7 (370-554)||(47541395-47541574)
chr7 (361-482)||(8435773-8435894)
chr7 (243-343)||(19835384-19835484)
chr7 (356-563)||(10091185-10091387)
chr7 (229-343)||(13726430-13726541)
chr7 (376-563)||(22703503-22703686)
chr7 (357-482)||(1469110-1469235)
chr7 (361-563)||(9769588-9769784)
chr7 (357-472)||(13332510-13332626)
chr7 (738-790)||(22696646-22696698)
chr7 (367-563)||(23012509-23012701)
chr7 (356-563)||(27009356-27009560)
chr7 (381-563)||(31273936-31274113)
chr7 (361-471)||(36173037-36173147)
chr7 (376-552)||(37056231-37056394)
chr7 (373-450)||(22299863-22299940)
chr7 (414-563)||(29861725-29861870)
chr7 (186-339)||(48826231-48826384)
chr7 (361-557)||(17212055-17212247)
chr7 (361-448)||(7799944-7800031)
chr7 (280-343)||(19423924-19423986)
chr7 (361-563)||(28089818-28090019)
chr7 (366-563)||(47380905-47381090)
chr7 (481-563)||(3851875-3851957)
chr7 (358-463)||(3950885-3950991)
chr7 (369-450)||(42814874-42814955)
chr7 (410-559)||(1766149-1766293)
chr7 (244-343)||(24375578-24375676)
chr7 (252-358)||(22023758-22023864)
chr7 (481-563)||(22638406-22638488)
chr7 (361-563)||(31197593-31197790)
chr7 (501-563)||(31712903-31712965)
chr7 (358-414)||(3951136-3951193)
chr7 (430-563)||(23092167-23092296)
chr7 (361-410)||(23854398-23854447)
chr7 (361-410)||(32849593-32849642)
chr7 (280-340)||(24237134-24237194)
chr7 (361-445)||(31713010-31713094)
chr7 (368-563)||(39145653-39145844)
chr7 (375-470)||(31481063-31481158)
chr7 (368-450)||(9683835-9683917)
chr7 (497-563)||(16374128-16374194)
chr7 (361-563)||(19421233-19421431)
chr7 (226-319)||(46660827-46660921)
chr7 (348-417)||(577668-577737)
chr7 (368-449)||(9718098-9718179)
chr7 (490-563)||(11909955-11910028)
chr7 (498-563)||(17279666-17279731)
chr7 (361-450)||(22638294-22638383)
chr7 (367-417)||(25956307-25956359)
chr7 (382-430)||(674557-674605)
chr7 (367-447)||(4566412-4566495)
chr7 (374-414)||(24686127-24686167)
chr7 (367-447)||(26459394-26459477)
chr7 (361-472)||(43785386-43785498)
chr7 (497-556)||(8943409-8943468)
chr7 (381-447)||(29385727-29385794)
chr7 (379-563)||(35476362-35476541)
chr7 (383-417)||(23637030-23637064)
chr7 (497-563)||(25333537-25333602)
chr7 (382-447)||(25655212-25655278)
chr7 (360-410)||(28003837-28003887)
chr7 (367-433)||(33696179-33696245)
chr7 (481-563)||(36772304-36772386)
chr7 (355-401)||(38864605-38864651)
chr7 (481-563)||(41907515-41907596)
chr7 (381-431)||(46279039-46279089)
chr7 (361-406)||(25333421-25333466)
chr7 (386-434)||(44628180-44628229)
[»] chr2 (74 HSPs)
chr2 (361-563)||(8192353-8192550)
chr2 (361-563)||(15037957-15038155)
chr2 (361-563)||(44946054-44946252)
chr2 (355-563)||(11941211-11941415)
chr2 (366-482)||(4618763-4618879)
chr2 (361-563)||(33827574-33827772)
chr2 (350-563)||(28194139-28194344)
chr2 (484-563)||(14486942-14487021)
chr2 (356-563)||(30466831-30467034)
chr2 (224-342)||(29264414-29264532)
chr2 (380-563)||(29698164-29698342)
chr2 (361-563)||(19054023-19054222)
chr2 (367-563)||(19605847-19606038)
chr2 (357-563)||(17324760-17324960)
chr2 (366-563)||(41329846-41330038)
chr2 (356-448)||(4852551-4852643)
chr2 (369-447)||(3405265-3405343)
chr2 (368-450)||(25293171-25293253)
chr2 (436-563)||(28668946-28669069)
chr2 (360-521)||(44976196-44976354)
chr2 (361-450)||(32845089-32845178)
chr2 (394-563)||(35171831-35171996)
chr2 (356-563)||(24195997-24196198)
chr2 (380-559)||(5394034-5394209)
chr2 (361-440)||(27269470-27269549)
chr2 (368-470)||(40591188-40591290)
chr2 (376-472)||(10582077-10582174)
chr2 (498-559)||(18976460-18976521)
chr2 (367-480)||(26176277-26176389)
chr2 (282-358)||(36421951-36422028)
chr2 (376-476)||(18708490-18708590)
chr2 (373-472)||(27290598-27290698)
chr2 (367-447)||(34041572-34041655)
chr2 (369-448)||(14946785-14946864)
chr2 (427-559)||(19174827-19174954)
chr2 (355-434)||(32526211-32526290)
chr2 (361-563)||(36390570-36390765)
chr2 (497-563)||(2140487-2140553)
chr2 (280-353)||(7893242-7893318)
chr2 (395-555)||(8024679-8024835)
chr2 (497-563)||(18692090-18692156)
chr2 (361-455)||(18976531-18976624)
chr2 (401-475)||(30943134-30943208)
chr2 (497-563)||(44929847-44929913)
chr2 (369-563)||(12543150-12543339)
chr2 (495-563)||(31778159-31778227)
chr2 (495-563)||(34516415-34516483)
chr2 (350-450)||(41313979-41314079)
chr2 (355-417)||(20297555-20297618)
chr2 (481-563)||(25293272-25293355)
chr2 (496-563)||(43374331-43374398)
chr2 (380-466)||(19525490-19525576)
chr2 (387-433)||(43963987-43964033)
chr2 (282-340)||(45709798-45709856)
chr2 (361-472)||(4567524-4567636)
chr2 (369-418)||(6007031-6007080)
chr2 (387-432)||(7250260-7250305)
chr2 (357-434)||(18691976-18692053)
chr2 (381-430)||(18825366-18825415)
chr2 (380-557)||(36242319-36242492)
chr2 (499-563)||(27269345-27269409)
chr2 (495-563)||(44610167-44610235)
chr2 (380-431)||(6099519-6099570)
chr2 (186-309)||(33803351-33803474)
chr2 (186-309)||(33807833-33807956)
chr2 (500-563)||(39957891-39957954)
chr2 (375-410)||(40997500-40997535)
chr2 (380-450)||(43374435-43374505)
chr2 (481-563)||(3943854-3943936)
chr2 (292-358)||(17315955-17316021)
chr2 (382-434)||(10449048-10449101)
chr2 (534-563)||(31175720-31175749)
chr2 (380-417)||(38341754-38341791)
chr2 (380-472)||(45271401-45271494)
[»] chr5 (71 HSPs)
chr5 (361-563)||(19145413-19145610)
chr5 (386-563)||(36895448-36895621)
chr5 (356-563)||(32059441-32059644)
chr5 (361-563)||(8484662-8484860)
chr5 (355-563)||(27498732-27498936)
chr5 (367-563)||(31287947-31288139)
chr5 (361-563)||(4603775-4603973)
chr5 (355-563)||(11926502-11926707)
chr5 (366-559)||(38684211-38684399)
chr5 (356-563)||(15641107-15641309)
chr5 (367-563)||(33709504-33709694)
chr5 (194-358)||(30874529-30874694)
chr5 (387-563)||(18207231-18207403)
chr5 (361-563)||(30485826-30486024)
chr5 (361-563)||(34310140-34310338)
chr5 (366-563)||(10869566-10869759)
chr5 (361-563)||(23270523-23270721)
chr5 (361-563)||(27487555-27487754)
chr5 (380-563)||(12398449-12398628)
chr5 (380-563)||(19456212-19456389)
chr5 (361-563)||(930487-930684)
chr5 (361-482)||(36954816-36954937)
chr5 (375-476)||(14302783-14302884)
chr5 (361-472)||(25586930-25587042)
chr5 (361-563)||(7085627-7085825)
chr5 (356-556)||(13038463-13038658)
chr5 (356-556)||(13108458-13108653)
chr5 (481-559)||(35425127-35425205)
chr5 (490-563)||(22693058-22693131)
chr5 (356-433)||(33025473-33025550)
chr5 (361-450)||(25750719-25750810)
chr5 (361-449)||(38631072-38631160)
chr5 (356-430)||(25343232-25343306)
chr5 (494-563)||(38630980-38631049)
chr5 (368-449)||(40330638-40330719)
chr5 (367-563)||(6014281-6014473)
chr5 (367-559)||(11464913-11465100)
chr5 (499-563)||(37495186-37495250)
chr5 (500-563)||(41351105-41351168)
chr5 (369-555)||(42193491-42193671)
chr5 (368-430)||(8780483-8780545)
chr5 (361-470)||(15931057-15931166)
chr5 (481-559)||(24158171-24158249)
chr5 (361-450)||(12317260-12317349)
chr5 (361-433)||(15485418-15485491)
chr5 (361-410)||(22392699-22392748)
chr5 (354-450)||(1827640-1827736)
chr5 (282-344)||(37325795-37325854)
chr5 (229-340)||(1374736-1374847)
chr5 (280-343)||(2327476-2327539)
chr5 (481-563)||(22392802-22392884)
chr5 (490-563)||(21236363-21236436)
chr5 (366-447)||(37397716-37397797)
chr5 (374-447)||(37495058-37495131)
chr5 (282-358)||(1375054-1375130)
chr5 (366-410)||(3715059-3715103)
chr5 (381-417)||(5943896-5943932)
chr5 (369-449)||(10399779-10399859)
chr5 (499-563)||(25548535-25548599)
chr5 (367-410)||(15971272-15971315)
chr5 (354-417)||(21042668-21042731)
chr5 (369-415)||(204169-204215)
chr5 (376-434)||(9585639-9585697)
chr5 (497-559)||(13659250-13659312)
chr5 (386-447)||(37258350-37258412)
chr5 (357-407)||(42006787-42006837)
chr5 (366-431)||(2499307-2499372)
chr5 (369-410)||(5067307-5067348)
chr5 (483-563)||(21377250-21377330)
chr5 (361-410)||(34049820-34049869)
chr5 (184-241)||(37325872-37325929)
[»] chr3 (80 HSPs)
chr3 (361-556)||(4252404-4252595)
chr3 (361-563)||(48977386-48977584)
chr3 (361-563)||(40133450-40133648)
chr3 (356-559)||(26158811-26159003)
chr3 (367-563)||(32151428-32151620)
chr3 (355-563)||(35492903-35493107)
chr3 (361-563)||(18176888-18177086)
chr3 (361-563)||(25289716-25289913)
chr3 (361-559)||(30257622-30257816)
chr3 (354-563)||(21362934-21363139)
chr3 (361-563)||(53424178-53424375)
chr3 (356-563)||(46576341-46576544)
chr3 (361-563)||(8456151-8456349)
chr3 (356-563)||(30807154-30807357)
chr3 (355-563)||(49258263-49258467)
chr3 (369-563)||(52821637-52821826)
chr3 (366-563)||(25379764-25379957)
chr3 (374-563)||(50731238-50731419)
chr3 (374-563)||(50781435-50781616)
chr3 (367-563)||(15566501-15566692)
chr3 (368-556)||(55371302-55371477)
chr3 (369-563)||(26174119-26174309)
chr3 (361-563)||(45529756-45529953)
chr3 (351-563)||(40940813-40941021)
chr3 (380-563)||(10190743-10190922)
chr3 (356-563)||(45272417-45272620)
chr3 (361-563)||(34492576-34492774)
chr3 (386-563)||(39041853-39042026)
chr3 (380-563)||(10083820-10083999)
chr3 (361-563)||(31537839-31538037)
chr3 (375-563)||(53233912-53234095)
chr3 (361-541)||(50582990-50583165)
chr3 (361-563)||(25344059-25344256)
chr3 (370-520)||(26108299-26108445)
chr3 (361-450)||(7485635-7485724)
chr3 (462-559)||(30695251-30695347)
chr3 (280-352)||(31203671-31203743)
chr3 (481-563)||(8097280-8097362)
chr3 (490-559)||(33398473-33398542)
chr3 (381-547)||(34844396-34844557)
chr3 (281-358)||(30484860-30484938)
chr3 (361-447)||(52455762-52455848)
chr3 (497-563)||(53848435-53848501)
chr3 (361-450)||(7470325-7470414)
chr3 (374-479)||(51390920-51391025)
chr3 (352-406)||(4462622-4462676)
chr3 (501-563)||(24407395-24407457)
chr3 (357-450)||(6041782-6041875)
chr3 (498-563)||(24165716-24165781)
chr3 (370-466)||(26535045-26535139)
chr3 (367-447)||(46518637-46518720)
chr3 (366-472)||(11390605-11390712)
chr3 (395-450)||(40777052-40777107)
chr3 (382-417)||(42430360-42430395)
chr3 (361-447)||(55287801-55287887)
chr3 (368-430)||(42963531-42963593)
chr3 (377-447)||(50162057-50162127)
chr3 (369-482)||(53288790-53288903)
chr3 (459-563)||(54475778-54475877)
chr3 (494-563)||(7485532-7485600)
chr3 (367-539)||(29915295-29915462)
chr3 (367-539)||(29964448-29964615)
chr3 (495-563)||(8958036-8958104)
chr3 (367-447)||(30311315-30311398)
chr3 (398-523)||(31766726-31766847)
chr3 (515-563)||(32094758-32094806)
chr3 (361-417)||(36660768-36660824)
chr3 (495-563)||(48105005-48105073)
chr3 (381-449)||(53863850-53863918)
chr3 (368-445)||(39253708-39253787)
chr3 (366-425)||(50195414-50195473)
chr3 (386-447)||(28703388-28703450)
chr3 (381-431)||(35623267-35623317)
chr3 (494-563)||(1692960-1693029)
chr3 (502-563)||(4048085-4048146)
chr3 (355-396)||(24703696-24703737)
chr3 (498-563)||(25017620-25017684)
chr3 (357-414)||(27887422-27887479)
chr3 (367-417)||(42799762-42799814)
chr3 (490-563)||(52455650-52455723)
[»] chr1 (81 HSPs)
chr1 (361-563)||(32729543-32729740)
chr1 (351-563)||(4621238-4621446)
chr1 (355-559)||(24674385-24674585)
chr1 (361-563)||(1486418-1486616)
chr1 (356-563)||(24122016-24122219)
chr1 (361-563)||(46607808-46608006)
chr1 (361-563)||(15059403-15059601)
chr1 (351-563)||(34778330-34778535)
chr1 (353-563)||(7766728-7766934)
chr1 (361-563)||(7197248-7197445)
chr1 (361-563)||(30677174-30677372)
chr1 (371-563)||(17935777-17935965)
chr1 (387-559)||(16539632-16539799)
chr1 (361-476)||(24216976-24217091)
chr1 (369-556)||(25236997-25237180)
chr1 (355-476)||(1138571-1138692)
chr1 (361-551)||(16899509-16899687)
chr1 (191-339)||(50741414-50741562)
chr1 (355-562)||(8077639-8077841)
chr1 (378-563)||(37351454-37351643)
chr1 (375-563)||(9926147-9926333)
chr1 (282-358)||(33858148-33858224)
chr1 (282-358)||(33922699-33922775)
chr1 (229-339)||(36497089-36497199)
chr1 (480-563)||(35138102-35138184)
chr1 (373-563)||(7578419-7578605)
chr1 (243-348)||(19636099-19636204)
chr1 (355-563)||(27454865-27455071)
chr1 (355-563)||(40802070-40802272)
chr1 (367-450)||(39964514-39964599)
chr1 (368-560)||(1378903-1379090)
chr1 (361-449)||(2272342-2272430)
chr1 (360-476)||(17447271-17447387)
chr1 (361-472)||(23232352-23232464)
chr1 (357-555)||(1095013-1095198)
chr1 (377-476)||(19034470-19034569)
chr1 (387-563)||(36155889-36156061)
chr1 (381-476)||(37047010-37047105)
chr1 (367-431)||(39714779-39714845)
chr1 (357-431)||(26608176-26608249)
chr1 (352-543)||(29057359-29057545)
chr1 (356-563)||(31162743-31162946)
chr1 (356-476)||(2782984-2783102)
chr1 (361-450)||(20487300-20487389)
chr1 (369-450)||(25496598-25496679)
chr1 (354-450)||(7946835-7946931)
chr1 (366-450)||(46113512-46113596)
chr1 (361-563)||(52135128-52135322)
chr1 (356-450)||(2537697-2537785)
chr1 (369-447)||(8177166-8177247)
chr1 (481-563)||(8254753-8254835)
chr1 (381-447)||(19480552-19480618)
chr1 (369-450)||(168207-168288)
chr1 (357-450)||(1378739-1378832)
chr1 (373-482)||(10059065-10059174)
chr1 (379-476)||(20907345-20907442)
chr1 (313-358)||(33185030-33185075)
chr1 (368-450)||(39012301-39012385)
chr1 (381-450)||(45859153-45859222)
chr1 (495-563)||(23041650-23041718)
chr1 (367-466)||(809226-809325)
chr1 (496-563)||(22910000-22910067)
chr1 (368-449)||(21726734-21726815)
chr1 (356-413)||(37349516-37349573)
chr1 (367-447)||(8904423-8904506)
chr1 (495-563)||(26513149-26513217)
chr1 (495-563)||(27159213-27159281)
chr1 (186-339)||(32226035-32226179)
chr1 (367-447)||(33700757-33700840)
chr1 (354-449)||(18533835-18533930)
chr1 (368-447)||(34965334-34965413)
chr1 (380-431)||(38939226-38939277)
chr1 (381-448)||(41470594-41470661)
chr1 (299-358)||(44288030-44288089)
chr1 (386-433)||(44417460-44417507)
chr1 (361-408)||(47091688-47091735)
chr1 (496-563)||(48699888-48699955)
chr1 (367-409)||(6776148-6776190)
chr1 (367-446)||(49101754-49101835)
chr1 (361-410)||(14258577-14258626)
chr1 (530-563)||(24217139-24217172)
[»] scaffold0576 (1 HSPs)
scaffold0576 (361-563)||(5083-5281)
[»] chr6 (45 HSPs)
chr6 (361-563)||(15360099-15360297)
chr6 (387-562)||(17149458-17149629)
chr6 (361-563)||(9238973-9239171)
chr6 (366-562)||(10377718-10377911)
chr6 (355-563)||(34147338-34147542)
chr6 (355-563)||(34159954-34160158)
chr6 (361-563)||(654147-654345)
chr6 (356-523)||(9208245-9208408)
chr6 (366-563)||(11448874-11449067)
chr6 (361-563)||(21982322-21982519)
chr6 (355-563)||(3222637-3222839)
chr6 (356-563)||(28672060-28672263)
chr6 (361-463)||(8479310-8479412)
chr6 (182-356)||(15584523-15584697)
chr6 (356-563)||(33499467-33499671)
chr6 (375-563)||(17081055-17081239)
chr6 (375-555)||(3907553-3907727)
chr6 (361-472)||(12591635-12591747)
chr6 (356-563)||(21148512-21148714)
chr6 (380-556)||(28741849-28742021)
chr6 (369-563)||(5360072-5360262)
chr6 (498-563)||(14504083-14504148)
chr6 (361-563)||(1344935-1345131)
chr6 (361-563)||(9843936-9844134)
chr6 (436-563)||(17225740-17225862)
chr6 (356-446)||(22576060-22576150)
chr6 (361-476)||(17420863-17420979)
chr6 (356-563)||(11007158-11007361)
chr6 (280-343)||(31462448-31462511)
chr6 (481-563)||(9690639-9690721)
chr6 (381-482)||(6383953-6384053)
chr6 (361-450)||(13753238-13753327)
chr6 (498-563)||(14213013-14213078)
chr6 (367-447)||(12188287-12188370)
chr6 (356-447)||(14212885-14212976)
chr6 (367-450)||(6691532-6691617)
chr6 (378-455)||(17706412-17706489)
chr6 (367-407)||(6164325-6164365)
chr6 (398-450)||(9583408-9583460)
chr6 (186-241)||(2252008-2252063)
chr6 (381-431)||(9862166-9862216)
chr6 (395-448)||(10007212-10007265)
chr6 (381-450)||(21182344-21182413)
chr6 (367-449)||(28028539-28028623)
chr6 (368-433)||(30345214-30345279)
[»] chr4 (79 HSPs)
chr4 (361-563)||(40058853-40059051)
chr4 (361-563)||(52983617-52983815)
chr4 (361-563)||(25852212-25852411)
chr4 (361-563)||(34844759-34844957)
chr4 (361-563)||(54127343-54127541)
chr4 (366-563)||(27528796-27528989)
chr4 (361-563)||(32986195-32986393)
chr4 (366-563)||(9646217-9646410)
chr4 (355-563)||(19660533-19660737)
chr4 (367-563)||(33696280-33696472)
chr4 (356-476)||(41621680-41621800)
chr4 (361-563)||(46714390-46714589)
chr4 (361-563)||(20566347-20566546)
chr4 (357-563)||(45787705-45787906)
chr4 (357-559)||(51535607-51535813)
chr4 (381-562)||(20077986-20078163)
chr4 (361-563)||(5609203-5609401)
chr4 (373-563)||(12710189-12710373)
chr4 (366-563)||(44343516-44343710)
chr4 (229-339)||(54857076-54857186)
chr4 (223-358)||(8368023-8368160)
chr4 (377-563)||(7093390-7093567)
chr4 (366-563)||(25969504-25969697)
chr4 (279-355)||(34559376-34559452)
chr4 (427-563)||(34723863-34723995)
chr4 (359-450)||(34835525-34835616)
chr4 (351-434)||(42245734-42245817)
chr4 (380-482)||(7392042-7392143)
chr4 (361-450)||(13873405-13873494)
chr4 (191-343)||(12049871-12050023)
chr4 (368-448)||(19220538-19220618)
chr4 (360-476)||(41085023-41085139)
chr4 (280-343)||(3125230-3125293)
chr4 (244-343)||(51850415-51850514)
chr4 (485-563)||(13017831-13017908)
chr4 (481-563)||(22488029-22488111)
chr4 (361-431)||(40252296-40252366)
chr4 (368-472)||(22625157-22625262)
chr4 (502-563)||(52494623-52494684)
chr4 (361-449)||(1985834-1985922)
chr4 (366-434)||(31334547-31334615)
chr4 (361-472)||(35674828-35674940)
chr4 (355-563)||(36131511-36131715)
chr4 (367-559)||(35229172-35229360)
chr4 (370-450)||(2351020-2351100)
chr4 (503-563)||(28791250-28791310)
chr4 (427-563)||(32990499-32990631)
chr4 (374-450)||(40307553-40307628)
chr4 (496-559)||(43719092-43719155)
chr4 (386-447)||(4249207-4249269)
chr4 (369-415)||(10125788-10125834)
chr4 (368-450)||(13550213-13550295)
chr4 (361-559)||(13771487-13771682)
chr4 (501-563)||(23639758-23639820)
chr4 (501-563)||(23645416-23645478)
chr4 (367-513)||(33992630-33992772)
chr4 (386-447)||(38869798-38869860)
chr4 (387-448)||(12500170-12500231)
chr4 (368-449)||(13584365-13584446)
chr4 (293-358)||(19238211-19238276)
chr4 (367-431)||(25434659-25434724)
chr4 (368-449)||(42508493-42508574)
chr4 (503-563)||(23131437-23131497)
chr4 (366-410)||(34722173-34722217)
chr4 (367-447)||(37109335-37109418)
chr4 (386-430)||(38206127-38206171)
chr4 (282-358)||(54857392-54857468)
chr4 (370-410)||(55961892-55961932)
chr4 (367-431)||(29195104-29195170)
chr4 (366-472)||(32942373-32942480)
chr4 (367-431)||(37980148-37980214)
chr4 (360-470)||(43719154-43719265)
chr4 (381-444)||(56409976-56410039)
chr4 (497-563)||(9978510-9978576)
chr4 (370-404)||(17415688-17415722)
chr4 (401-479)||(38740888-38740966)
chr4 (186-340)||(49600380-49600533)
chr4 (292-358)||(49600643-49600709)
chr4 (377-450)||(49287872-49287945)
[»] chr8 (68 HSPs)
chr8 (356-563)||(4718642-4718845)
chr8 (361-563)||(3734624-3734822)
chr8 (361-563)||(34237656-34237854)
chr8 (379-563)||(18128533-18128713)
chr8 (356-563)||(20305905-20306108)
chr8 (356-563)||(21092538-21092741)
chr8 (370-563)||(21603241-21603430)
chr8 (361-563)||(19471611-19471810)
chr8 (361-563)||(19542535-19542734)
chr8 (361-563)||(19589962-19590161)
chr8 (361-563)||(39349258-39349456)
chr8 (366-563)||(28193481-28193674)
chr8 (361-563)||(34639209-34639405)
chr8 (366-482)||(41070768-41070884)
chr8 (356-563)||(42643119-42643322)
chr8 (361-563)||(34694576-34694775)
chr8 (361-563)||(42328007-42328204)
chr8 (361-563)||(2618188-2618386)
chr8 (361-563)||(15259407-15259605)
chr8 (380-557)||(13749077-13749250)
chr8 (361-563)||(32879281-32879479)
chr8 (367-472)||(26168936-26169041)
chr8 (361-472)||(27746422-27746534)
chr8 (361-563)||(28964035-28964232)
chr8 (368-563)||(22200561-22200751)
chr8 (369-482)||(21239359-21239472)
chr8 (244-336)||(27707900-27707993)
chr8 (361-469)||(8387535-8387643)
chr8 (291-358)||(5124539-5124606)
chr8 (481-563)||(2639412-2639494)
chr8 (481-563)||(33747000-33747082)
chr8 (368-473)||(3794800-3794905)
chr8 (386-563)||(8765527-8765700)
chr8 (368-433)||(15974915-15974979)
chr8 (380-563)||(14632975-14633154)
chr8 (280-343)||(25029648-25029711)
chr8 (360-552)||(28908822-28909012)
chr8 (366-440)||(30911377-30911451)
chr8 (376-563)||(12312863-12313045)
chr8 (361-450)||(36848859-36848948)
chr8 (368-480)||(33585707-33585819)
chr8 (408-563)||(6953009-6953159)
chr8 (369-559)||(264405-264590)
chr8 (369-559)||(651331-651516)
chr8 (369-559)||(837066-837251)
chr8 (368-482)||(3403580-3403694)
chr8 (481-563)||(34610688-34610770)
chr8 (361-410)||(18532109-18532158)
chr8 (369-453)||(11714926-11715010)
chr8 (280-339)||(13341643-13341703)
chr8 (496-563)||(20470050-20470116)
chr8 (404-556)||(36094729-36094877)
chr8 (497-563)||(7557952-7558018)
chr8 (367-430)||(22268935-22269000)
chr8 (366-563)||(24018389-24018583)
chr8 (381-431)||(40136963-40137013)
chr8 (367-563)||(4698724-4698916)
chr8 (376-472)||(9047365-9047462)
chr8 (502-563)||(16990722-16990783)
chr8 (381-470)||(34778760-34778849)
chr8 (366-450)||(28088293-28088377)
chr8 (386-433)||(9126582-9126629)
chr8 (368-415)||(39317029-39317076)
chr8 (517-563)||(5740384-5740430)
chr8 (481-563)||(10292172-10292254)
chr8 (361-410)||(7558093-7558142)
chr8 (361-410)||(8042656-8042705)
chr8 (293-358)||(22893072-22893137)
[»] scaffold0026 (1 HSPs)
scaffold0026 (361-563)||(97367-97565)
[»] scaffold0070 (1 HSPs)
scaffold0070 (361-563)||(40323-40520)
[»] scaffold0051 (1 HSPs)
scaffold0051 (361-563)||(52872-53070)
[»] scaffold0623 (1 HSPs)
scaffold0623 (360-563)||(1058-1256)
[»] scaffold0366 (2 HSPs)
scaffold0366 (360-563)||(9301-9499)
scaffold0366 (360-472)||(12087-12200)
[»] scaffold0217 (1 HSPs)
scaffold0217 (366-563)||(7310-7503)
[»] scaffold0019 (1 HSPs)
scaffold0019 (386-563)||(161832-162005)
[»] scaffold0049 (2 HSPs)
scaffold0049 (481-563)||(66868-66950)
scaffold0049 (361-447)||(66760-66846)
[»] scaffold0252 (1 HSPs)
scaffold0252 (244-332)||(16593-16681)
[»] scaffold0160 (1 HSPs)
scaffold0160 (370-563)||(29144-29332)
[»] scaffold0459 (1 HSPs)
scaffold0459 (360-563)||(10696-10893)
[»] scaffold0068 (1 HSPs)
scaffold0068 (356-563)||(41646-41848)
[»] scaffold1175 (1 HSPs)
scaffold1175 (481-563)||(2427-2509)
[»] scaffold0380 (1 HSPs)
scaffold0380 (244-343)||(10459-10558)
[»] scaffold0199 (2 HSPs)
scaffold0199 (356-450)||(8517-8611)
scaffold0199 (502-563)||(8452-8513)
[»] scaffold0102 (1 HSPs)
scaffold0102 (481-563)||(39206-39288)
[»] scaffold0028 (1 HSPs)
scaffold0028 (361-447)||(27774-27860)
[»] scaffold0460 (1 HSPs)
scaffold0460 (361-450)||(8289-8378)
[»] scaffold0172 (1 HSPs)
scaffold0172 (186-343)||(30641-30798)
[»] scaffold0072 (1 HSPs)
scaffold0072 (244-340)||(6011-6107)
[»] scaffold0328 (2 HSPs)
scaffold0328 (361-450)||(14989-15078)
scaffold0328 (490-563)||(13048-13121)
[»] scaffold1712 (1 HSPs)
scaffold1712 (486-563)||(608-685)
[»] scaffold0157 (1 HSPs)
scaffold0157 (387-448)||(20246-20307)
[»] scaffold0240 (1 HSPs)
scaffold0240 (370-410)||(12904-12944)
[»] scaffold0016 (1 HSPs)
scaffold0016 (495-563)||(32416-32483)
[»] scaffold0012 (1 HSPs)
scaffold0012 (387-430)||(240887-240930)
[»] scaffold0006 (1 HSPs)
scaffold0006 (386-447)||(18329-18391)


Alignment Details
Target: chr7 (Bit Score: 436; Significance: 0; HSPs: 91)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 22 - 563
Target Start/End: Original strand, 22695984 - 22696521
Alignment:
Q  22 gataacatcttagcctaggagaagggacaagttcctctatgcttgatgcaataggcaataatgttaaggcatattttgccagaggagtcacaacctatat 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22695984 gataacatcttagcctaggagaagggacaagttcctctatgcttgatgcaataggcaataatgttaaggcatattttgccagaggagtcacaacctatat 22696083  T
Q  122 ataaaattaaaacacagaaatttgttaaaatttgtcatctatgtgataaaacatgaatttaaagcataatagtcaatcccggataatggtgtgtagcggt 221  Q
     |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  22696084 gtaaaat-aaaacacagaaatttgttaaaatttgtcatctatgtgataaaacatgaatttaaagcataatagtcaatcccgcataattgtgtgtagcggt 22696182  T
Q  222 tgaccctaaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatttgattattttttggacaagttacatgtataatacta 321  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  22696183 cgaccctaaaagtgggatagaaggatagcatatagcggtatgataaataacggccatcgatatttgattattttttggacaagttacatgtataatacta 22696282  T
Q  322 taaagtacaaacaaacttatatttaatataaaattaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttca 421  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  22696283 taaagtacaaacaaacttatatttaatataaaattaactcattaggggttggcctagtggttgatttgggatcttggagtgtgctcctctcaaggtctca 22696382  T
Q  422 agtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttggctggcttagaacgaggcccc--cgcaagtgggcggcgggat 519  Q
     |||||||||||| ||||||||||||||| ||   ||||||||||||||||||||    ||||||||||||||||||||  ||||||| |||||||||||    
T  22696383 ggtttgattccctctggtgccaatttcggtgg-ggactccatacagagctttgct----ctggcttagaacgaggcccccgcgcaagtaggcggcgggat 22696477  T
Q  520 tggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||| |||||| ||||||||||||||||||||||||||||||||    
T  22696478 tggtcctctcggattagtcggtccttggatcggataccgagttt 22696521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 22684687 - 22684851
Alignment:
Q  23 ataacatcttagcctaggagaagggac---aagttcctctatgcttgatgcaataggcaataatgttaaggcatattttgccagaggagtcacaacctat 119  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||    
T  22684687 ataacatcttagcctaggagaagggacgacaagttcctctatgcttgatgcaacaggcaataatattaaggcaaattttgccaaaggagtcacaacctat 22684786  T
Q  120 atataaaattaaaacacagaaatttgttaaaatttgtcatctatgtgataaaacatgaatttaaag 185  Q
    | ||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22684787 aaataaaa-caaaacacagaaatttgttaaaatgtgtcatctatgtgataaaacatgaatttaaag 22684851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 366 - 563
Target Start/End: Original strand, 28646976 - 28647169
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatac 465  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||| ||| |||||||| ||||||||||||||| || ||| || ||||    
T  28646976 ggggttggcctagtgattgacttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccctctggtgccaatttcggtgggcaagtcaatac 28647075  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||| ||||||    |||||||| |||| ||||||| ||||||||||| ||||||||| | |||||||||||| |||||||||||||||| |||||||    
T  28647076 agagttttgct----ctggcttataacggggcccccacaagtgggcggtgggattggttccctcgaattagtctgtccttggatcggatatcgagttt 28647169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 21574302 - 21574103
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgatt-ccctatggtgccaatttcggcggacaact 459  Q
    |||| |||||||||||||||||||  ||||||| |||||||||||||||||||||||  || ||| |||| |||| ||||||||| ||||| || ||| |    
T  21574302 catttggggttggcctagtggttggtttgggattttggagtgtgctcctctcaaggtcacaggttcgattcccctttggtgccaacttcggtgggcaagt 21574203  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||||||     | ||||||||||| ||||||| ||||| ||||| | ||||||| | |||| ||||||||||||||||||||||||||||    
T  21574202 ccatacagagctttgc----ccaggcttagaacggggcccccacaagtaggcggtgagattggtcccctcggattagtcggtccttggatcggataccga 21574107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 2751273 - 2751471
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||  ||||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  2751273 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 2751372  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||| ||||||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  2751373 ccatacagagctt-gct----ctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 2751467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 22119890 - 22120088
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  22119890 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 22119989  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  22119990 ccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 22120084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 40543109 - 40542911
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  40543109 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 40543010  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  40543009 ccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 40542915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 23330938 - 23330740
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| |||||| |||||||||||| |||||||| || |||||||||||||||||||| ||| ||| || |||||  |||||||||||||| || ||| ||    
T  23330938 catttggggttagcctagtggttggcttgggattttagagtgtgctcctctcaaggtctcaggttcgactccctccggtgccaatttcggtgggcaagtc 23330839  T
Q  461 catacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgag 560  Q
    ||||||||||||||||    |||||||| |||| | || ||||||||||||||   ||||||| | ||| ||||||||  ||||||||||||||||||||    
T  23330838 catacagagctttgct----ctggcttaaaacgggacctccgcaagtgggcggtaagattggtcccctcaaattagtcaatccttggatcggataccgag 23330743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 7275279 - 7275477
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  7275279 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 7275378  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||    |||||||  |||  ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  7275379 ccatacagagc-ttgct----ctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 7275473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 355 - 563
Target Start/End: Complemental strand, 17197155 - 17196951
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    ||||| |||| ||||| |||||||||||||  ||| ||||||||||| ||||||||   |||| ||||||| |||||||| ||||||||||||||| |      
T  17197155 ttaacccatttggggtcggcctagtggttggtttgcgatcttggagtttgctcctccataggtctcaagttcgattccctctggtgccaatttcggtgag 17197056  T
Q  455 c-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
    | || |||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | ||||||||||||| | |||||||||||    
T  17197055 ctaagtccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcgga 17196961  T
Q  554 taccgagttt 563  Q
    ||||||||||    
T  17196960 taccgagttt 17196951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 368 - 563
Target Start/End: Original strand, 11997858 - 11998049
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccataca 466  Q
    |||||| |||||||||| |||||||||||||||| |||||||||  |||| ||| ||| |||||||| |||||||||||||||  | | || ||||||||    
T  11997858 ggttgggctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggttggctaagtccataca 11997957  T
Q  467 gagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
     ||||| |||    |||||||  |||  ||||||||||||||||||| ||||||||| | ||||||||||||| | |||||||||||||||||||||    
T  11997958 tagctt-gct----ctggctttaaactgggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttt 11998049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 2344301 - 2344499
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||  ||| | |||  || |||||| | |||||||||||| || || | || |    
T  2344301 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagctctcagattcgattccttctggtgccaattttggtgggctaagt 2344400  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||||  |||   ||||||  |||| | |||||||||||| |||| ||||||||| | |||| ||||||||||||||||||||||||||||    
T  2344401 ccatacagagcttt--ttt---tggctttaaacgggacccccgcaagtgagcggtgggattggtcccctcggattagtcggtccttggatcggataccga 2344495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 7176061 - 7175863
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  7176061 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 7175962  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||    |||||||  |||  | ||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||| ||    
T  7175961 ccatacagagc-ttgct----ctggctttaaacaggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatactga 7175867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 367 - 563
Target Start/End: Original strand, 21835159 - 21835351
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatac 465  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||   || | ||| ||| |||||||| ||||||||||||||| || | || |||||||    
T  21835159 gggttgacctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaatttcggtgggctaagtccatac 21835258  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | ||||||||||||| |||||||    
T  21835259 agagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatatcgagttt 21835351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 361 - 470
Target Start/End: Complemental strand, 12211734 - 12211625
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| | ||| |||||||| ||| ||||||||||||||  |||||| ||    
T  12211734 catttggggttggcctagtggttggcttaggatcttggagtgtgctcctctcaagatctcaggtttgatttcctctggtgccaatttcgatggacaagtc 12211635  T
Q  461 catacagagc 470  Q
    ||||||||||    
T  12211634 catacagagc 12211625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 353 - 563
Target Start/End: Original strand, 27312146 - 27312352
Alignment:
Q  353 aattaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcg 452  Q
    |||||||  ||| ||||||||||||||||||| |||||||||||||||| |||||||||  |||||||| ||| |||||||| | ||||||||||||  |    
T  27312146 aattaacctatttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtttcaggttcgattccctctagtgccaatttcgatg 27312245  T
Q  453 -gacaactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcg 551  Q
     | ||| |||||||||||| |  ||    ||| |||  ||||  |||||||||||||||||| ||||||||| | |||  |||||||| | |||||||||    
T  27312246 tgccaagtccatacagagc-tacct----ctgactttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcg 27312340  T
Q  552 gataccgagttt 563  Q
    ||||||||||||    
T  27312341 gataccgagttt 27312352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 356 - 563
Target Start/End: Original strand, 18044104 - 18044307
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||   ||||  || ||| |||||||| | ||||||||||||| || |    
T  18044104 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccctcttgtgccaatttcggtgggc 18044203  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || |||||||||||||| |||    |||||||  |||| ||||||| |||||||| || || |||||| | |||  |||||||| | ||||||||||||    
T  18044204 taagtccatacagagctt-gct----ctggctttaaacggggcccccacaagtgggtggtggaattggtcccctcagattagtcgattcttggatcggat 18044298  T
Q  555 accgagttt 563  Q
    |||||||||    
T  18044299 accgagttt 18044307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 2103057 - 2103253
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||| ||||||||||| || | || |    
T  2103057 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagt 2103156  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||    |||||||  || | ||||||||||||||||||| ||||||||| | |||| |||||||| | | | |||||||||||||    
T  2103157 ccatacagagc-ttgct----ctggctttaaatggggcccccgcaagtgggcggtgggattggt-ccctcggattagtcgattcat-gatcggataccga 2103249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 376 - 563
Target Start/End: Original strand, 7262234 - 7262415
Alignment:
Q  376 tagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgc 475  Q
    |||||||||||||| ||||||| |||||| |||||||||||| ||||||||||||| | ||| |||||||||||  |||||| |||||| |||||||| |    
T  7262234 tagtggttgacttgtgatcttgtagtgtgatcctctcaaggtctcaagtttgattctccatgatgccaatttcgatggacaaatccatatagagctttac 7262333  T
Q  476 tttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |    |||||||  || | || |||| ||||| |  || ||||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  7262334 t----ctggctttaaatg-ggtccccacaagt-gatggtgggattggtcccctcgaattagtcggcccttgaatcggataccgagttt 7262415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 21218032 - 21217834
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| || |||||||||||| || | || |    
T  21218032 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagt 21217933  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||    || ||||  |||| | ||||| ||||||||||| ||||||| | | |||| |||||| | | |||||||||||||||||    
T  21217932 ccatacagagc-ttgct----ctagctttaaacgggccccccacaagtgggcggtgggattgatcccctcggattagttgattcttggatcggataccga 21217838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 403 - 563
Target Start/End: Complemental strand, 654861 - 654706
Alignment:
Q  403 tgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgctttggctggcttagaacgaggccccc 501  Q
    ||||||||  ||||| ||| ||| |||||||| ||||||||||||||| || | || |||||||||||||| |||    |||||||  |||| |||||||    
T  654861 tgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gct----ctggctttaaacg-ggccccc 654768  T
Q  502 gcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||| ||||||||| | |||| |||||||||| |||||||||||||||||||||    
T  654767 gcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccgagttt 654706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 368 - 563
Target Start/End: Complemental strand, 42913705 - 42913514
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcg-gcggacaactccataca 466  Q
    ||||||||||||||||| |||||||||||||||| |||||||||  |||| ||| ||| |||| | ||||||||||||||||   ||| || |||||||     
T  42913705 ggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttcatatggtgccaatttcgatgggataagtccatacg 42913606  T
Q  467 gagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    || | |||||    |||||||  |||| ||||||||||||||| ||| ||||||||| | |||| |||||| | | ||| |||||||||||||||||    
T  42913605 gaac-ttgct----ctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagttt 42913514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 370 - 554
Target Start/End: Original strand, 47541395 - 47541574
Alignment:
Q  370 ttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagag 469  Q
    |||||||| ||||||  ||  ||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||| |||||| | ||| ||| |    
T  47541395 ttggcctaatggttggtttcagatcttggagtgtgctcctctcaaggttttaagtttgattctctttggtgtcaatttcggtggacaagttcatccag-g 47541493  T
Q  470 ctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
    ||||||||    |||||||||||| | ||||||||||||| | | || |||||| | ||   |||||||| ||||| ||||||||    
T  47541494 ctttgctt----tggcttagaacgggccccccgcaagtggacagtggaattggtccccttagattagtcgatccttagatcggat 47541574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 361 - 482
Target Start/End: Complemental strand, 8435894 - 8435773
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| |||||||| ||||||||||||||||||||||||||| ||||||| | ||| | | | ||| |||| ||| ||||||||||||||| || ||| ||    
T  8435894 catttggggttggtctagtggttgacttgggatcttggagtttgctcctttgaagatcttaggttcgatttcctctggtgccaatttcggtgggcaagtc 8435795  T
Q  461 catacagagctttgctttggct 482  Q
    |||||| ||||||| |||||||    
T  8435794 catacaaagctttgttttggct 8435773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 243 - 343
Target Start/End: Complemental strand, 19835484 - 19835384
Alignment:
Q  243 aggatagcatatagcggtatgataaataacgaccattgatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttata 342  Q
    |||||||| |||||| |||||| ||||| ||  || |||||||||||||||||||||| || |||||||  ||||||||||||||| |||||||||||||    
T  19835484 aggatagcgtatagctgtatgacaaatagcggtcactgatatttgattattttttggagaaattacatgattaatactataaagtataaacaaacttata 19835385  T
Q  343 t 343  Q
    |    
T  19835384 t 19835384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 563
Target Start/End: Original strand, 10091185 - 10091387
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| |||||||| |||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||| ||||||||||| || |    
T  10091185 taacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggc 10091284  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || |||||||||||| |||||    |||||||  || | || |||||||||||||||| ||||||| | | |||| |||||||| | ||| |||| |||    
T  10091285 taagtccatacagagc-ttgct----ctggctttaaatggggtccccgcaagtgggcggtgggattgatcccctcggattagtcgattctt-gatccgat 10091378  T
Q  555 accgagttt 563  Q
    |||||||||    
T  10091379 accgagttt 10091387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 13726541 - 13726430
Alignment:
Q  229 aaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatttgattattttttggacaagttacatgtataatactataaagta 328  Q
    |||||||||||||  ||||||| |||||| |||||| | ||| ||  || ||||||||||||||||||||||||| ||||||| ||||||||||||| ||    
T  13726541 aaaagtgggatag--ggatagcgtatagcagtatgaaatatagcggtcactgatatttgattattttttggacaaattacatgaataatactataaa-ta 13726445  T
Q  329 caaacaaacttatat 343  Q
     ||||||||||||||    
T  13726444 taaacaaacttatat 13726430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 376 - 563
Target Start/End: Original strand, 22703503 - 22703686
Alignment:
Q  376 tagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttg 474  Q
    ||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||| ||||||||| || | || |||||||| ||| |||    
T  22703503 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagc-ttg 22703601  T
Q  475 ctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||    |||||||  |||| | ||||||||||||||||| ||||||||| | |||| |||||||| | ||| ||||||||||| |||||    
T  22703602 ct----ctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattctttgatcggatacccagttt 22703686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 357 - 482
Target Start/End: Original strand, 1469110 - 1469235
Alignment:
Q  357 aactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggaca 456  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| || || ||||||||| ||| ||| |||| ||| |  |||||||||||  || ||    
T  1469110 aactcatttggggttggcctagtggttgacttgaaatcttggagtttgttcatctcaaggtctcaggttcgatttcctttaatgccaatttcgatgggca 1469209  T
Q  457 actccatacagagctttgctttggct 482  Q
    | |||||||| |||||| ||||||||    
T  1469210 agtccatacaaagctttactttggct 1469235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 9769588 - 9769784
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| |||||||| ||| ||||||| |||| ||||||||||||||||||||||| |||||  ||||||||| || || || ||||||| | || ||| |     
T  9769588 catttggggttgggctaatggttgatttggaatcttggagtgtgctcctctcaatgtttcgggtttgattctctctgatgtcaatttcagtgggcaagtt 9769687  T
Q  461 catacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgag 560  Q
    ||| |||||| ||| |    ||| ||||||||| ||||||||||| | | ||| ||||||||| | || ||||||||||||||||| | || ||||||||    
T  9769688 cattcagagc-ttgtt----ctgtcttagaacggggcccccgcaaat-gacggtgggattggtccccttgaattagtcggtccttgaaccgaataccgag 9769781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 357 - 472
Target Start/End: Complemental strand, 13332626 - 13332510
Alignment:
Q  357 aactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac- 455  Q
    |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||  |||||||| ||| ||||||||||| || |     
T  13332626 aactcatttggggttggcctagtggttggcttgggatcttggagtttgctcctcctgaggtctcaggtacgattccctctggagccaatttcggtgggct 13332527  T
Q  456 aactccatacagagctt 472  Q
    || ||||||||||||||    
T  13332526 aagtccatacagagctt 13332510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 738 - 790
Target Start/End: Original strand, 22696646 - 22696698
Alignment:
Q  738 tatccccatgttgtgttttccagttgaaagatagaagactgtgttccgcgacg 790  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22696646 tatccccatgttgtgttttccagttgaaagatagaagactgtgtttcgcgacg 22696698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 367 - 563
Target Start/End: Complemental strand, 23012701 - 23012509
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatac 465  Q
    ||||||||| |||||||| |||||||||||||||| |||| |||   |||| | | |||||||||||| | ||||||||||||| || | || |||||||    
T  23012701 gggttggcccagtggttggcttgggatcttggagtttgcttctccagaggtcttaggtttgattccctctagtgccaatttcggtgggctaagtccatac 23012602  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||| |||||    |||||||  || | ||||||| ||||||||||| ||||||||| | |||| |||||||  | | | |||||||||||||||||    
T  23012601 agagc-ttgct----ctggctttaaatggggcccccacaagtgggcggtgggattggtcccctcgtattagtcaattcattgatcggataccgagttt 23012509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 356 - 563
Target Start/End: Original strand, 27009356 - 27009560
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| ||||||||||||||||||| ||| |||||||||||| ||||| ||   |||| ||| ||| ||| |||| ||||||||||||||| || |    
T  27009356 taacccatttggggttggcctagtggttggcttcggatcttggagtttgctcatccagaggtctcaggttcgatcccctctggtgccaatttcggtgggc 27009455  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgc-aagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
     || |||||||||||| |||||    ||| |||  |||| |||||| || |||||| ||| ||||||||| | ||| ||||||||| | ||||||| |||    
T  27009456 taagtccatacagagc-ttgct----ctgactttaaacggggcccctgcaaagtggacggtgggattggtcccctcaaattagtcgattcttggattgga 27009550  T
Q  554 taccgagttt 563  Q
    ||||||||||    
T  27009551 taccgagttt 27009560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 563
Target Start/End: Original strand, 31273936 - 31274113
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgctttg 479  Q
    ||||||||||||||||||||| ||||||||   || | ||||||| |||||||| ||| || ||||||||||| | || |||||||||||| |||||       
T  31273936 gttgacttgggatcttggagtttgctcctccagagctctcaagttcgattccctctggagctaatttcggcgggctaagtccatacagagc-ttgct--- 31274031  T
Q  480 gctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
     |||||||  |||| || | |||||||||||| | | ||||||| | ||||||||||||| | |||||| ||||||||||||||    
T  31274032 -ctggctttaaacg-gggctccgcaagtgggcagtgagattggtcccctcgaattagtcgattcttggaccggataccgagttt 31274113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 361 - 471
Target Start/End: Original strand, 36173037 - 36173147
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| |||||||||||  || |||||||||||| ||||||| || || ||||||||||||| ||| |||||||| | |||||||||| || || ||| ||    
T  36173037 catttggggttggccttatgattgacttgggattttggagtttgttcatctcaaggtttcaggttcgattccctcttgtgccaattttggtgggcaagtc 36173136  T
Q  461 catacagagct 471  Q
    |||||||||||    
T  36173137 catacagagct 36173147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 376 - 552
Target Start/End: Original strand, 37056231 - 37056394
Alignment:
Q  376 tagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgc 475  Q
    |||||||||  ||| ||||||||||||||||||||||||||||| |  || |||| ||| ||||||||||||||  |||||| |||||||  ||||        
T  37056231 tagtggttggtttgtgatcttggagtgtgctcctctcaaggtttgagattcgatttcctctggtgccaatttcgatggacaagtccatac--agct---- 37056324  T
Q  476 tttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgg 552  Q
         ||||||||||||| ||  ||||||||||||| | ||||||||| |  |||||| ||||||||||||||||||    
T  37056325 -----ctggcttagaacgggg--cccgcaagtgggctgtgggattggtcccatcgaatcagtcggtccttggatcgg 37056394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 373 - 450
Target Start/End: Original strand, 22299863 - 22299940
Alignment:
Q  373 gcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||||||||| |||||||||||||||| ||||||||   |||| ||||||| |||||||| |||||||||||||||    
T  22299863 gcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcgg 22299940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 414 - 563
Target Start/End: Original strand, 29861725 - 29861870
Alignment:
Q  414 aggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcg 512  Q
    |||| ||| ||| |||||||| ||||||||||||||| || | || |||||||||| ||| |||    |||||||  |||| ||||||||||||||||||    
T  29861725 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagaactt-gct----ctggctttaaacggggcccccgcaagtgggcg 29861819  T
Q  513 gcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    | ||||||| | | ||||||||||||| | ||| |||||||||||||||||    
T  29861820 gtgggattgatcccctcgaattagtcgattcttagatcggataccgagttt 29861870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 186 - 339
Target Start/End: Complemental strand, 48826384 - 48826231
Alignment:
Q  186 cataatagtcaatcccggataatggtgtgtagcggttgaccctaaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatt 285  Q
    |||| ||||||||| ||||||   ||| |||| ||  |||||||||||||||||||  ||||||  ||||||||||||| |||||  |  ||  || |||    
T  48826384 catagtagtcaatctcggatagcagtgcgtagtggccgaccctaaaagtgggatagcgggatagagtatagcggtatgacaaatagtggtcaccgacatt 48826285  T
Q  286 tgattattttttggacaagttacatgtataatactataaagtacaaacaaactt 339  Q
    ||||||||||||| |||| ||||||| |||||  ||||||||| ||||||||||    
T  48826284 tgattattttttgaacaaattacatgaataatggtataaagtataaacaaactt 48826231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 361 - 557
Target Start/End: Original strand, 17212055 - 17212247
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||| ||||||||| |||||||||||||||| ||||||||   |||| ||| |||  |||| || ||||||||||||||| || | || |    
T  17212055 catttggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcggtgggctaagt 17212154  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggatacc 557  Q
    ||||||||||  |||||    |||||||| |||| | |||| ||||||| | || ||||||||| | |||| |||||||| | |||||||| ||||||    
T  17212155 ccatacagag-attgct----ctggcttaaaacgggacccctgcaagtgagtggtgggattggtcccctcggattagtcgattcttggatcagatacc 17212247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 448
Target Start/End: Complemental strand, 7800031 - 7799944
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttc 448  Q
    |||| ||||||| ||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| |||||||||||||    
T  7800031 catttggggttgacctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 7799944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 280 - 343
Target Start/End: Complemental strand, 19423986 - 19423924
Alignment:
Q  280 gatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatat 343  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||||| ||||||||||||||    
T  19423986 gatatttgattattttt-ggacaatttacatgaataatactataaagtataaacaaacttatat 19423924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 28089818 - 28090019
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||| ||||||||||| ||||||||   | || ||| ||| ||| |||| ||||| ||||||||| || | || |    
T  28089818 catttggggttggcctagtggttggcttgagatcttggagtttgctcctccagatgtctcaggttcgataccctctggtgtcaatttcggtgggctaagt 28089917  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||| || |  ||||   |||||||  || | ||||||||||||||||||  | ||||||| | |||| |||||||| | |||||||||||||||||    
T  28089918 ccatacaaag-tgagcttgctctggctttaaatg-ggcccccgcaagtgggcgatgagattggtcccctcggattagtcgattcttggatcggataccga 28090015  T
Q  560 gttt 563  Q
    ||||    
T  28090016 gttt 28090019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 366 - 563
Target Start/End: Original strand, 47380905 - 47381090
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatac 465  Q
    ||||||||||||||||||| |||| ||| ||| ||| ||||| ||||||| ||| | ||| ||||| |  | ||||||||||||| |  ||| |||||||    
T  47380905 ggggttggcctagtggttggcttgagattttgtagtttgctcttctcaagattttaggttcgattctcacttgtgccaatttcggtgtgcaagtccatac 47381004  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    | |||||           |||||||||| |||| | |||||||||||| ||||||||| | || ||||||||||||||||| ||||||||| ||||||    
T  47381005 atagctt-----------gcttagaacggggcctctgcaagtgggcggtgggattggtcc-cttgaattagtcggtccttgaatcggatactgagttt 47381090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 3851875 - 3851957
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| ||||||||||||||||||| ||||||| | | |||| |||||||| | |||||||||||||||||||||    
T  3851875 ctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttt 3851957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 358 - 463
Target Start/End: Complemental strand, 3950991 - 3950885
Alignment:
Q  358 actcattaggggttggcctagtggttgacttggga-tcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggaca 456  Q
    ||||||| |||||||| |||||||||| |||| || |||||||| ||||||||||||| || ||| ||| |||||||| |||||| ||||| || |||||    
T  3950991 actcatttggggttggtctagtggttggcttgagaatcttggagcgtgctcctctcaatgtctcatgttcgattccctttggtgctaattttggtggaca 3950892  T
Q  457 actccat 463  Q
    | |||||    
T  3950891 agtccat 3950885  T

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Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 369 - 450
Target Start/End: Original strand, 42814874 - 42814955
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||| |||||||||||||||||||||||||| |||||||||  | || ||| ||| |||||||| ||||| |||||||||    
T  42814874 gttggcttagtggttgacttgggatcttggagtttgctcctcttgaagtctcaggttcgattccctctggtgtcaatttcgg 42814955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 410 - 559
Target Start/End: Complemental strand, 1766293 - 1766149
Alignment:
Q  410 ctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgg 509  Q
    |||||| | ||||||| |||||||| | ||| ||||||||| ||  || |||||||||| |||||| ||||||    ||||||| ||||||  |||||||    
T  1766293 ctcaagttctcaagttcgattcccttttgtgtcaatttcggtgggtaagtccatacagaactttgccttggct----tagaacggggcccca-caagtgg 1766199  T
Q  510 gcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||  |||||||| | |||| |||||||||| |||| ||||||||||||    
T  1766198 gcggttggattggtcccctcggattagtcggtacttgaatcggataccga 1766149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 244 - 343
Target Start/End: Complemental strand, 24375676 - 24375578
Alignment:
Q  244 ggatagcatatagcggtatgataaataacgaccattgatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatat 343  Q
    ||||||| ||||||||||| | ||||| ||  ||  || |||||||||||||||| |||| ||||||| ||||||||||||| || ||||||||||||||    
T  24375676 ggatagcgtatagcggtataacaaatagcggtcaccgacatttgattattttttg-acaaattacatgaataatactataaactataaacaaacttatat 24375578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 252 - 358
Target Start/End: Complemental strand, 22023864 - 22023758
Alignment:
Q  252 tatagcggtatgataaataacgaccattgatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatatttaatata 351  Q
    ||||||||||||||||||| | | |    |||||||||  |||||||||||| | ||||| |||||| ||||||||| || |||||  ||||||||||||    
T  22023864 tatagcggtatgataaatagcaatccccaatatttgatagttttttggacaaataacatgaataataatataaagtataagcaaacgaatatttaatata 22023765  T
Q  352 aaattaa 358  Q
    |||||||    
T  22023764 aaattaa 22023758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 22638406 - 22638488
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| |||| |||||||||||||| ||||||| |   ||||||||||||| | |||||||||||||||||||||    
T  22638406 ctggctttaaacggggcctccgcaagtgggcggtgggattgatctcctcgaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 31197593 - 31197790
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||| |||||||||| |||||||||||||||| ||||| ||   | || ||| |||||||||  |||| || ||||||||| |||  || |    
T  31197593 catttggggttggtctagtggttggcttgggatcttggagtttgctcatccagatgtctcaggtttgattcattatg-tgtcaatttcggtggattaagt 31197691  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||| ||| |||    || ||||  |||| ||||||||||||||| ||| ||||||||| | |||  |||||||| | ||||||||||||| |||    
T  31197692 ccatacagatctt-gct----cttgctttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcga 31197786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 501 - 563
Target Start/End: Complemental strand, 31712965 - 31712903
Alignment:
Q  501 cgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  31712965 cgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 31712903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 358 - 414
Target Start/End: Complemental strand, 3951193 - 3951136
Alignment:
Q  358 actcattaggggttggcctagtggttgacttggg-atcttggagtgtgctcctctcaa 414  Q
    ||||||| |||||||| |||||||||| |||||| |||||||||||||||||||||||    
T  3951193 actcatttggggttggtctagtggttggcttggggatcttggagtgtgctcctctcaa 3951136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 430 - 563
Target Start/End: Original strand, 23092167 - 23092296
Alignment:
Q  430 tccctatggtgccaatttcggcggac-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctct 528  Q
    ||||| ||||||||||||||| || | || |||||||||||||| |||    |||||||  |||| ||||||||||| ||| ||| ||||||||| | ||    
T  23092167 tccctctggtgccaatttcggtgggctaagtccatacagagctt-gct----ctggctttaaacggggcccccgcaaatggacggtgggattggtcccct 23092261  T
Q  529 cgaattagtcggtccttggatcggataccgagttt 563  Q
    || |||||||| | | |||||||||||||||||||    
T  23092262 cggattagtcgattcatggatcggataccgagttt 23092296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 23854398 - 23854447
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  23854398 catttggggttggcctagtggttggcttgggatcttggagtttgctcctc 23854447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 32849593 - 32849642
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    |||| |||||| ||||||||||||||||||||||||||||| ||||||||    
T  32849593 catttggggttagcctagtggttgacttgggatcttggagtttgctcctc 32849642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 24237134 - 24237194
Alignment:
Q  280 gatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaactta 340  Q
    ||||||||||||||||||| |||| ||||||| |||||  ||||||||| |||||||||||    
T  24237134 gatatttgattattttttgaacaaattacatgaataatgttataaagtataaacaaactta 24237194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 31713094 - 31713010
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaat 445  Q
    |||| |||||||||||||||||||  ||||||||||||||| ||||||||   |||| ||| | |||||| ||| ||||||||||    
T  31713094 catttggggttggcctagtggttggtttgggatcttggagtttgctcctcgagaggtctcaggattgatttcctctggtgccaat 31713010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 368 - 563
Target Start/End: Complemental strand, 39145844 - 39145653
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccat-ac 465  Q
    ||||| |||||||||||||||||||||||||||| ||||||||   | || |   ||| |||||||| ||||||||||||||| || | || || || ||    
T  39145844 ggttgacctagtggttgacttgggatcttggagtttgctcctccagatgtcttcggttcgattccctgtggtgccaatttcggtgggctaagtcaataac 39145745  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||| |||||    |||||||  |||| |||||| |||||||| ||| ||||||||| | ||||||||||||| | |||| ||| |||||| |||||    
T  39145744 agagc-ttgct----ctggctttaaacg-ggcccctgcaagtggacggtgggattggtcccctcgaattagtcgattcttgaatcagataccaagttt 39145653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 375 - 470
Target Start/End: Original strand, 31481063 - 31481158
Alignment:
Q  375 ctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagc 470  Q
    ||||||||||||||| ||| ||||||||||||||||| || || | ||||| |||| ||| |  |||||||||||| |||||| || ||| |||||    
T  31481063 ctagtggttgacttgagattttggagtgtgctcctcttaaagtcttaagttggatttcctctaatgccaatttcggtggacaagtcaatatagagc 31481158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 368 - 450
Target Start/End: Original strand, 9683835 - 9683917
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||  |||| ||| |  | ||||||| | |||||||||||||    
T  9683835 ggttggcctagtggttgacttgagatctgggagtttgctcctctagaggtctcaggcctaattccctctagtgccaatttcgg 9683917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 497 - 563
Target Start/End: Original strand, 16374128 - 16374194
Alignment:
Q  497 cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||| ||| ||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  16374128 cccccgcaaatggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 16374194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 19421233 - 19421431
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||| | ||||||||| |||||||||||||||| |||||||||  |||| ||| ||| |||| | | ||||| ||||||||  || | || |    
T  19421233 catttggggttgacttagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttcttctggtgtcaatttcgatgggctaagt 19421332  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||    ||| |||  || | ||| ||| ||||||||||| |||||||||   |||| |||||||| | |||| ||| ||||||||    
T  19421333 ccatacagagc-ttgct----ctgactttaaatggggcgcccacaagtgggcggtgggattggtctcctcggattagtcgattcttgaatcagataccga 19421427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 319
Target Start/End: Original strand, 46660827 - 46660921
Alignment:
Q  226 cctaaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatttgatta-ttttttggacaagttacatgtataatac 319  Q
    ||||||| ||| ||||  ||||||| ||||||||||| | ||||||  | |||||||||||||| | |||||||||||| ||||||| |||||||    
T  46660827 cctaaaaatggaatagtgggatagcgtatagcggtatcacaaataataatcattgatatttgatcatttttttggacaaattacatgaataatac 46660921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 577668 - 577737
Alignment:
Q  348 tataaaattaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggt 417  Q
    |||||| | |||||||| ||||||||||||||||||  ||||||||||| |||| ||||| | |||||||    
T  577668 tataaagtgaactcatttggggttggcctagtggtttgcttgggatcttagagtttgctcatttcaaggt 577737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 9718179 - 9718098
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcg 449  Q
    ||||||||||||||||| | || ||| ||||||| ||||||||  || || ||||||| |||||||| ||||| ||||||||    
T  9718179 ggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcg 9718098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 563
Target Start/End: Complemental strand, 11910028 - 11909955
Alignment:
Q  490 aacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||  ||||||| ||| ||||||||| ||||||||||||||| |||||| ||  |||| |||||||    
T  11910028 aacgaggcccctacaagtggacggtgggattggtcctctcgaattagtcgatccttgaattagatatcgagttt 11909955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 563
Target Start/End: Original strand, 17279666 - 17279731
Alignment:
Q  498 ccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||  || ||| ||||||||| | ||| |||||||||||| ||||||||||||||||||||    
T  17279666 ccccgcaaacggacggtgggattggtcccctcaaattagtcggtctttggatcggataccgagttt 17279731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 361 - 450
Target Start/End: Original strand, 22638294 - 22638383
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| |||||||| ||||||||||||||| |||||| |||| ||||| |   ||||| ||| ||| |||||||| |||||| ||||||||    
T  22638294 catttggggttggtctagtggttgacttgagatcttagagtttgctctttcaaaggtctcaggttcgattccctctggtgctaatttcgg 22638383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 25956359 - 25956307
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcctctcaaggt 417  Q
    ||||||||||||||||  || ||||||| ||||||||||||||||||||||||    
T  25956359 gggttggcctagtggtattggcttgggaccttggagtgtgctcctctcaaggt 25956307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 674605 - 674557
Alignment:
Q  382 ttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgatt 430  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||| ||||    
T  674605 ttgacttgagattttggagtgtgctcctctcaaggtctcaagttcgatt 674557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 367 - 447
Target Start/End: Complemental strand, 4566495 - 4566412
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcct-ctcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||||||||||||||  |||||| ||| ||||||||||  |||| |||||||| ||| ||||||||| || ||||||||||||    
T  4566495 gggttggcctagtggtattgacttcggaccttggagtgtattccttctcaaggtctcaggtttgattctctctggtgccaattt 4566412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 374 - 414
Target Start/End: Complemental strand, 24686167 - 24686127
Alignment:
Q  374 cctagtggttgacttgggatcttggagtgtgctcctctcaa 414  Q
    |||||||||||||||||||||||||||| ||||||| ||||    
T  24686167 cctagtggttgacttgggatcttggagtttgctcctttcaa 24686127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 367 - 447
Target Start/End: Complemental strand, 26459477 - 26459394
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||||||||||||||  || ||||||| || |||||||||||||| ||||||| ||| ||| ||||| || ||||||||||||    
T  26459477 gggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 26459394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 43785498 - 43785386
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||| |||| |||||| ||||||||||| |||  ||||||||  ||||| ||||||| |||||||  | |||| |||||| | |||| || |    
T  43785498 catttggggttgacctaatggttggcttgggatctttgagattgctcctccaaaggtctcaagttcgattcccacttgtgctaatttcagtggactaagt 43785399  T
Q  460 ccatacagagctt 472  Q
    |||||||||||||    
T  43785398 ccatacagagctt 43785386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 497 - 556
Target Start/End: Complemental strand, 8943468 - 8943409
Alignment:
Q  497 cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggatac 556  Q
    ||||||||||||||||| | ||||||| | || |||||||||| | ||||||||||||||    
T  8943468 cccccgcaagtgggcggtgtgattggtccccttgaattagtcgattcttggatcggatac 8943409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 447
Target Start/End: Complemental strand, 29385794 - 29385727
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    |||| |||||||  |||||||||||||||| ||||||| ||| ||||||||| || ||||||||||||    
T  29385794 gttggcttgggactttggagtgtgctcctcctcaaggtctcaggtttgattctctttggtgccaattt 29385727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 379 - 563
Target Start/End: Original strand, 35476362 - 35476541
Alignment:
Q  379 tggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgcttt 478  Q
    |||||||||| ||||||| ||||||| |  ||||||||  | | ||| ||||| || |||||||||||| || ||  || | ||||||||||||||||      
T  35476362 tggttgactttggatctttgagtgtgtttttctcaaggcct-aggttcgattctctttggtgccaattttggtgggtaagttcatacagagctttgct-- 35476458  T
Q  479 ggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
      ||||||||||||| | |||| |||| ||  ||| || ||||||   || | ||||||||||| || |||||||||||||||||    
T  35476459 --ctggcttagaacgggacccctgcaaatgaccggtggaattggtctccttggattagtcggtctttagatcggataccgagttt 35476541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 417
Target Start/End: Complemental strand, 23637064 - 23637030
Alignment:
Q  383 tgacttgggatcttggagtgtgctcctctcaaggt 417  Q
    |||||||||| ||||||||||||||||||||||||    
T  23637064 tgacttgggaccttggagtgtgctcctctcaaggt 23637030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 497 - 563
Target Start/End: Original strand, 25333537 - 25333602
Alignment:
Q  497 cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||||| | ||||||||| | |||| |||||||| | ||||||||||| |||||||||    
T  25333537 cccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttggatcgga-accgagttt 25333602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 382 - 447
Target Start/End: Complemental strand, 25655278 - 25655212
Alignment:
Q  382 ttgacttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||||||||||||  ||||||| ||||| ||||||||||| ||| ||||| || ||||||||||||    
T  25655278 ttgacttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgattctctctggtgccaattt 25655212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 360 - 410
Target Start/End: Original strand, 28003837 - 28003887
Alignment:
Q  360 tcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    ||||| |||||||  |||||||||| |||||||||||||||| ||||||||    
T  28003837 tcatttggggttgatctagtggttggcttgggatcttggagtttgctcctc 28003887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 367 - 433
Target Start/End: Complemental strand, 33696245 - 33696179
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccc 433  Q
    ||||||| |||| |||||| ||| | ||||| ||||||||||||||||||||  |||||||| ||||    
T  33696245 gggttggtctagcggttgatttgaggtcttgaagtgtgctcctctcaaggttcaaagtttgactccc 33696179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 36772386 - 36772304
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| ||||||||  ||||||||| || ||| || |||||| |||||||| | ||| |||||||||||||||||    
T  36772386 ctggctttaaacggggcccccgggagtgggcggtggaattagtcctctcggattagtcgattctttgatcggataccgagttt 36772304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 355 - 401
Target Start/End: Complemental strand, 38864651 - 38864605
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagt 401  Q
    |||||||||| ||||||| |||||||||||||||| |||||| ||||    
T  38864651 ttaactcatttggggttgacctagtggttgacttgagatctttgagt 38864605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 41907596 - 41907515
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| |||||||||||||||| || ||||||||| | | |  |||||||| | |||||||||||||||||||||    
T  41907596 ctggctttaaacgtggcccccgcaagtgggtggtgggattggt-cccccagattagtcgattcttggatcggataccgagttt 41907515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 381 - 431
Target Start/End: Original strand, 46279039 - 46279089
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattc 431  Q
    |||||||| ||| |||||||||||||||||||||||| ||  |||||||||    
T  46279039 gttgactttggaccttggagtgtgctcctctcaaggtctccggtttgattc 46279089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 361 - 406
Target Start/End: Original strand, 25333421 - 25333466
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgct 406  Q
    |||| ||||||||| ||||||||| |||||||||||||||| ||||    
T  25333421 catttggggttggcttagtggttggcttgggatcttggagtttgct 25333466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 44628229 - 44628180
Alignment:
Q  386 cttgggatcttggagtgtgctcct-ctcaaggtttcaagtttgattccct 434  Q
    ||||||| |||||||||||||||| ||||| || ||||||||||||||||    
T  44628229 cttgggaccttggagtgtgctcctcctcaaagtctcaagtttgattccct 44628180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 1e-52; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 8192550 - 8192353
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||||| |||||||||| |||| || ||| ||    
T  8192550 catttggggttggcctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgccaatgtcggtgggcaagtc 8192451  T
Q  461 catacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgag 560  Q
    |||| |||||||||||    ||||||||||||| | ||| ||||||||||||| ||||||||  | |||| |||||||||||||||||||||||||||||    
T  8192450 catatagagctttgct----ctggcttagaacg-gcccctcgcaagtgggcggtgggattgggcccctcggattagtcggtccttggatcggataccgag 8192356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 15037957 - 15038155
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||||||||||||||||| ||||||||||||| ||||||||  ||||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  15037957 catttggggttggcctagtggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagt 15038056  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||||||||   ||| ||||  |||||||||||||||||| ||||||||| | |||  |||||||| | |||||||||||||||||    
T  15038057 ccatacagagc-ttgctttggct---tta-aacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccga 15038151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 44946252 - 44946054
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||| |||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  44946252 catttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagt 44946153  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||| | |||||    |||||||  |||| | ||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  44946152 ccatacagaac-ttgct----ctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 44946058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 355 - 563
Target Start/End: Complemental strand, 11941415 - 11941211
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg-cgg 453  Q
    ||||| |||| |||||||| |||||||||| |||||||||||||||| ||||||||   |||| ||| |||  |||||||||||||||||||| ||  ||    
T  11941415 ttaacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctatggtgccaattttggtggg 11941316  T
Q  454 acaactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
      || |||||||||||| |||||    |||||||  |||| | ||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||    
T  11941315 ttaagtccatacagagc-ttgct----ctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgga 11941221  T
Q  554 taccgagttt 563  Q
    ||||||||||    
T  11941220 taccgagttt 11941211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 4618879 - 4618763
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatac 465  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||| ||| |||| ||  |||||||||||||||||| ||| |||||||    
T  4618879 ggggttggcctagtggttggcttggaatcttggagtatgctcctctcaaggtttcaggttcgatttcccctggtgccaatttcggcgggcaagtccatac 4618780  T
Q  466 agagctttgctttggct 482  Q
    | | ||||||| |||||    
T  4618779 aaaactttgctctggct 4618763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 33827772 - 33827574
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||  ||||||||   |||| ||| ||| |||||||| ||||||||||||||  || | || |    
T  33827772 catttggggttggcctagtggttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccctctggtgccaatttcgttgggctaagt 33827673  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||    |||||||  |||| | |||| |||||||||||| ||||||||| | || | |||||||| | |||||||||||||||||    
T  33827672 ccatacagagc-ttgct----ctggctttaaacgggacccctgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccga 33827578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 350 - 563
Target Start/End: Complemental strand, 28194344 - 28194139
Alignment:
Q  350 taaaattaactcattaggggttggcctagtggtt-gacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttc 448  Q
    |||||| ||| |||| ||||||||| ||||| || | |||||||||||||||||||||||||| ||||| | | ||| ||||| || |||||||||||||    
T  28194344 taaaatgaacccatttggggttggcgtagtgatttggcttgggatcttggagtgtgctcctcttaaggtcttaggttcgattctctctggtgccaatttc 28194245  T
Q  449 ggcggacaactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctc-tcgaattagtcggtccttgg 547  Q
    || || ||| ||||||||||||             |||||||||| ||||||||||||| ||||| ||||||||| ||| ||  ||||||||||||||||    
T  28194244 ggtgggcaagtccatacagagc---------aaaagcttagaacggggcccccgcaagtaggcggtgggattggt-ctcgtcagattagtcggtccttgg 28194155  T
Q  548 atcggataccgagttt 563  Q
    ||||||||||||||||    
T  28194154 atcggataccgagttt 28194139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 484 - 563
Target Start/End: Original strand, 14486942 - 14487021
Alignment:
Q  484 gcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||| |||||| |||||||||||| ||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  14486942 gcttagaacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 14487021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 356 - 563
Target Start/End: Complemental strand, 30467034 - 30466831
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| |||||||||||||||||||  ||||||| ||||||| || ||||||  |||| ||| ||| ||||| || || |||||||||||| || |    
T  30467034 taacccatttggggttggcctagtggttggtttgggatattggagtttgttcctctagaggtctcaggttcgattctctctgctgccaatttcggtgggc 30466935  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || |||||||||||| |||||    |||||||  |||  ||||||||||||||||| | ||||||||| |  ||| |||||||| | ||||||||||||    
T  30466934 taagtccatacagagc-ttgct----ctggctttaaaccgggcccccgcaagtgggcagtgggattggtcccttcggattagtcgattcttggatcggat 30466840  T
Q  555 accgagttt 563  Q
    |||||||||    
T  30466839 accgagttt 30466831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 224 - 342
Target Start/End: Complemental strand, 29264532 - 29264414
Alignment:
Q  224 accctaaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatttgattattttttggacaagttacatgtataatactata 323  Q
    |||| |||| ||||||||  ||||||| ||||||||||||| ||| |  |  ||  |||||||||||||||||||||||| ||||||| |||||||||||    
T  29264532 accccaaaaatgggatagcgggatagcgtatagcggtatgacaaaaagtggtcaccgatatttgattattttttggacaaattacatgaataatactata 29264433  T
Q  324 aagtacaaacaaacttata 342  Q
    ||||| |||||||||||||    
T  29264432 aagtataaacaaacttata 29264414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 380 - 563
Target Start/End: Original strand, 29698164 - 29698342
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttg 479  Q
    ||||| |||||||||||||| | ||||||||||||||| |||||||| ||| ||| ||||| ||||||||| || ||| | ||||||||||||| ||       
T  29698164 ggttggcttgggatcttggaatttgctcctctcaaggtctcaagttttatttcctctggtgtcaatttcggtgggcaagttcatacagagctttact--- 29698260  T
Q  480 gctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
     ||| |||| ||| ||| |||||||| ||||||  | ||||||| | ||||||| ||| ||||||| ||||| |||||||||||    
T  29698261 -ctgacttaaaac-aggaccccgcaaatgggcgatgagattggtcccctcgaataagttggtccttagatcgtataccgagttt 29698342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 19054023 - 19054222
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||| ||||||||| ||| |||| ||||||||||| ||||||||  ||||| ||| |||||||||| | |||||  || ||||| || | || |    
T  19054023 catttggggtgggcctagtgattggcttgagatcttggagtctgctcctccaaaggtctcaggtttgattccttctggtgttaacttcggtgggctaagt 19054122  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||||||||   ||| |  ||  ||||||||||||||||| ||||||||| | |||| |||||||| | |||||||| ||||||||    
T  19054123 ccatacagagctt-gctttggct---ttaaatggaaccccccgcaagtgggcggtgggattggtccgctcggattagtcgattcttggatcagataccga 19054218  T

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Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 367 - 563
Target Start/End: Complemental strand, 19606038 - 19605847
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccataca 466  Q
    |||||| ||||||||||| ||||||||||||||||| |||||||||||||| ||| ||| |||||||| |  ||| |||||||| || ||| ||||||||    
T  19606038 gggttgccctagtggttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgattccctctaatgctaatttcggtgggcaagtccataca 19605939  T
Q  467 gagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||  |||||    ||  ||||||| | ||  ||| ||||||||||| | ||||||| | ||||||||||| |   ||||||||||||| |||||||    
T  19605938 gagtcttgct----ctcacttagaaag-ggggcccacaagtgggcggtgagattggtcccctcgaattagttgacacttggatcggatatcgagttt 19605847  T

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Target: chr2; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 357 - 563
Target Start/End: Original strand, 17324760 - 17324960
Alignment:
Q  357 aactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac- 455  Q
    |||||||| |||||||||||||||||||  |||| |||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || |     
T  17324760 aactcatttggggttggcctagtggttggtttggtatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggct 17324859  T
Q  456 aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggata 555  Q
    || |||||||||||| |||||    |||||||  || | ||||||| ||||||||||| |||||| || | ||| ||||||||| | ||| |||||||||    
T  17324860 aagtccatacagagc-ttgct----ctggctttaaatg-ggcccccacaagtgggcggtgggattagtcccctcaaattagtcgattctt-gatcggata 17324952  T
Q  556 ccgagttt 563  Q
     |||||||    
T  17324953 tcgagttt 17324960  T

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Target: chr2; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 366 - 563
Target Start/End: Original strand, 41329846 - 41330038
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccata 464  Q
    ||||||||||||||||||   |||||||||| |||| ||||||||  |||||||||  || |||||||| |||||||||||| ||||| | || ||||||    
T  41329846 ggggttggcctagtggttagtttgggatcttagagtttgctcctccaaaggtttcagattcgattccctctggtgccaattttggcgggctaagtccata 41329945  T
Q  465 cagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
     ||||| |||||    |||||||  || | ||||||| ||||||||||| | ||||||| | |||  |||||||||| |||||| ||||||||||||||    
T  41329946 -agagc-ttgct----ctggctttaaatggggcccccacaagtgggcggtgagattggtcccctcagattagtcggttcttggaccggataccgagttt 41330038  T

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Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 356 - 448
Target Start/End: Original strand, 4852551 - 4852643
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttc 448  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||  ||||| ||| ||| |||||||| |||||| ||||||    
T  4852551 taactcatttggggttgacctagtggttgacttggaatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgctaatttc 4852643  T

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Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 369 - 447
Target Start/End: Complemental strand, 3405343 - 3405265
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    |||| |||||||||||||||||||||||||| ||||||| |||||||||  || ||| |||||||| ||||||||||||    
T  3405343 gttgacctagtggttgacttgggatcttggaatgtgctcatctcaaggtcacaggttcgattccctctggtgccaattt 3405265  T

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Target: chr2; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 368 - 450
Target Start/End: Original strand, 25293171 - 25293253
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||| ||||||||||||||||||||||||||| ||||||||   |||| ||| ||| |||||||| |||||||||||||||    
T  25293171 ggttggtctagtggttgacttgggatcttggagtttgctcctcgagaggtctcaggttcgattccctctggtgccaatttcgg 25293253  T

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Target: chr2; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 436 - 563
Target Start/End: Original strand, 28668946 - 28669069
Alignment:
Q  436 tggtgccaatttcggcggac-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaatt 534  Q
    ||||||||||||||| |||| || |||||||||||||| |||||||||   ||| |||| ||||||| ||||||||||| ||||||||| | |||| |||    
T  28668946 tggtgccaatttcggtggactaagtccatacagagctt-gctttggct---tta-aacggggcccccacaagtgggcggtgggattggtcccctcggatt 28669040  T
Q  535 agtcggtccttggatcggataccgagttt 563  Q
    ||||| |  ||||||||||||||||||||    
T  28669041 agtcgatttttggatcggataccgagttt 28669069  T

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Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 360 - 521
Target Start/End: Complemental strand, 44976354 - 44976196
Alignment:
Q  360 tcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aac 458  Q
    ||||| ||||||||||||||||||| ||||||||||||| || ||||||||   |||| ||| ||| |||||||| |||||||||||| || || | ||     
T  44976354 tcatttggggttggcctagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaag 44976255  T
Q  459 tccatacagagctttgctttggctggcttagaacgaggc-ccccgcaagtgggcggcgggattg 521  Q
    ||||||||||| ||||||    |||||||  |||| ||| |||||||||||||||| |||||||    
T  44976254 tccatacagag-tttgct----ctggctttaaacggggctccccgcaagtgggcggtgggattg 44976196  T

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Target: chr2; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 361 - 450
Target Start/End: Original strand, 32845089 - 32845178
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| |||||||||||||| |||  |||||||||||||||| ||||||||  || |||||| ||| |||||||| |||||||||||||||    
T  32845089 catttggggttggcctagtagttagcttgggatcttggagtttgctcctccaaaagtttcaggttcgattccctctggtgccaatttcgg 32845178  T

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Target: chr2; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 394 - 563
Target Start/End: Original strand, 35171831 - 35171996
Alignment:
Q  394 cttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgctttggctggcttagaac 492  Q
    |||||||| ||||||||   |||| ||| ||| |||||||| |||  |||||||||| || | || |||||||||||||| |||    |||||||  |||    
T  35171831 cttggagtttgctcctccagaggtctcaggttcgattccctctggcaccaatttcggtgggctaagtccatacagagctt-gct----ctggctttaaac 35171925  T
Q  493 gaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    | ||||||||||||||||||| ||||||||| | |||| |||||||| | |||| ||||||||||||||||    
T  35171926 ggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttt 35171996  T

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Target: chr2; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 356 - 563
Target Start/End: Original strand, 24195997 - 24196198
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| ||||||||||||||||||| |||||||| |||| ||  |||||||   |||||||| ||| |||||||| |||||| |||||||| || |    
T  24195997 taacccatttggggttggcctagtggttggcttgggattttggggttcgctcctccagaggtttcaggttcgattccctctggtgcaaatttcggtgggc 24196096  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || |||||||||| | |||||    |||||||  |||  || |||||||||||||||| ||||||||| | |||| |||||||| |  || ||| ||||    
T  24196097 taagtccatacagaac-ttgct----ctggctttaaac--gggccccgcaagtgggcggtgggattggtcccctcggattagtcgattttttgattggat 24196189  T
Q  555 accgagttt 563  Q
    |||||||||    
T  24196190 accgagttt 24196198  T

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Target: chr2; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 559
Target Start/End: Original strand, 5394034 - 5394209
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgcttt 478  Q
    ||||| |||| ||||||||||| ||||||||  ||||| ||| ||| |||||||| ||||| ||||||||  || | || ||||||||||| ||||||      
T  5394034 ggttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcgatgggctaagtccatacagag-tttgct-- 5394130  T
Q  479 ggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
      ||| |||  || | |||| |||||||||||||| ||||||||| |  ||| |||||||||||||| |||||||||||||    
T  5394131 --ctgactttaaatggggccgccgcaagtgggcggtgggattggtccgttcggattagtcggtccttagatcggataccga 5394209  T

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Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 27269549 - 27269470
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtg 440  Q
    |||| ||||||||| ||||||||| ||||||||||| |||| ||||||||| ||||||| | |||||||||||| |||||    
T  27269549 catttggggttggcatagtggttggcttgggatcttcgagtttgctcctctaaaggttttaggtttgattccctctggtg 27269470  T

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Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 40591188 - 40591290
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacag 467  Q
    ||||| |||| | |||| |||| |||||||||||||||||||||||| || ||| |||||||| | | ||||| ||||||||| || ||| |||||||||    
T  40591188 ggttgacctaatagttggcttgagatcttggagtgtgctcctctcaaagtctcaggtttgatttcttctggtggcaatttcggtgggcaagtccatacag 40591287  T
Q  468 agc 470  Q
    |||    
T  40591288 agc 40591290  T

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Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 472
Target Start/End: Complemental strand, 10582174 - 10582077
Alignment:
Q  376 tagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctt 472  Q
    ||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || ||||||||||||||    
T  10582174 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt 10582077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 559
Target Start/End: Complemental strand, 18976521 - 18976460
Alignment:
Q  498 ccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    |||||||||||||||| ||||||||| | ||||||||||||| | |||||||||||||||||    
T  18976521 ccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccga 18976460  T

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Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 367 - 480
Target Start/End: Complemental strand, 26176389 - 26176277
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccataca 466  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||||||||| |||  || ||||| |  |||||||||||| || || | | ||||||||    
T  26176389 gggttggcctggtg-ttgacttgggaccttggggtgtgctcctctcaaggtctcagattcgattctccctggtgccaattttggtggcctagtccataca 26176291  T
Q  467 gagctttgctttgg 480  Q
    || |||||||||||    
T  26176290 gacctttgctttgg 26176277  T

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Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 36421951 - 36422028
Alignment:
Q  282 tatttgattattttttgg-acaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaattaa 358  Q
    |||||||| ||||||||| | || ||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||    
T  36421951 tatttgatcattttttgggataaattacatgaataatactataaagtataaataaacatatatttaatataaaattaa 36422028  T

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Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 376 - 476
Target Start/End: Original strand, 18708490 - 18708590
Alignment:
Q  376 tagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgc 475  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||| ||| || ||||| || | |||||||| | || ||  | |||||||||||||||    
T  18708490 tagtggttgaattgggatcttggagtgtgttcctctcaaggtctcaggttcgactccctctgataccaatttcagtgggcatgttcatacagagctttgc 18708589  T
Q  476 t 476  Q
    |    
T  18708590 t 18708590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 373 - 472
Target Start/End: Original strand, 27290598 - 27290698
Alignment:
Q  373 gcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagct 471  Q
    |||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| ||||||||  |||||||||||||| || | || |||||||||||||    
T  27290598 gcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcccttcggtgccaatttcggtgggctaagtccatacagagct 27290697  T
Q  472 t 472  Q
    |    
T  27290698 t 27290698  T

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Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 367 - 447
Target Start/End: Complemental strand, 34041655 - 34041572
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||||||||||||||  |||||| ||||||  ||||||||||||| ||||||| ||| |||||||||||| ||||||||||||    
T  34041655 gggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtttgattccctctggtgccaattt 34041572  T

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Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 369 - 448
Target Start/End: Original strand, 14946785 - 14946864
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttc 448  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||||||||| | ||| ||||  || ||||| |||||||    
T  14946785 gttggcctagtggttgacttgagatcttgaagtttgctcctctcaaggttttaggttcgattttctctggtgtcaatttc 14946864  T

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Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 427 - 559
Target Start/End: Original strand, 19174827 - 19174954
Alignment:
Q  427 gattccctatggtgccaatttcggcggacaactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgct 526  Q
    |||||| | ||||||||||||||| ||  |  ||||||||||||||||||    |||||||||||||  ||||| | || ||||||| ||||||| | |     
T  19174827 gattccttctggtgccaatttcggtgggtaggtccatacagagctttgct----ctggcttagaacggagcccc-gtaaatgggcggtgggattgatccc 19174921  T
Q  527 ctcgaattagtcggtccttggatcggataccga 559  Q
    |||| |||| |||||||||||||||||||||||    
T  19174922 ctcggattaatcggtccttggatcggataccga 19174954  T

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Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 32526290 - 32526211
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccct 434  Q
    ||||| |||| || |||||| |||||||||| ||||||||||| ||| ||||||||||||||| ||| ||| ||||||||    
T  32526290 ttaacccatttggagttggcttagtggttgatttgggatcttgaagtttgctcctctcaaggtctcaggttcgattccct 32526211  T

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Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 36390765 - 36390570
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||||||||||||||  |||||||||  |||| |||| |||  ||||| ||| ||| |||| ||| ||||||||||||||| |||| || |    
T  36390765 catttggggttggcctagtggttggtttgggatct--gagtttgcttctccaaaggtctcaggttcgatttcctctggtgccaatttcggtggactaagt 36390668  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||| ||| |||||    ||| |||  || | | ||||||||||||||||| ||||||||| | |||| || ||||| | |||| ||||||||||||    
T  36390667 ccatacaaagc-ttgct----ctgactttaaatgggacccccgcaagtgggcggtgggattggt-ccctcggatcagtcgatacttgaatcggataccga 36390574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 563
Target Start/End: Complemental strand, 2140553 - 2140487
Alignment:
Q  497 cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||||||| ||||||||| | |||| |||||||| |  ||||||||||||||||||||    
T  2140553 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagttt 2140487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 7893242 - 7893318
Alignment:
Q  280 gatatttgattattttttggacaagttac---atgtataatactataaagtacaaacaaacttatatttaatataaa 353  Q
    ||||||||||||||||||| |||| |||    ||  |||||||||||||||| ||||||||||||||||||||||||    
T  7893242 gatatttgattattttttgaacaaattagtatattaataatactataaagtataaacaaacttatatttaatataaa 7893318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 395 - 555
Target Start/End: Complemental strand, 8024835 - 8024679
Alignment:
Q  395 ttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttggctggcttagaacga 494  Q
    |||||||||| | |||||||||||||||||| |||| ||| |  |||||||||||  ||  || ||||||||||  ||||  |||  || |||||||||     
T  8024835 ttggagtgtgtttctctcaaggtttcaagttcgatttccttttatgccaatttcgatgggtaaatccatacagaattttg--ttg--tgacttagaacgg 8024740  T
Q  495 ggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggata 555  Q
    ||||  |||||||||  || | ||||||| ||||| ||||||||||||||||||| |||||    
T  8024739 ggccgtcgcaagtggatggtgagattggtcctctcaaattagtcggtccttggattggata 8024679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 563
Target Start/End: Original strand, 18692090 - 18692156
Alignment:
Q  497 cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||| ||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  18692090 cccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagttt 18692156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 455
Target Start/End: Complemental strand, 18976624 - 18976531
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| | | ||||||||||| ||||    
T  18976624 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctct-gagccaatttcggtggac 18976531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 401 - 475
Target Start/End: Original strand, 30943134 - 30943208
Alignment:
Q  401 tgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgc 475  Q
    ||||||||||||||||| ||||||||||||| || |  |||||||||||| || | | |||||||||||||||||    
T  30943134 tgtgctcctctcaaggtctcaagtttgattctctcttatgccaatttcggtgggctagtccatacagagctttgc 30943208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 563
Target Start/End: Complemental strand, 44929913 - 44929847
Alignment:
Q  497 cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||| ||| ||||||||| | || |||||||||| | |||||||||||||||||||||    
T  44929913 cccccgcaagtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagttt 44929847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 369 - 563
Target Start/End: Original strand, 12543150 - 12543339
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacaga 468  Q
    |||| ||||||||||  |||||||||||||| |||||| |   |||||| | |  || ||||  || | |||||||||| || || ||| ||||||||||    
T  12543150 gttgacctagtggttagcttgggatcttggaatgtgctacatacaaggtctgagattcgattttctctagtgccaattttggtgggcaagtccatacaga 12543249  T
Q  469 gctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||    || | |||||| | |||||||||||||||  || ||||||| | | || ||||||||||||||||| |||||| |||||||||    
T  12543250 gctttgct----ctagtttagaaag-ggcccccgcaagtggatggtgggattgctccccttgaattagtcggtccttgaatcggagaccgagttt 12543339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 495 - 563
Target Start/End: Original strand, 31778159 - 31778227
Alignment:
Q  495 ggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||||| ||| | ||||||| |||||  ||||||| || |||||||||||||||||||||    
T  31778159 ggcccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagttt 31778227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 495 - 563
Target Start/End: Complemental strand, 34516483 - 34516415
Alignment:
Q  495 ggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||| |||||||||||| ||||||||| | |||| |||||||| | ||||||||||||||| |||||    
T  34516483 ggcccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttt 34516415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 350 - 450
Target Start/End: Original strand, 41313979 - 41314079
Alignment:
Q  350 taaaattaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcg 449  Q
    |||| ||||| |||| ||||||| | |||||||||  ||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||| ||||||||    
T  41313979 taaacttaacccatttggggttgccgtagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcg 41314078  T
Q  450 g 450  Q
    |    
T  41314079 g 41314079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 355 - 417
Target Start/End: Original strand, 20297555 - 20297618
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatc-ttggagtgtgctcctctcaaggt 417  Q
    ||||| |||| |||||||||| |||||||| ||||||||| ||||| |||||||||||||||||    
T  20297555 ttaacccatttggggttggcccagtggttggcttgggatctttggaatgtgctcctctcaaggt 20297618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 25293272 - 25293355
Alignment:
Q  481 ctggcttagaacgaggcccc-cgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| |||||| ||||||||||||  ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  25293272 ctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagttt 25293355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 496 - 563
Target Start/End: Complemental strand, 43374398 - 43374331
Alignment:
Q  496 gcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||| |||| ||||||||| |  ||| |||||||| | |||||||||||||||||||||    
T  43374398 gcccccgcaagtgagcggtgggattggtcccttcggattagtcgattcttggatcggataccgagttt 43374331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 466
Target Start/End: Complemental strand, 19525576 - 19525490
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccataca 466  Q
    ||||| |||||||||||| |||||| | |||||||| | ||| ||| |||||||| |||||||||||| || || ||| ||||||||    
T  19525576 ggttggcttgggatcttgaagtgtgtttctctcaagatctcaggttcgattccctctggtgccaattttggtgggcaagtccataca 19525490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 433
Target Start/End: Complemental strand, 43964033 - 43963987
Alignment:
Q  387 ttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccc 433  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||    
T  43964033 ttgggaccttggagtgtgctcctctcaaggtctcatgtttgattccc 43963987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 45709798 - 45709856
Alignment:
Q  282 tatttgattattttttggacaagttacatgtataatactataaagtacaaacaaactta 340  Q
    ||||||||||||||| |||||| ||| | | |||||||||||||||| |||||||||||    
T  45709798 tatttgattatttttaggacaaattataagaataatactataaagtataaacaaactta 45709856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 4567636 - 4567524
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctca-aggtttcaagtttgattccctatggtgccaatttcggcggac-aac 458  Q
    |||| |||||||||||||| |||| |||||||||||| ||| ||||||| ||| | || ||| ||| |||| ||| ||||||||||||||| || | ||     
T  4567636 catttggggttggcctagtagttggcttgggatcttgaagtttgctcct-tcagaagtctcaggttcgatttcctctggtgccaatttcggtgggctaaa 4567538  T
Q  459 tccatacagagctt 472  Q
    ||||||||||||||    
T  4567537 tccatacagagctt 4567524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 418
Target Start/End: Complemental strand, 6007080 - 6007031
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtt 418  Q
    ||||| || ||||||||||||| ||||||||||||||| |||||||||||    
T  6007080 gttggtctggtggttgacttggaatcttggagtgtgcttctctcaaggtt 6007031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 432
Target Start/End: Original strand, 7250260 - 7250305
Alignment:
Q  387 ttgggatcttggagtgtgctcctctcaaggtttcaagtttgattcc 432  Q
    |||||| |||||||||||||||||||||| | ||||||||||||||    
T  7250260 ttgggaccttggagtgtgctcctctcaagatctcaagtttgattcc 7250305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 434
Target Start/End: Original strand, 18691976 - 18692053
Alignment:
Q  357 aactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccct 434  Q
    |||||||| |||||||||||| |||||  ||||| || ||||||||||||| ||||||| | ||| ||| ||||||||    
T  18691976 aactcatttggggttggcctaatggtttgcttggaattttggagtgtgctcatctcaagatctcaggttcgattccct 18692053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 430
Target Start/End: Original strand, 18825366 - 18825415
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgatt 430  Q
    |||| ||||||| || ||||||||||||||||||||| ||||||||||||    
T  18825366 gttggcttgggacctaggagtgtgctcctctcaaggtctcaagtttgatt 18825415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 557
Target Start/End: Complemental strand, 36242492 - 36242319
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgcttt 478  Q
    ||||| |||||||||||| | | ||||||||   |||| ||| ||| |||||||| ||||| ||||||||| || | || ||||  |||||||| |||      
T  36242492 ggttggcttgggatcttgaaatttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccagccagagctt-gct-- 36242396  T
Q  479 ggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggatacc 557  Q
      |||||||  |||| || |||||||||||||||| ||||||||| | |||| |||| ||| | |||||||||||||||    
T  36242395 --ctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggatacc 36242319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 499 - 563
Target Start/End: Complemental strand, 27269409 - 27269345
Alignment:
Q  499 cccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||||| ||||||| | | |||| |||||||| | ||||||| |||||||||||||    
T  27269409 cccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggataggataccgagttt 27269345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 495 - 563
Target Start/End: Original strand, 44610167 - 44610235
Alignment:
Q  495 ggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||| |||||||||||| ||||||||| |  ||| |||||||||| |||||| || |||||||||||    
T  44610167 ggcccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttggaccgaataccgagttt 44610235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 6099570 - 6099519
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattc 431  Q
    ||||| ||||||| |||||||||||||||||||||||| ||| ||| |||||    
T  6099570 ggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattc 6099519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 309
Target Start/End: Original strand, 33803351 - 33803474
Alignment:
Q  186 cataatagtcaatcccggataatggtgtgtagcggttgaccctaaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatt 285  Q
    |||| ||| ||||| |||||| |||||||||||||  ||||  |||||| |||||| |||||  | |||||| |||||| ||||||||  |||| |||||    
T  33803351 catagtagccaatctcggatagtggtgtgtagcggccgacctcaaaagtaggatagcaggatcacgtatagcagtatgacaaataacggtcatttatatt 33803450  T
Q  286 tgattattttttggacaagttaca 309  Q
    | ||| | ||||||| || |||||    
T  33803451 ttattttattttggataaattaca 33803474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 309
Target Start/End: Original strand, 33807833 - 33807956
Alignment:
Q  186 cataatagtcaatcccggataatggtgtgtagcggttgaccctaaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatt 285  Q
    |||| ||| ||||| |||||| |||||||||||||  ||||  |||||| |||||| |||||  | |||||| |||||| ||||||||  |||| |||||    
T  33807833 catagtagccaatctcggatagtggtgtgtagcggccgacctcaaaagtaggatagcaggatcacgtatagcagtatgacaaataacggtcatttatatt 33807932  T
Q  286 tgattattttttggacaagttaca 309  Q
    | ||| | ||||||| || |||||    
T  33807933 ttattttattttggataaattaca 33807956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 563
Target Start/End: Original strand, 39957891 - 39957954
Alignment:
Q  500 ccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||||  ||||||||| | |||| |||||||| | ||||||| |||||||||||||    
T  39957891 ccgcaagtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagttt 39957954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 410
Target Start/End: Complemental strand, 40997535 - 40997500
Alignment:
Q  375 ctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    ||||||||||||||||||||||||||| ||||||||    
T  40997535 ctagtggttgacttgggatcttggagtttgctcctc 40997500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 450
Target Start/End: Complemental strand, 43374505 - 43374435
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctca-aggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    ||||| |||||||||||||||| ||||||| ||| |||| ||| ||| |||||||| |||||||||||||||    
T  43374505 ggttggcttgggatcttggagtttgctcct-tcagaggtctcaggttcgattccctctggtgccaatttcgg 43374435  T

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Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 3943854 - 3943936
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| ||| |||||||||||| || ||||||||| | || | ||||||||||  |||||||||||||| |||||    
T  3943854 ctggctttaaacggggctcccgcaagtgggtggtgggattggtccccttggattagtcggttattggatcggataccaagttt 3943936  T

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Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 17315955 - 17316021
Alignment:
Q  292 ttttttggacaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaattaa 358  Q
    |||||| ||||| |||| |  ||||||||||||| || |||||||| ||||| ||||||||||||||    
T  17315955 tttttttgacaaattacgtaaataatactataaattataaacaaacatatatctaatataaaattaa 17316021  T

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Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 382 - 434
Target Start/End: Original strand, 10449048 - 10449101
Alignment:
Q  382 ttgacttgggatcttggagtgtgctcct-ctcaaggtttcaagtttgattccct 434  Q
    |||||||| ||||| ||||||||||||| |||||||||||| ||| ||||||||    
T  10449048 ttgacttgtgatctaggagtgtgctcctcctcaaggtttcatgttcgattccct 10449101  T

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Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 534 - 563
Target Start/End: Original strand, 31175720 - 31175749
Alignment:
Q  534 tagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||||||||||||||||||||    
T  31175720 tagtcggtccttggatcggataccgagttt 31175749  T

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Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 380 - 417
Target Start/End: Original strand, 38341754 - 38341791
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggt 417  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  38341754 ggttgacttgggatcttgaagtttgctcctctcaaggt 38341791  T

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Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 380 - 472
Target Start/End: Original strand, 45271401 - 45271494
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctt 472  Q
    ||||| ||||||||||| |||| |||| |||   |||||||| ||| |||||||| ||||||||||||| | || | || ||||||||||||||    
T  45271401 ggttggcttgggatcttagagtttgcttctccagaggtttcatgttcgattccctctggtgccaatttcagtgggctaagtccatacagagctt 45271494  T

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Target: chr5 (Bit Score: 98; Significance: 8e-48; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 19145610 - 19145413
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  ||| |||||||| ||||||||||||||| || ||| ||    
T  19145610 catttggggttggcctagtggttgacttgggatcttggagtatgctcctctcaaggtctccggttcgattccctctggtgccaatttcggtgggcaagtc 19145511  T
Q  461 catacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgag 560  Q
    ||||||||||||||||    |||||||  || | | ||||||||||||||||| ||||||||| | |||| |||||| ||| ||||||||||||||||||    
T  19145510 catacagagctttgct----ctggctttaaatg-gtcccccgcaagtgggcggtgggattggtcccctcggattagttggttcttggatcggataccgag 19145416  T

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Target: chr5; HSP #2
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 386 - 563
Target Start/End: Original strand, 36895448 - 36895621
Alignment:
Q  386 cttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttggctggc 485  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| |||| |||||||||| || ||| |||||||| |||||||||    |||||    
T  36895448 cttgggatcttggagtgtgctcctctcaaggtttcatgttcgattccctctggtaccaatttcggtggtcaagtccatacaaagctttgct----ctggc 36895543  T
Q  486 ttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||  ||| |||||||||||||| ||||||| |   ||||||||||||||| |||||||||||||||||||||    
T  36895544 ttagaacgtagccgccgcaagtgggcggggggattgttctcctcgaattagtcggttcttggatcggataccgagttt 36895621  T

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Target: chr5; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 356 - 563
Target Start/End: Complemental strand, 32059644 - 32059441
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||  ||||| ||| ||| |||||| | ||||||||||||||| || |    
T  32059644 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggc 32059545  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || |||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||||||||||||||||||    
T  32059544 taagtccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggat 32059450  T
Q  555 accgagttt 563  Q
    |||||||||    
T  32059449 accgagttt 32059441  T

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Target: chr5; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 8484860 - 8484662
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| |||||||||||| ||||||||||||||| || | || |    
T  8484860 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaatttcggtgggctaagt 8484761  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
     |||||||||| |||||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  8484760 tcatacagagc-ttgct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 8484666  T

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Target: chr5; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 355 - 563
Target Start/End: Complemental strand, 27498936 - 27498732
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    ||||| |||| ||||||| ||||||||||| ||||| |||||||||| |||||||||  |||| ||| ||| |||||||| ||||||||||||||| ||     
T  27498936 ttaacccatttggggttgacctagtggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtggg 27498837  T
Q  455 c-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
    | || |||||||| ||| |||||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||    
T  27498836 ctaagtccatacatagc-ttgct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgga 27498742  T
Q  554 taccgagttt 563  Q
    ||||||||||    
T  27498741 taccgagttt 27498732  T

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Target: chr5; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 367 - 563
Target Start/End: Complemental strand, 31288139 - 31287947
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg-cggacaactccatac 465  Q
    |||||||||||||||||| |||||||||||||||| ||||||||  ||||| ||| ||| |||||||| |||||||||||||||  ||  || |||||||    
T  31288139 gggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttggtgccaatttcggtgggttaagtccatac 31288040  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    | ||| |||||||| ||   ||| |||| ||||||||||||||||||| |||||||||   ||||||||||||||| |||||| ||||||||||||||    
T  31288039 aaagc-ttgctttgact---tta-aacggggcccccgcaagtgggcggtgggattggtctcctcgaattagtcggttcttggaccggataccgagttt 31287947  T

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Target: chr5; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 4603775 - 4603973
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||  ||| | ||||||| |||||| | ||||||||||||||  || | || |    
T  4603775 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattccttctggtgccaatttcgatgggctaagt 4603874  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| | |||    |||||||  |||| |||||| |||||||| ||| ||||||||| | |||| ||||||||||||||||||||||||||||    
T  4603875 ccatacagagc-tcgct----ctggctttaaacggggcccctgcaagtggacggtgggattggtcccctcggattagtcggtccttggatcggataccga 4603969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 355 - 563
Target Start/End: Complemental strand, 11926707 - 11926502
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    ||||| |||| |||||||||||||||||||  ||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| ||     
T  11926707 ttaacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccctctggtgccaatttcggtggg 11926608  T
Q  455 c-aactccatacagagctttgctttggctggcttagaacgagg-cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgg 552  Q
    | || |||||||||||| |||||    |||||||  |||| || |||||||||||||| || ||||||||| | |||| |||||||| | ||||||||||    
T  11926607 ctaagtccatacagagc-ttgct----ctggctttaaacggggccccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttggatcgg 11926513  T
Q  553 ataccgagttt 563  Q
    |||||||||||    
T  11926512 ataccgagttt 11926502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 366 - 559
Target Start/End: Original strand, 38684211 - 38684399
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccata 464  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || ||||||    
T  38684211 ggggttggcccagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccata 38684310  T
Q  465 cagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    |||||| |||||    |||||||  |||| |||||||||||||| |||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  38684311 cagagc-ttgct----ctggctttaaacg-ggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccga 38684399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 356 - 563
Target Start/End: Complemental strand, 15641309 - 15641107
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| |||||| |||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||| ||||||||||| || |    
T  15641309 taacccatttggggttagcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggc 15641210  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || |||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | ||| ||||||||    
T  15641209 taagtccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggat 15641116  T
Q  555 accgagttt 563  Q
    |||||||||    
T  15641115 accgagttt 15641107  T

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Target: chr5; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 367 - 563
Target Start/End: Complemental strand, 33709694 - 33709504
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatac 465  Q
    |||||||||||||||||| |||||||||||||||| ||||||||   |||| ||||||| |||||||| ||||||||||||||| || | || |||||||    
T  33709694 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctaagtccatac 33709595  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||    |||    |||||||  |||| | ||||| ||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||| ||||    
T  33709594 agag---agct----ctggctttaaacgggacccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgtgttt 33709504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 194 - 358
Target Start/End: Original strand, 30874529 - 30874694
Alignment:
Q  194 tcaatcccggataatggtgtgtagcggttgaccctaaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatttgattatt 293  Q
    ||||||||||||| ||||| |||| ||  || || |||| |||||||    |||||| ||| || |||||| ||||||||| ||  ||||||||||| ||    
T  30874529 tcaatcccggatagtggtgcgtagtggccgatcccaaaaatgggataatgagatagcgtattgcagtatgacaaataacgatcaccgatatttgattgtt 30874628  T
Q  294 -ttttggacaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaattaa 358  Q
     |||||||||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  30874629 attttggacaaattacatgaataatactataaagtataaacaaacatatatttaatataaaattaa 30874694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 387 - 563
Target Start/End: Original strand, 18207231 - 18207403
Alignment:
Q  387 ttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgctttggctggc 485  Q
    ||||||||||||||| ||||||||   |||| ||| ||| ||||||||  |||||||||||||| || | || ||||||||||||||    ||  |||||    
T  18207231 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttg---tt--ctggc 18207325  T
Q  486 ttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||  |||||||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  18207326 tttaaacgaggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 18207403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 30485826 - 30486024
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctca-aggtttcaagtttgattccctatggtgccaatttcggcggac-aac 458  Q
    |||| |||||||||| || ||||| |||||||||||||||| ||||||| ||| |||| ||| ||| ||||| || ||||| ||||||||| || | ||     
T  30485826 catttggggttggcccagcggttggcttgggatcttggagtttgctcct-tcagaggtctcaggttcgattcactctggtgtcaatttcggtgggctaag 30485924  T
Q  459 tccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccg 558  Q
    |||||||||||||| |||    |||||||  ||||| |||||||||||||||||| ||||||||| | |||| |||||||  | ||||||||||||||||    
T  30485925 tccatacagagctt-gct----ctggctttaaacgatgcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttggatcggataccg 30486019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 34310140 - 34310338
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||| | ||||| |||||||||| ||||||||   |||| ||| ||| |||||||| |||||||||||| || || | || |    
T  34310140 catttggggttggcctagtggtcggcttggaatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttggtgggctaagt 34310239  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||    |||||||  |||| | |||||  |||||| ||| ||||||||| | ||||||||| ||| | |||||||||||||||||    
T  34310240 ccatacagagc-ttgct----ctggctttaaacgggacccccataagtggacggtgggattggtcccctcgaattaatcgattcttggatcggataccga 34310334  T

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Target: chr5; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 366 - 563
Target Start/End: Complemental strand, 10869759 - 10869566
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccata 464  Q
    ||||||||| | |||||||||||| ||||||||||| ||||||||  ||||| ||| ||| |||||| | |||| |||||||||| || | || |||| |    
T  10869759 ggggttggcatggtggttgacttgcgatcttggagtttgctcctccaaaggtctcaggttcgattccatctggttccaatttcggtgggctaagtccaca 10869660  T
Q  465 cagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    | |||||| |||    |||||||  || | |||| |||||||||||||| ||||||||| | |||| |||||||||| ||||||||||||||| |||||    
T  10869659 ctgagctt-gct----ctggctttaaatggggcctccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccaagttt 10869566  T

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Target: chr5; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 23270721 - 23270523
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||| ||  ||||| ||||||| |||| |||  | |||||||||||| || | || |    
T  23270721 catttggggttggcctagtggttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatttcctccgatgccaatttcggtgggctaagt 23270622  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||||||||   ||| ||||  |||||||||| ||| ||| ||||||||| | |||| |||||| | | ||||||| ||||||| |    
T  23270621 ccatacagagc-ttgctttggct---tta-aacggagcccccgcaaatggacggtgggattggtcccctcggattagttgattcttggattggataccaa 23270527  T

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Target: chr5; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 27487754 - 27487555
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||||||||||||||| ||||||| ||||||| ||||| ||   |||| ||| ||||||| || | ||||||||||||||| |||| || |    
T  27487754 catttggggttggcctagtggttgatttgggattttggagtttgctcttccagaggtctcaggtttgatcccatttggtgccaatttcggtggactaagt 27487655  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| ||||| | |||   ||| |  | |||||  |||||||||||| ||||||||| | |||| |||||||| | |||||||||||||| ||    
T  27487654 ccatacagagc-ttgctctagct---ttaaacgggggcccttgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacaga 27487559  T

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Target: chr5; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 380 - 563
Target Start/End: Complemental strand, 12398628 - 12398449
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgcttt 478  Q
    ||||| |||||||||||||||| ||||||||  ||||| ||| ||| |||||||||||||| ||||||||| || | || | |||||||||| |||||      
T  12398628 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgtcaatttcggtggcctaagttcatacagagc-ttgct-- 12398532  T
Q  479 ggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
      |||||||  || | ||||||||||| ||| ||| | ||||| | ||||| ||||||||||| ||||||| |||||||||||||    
T  12398531 --ctggctttaaatggggcccccgcaaatggacggtgagattgatcctctcaaattagtcggttcttggattggataccgagttt 12398449  T

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Target: chr5; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 380 - 563
Target Start/End: Complemental strand, 19456389 - 19456212
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgcttt 478  Q
    ||||| |||||||||||||||| ||||||||   |||| ||| ||| ||| |||| ||||||||||||||| || | || |||||||||||||| |||      
T  19456389 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgat-ccctctggtgccaatttcggtgggctaagtccatacagagctt-gct-- 19456294  T
Q  479 ggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
      |||||||  |||| |||||| |||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  19456293 --ctggctttaaacggggcccc-gcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 19456212  T

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Target: chr5; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 930684 - 930487
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccc-tatggtgccaatttcggcggacaact 459  Q
    |||| |||||||||| |||||||| |||| ||| || |||| |||||||||||| || ||| ||| |||||||   ||||||||||||||| |||||| |    
T  930684 catttggggttggcccagtggttggcttgagattttagagtttgctcctctcaaagtctcaggttcgattcccacttggtgccaatttcggtggacaaat 930585  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
     |||||| ||| |||||    | |||||||||| | |||| ||||||||| | | | ||||||| | |||| |||||||||||||||||||||||| |||    
T  930584 tcatacatagc-ttgct----ccggcttagaac-aagccctcgcaagtggacagtgtgattggtcccctcggattagtcggtccttggatcggatatcga 930491  T

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Target: chr5; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 361 - 482
Target Start/End: Original strand, 36954816 - 36954937
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcg-gacaact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||||||||  |||| ||| ||| |||||||| |||| | |||||||||| |  || |    
T  36954816 catttggggttggcctagtggttgccttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggttctaatttcggcgtgctaagt 36954915  T
Q  460 ccatacagagctttgctttggct 482  Q
    |||||||||| ||||||||||||    
T  36954916 ccatacagag-tttgctttggct 36954937  T

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Target: chr5; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 375 - 476
Target Start/End: Complemental strand, 14302884 - 14302783
Alignment:
Q  375 ctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttg 474  Q
    |||||||||||||||||||||| ||||||||| ||||  |||| ||| |||||||| | | ||||| |||||| ||||||||| |||||| |||||||||    
T  14302884 ctagtggttgacttgggatcttagagtgtgcttctctagaggtctcaggtttgatttcatttggtgtcaattttggcggacaagtccatatagagctttg 14302785  T
Q  475 ct 476  Q
    ||    
T  14302784 ct 14302783  T

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Target: chr5; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 472
Target Start/End: Original strand, 25586930 - 25587042
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||| ||| ||||||||||||||| || | || |    
T  25586930 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggctaagt 25587029  T
Q  460 ccatacagagctt 472  Q
    |||||||||||||    
T  25587030 ccatacagagctt 25587042  T

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Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 7085825 - 7085627
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||| |||| ||||||||| |||||||||||||||| | ||||||   |||| ||  ||| |||||||| | ||| ||||||||| || | || |    
T  7085825 catttggggctggcttagtggttggcttgggatcttggagttttctcctccagaggtctccggttcgattccctctagtgtcaatttcggtgggctaagt 7085726  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    ||| |||  |||| || |||||||||||||||| ||||||||| | |||| |||||||| | |||| ||||||||||||    
T  7085725 ccatacagagctt-gct----ctgactttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccga 7085631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 356 - 556
Target Start/End: Complemental strand, 13038658 - 13038463
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| |||||||||||||||||||  ||||||||||||||| ||||||||   |||| ||| ||| |||||||| |||||||||||| |  || |    
T  13038658 taacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattttgatgggc 13038559  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || | ||||||||||        |  ||||||  |||| ||||||||||||||||||| ||||||| | | ||||||||||||| | ||||||||||||    
T  13038558 taagttcatacagagc------aagtatggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggat 13038465  T

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Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 356 - 556
Target Start/End: Complemental strand, 13108653 - 13108458
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||   || | ||| ||| |||||||| |||||||||||| |  || |    
T  13108653 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaattttgatgggc 13108554  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || | ||||||||||        | ||| |||  |||| ||||||||||||||||||| ||||||| | | ||||||||||||| | ||||||||||||    
T  13108553 taagttcatacagagc------aagtctgcctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggat 13108460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 481 - 559
Target Start/End: Original strand, 35425127 - 35425205
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    |||||||  |||| ||||||||||||||||||| ||||||||| |||||| |||||||| | |||||||||||||||||    
T  35425127 ctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggattagtcgattcttggatcggataccga 35425205  T

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Target: chr5; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 490 - 563
Target Start/End: Original strand, 22693058 - 22693131
Alignment:
Q  490 aacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  22693058 aacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 22693131  T

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Target: chr5; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 33025473 - 33025550
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccc 433  Q
    |||| |||| ||||||||||| | ||||| |||||||||||||||||||||||||||||| | |||| ||||||||||    
T  33025473 taacccatttggggttggcctcgcggttggcttgggatcttggagtgtgctcctctcaagatctcaactttgattccc 33025550  T

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Target: chr5; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 25750810 - 25750719
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttg--attccctatggtgccaatttcgg 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||   |||| ||||||| |  ||||| | |||||||||||||||    
T  25750810 catttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaagttggatattccttctggtgccaatttcgg 25750719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 361 - 449
Target Start/End: Complemental strand, 38631160 - 38631072
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcg 449  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| |||  || |||||||| ||||||||||||||    
T  38631160 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaatttcg 38631072  T

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Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 356 - 430
Target Start/End: Original strand, 25343232 - 25343306
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgatt 430  Q
    |||| |||| ||||||||||||||||||||||||  |||||||| ||||||| | ||||||| ||||||||||||    
T  25343232 taacccatttggggttggcctagtggttgacttgaaatcttggattgtgctcttttcaaggtctcaagtttgatt 25343306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 494 - 563
Target Start/End: Complemental strand, 38631049 - 38630980
Alignment:
Q  494 aggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||||||||||| ||||||||| | |||| |||| ||| | |||||||||||||||||||||    
T  38631049 aggcccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagttt 38630980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 368 - 449
Target Start/End: Original strand, 40330638 - 40330719
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcg 449  Q
    ||||||| ||||||||  |||| ||||||||||| ||||||||||||||| |||||||  |||| ||||||||| |||||||    
T  40330638 ggttggcttagtggttagcttgagatcttggagtttgctcctctcaaggtctcaagttcaattctctatggtgctaatttcg 40330719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 367 - 563
Target Start/End: Complemental strand, 6014473 - 6014281
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatac 465  Q
    |||||||||||||| ||| |||||||||||||||| |||| |||   || | ||| ||| |||| | | ||||||||||||||| ||   || |||||||    
T  6014473 gggttggcctagtgattggcttgggatcttggagtttgcttctccagagatctcaggttcgattacttctggtgccaatttcggtgggttaagtccatac 6014374  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||| |||    |||||||  |||| || || ||||||||||||| | |||| || | ||||||||||||| | ||||||||||||| |||||||    
T  6014373 agagctt-gct----ctggctttaaacggggtccacgcaagtgggcggtgagattagtcccctcgaattagtcgattcttggatcggatatcgagttt 6014281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 367 - 559
Target Start/End: Complemental strand, 11465100 - 11464913
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatac 465  Q
    |||||||||||||| ||| ||||  |||||||||| ||||||||  || || ||| ||| |||| ||| |||||||||||| || || | || | |||||    
T  11465100 gggttggcctagtgattggcttgaaatcttggagtttgctcctccaaatgtctcaggttcgatttcctctggtgccaattttggtgggctaagttcatac 11465001  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    |||||||  ||    |||||||  |||| |||||| ||||||||| || ||||||||| | ||||||||||||| | |||||||||||||||||    
T  11465000 agagctta-ct----ctggctttaaacggggcccc-gcaagtgggtggtgggattggtcccctcgaattagtcgattcttggatcggataccga 11464913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 499 - 563
Target Start/End: Original strand, 37495186 - 37495250
Alignment:
Q  499 cccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  37495186 cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 37495250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 500 - 563
Target Start/End: Complemental strand, 41351168 - 41351105
Alignment:
Q  500 ccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  41351168 ccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 41351105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 369 - 555
Target Start/End: Original strand, 42193491 - 42193671
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacag 467  Q
    ||||||||||||||||||||||||||||||||| |||| | |   |||| ||| ||| |||| ||| || |||||||||||| || | || || ||||||    
T  42193491 gttggcctagtggttgacttgggatcttggagtttgcttccccagaggtctcaggttcgatttcctctgatgccaatttcggtgggctaagtctatacag 42193590  T
Q  468 agctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggata 555  Q
    || ||||||||||||   ||| |    || |||||||||||||||| ||| ||||| |||||| |||||||| | |||||||| ||||    
T  42193591 ag-tttgctttggct---ttaaa---tggaccccgcaagtgggcggtggggttggtcctctcggattagtcgattcttggatcagata 42193671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 368 - 430
Target Start/End: Original strand, 8780483 - 8780545
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgatt 430  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||||||| ||| ||| ||||    
T  8780483 ggttgacctagtggttgacatcggatcttggagtgtgctcctctcaaggtctcaggttcgatt 8780545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 470
Target Start/End: Original strand, 15931057 - 15931166
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctca-aggtttcaagtttgattccctatggtgccaatttcggcggacaact 459  Q
    |||| ||||||||||||||||||  |||||||||||||||| |||| || ||| | || ||| ||| |||||||| ||||||||||||||| ||  || |    
T  15931057 catttggggttggcctagtggttagcttgggatcttggagtttgcttct-tcacaagtctcaggttcgattccctctggtgccaatttcggtggctaagt 15931155  T
Q  460 ccatacagagc 470  Q
    |||||||||||    
T  15931156 ccatacagagc 15931166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 559
Target Start/End: Complemental strand, 24158249 - 24158171
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||| | |||||||||||| | ||||||| | |||  ||||||||||||||| ||||||||||||    
T  24158249 ctggcttagaacggggcctctgcaagtgggcggtgagattggtcccctcagattagtcggtccttgaatcggataccga 24158171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 12317349 - 12317260
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| ||||||||||||||||||| ||||| |||||||||| |||||||||  |||| ||  |||||||| | | ||||| |||||||||    
T  12317349 catttggggttggcctagtggttggcttggaatcttggagtttgctcctcttgaggtctcgggtttgatttcatctggtgtcaatttcgg 12317260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 361 - 433
Target Start/End: Complemental strand, 15485491 - 15485418
Alignment:
Q  361 cattaggggttggcctagtgg-ttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccc 433  Q
    |||| ||||||||||||| || ||| ||||||| |||||||||||||||||||||||| ||| ||| |||||||    
T  15485491 catttggggttggcctagcgggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattccc 15485418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 22392699 - 22392748
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  22392699 catttggggttggcctagtggttggcttgggatcttggagtttgctcctc 22392748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 354 - 450
Target Start/End: Complemental strand, 1827736 - 1827640
Alignment:
Q  354 attaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||| |||| ||||||| ||||||||||| |||| ||||||||||| ||||||||   |||| ||| ||| |||||||| || | ||||||||||    
T  1827736 attaacccatttggggttgacctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctgataccaatttcgg 1827640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 344
Target Start/End: Complemental strand, 37325854 - 37325795
Alignment:
Q  282 tatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatatt 344  Q
    |||||||||||||||||||||| |||||||   ||| |||||||||| |||||||||||||||    
T  37325854 tatttgattattttttggacaaattacatg---aattctataaagtataaacaaacttatatt 37325795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 1374847 - 1374736
Alignment:
Q  229 aaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatttgattattttttggacaagttacatgtataatactataaagta 328  Q
    |||||||||||||  || |||| ||||| ||||||| |||||  |  ||  ||||||||||||||||||| |||| ||||||| |||||  |||||| ||    
T  1374847 aaaagtgggatagcgggttagcgtatagtggtatgacaaatagtggtcaccgatatttgattattttttgaacaaattacatgaataatgttataaaata 1374748  T
Q  329 caaacaaactta 340  Q
     |||||||||||    
T  1374747 taaacaaactta 1374736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 2327476 - 2327539
Alignment:
Q  280 gatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatat 343  Q
    ||||||||||||||||||| |||| ||| ||| | ||| |||||||||| ||||||||||||||    
T  2327476 gatatttgattattttttgaacaaattagatgaaaaatgctataaagtataaacaaacttatat 2327539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 22392802 - 22392884
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| ||||||||||||||||||| || |||||| | |||  |||||||| |  ||||||||||||||||||||    
T  22392802 ctggctttaaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagttt 22392884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 563
Target Start/End: Complemental strand, 21236436 - 21236363
Alignment:
Q  490 aacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||| ||||||||||||||||||| |||||| || | |||  |||||||| | |||| ||||||||||||||||    
T  21236436 aacggggcccccgcaagtgggcggtgggattagtcccctcagattagtcgattcttgaatcggataccgagttt 21236363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 447
Target Start/End: Original strand, 37397716 - 37397797
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    |||||||| |||||||||| |||| ||||||||||| ||||||||  ||||| | | |||||||||||  ||||| ||||||    
T  37397716 ggggttggtctagtggttggcttgtgatcttggagtttgctcctccaaaggtctaaggtttgattccccctggtgtcaattt 37397797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 374 - 447
Target Start/End: Original strand, 37495058 - 37495131
Alignment:
Q  374 cctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||||||||| |||| ||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||    
T  37495058 cctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 37495131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 1375130 - 1375054
Alignment:
Q  282 tatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaattaa 358  Q
    |||||||| | ||||| ||||| |||| |  ||||||||||||| || |||||||| ||||| ||||||||||||||    
T  1375130 tatttgataacttttttgacaaattacgtaaataatactataaattataaacaaacatatatctaatataaaattaa 1375054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 3715103 - 3715059
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||    
T  3715103 ggggttggcctagtggttggtttgggatcttggagtttgctcctc 3715059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 381 - 417
Target Start/End: Complemental strand, 5943932 - 5943896
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggt 417  Q
    |||||||||||| ||||||||||||||||||||||||    
T  5943932 gttgacttgggaccttggagtgtgctcctctcaaggt 5943896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 369 - 449
Target Start/End: Original strand, 10399779 - 10399859
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcg 449  Q
    ||||| |||||||||||||| |||||||||||| |||| ||   ||| ||||| ||||||||| || ||| ||||||||||    
T  10399779 gttggtctagtggttgactttggatcttggagtttgcttcttcaaagatttcaggtttgattctctctggcgccaatttcg 10399859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 499 - 563
Target Start/End: Complemental strand, 25548599 - 25548535
Alignment:
Q  499 cccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||  |||| |||||||||  |||||||||||||| | ||||||||| |||||||||||    
T  25548599 cccgcaagtacgcggtgggattggtcatctcgaattagtcgattcttggatcgaataccgagttt 25548535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 367 - 410
Target Start/End: Complemental strand, 15971315 - 15971272
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||    
T  15971315 gggttggcttagtggttggcttgggatcttggagtttgctcctc 15971272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 354 - 417
Target Start/End: Complemental strand, 21042731 - 21042668
Alignment:
Q  354 attaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggt 417  Q
    ||||||||||| ||||||||  ||||| |||  ||||||||||||||| ||||||| |||||||    
T  21042731 attaactcatttggggttggtttagtgattggtttgggatcttggagtttgctcctttcaaggt 21042668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 369 - 415
Target Start/End: Complemental strand, 204215 - 204169
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaag 415  Q
    ||||| ||||||||||||||| ||||||||||| ||||| |||||||    
T  204215 gttggtctagtggttgacttgtgatcttggagtttgctcgtctcaag 204169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 376 - 434
Target Start/End: Complemental strand, 9585697 - 9585639
Alignment:
Q  376 tagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccct 434  Q
    |||| ||||| || ||||||||||||  |||||||||||| ||||| ||||||||||||    
T  9585697 tagttgttgatttaggatcttggagttcgctcctctcaagatttcaggtttgattccct 9585639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 497 - 559
Target Start/End: Complemental strand, 13659312 - 13659250
Alignment:
Q  497 cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||||||| ||||||| | | |||| |||| ||| | |||||||||||||||||    
T  13659312 cccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcggataccga 13659250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 37258412 - 37258350
Alignment:
Q  386 cttgggatcttggagtgtgctcct-ctcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    |||||||||| ||||||||||||| |||||||||||| ||| ||||| || ||||| ||||||    
T  37258412 cttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgtcaattt 37258350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 357 - 407
Target Start/End: Original strand, 42006787 - 42006837
Alignment:
Q  357 aactcattaggggttggcctagtggttgacttgggatcttggagtgtgctc 407  Q
    |||||||| |||||||| |||||||||| |||| ||||||||||| |||||    
T  42006787 aactcatttggggttgggctagtggttggcttgagatcttggagtttgctc 42006837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 431
Target Start/End: Complemental strand, 2499372 - 2499307
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattc 431  Q
    ||||||||| |||||| ||||||||||||||||| | ||||||| |||| || ||| ||| |||||    
T  2499372 ggggttggcttagtggctgacttgggatcttggaatttgctcctttcaaagtctcaggttcgattc 2499307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 369 - 410
Target Start/End: Original strand, 5067307 - 5067348
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    ||||| |||||||||||||||||||||| |||| ||||||||    
T  5067307 gttggtctagtggttgacttgggatcttcgagtttgctcctc 5067348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 483 - 563
Target Start/End: Complemental strand, 21377330 - 21377250
Alignment:
Q  483 ggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctc-gaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||| |||| | ||||||||| || | ||||||| ||||  | ||||||||||| ||||||||||||||||||||    
T  21377330 ggcttagaacggggcctctgcaagtgggtggtgagattggt-ctctttggattagtcggtctttggatcggataccgagttt 21377250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 34049820 - 34049869
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    |||| |||||||| ||||| |||| |||||||||||||||| ||||||||    
T  34049820 catttggggttgggctagtagttggcttgggatcttggagtttgctcctc 34049869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 37325929 - 37325872
Alignment:
Q  184 agcataatagtcaatcccggataatggtgtgtagcggttgaccctaaaagtgggatag 241  Q
    |||||| ||||||||||||||||  |||| |||||||  ||||| |||||||||||||    
T  37325929 agcatagtagtcaatcccggatagcggtgcgtagcggccgaccccaaaagtgggatag 37325872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 3e-41; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 361 - 556
Target Start/End: Complemental strand, 4252595 - 4252404
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| | |  ||| ||    
T  4252595 catttggggttggcctagtggttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgattccctctggtgccaatttcagtgatcaagtc 4252496  T
Q  461 catacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggatac 556  Q
    |||||| |||||| ||    |||| ||||||||   ||||| ||||||| ||| ||||||||| | |||| |||||||| ||||||||||||||||    
T  4252495 catacaaagctttact----ctggtttagaacggcccccccacaagtggacggtgggattggtcccctcggattagtcgatccttggatcggatac 4252404  T

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Target: chr3; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 48977386 - 48977584
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg-cggacaact 459  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||| ||| ||| |||||| | |||||||||||||||  ||  || |    
T  48977386 catttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggttaagt 48977485  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||    |||||||  |||| |||||| |||||||||||| ||||||||| | |||| ||||||||||||||||||||||||||||    
T  48977486 ccatacagagc-ttgct----ctggctttaaacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccga 48977580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 40133648 - 40133450
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||| ||||||| ||||||||  ||||| ||| ||| |||||||| ||||| ||||||||| || | || |    
T  40133648 catttggggttggcctagtggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagt 40133549  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | ||||||||||||| | |||||||||||||||||    
T  40133548 ccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccga 40133454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 356 - 559
Target Start/End: Original strand, 26158811 - 26159003
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    ||||||||| ||||||||||||   |||| |||| ||||||||||||||||||||||||||| ||| |||| ||||||| ||||||||||||||| ||      
T  26158811 taactcatttggggttggcctatgtgttggcttgagatcttggagtgtgctcctctcaaggtctcaggtttcattccctttggtgccaatttcggtgggt 26158910  T
Q  456 aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggata 555  Q
    || |||||||  ||||         |||||||||||||  |||||||||||||||||| ||||||| | | |||| ||||||||||||||||||||||||    
T  26158911 aagtccatac--agct---------ctggcttagaacggagcccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggata 26158999  T

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Target: chr3; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 367 - 563
Target Start/End: Original strand, 32151428 - 32151620
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatac 465  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||| || ||||| || | ||||||||||||| || | ||   |||||    
T  32151428 gggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtttcaaattcgattctctctagtgccaatttcggtgggctaagctcatac 32151527  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||| |||||    |||||||  |||| ||||||||||||||||||| | ||||||| | ||||||||||||| | |||||||||||||||||||||    
T  32151528 agagc-ttgct----ctggctttaaacggggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagttt 32151620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 355 - 563
Target Start/End: Original strand, 35492903 - 35493107
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| ||     
T  35492903 ttaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtggg 35493002  T
Q  455 c-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
    | || |||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | ||||||| | |    
T  35493003 ctaagtccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggattgaa 35493097  T
Q  554 taccgagttt 563  Q
    ||||||||||    
T  35493098 taccgagttt 35493107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 18177086 - 18176888
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||||||||||||||||||| ||||||||||| ||||| ||   |||| ||| ||| |||||||| ||||||||||||||| |||| || |    
T  18177086 catttggggttggcctagtggttgacttgagatcttggagtttgctcttccagaggtatcaggttcgattccctctggtgccaatttcggtggactaagt 18176987  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| |  ||| |||||||| | |||||||||||||| ||    
T  18176986 ccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccatcggattagtcgattcttggatcggatacaga 18176892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 25289913 - 25289716
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||| |||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| | ||||||||||||| || | || |    
T  25289913 catttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagt 25289814  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | ||||||||||||| | |||||||||||||||||    
T  25289813 ccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcc-ctcgaattagtcgattcttggatcggataccga 25289720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 361 - 559
Target Start/End: Original strand, 30257622 - 30257816
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||  ||||| ||| ||| |||||||| ||||||||||||||  |||| || |    
T  30257622 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgatggactaagt 30257721  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||    |||||||  || | ||||||||||||||||||| || |||||| | |||| |||||||| | |||||||||||||||||    
T  30257722 ccatacagagc-ttgct----ctggctttaaatggggcccccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggataccga 30257816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 354 - 563
Target Start/End: Original strand, 21362934 - 21363139
Alignment:
Q  354 attaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg-cg 452  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||| |||||||||  |    
T  21362934 attaacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtag 21363033  T
Q  453 gacaactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgg 552  Q
    |  || |||||||||||| |||||    |||||||  ||||  |||||||||||||||||| ||||||||| | |||| |||| ||| | ||||||||||    
T  21363034 gctaagtccatacagagc-ttgct----ctggctttaaacggagcccccgcaagtgggcggtgggattggttccctcggattaatcgattcttggatcgg 21363128  T
Q  553 ataccgagttt 563  Q
    |||||||||||    
T  21363129 ataccgagttt 21363139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 53424375 - 53424178
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  53424375 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagt 53424276  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    |||||||||| |||||| |||||   ||| |||| |||||||||||||| |||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  53424275 ccatacagag-tttgctatggct---tta-aacg-ggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccga 53424182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 356 - 563
Target Start/End: Original strand, 46576341 - 46576544
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||| | || |    
T  46576341 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggc 46576440  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || |||||||||||| |||||    |||||||  |||| |||||||||||||||||||  |||||||| | || | |||||||| | ||||||||||||    
T  46576441 taagtccatacagagc-ttgct----ctggctttaaacggggcccccgcaagtgggcggtcggattggtccccttggattagtcgattcttggatcggat 46576535  T
Q  555 accgagttt 563  Q
    |||||||||    
T  46576536 accgagttt 46576544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 8456349 - 8456151
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| ||||||||||| |||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  8456349 catttggggttggcctagtggttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 8456250  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||||||||| | ||||||||| | |||| |||||||| | |||| ||||||||||||    
T  8456249 ccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttgaatcggataccga 8456155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 356 - 563
Target Start/End: Complemental strand, 30807357 - 30807154
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || |    
T  30807357 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggc 30807258  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgagg-cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
     || |||||||||||| |||||    |||||||  |||| || |||||||||||||||||  |||||||| | |||| |||||||| | |||||||||||    
T  30807257 taagtccatacagagc-ttgct----ctggctttaaacggggccccccgcaagtgggcggtaggattggt-ccctcggattagtcgattcttggatcgga 30807164  T
Q  554 taccgagttt 563  Q
    ||||||||||    
T  30807163 taccgagttt 30807154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 355 - 563
Target Start/End: Complemental strand, 49258467 - 49258263
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    ||||| |||| |||||| |||||||||||| |||||||||||| ||| ||||||||   |||| ||| ||| |||||||| | ||||||||||||| ||     
T  49258467 ttaacccatttggggtttgcctagtggttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtggg 49258368  T
Q  455 c-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
    | || |||||||||||||| |||    |||||||  |||| ||||||| ||||||||||| ||||||||| | |||| |||||||| | |||||||||||    
T  49258367 ctaagtccatacagagctt-gct----ctggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgga 49258273  T
Q  554 taccgagttt 563  Q
    ||||||||||    
T  49258272 taccgagttt 49258263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 369 - 563
Target Start/End: Complemental strand, 52821826 - 52821637
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcg-gacaactccatacag 467  Q
    ||||||||||||||||||||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| | |  || |||||||||    
T  52821826 gttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgagctaagtccatacag 52821727  T
Q  468 agctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||| |||||    |||||||  |||| || ||||| |||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  52821726 agc-ttgct----ctggctttaaacg-gggccccgtaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 52821637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 366 - 563
Target Start/End: Original strand, 25379764 - 25379957
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccata 464  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||| | | ||||||||||||| || | || ||||||    
T  25379764 ggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggagggctaagtccata 25379863  T
Q  465 cagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||| |||    |||||||  |||| |||||||||||| |||||| ||||||||| | |||| |||||||| | |||||||||||||| ||||||    
T  25379864 cagagctt-gct----ctggctttaaacggggcccccgcaagcgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagttt 25379957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 374 - 563
Target Start/End: Complemental strand, 50731419 - 50731238
Alignment:
Q  374 cctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagcttt 473  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| | |||| |||||||||| |||||| |||||| |||||       
T  50731419 cctagtggttgacttgagatcttgaagtgtgctcctctcaaggtctcaagtttgattccgt-tggtaccaatttcggtggacaagtccatatagagc--a 50731323  T
Q  474 gctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||    ||| |||| || | ||||| | ||||||||||| ||||||||| | |||  |||||||| |||||||||||||||||||||||    
T  50731322 gct----ctgacttataa-ggggcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagttt 50731238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 374 - 563
Target Start/End: Original strand, 50781435 - 50781616
Alignment:
Q  374 cctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagcttt 473  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| | |||| |||||||||| |||||| |||||| |||||       
T  50781435 cctagtggttgacttgagatcttgaagtgtgctcctctcaaggtctcaagtttgattccgt-tggtaccaatttcggtggacaagtccatatagagc--a 50781531  T
Q  474 gctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||    ||| |||| || | ||||| | ||||||||||| ||||||||| | |||  |||||||| |||||||||||||||||||||||    
T  50781532 gct----ctgacttataa-ggggcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagttt 50781616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 367 - 563
Target Start/End: Complemental strand, 15566692 - 15566501
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatac 465  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||   |||| ||| ||| |||||||| | ||||||||||||| || | || |||||||    
T  15566692 gggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatac 15566593  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||| |||||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||  |||||||| | |||||||||||||||||||||    
T  15566592 agagc-ttgct----ctggctttaaacg-ggcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 15566501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 368 - 556
Target Start/End: Complemental strand, 55371477 - 55371302
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacag 467  Q
    ||||||||||||||||| |||| ||| ||||||| |||| |||||||||| ||| ||| |||||||| |||||||||||||||||||||| | |||        
T  55371477 ggttggcctagtggttggcttgcgattttggagtatgcttctctcaaggtctcatgttcgattccctttggtgccaatttcggcggacaagttcat---- 55371382  T
Q  468 agctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggatac 556  Q
    ||||         |||||||| |||| ||||| ||||||||||||| ||||||||| | |||| |||||||| ||||||||||||||||    
T  55371381 agct---------ctggcttaaaacggggccctcgcaagtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 369 - 563
Target Start/End: Original strand, 26174119 - 26174309
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacag 467  Q
    |||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||| ||| ||||||||||||||| ||   || |||||||||    
T  26174119 gttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggttaagtccatacag 26174218  T
Q  468 agctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||| |||    |||||||  ||   ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  26174219 agctt-gct----ctggctttaaatagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 26174309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 45529953 - 45529756
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||| ||||||||||  || | || |    
T  45529953 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcgatgggctaagt 45529854  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||    |||||||  |||| | ||||||||||||||||| ||||||||| | |||| |||||||| | ||| |||||||||||||    
T  45529853 ccatacagagc-ttgct----ctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccga 45529760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 351 - 563
Target Start/End: Original strand, 40940813 - 40941021
Alignment:
Q  351 aaaattaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    ||||||||| |||| |||||||| |||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| |||||||||||||||    
T  40940813 aaaattaacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 40940912  T
Q  451 cggac-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggat 549  Q
     |||| || |||||||||||| |||||    ||| |||  |||| ||||||| |||||||| ||  |||||||| | ||||||||| ||  | |||| ||    
T  40940913 tggactaagtccatacagagc-ttgct----ctgactttaaacggggcccccacaagtgggtggtaggattggtcccctcgaattactcaattcttgaat 40941007  T
Q  550 cggataccgagttt 563  Q
    | ||||||||||||    
T  40941008 cagataccgagttt 40941021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 380 - 563
Target Start/End: Complemental strand, 10190922 - 10190743
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgcttt 478  Q
    ||||| |||||||||||||||| ||||||||   |||  ||| |||||||||||| | ||||||||||||| || | || |||||||||||||| |||      
T  10190922 ggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gct-- 10190826  T
Q  479 ggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
      |||||||  |||| ||||||||||||||| ||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  10190825 --ctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 10190743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 356 - 563
Target Start/End: Complemental strand, 45272620 - 45272417
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| |||||||||||||| |||| |||||||||||||||| ||||||||   | || |||  || |||||||| ||||||||||||||| || |    
T  45272620 taacccatttggggttggcctagtcgttggcttgggatcttggagtttgctcctccagatgtctcagtttcgattccctctggtgccaatttcggtgggc 45272521  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || ||||||| |||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||| |   ||||||||||||    
T  45272520 taagtccatacggagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagttgactcttggatcggat 45272426  T
Q  555 accgagttt 563  Q
    |||||||||    
T  45272425 accgagttt 45272417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 34492774 - 34492576
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| || |||||||||||  || | || |    
T  34492774 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgctgccaatttcgttgggctaagt 34492675  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||    |||||||  |||| ||||||||||||||||||| ||||||||| |  ||  |||||| | | |||||||| ||||||||    
T  34492674 ccatacagagc-ttgct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtccattcagattagttgattcttggatctgataccga 34492580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 386 - 563
Target Start/End: Complemental strand, 39042026 - 39041853
Alignment:
Q  386 cttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgctttggctgg 484  Q
    |||||||||||||||| ||||||||   |||| ||||||| ||||| || ||||||||||||||| || | || ||||| |||||||| |||    ||||    
T  39042026 cttgggatcttggagtttgctcctccagaggtctcaagttcgattctctctggtgccaatttcggtgggctaagtccatgcagagctt-gct----ctgg 39041932  T
Q  485 cttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||  |||| |||||||||||||||| || ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  39041931 ctttaaacggggcccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttt 39041853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 380 - 563
Target Start/End: Complemental strand, 10083999 - 10083820
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgcttt 478  Q
    ||||| |||||||||||||||| ||||||||   |||  ||| |||||||||||| | ||||||||||||| || | || |||||||||||||| |||      
T  10083999 ggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gct-- 10083903  T
Q  479 ggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
      |||||||  |||| ||||||| ||||||| ||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  10083902 --ctggctttaaacggggcccccacaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 10083820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 31538037 - 31537839
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| ||| |||||||||||| ||||||||   |||| ||| |||||||||||| |||||||||||| || || | || |    
T  31538037 catttggggttggcctagtggttggcttaggatcttggagtttgctcctccagaggtctcatgtttgattccctctggtgccaattttggtgggctaagt 31537938  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    | ||||||||| || ||    |||||||  ||||  ||||| |||||||||||| | ||||||| | ||||||||||||  | ||||||||||||| |||    
T  31537937 ctatacagagc-ttact----ctggctttaaacggagcccctgcaagtgggcggtgagattggtcccctcgaattagtcaattcttggatcggatatcga 31537843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 375 - 563
Target Start/End: Complemental strand, 53234095 - 53233912
Alignment:
Q  375 ctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagcttt 473  Q
    |||||||||| |||||||||||||||| ||||||||   | || ||| ||| ||||| || ||||||||||||||| || | || ||||||||||||||     
T  53234095 ctagtggttggcttgggatcttggagtttgctcctccagaagtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt- 53233997  T
Q  474 gctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||    ||||||   |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | ||| |||||||||||||||||    
T  53233996 gct----ctggctctaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttt 53233912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 541
Target Start/End: Original strand, 50582990 - 50583165
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| |||||||||||||||||||  ||||||||||||||| ||||||||| ||||||||| ||| |||| ||| || |||||||||||  ||  || ||    
T  50582990 catttggggttggcctagtggttggtttgggatcttggagtttgctcctcttaaggtttcaggttcgatttcctctgttgccaatttcgttgggtaagtc 50583089  T
Q  461 catacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggt 541  Q
    |||||| | ||||| |||| ||   ||| |  |||  ||||| ||||| |||| ||||||||| |||||||||||||||||    
T  50583090 catacaaaactttgatttgact---ttaaatggag--ccccgtaagtgagcggtgggattggtcctctcgaattagtcggt 50583165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 25344256 - 25344059
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||||||||   || | ||| |||||||||||| ||||| ||||||  | || | || |    
T  25344256 catttggggttggcctagtggttgacttgggatcttcgagtttgctcctccagagatctcaggtttgattccctttggtgtcaatttttgtggtctaagt 25344157  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    |||||||||| ||||||    |||||||  |||| ||||||||| ||||||||  ||||||||| | |||| |||||||| | ||| ||||| |||||||    
T  25344156 ccatacagag-tttgct----ctggctttaaacggggcccccgctagtgggcgatgggattggttc-ctcggattagtcgattcttagatcgaataccga 25344063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 370 - 520
Target Start/End: Original strand, 26108299 - 26108445
Alignment:
Q  370 ttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacaga 468  Q
    ||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || ||||||||||    
T  26108299 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacaga 26108398  T
Q  469 gctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggatt 520  Q
    |||| |||    |||||||  |||| ||||||||||||||||| | ||||||    
T  26108399 gctt-gct----ctggctttaaacggggcccccgcaagtgggctgtgggatt 26108445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 7485724 - 7485635
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| ||||||||| |||||||||||||||||||||||||| ||||||||  ||||| ||| ||| |||||||| || ||||||||||||    
T  7485724 catttggggttggcatagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttcgg 7485635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 462 - 559
Target Start/End: Complemental strand, 30695347 - 30695251
Alignment:
Q  462 atacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    |||||||||||||||| |||||||||||||||  |||  ||||||||||||  ||||||||| | |||  ||||||||||||||||||||||||||||    
T  30695347 atacagagctttgcttcggctggcttagaacggtgccttcgcaagtgggcgatgggattggt-ccctcagattagtcggtccttggatcggataccga 30695251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 31203743 - 31203671
Alignment:
Q  280 gatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatatttaatataa 352  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||  || |||||||||||||||||||||||    
T  31203743 gatatttgattattttttggacaaattacataaataatactataagatataaacaaacttatatttaatataa 31203671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 8097362 - 8097280
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  8097362 ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 8097280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 490 - 559
Target Start/End: Complemental strand, 33398542 - 33398473
Alignment:
Q  490 aacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    |||| ||||||||||||||||||| ||||||||| | ||||||||||||| | |||||||||||||||||    
T  33398542 aacggggcccccgcaagtgggcggtgggattggttccctcgaattagtcgattcttggatcggataccga 33398473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 381 - 547
Target Start/End: Original strand, 34844396 - 34844557
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttgg 480  Q
    |||| |||| || |||||||||||||||||||||||| ||| ||| ||||||||   | ||||||||||| |||| | | |||||||||||||||| |||    
T  34844396 gttggcttgagaccttggagtgtgctcctctcaaggtctcaggttcgattccctccagagccaatttcggtggactagtacatacagagctttgctatgg 34844495  T
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttgg 547  Q
    ||   ||| || | |||||||||||||||  || ||||||||  | |||| ||||||||||||||||    
T  34844496 ct---tta-aatg-ggcccccgcaagtggatggtgggattggacccctcggattagtcggtccttgg 34844557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 281 - 358
Target Start/End: Original strand, 30484860 - 30484938
Alignment:
Q  281 atatttgattattttttgg-acaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaattaa 358  Q
    ||||||||||||||||| | |||| ||||||| ||||||||||||||||  || | |||||||||||||||||||||||    
T  30484860 atatttgattatttttttgtacaaattacatgaataatactataaagtattaaaacacttatatttaatataaaattaa 30484938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 361 - 447
Target Start/End: Complemental strand, 52455848 - 52455762
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    |||| ||||||||||||||||||| || ||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||    
T  52455848 catttggggttggcctagtggttggctagggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 52455762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 497 - 563
Target Start/End: Complemental strand, 53848501 - 53848435
Alignment:
Q  497 cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  53848501 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 53848435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 7470414 - 7470325
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| |||||| ||||||||||||||||| ||||||||||| ||||||||  ||||| ||| ||| |||||||| |  ||||||||||||    
T  7470414 catttggggtttgcctagtggttgacttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctaatgccaatttcgg 7470325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 374 - 479
Target Start/End: Complemental strand, 51391025 - 51390920
Alignment:
Q  374 cctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagcttt 473  Q
    ||||||||||| |||| |||||| |||| ||||||||||||| | |||| ||  ||||||| | |||||||||||||  |||||  ||||||| ||||||    
T  51391025 cctagtggttggcttgagatcttagagtttgctcctctcaagatctcaatttcaattccctcttgtgccaatttcggtagacaagcccatacaaagcttt 51390926  T
Q  474 gctttg 479  Q
    ||||||    
T  51390925 gctttg 51390920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 4462622 - 4462676
Alignment:
Q  352 aaattaactcattaggggttggcctagtggttgacttgggatcttggagtgtgct 406  Q
    ||||||||||||| ||||||||||||||||||| |||| ||||||||||| ||||    
T  4462622 aaattaactcatttggggttggcctagtggttggcttgagatcttggagtttgct 4462676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 501 - 563
Target Start/End: Original strand, 24407395 - 24407457
Alignment:
Q  501 cgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  24407395 cgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 24407457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 357 - 450
Target Start/End: Complemental strand, 6041875 - 6041782
Alignment:
Q  357 aactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||||| ||||||| |||| |||||||||||  |||||||||| ||||||||||||||  ||| ||| |||| ||  | |||||||||||||    
T  6041875 aactcatttggggttgccctaatggttgacttgaaatcttggagtttgctcctctcaaggagtcatgttcgattgcccctagtgccaatttcgg 6041782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 498 - 563
Target Start/End: Complemental strand, 24165781 - 24165716
Alignment:
Q  498 ccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||||||| ||||||| | | |||| |||||||| | |||||||||||||||||||||    
T  24165781 ccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagttt 24165716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 370 - 466
Target Start/End: Original strand, 26535045 - 26535139
Alignment:
Q  370 ttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccataca 466  Q
    |||| ||||||||||||||| ||| ||| |||||| || ||||||||||||| ||||||||  || ||||| ||||||| | |||||| ||||||||    
T  26535045 ttggtctagtggttgacttgagattttgaagtgtgttcatctcaaggtttcatgtttgatt--ctttggtgtcaatttcagtggacaagtccataca 26535139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 447
Target Start/End: Original strand, 46518637 - 46518720
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    |||||||| |||||||  || |||||||||| |||||||||||||| ||||||||||| ||||||||| || || |||||||||    
T  46518637 gggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctgatgccaattt 46518720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 366 - 472
Target Start/End: Original strand, 11390605 - 11390712
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccata 464  Q
    |||||||||||||||||||  ||| ||||||||||| | ||||||  ||| ||||| |||||||| ||| ||||| |||||| || || | || ||||||    
T  11390605 ggggttggcctagtggttggtttgagatcttggagttttctcctccaaagatttcaggtttgatttcctctggtgtcaattttggtgggctaagtccata 11390704  T
Q  465 cagagctt 472  Q
    ||||||||    
T  11390705 cagagctt 11390712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 395 - 450
Target Start/End: Original strand, 40777052 - 40777107
Alignment:
Q  395 ttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    ||||||||||||||||||||||| ||| ||||||||| || | |||||||||||||    
T  40777052 ttggagtgtgctcctctcaaggtctcaggtttgattctctctagtgccaatttcgg 40777107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 382 - 417
Target Start/End: Original strand, 42430360 - 42430395
Alignment:
Q  382 ttgacttgggatcttggagtgtgctcctctcaaggt 417  Q
    ||||||||||||||||||||||||||||||||||||    
T  42430360 ttgacttgggatcttggagtgtgctcctctcaaggt 42430395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 361 - 447
Target Start/End: Original strand, 55287801 - 55287887
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctca-aggtttcaagtttgattccctatggtgccaattt 447  Q
    |||| ||||||||| ||||||||| ||||| ||||| |||| ||||||| ||| |||||||| ||| |||||||| ||||||||||||    
T  55287801 catttggggttggcatagtggttggcttggaatcttagagtttgctcct-tcagaggtttcaggttcgattccctctggtgccaattt 55287887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 368 - 430
Target Start/End: Original strand, 42963531 - 42963593
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgatt 430  Q
    ||||||| |||||||||| ||| ||||||| ||| ||||| |||||| |||||||||||||||    
T  42963531 ggttggcatagtggttgatttgagatcttgaagtttgctcatctcaaagtttcaagtttgatt 42963593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 50162057 - 50162127
Alignment:
Q  377 agtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||||||||||||||||||| |||| |||||||||||||| |||  || |||||||| |  |||||||||    
T  50162057 agtggttgacttgggatcttgaagtgcgctcctctcaaggtctcagattcgattccctctattgccaattt 50162127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 369 - 482
Target Start/End: Complemental strand, 53288903 - 53288790
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacag 467  Q
    ||||||| ||||||||  ||||||| || |||| ||||||||  ||||| ||| | | |||||||| ||||||||||||||| |||| || ||||||||     
T  53288903 gttggccaagtggttggtttgggatattagagtttgctcctccaaaggtctcaggctcgattccctctggtgccaatttcggtggactaagtccatacaa 53288804  T
Q  468 agctttgctttggct 482  Q
    ||| |||||||||||    
T  53288803 agc-ttgctttggct 53288790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 459 - 563
Target Start/End: Original strand, 54475778 - 54475877
Alignment:
Q  459 tccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccg 558  Q
    |||||||||||||| |||||||||   ||| |||| |||| |||||||||||||| ||||||||| | || | |||||||| | |||||||| |||||||    
T  54475778 tccatacagagctt-gctttggct---tta-aacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccg 54475872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 494 - 563
Target Start/End: Complemental strand, 7485600 - 7485532
Alignment:
Q  494 aggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||| |||||||| ||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  7485600 aggcccctgcaagtggccggtgggattggtcc-ctcggattagtcgattcttggatcggataccgagttt 7485532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 539
Target Start/End: Complemental strand, 29915462 - 29915295
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatac 465  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||   |||| ||| ||| |||| | | |||||||| |||||| || | || | |||||    
T  29915462 gggttgacctaatggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgccattttcggtgggctaagtacatac 29915363  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcg 539  Q
    |||||||  |     |||||||  |||| ||||||||||||||||||| ||||||| | |  ||||||||||||    
T  29915362 agagcttgcc-----ctggctttaaacg-ggcccccgcaagtgggcggtgggattgatcccatcgaattagtcg 29915295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 539
Target Start/End: Complemental strand, 29964615 - 29964448
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatac 465  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||   |||| ||| ||| |||| | | |||||||| |||||| || | || | |||||    
T  29964615 gggttgacctaatggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatttcttctggtgccattttcggtgggctaagtacatac 29964516  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcg 539  Q
    |||||||  |     |||||||  |||| ||||||||||||||||||| ||||||| | |  ||||||||||||    
T  29964515 agagcttgcc-----ctggctttaaacg-ggcccccgcaagtgggcggtgggattgatcccatcgaattagtcg 29964448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 495 - 563
Target Start/End: Complemental strand, 8958104 - 8958036
Alignment:
Q  495 ggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||||||||| ||||||||| | |||  |||| ||| | |||||||| ||||||||||||    
T  8958104 ggcccccgcaagtgggcggtgggattggtcccctctgattaatcgattcttggatcagataccgagttt 8958036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 367 - 447
Target Start/End: Original strand, 30311315 - 30311398
Alignment:
Q  367 gggttggcctagtggttga--cttgggatcttggagtgtgctcct-ctcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||||||||||||||  |  |||||||||| ||||||||||||| |||||||| ||| ||| ||||| || ||||||||||||    
T  30311315 gggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgccaattt 30311398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 398 - 523
Target Start/End: Original strand, 31766726 - 31766847
Alignment:
Q  398 gagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttggctggcttagaacgaggc 497  Q
    |||||||||||||| ||||| ||| ||| |||| ||| || || ||||||||| |||||  || |||||||| |||||||    || |||| ||||||||    
T  31766726 gagtgtgctcctcttaaggtctcaggttcgatttcctctgatgtcaatttcggtggacagatctatacagagttttgctt----tgacttaaaacgaggc 31766821  T
Q  498 ccccgcaagtgggcggcgggattggt 523  Q
    ||| |||||  ||||| |||||||||    
T  31766822 ccctgcaagcaggcggtgggattggt 31766847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 515 - 563
Target Start/End: Complemental strand, 32094806 - 32094758
Alignment:
Q  515 gggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||| |||||  |||||||||| |||||||||||||||||||||    
T  32094806 gggattggtcctctcatattagtcggttcttggatcggataccgagttt 32094758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 361 - 417
Target Start/End: Original strand, 36660768 - 36660824
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggt 417  Q
    |||| ||||||| |||||||||||  || |||||||||||| |||||||||||||||    
T  36660768 catttggggttgacctagtggttggtttaggatcttggagtttgctcctctcaaggt 36660824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 495 - 563
Target Start/End: Original strand, 48105005 - 48105073
Alignment:
Q  495 ggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||| ||||||||||| | ||||||| |  ||| |||||||| | |||||||||||||||||||||    
T  48105005 ggcccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

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Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 381 - 449
Target Start/End: Complemental strand, 53863918 - 53863850
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcg 449  Q
    |||| ||||||| |||||||||||||||||||||||| | | |||  |||| || ||||||||||||||    
T  53863918 gttggcttgggaccttggagtgtgctcctctcaaggtcttaggttcaattctctctggtgccaatttcg 53863850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 39253708 - 39253787
Alignment:
Q  368 ggttggcctagtggtt-gacttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaat 445  Q
    ||||| |||||||||| |||||||||||| |||||||||||||| ||||||| ||| ||| ||||| || || |||||||    
T  39253708 ggttgacctagtggttagacttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctgatgccaat 39253787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 425
Target Start/End: Complemental strand, 50195473 - 50195414
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtt 425  Q
    |||||| || ||||||||| |||||||||||||||| |||| |||||||| | |||||||    
T  50195473 ggggttagcatagtggttgtcttgggatcttggagtttgcttctctcaagatctcaagtt 50195414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 28703450 - 28703388
Alignment:
Q  386 cttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    |||||||||| |||||||||||||| ||||||| ||| ||| ||||| || ||||||||||||    
T  28703450 cttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctggtgccaattt 28703388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 381 - 431
Target Start/End: Complemental strand, 35623317 - 35623267
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattc 431  Q
    |||| ||||||| |||||||||||||||||||||||| ||| ||| |||||    
T  35623317 gttggcttgggaccttggagtgtgctcctctcaaggtctcatgttcgattc 35623267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 494 - 563
Target Start/End: Original strand, 1692960 - 1693029
Alignment:
Q  494 aggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||||||||||| |||||| |  | |||  |||||||| | |||| ||||||||||||||||    
T  1692960 aggcccccgcaagtgggcggtgggatttgccccctcagattagtcgattcttgaatcggataccgagttt 1693029  T

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Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 563
Target Start/End: Original strand, 4048085 - 4048146
Alignment:
Q  502 gcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||| ||| ||||||||| | |||| |||||| | | |||||||||||||||||||||    
T  4048085 gcaagtggacggtgggattggtcccctcggattagttgattcttggatcggataccgagttt 4048146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 355 - 396
Target Start/End: Original strand, 24703696 - 24703737
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatctt 396  Q
    |||||||||| | |||||| ||||||||||||||||||||||    
T  24703696 ttaactcatttgaggttggtctagtggttgacttgggatctt 24703737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 498 - 563
Target Start/End: Original strand, 25017620 - 25017684
Alignment:
Q  498 ccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||||||| ||||||||| | || | |||||||| | ||||||||| |||||||||||    
T  25017620 ccccgcaagtgggcggtgggattggttc-cttggattagtcgattcttggatcgaataccgagttt 25017684  T

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Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 414
Target Start/End: Original strand, 27887422 - 27887479
Alignment:
Q  357 aactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaa 414  Q
    |||||||| |||||||  |||||||||| |||| ||| |||||||||||| |||||||    
T  27887422 aactcatttggggttgatctagtggttggcttgagatattggagtgtgcttctctcaa 27887479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 42799814 - 42799762
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcctctcaaggt 417  Q
    |||||||||| |||||  || ||||||| ||||||||||||||||||||||||    
T  42799814 gggttggcctggtggtgttggcttgggaccttggagtgtgctcctctcaaggt 42799762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 490 - 563
Target Start/End: Complemental strand, 52455723 - 52455650
Alignment:
Q  490 aacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||| ||||||||||||||   || ||||||||| | |||| |||||||| | ||||||| |||||||||||||    
T  52455723 aacggggcccccgcaagtgactggtgggattggtcccctcggattagtcgattcttggattggataccgagttt 52455650  T

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Target: chr1 (Bit Score: 86; Significance: 1e-40; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 32729543 - 32729740
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| ||||||||||||||||||| ||||||||||| |||| |||||||||||| || ||| ||| |||||||||||||||||||||||| || ||| ||    
T  32729543 catttggggttggcctagtggttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccctatggtgccaatttcggtgggcaagtc 32729642  T
Q  461 catacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgag 560  Q
    |||||||||| |||||    |||||||  || | || |||||||||||||||| ||||||| | | || | ||||||||||| |||||||||||||||||    
T  32729643 catacagagc-ttgct----ctggctttaaatggggtccccgcaagtgggcggtgggattgatccccttggattagtcggtctttggatcggataccgag 32729737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 351 - 563
Target Start/End: Complemental strand, 4621446 - 4621238
Alignment:
Q  351 aaaattaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    ||||| ||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| |||||||||||||||    
T  4621446 aaaatcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 4621347  T
Q  451 cggac-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggat 549  Q
     || | || |||||||||||||| |||    |||||||  |||| || |||||||||||||||| ||||||||| | |||| |||||||| | |||||||    
T  4621346 tgggctaagtccatacagagctt-gct----ctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggat 4621252  T
Q  550 cggataccgagttt 563  Q
    ||||||||||||||    
T  4621251 cggataccgagttt 4621238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 355 - 559
Target Start/End: Original strand, 24674385 - 24674585
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| ||     
T  24674385 ttaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtggg 24674484  T
Q  455 c-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
    | || |||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||    
T  24674485 ctaagtccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcgga 24674579  T
Q  554 taccga 559  Q
    ||||||    
T  24674580 taccga 24674585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 1486418 - 1486616
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| ||||||| ||||||||||| |||||||||||||||||  || |||||||||| ||| ||| |||||||| ||||||||||||||  ||  || ||    
T  1486418 catttggggttgacctagtggttggcttgggatcttggagtg--ctactctcaaggtctcaggttcgattccctttggtgccaatttcgatgggtaagtc 1486515  T
Q  461 catacagagctttgctttggctggcttagaacgaggcccc--cgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccg 558  Q
    ||||||||||||||||    ||| ||||||||| ||||||  ||||||||| ||| ||||| ||| | |||  |||||||||||||||||||||||||||    
T  1486516 catacagagctttgct----ctgacttagaacggggcccccccgcaagtggacggtgggatcggtcccctccgattagtcggtccttggatcggataccg 1486611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 356 - 563
Target Start/End: Original strand, 24122016 - 24122219
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||| || ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || |    
T  24122016 taactcatttggggttggcttagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggc 24122115  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || |||||||||||||| |||    |||||||  |||| ||| ||||||||||||||| ||||||||| | |||| |||||||| | ||||||||||||    
T  24122116 taagtccatacagagctt-gct----ctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggat 24122210  T
Q  555 accgagttt 563  Q
    |||||||||    
T  24122211 accgagttt 24122219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 46607808 - 46608006
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  46607808 catttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 46607907  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||    ||| |||  || |   ||||||||||||||||| ||||||| | | |||| |||||||||||||||||||||||| |||    
T  46607908 ccatacagagc-ttgct----ctgactttaaaaggcccccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggatatcga 46608002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 15059601 - 15059403
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| ||||| |||||||||| ||||||||   |||| ||| ||| ||||| || ||||||||||||||| || | || |    
T  15059601 catttggggttggcctagtggttggcttggaatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagt 15059502  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| || |||||||||||||||| | ||||||| | ||||||||||||| | |||||||||||||||||    
T  15059501 ccatacagagctt-gct----ctggctttaaacggggtccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccga 15059407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 351 - 563
Target Start/End: Original strand, 34778330 - 34778535
Alignment:
Q  351 aaaattaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    ||||| ||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| |||||||||||| |||| ||||||| ||    
T  34778330 aaaataaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtaccaattttgg 34778429  T
Q  451 cggacaactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatc 550  Q
     ||     ||||||||||| ||||||||||||   ||| |||| ||||||||||||||| ||| ||||||||| | || | |||||||| | ||||||||    
T  34778430 tgg--gtttccatacagag-tttgctttggct---tta-aacggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatc 34778522  T
Q  551 ggataccgagttt 563  Q
    |||||||||||||    
T  34778523 ggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 353 - 563
Target Start/End: Complemental strand, 7766934 - 7766728
Alignment:
Q  353 aattaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcg 452  Q
    ||||||| |||| ||||||||||||||||||  |||||||||||||||| ||||||||   |||| ||| ||| |||||||| |||||| |||||||| |    
T  7766934 aattaacccattcggggttggcctagtggttagcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgctaatttcggtg 7766835  T
Q  453 gac-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcg 551  Q
    | | || |||||||||||| |||||    ||| |||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||| ||||    
T  7766834 ggctaagtccatacagagc-ttgct----ctgactttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcg 7766740  T
Q  552 gataccgagttt 563  Q
    |||| |||||||    
T  7766739 gatatcgagttt 7766728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 7197445 - 7197248
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| || |||||||||||| ||  || ||    
T  7197445 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggtaagtc 7197346  T
Q  461 catacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgag 560  Q
     ||||||| | |||||    |||||||  ||||||||||| |||||||||||| | ||||||| | |||| |||||||| | | ||||||||||||||||    
T  7197345 aatacaga-ccttgct----ctggctttaaacgaggcccctgcaagtgggcggtgagattggtcccctcggattagtcgattcatggatcggataccgag 7197251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 30677174 - 30677372
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||| |||||||||||  ||||||||| ||||| ||||||||  ||||| ||| |||||||||||| ||||||||||||||| || | || |    
T  30677174 catttggggttgacctagtggttggtttgggatctaggagtttgctcctccaaaggtctcaggtttgattccctctggtgccaatttcggtgggctaagt 30677273  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||||||||   ||| || | | ||||||||||||||||| ||||||||| | |||  |||||||||| |||||| |||||| |||    
T  30677274 ccatacagagc-ttgctttggct---tta-aatgggacccccgcaagtgggcggtgggattggtcccctcagattagtcggttcttggaccggatatcga 30677368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 371 - 563
Target Start/End: Original strand, 17935777 - 17935965
Alignment:
Q  371 tggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagag 469  Q
    |||| |||||||||||||||||||||||||| ||||||||   |||| ||| ||| |||||| | | ||||||||||||| || | || |||||||||||    
T  17935777 tggcatagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggtgggctaagtccatacagag 17935876  T
Q  470 ctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
     ||||||    |||||||  |||| ||||||||||||||||||  ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  17935877 -tttgct----ctggctttaaacggggcccccgcaagtgggcgatgggattggtccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 387 - 559
Target Start/End: Original strand, 16539632 - 16539799
Alignment:
Q  387 ttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttggctggct 486  Q
    |||||||||||||||| ||||||  |||||| ||| |||||||||||| |||||||||||| || || ||| |||||||||||||||||    |||||||    
T  16539632 ttgggatcttggagtgagctccttgcaaggtctcaggtttgattccctctggtgccaattttggtgggcaagtccatacagagctttgc----gctggct 16539727  T
Q  487 tagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||| || ||| | ||||||| || ||||||||| | ||| ||||||||| | |||| ||||||||||||    
T  16539728 tagaacg-gggccctgtaagtgggtggtgggattggtcccctcaaattagtcgatacttgtatcggataccga 16539799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 361 - 476
Target Start/End: Original strand, 24216976 - 24217091
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||| ||| ||||||||||||||| ||  || ||    
T  24216976 catttggggttgacctagtggttgacttgggatcttggagtgtgctcctctcaaggtctcaggttcgattacctttggtgccaatttcggtgggtaaatc 24217075  T
Q  461 catacagagctttgct 476  Q
    |||||| || ||||||    
T  24217076 catacaaagatttgct 24217091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 369 - 556
Target Start/End: Complemental strand, 25237180 - 25236997
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacaga 468  Q
    ||||||||| |||||   ||||||||||||||| |||| |||||||||| ||| ||| |||||||| | ||||||||||||| || ||| ||||||||||    
T  25237180 gttggcctaatggttagtttgggatcttggagtttgcttctctcaaggtctcaggttcgattccctctagtgccaatttcggtgggcaagtccatacaga 25237081  T
Q  469 gctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggatac 556  Q
    | ||||||    ||| ||||||| |  ||| |||||||||| ||| || |||||| |||||  |||||||||||||| ||||||||||    
T  25237080 gttttgct----ctgacttagaatggtgcctccgcaagtggacggtggaattggtcctctcatattagtcggtcctttgatcggatac 25236997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 355 - 476
Target Start/End: Original strand, 1138571 - 1138692
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    ||||| |||| ||||||| ||||||||||| |||| ||||||||||||||||||||||||||| | | ||| || || || | ||||||||||||| |||    
T  1138571 ttaacccatttggggttgacctagtggttggcttgagatcttggagtgtgctcctctcaaggtcttaggttcgaatctctctagtgccaatttcggtgga 1138670  T
Q  455 caactccatacagagctttgct 476  Q
    ||| ||||||||||||||||||    
T  1138671 caagtccatacagagctttgct 1138692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 361 - 551
Target Start/End: Original strand, 16899509 - 16899687
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||| |||||| |        || |||||||| ||||||||||||||| || | | ||    
T  16899509 catttggggttggcctagtggttgacttgtaatcttggagtgtgctgctctcagg--------ttcgattccctctggtgccaatttcggtgggccagtc 16899600  T
Q  461 catacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcg 551  Q
    |||||| |||||||||    |||| |||||||| |||||| |||||||| ||| | ||||||| | |||| ||||||||||||||||||||    
T  16899601 catacaaagctttgct----ctggtttagaacggggcccctgcaagtggacggtgagattggtcccctcggattagtcggtccttggatcg 16899687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 191 - 339
Target Start/End: Complemental strand, 50741562 - 50741414
Alignment:
Q  191 tagtcaatcccggataatggtgtgtagcggttgaccctaaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatttgatt 290  Q
    ||||||||||||||||  ||||| ||||||  ||||| |||||||||||||  ||||||| ||||||||||||| ||||| ||  ||  |||||||||||    
T  50741562 tagtcaatcccggatagcggtgtatagcggccgaccccaaaagtgggatagcgggatagcgtatagcggtatgacaaatagcggtcaccgatatttgatt 50741463  T
Q  291 attttttggacaagttacatgtataatactataaagtacaaacaaactt 339  Q
    |||||||||||||  |||||| ||  ||||| |||||| ||||||||||    
T  50741462 attttttggacaaactacatgaattgtactaaaaagtaaaaacaaactt 50741414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 355 - 562
Target Start/End: Original strand, 8077639 - 8077841
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| ||||| || ||||||||||||||| ||     
T  8077639 ttaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtggg 8077738  T
Q  455 c-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
    | || |||||||||||| |||||    |||||||  |||  ||||||||||||||||||| ||||||||| | |||| |||| ||| |  ||||||||||    
T  8077739 ctaagtccatacagagc-ttgct----ctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcg-attaatcgattattggatcgga 8077832  T
Q  554 taccgagtt 562  Q
     ||||||||    
T  8077833 gaccgagtt 8077841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 378 - 563
Target Start/End: Complemental strand, 37351643 - 37351454
Alignment:
Q  378 gtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgct 476  Q
    ||||||| |||||||||||||||| ||||||||  || || ||| ||| |||||| | || |||||||||||| || | || |||||||||||||| |||    
T  37351643 gtggttggcttgggatcttggagtttgctcctccaaatgtctcaggttcgattccttctgatgccaatttcggtgggctaagtccatacagagctt-gct 37351545  T
Q  477 ttgg-----ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
     |||     |||||||  |||| ||||||| ||||||||||| ||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  37351544 ctggaagctctggctttaaacg-ggcccccacaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 375 - 563
Target Start/End: Complemental strand, 9926333 - 9926147
Alignment:
Q  375 ctagtggttgacttgggatcttggagtgtgctcctctcaaggtttc--aagtttgattccctatggtgccaatttcggcggacaactccatacagagctt 472  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||  |  || |||||| | ||||| |||||| || || ||| |||||||| || ||    
T  9926333 ctagtagttgacttgggatcttggagtgtgctcctctcaaggtctctcagattcgattccttctggtgtcaattttggtgggcaaatccatacaaagttt 9926234  T
Q  473 tgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||    |||||||||||||  |||||||||| ||||||| ||||||| | |  |   |||||||||||||| |||||||||||||||||    
T  9926233 tgct----ctggcttagaacggagcccccgcaactgggcggtgggattgatccctttagattagtcggtccttcgatcggataccgagttt 9926147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 33858148 - 33858224
Alignment:
Q  282 tatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaattaa 358  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  33858148 tatttgatcattttttggacaaattacatgaataatactataaagtataaacaaacatatatttaatataaaattaa 33858224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 33922775 - 33922699
Alignment:
Q  282 tatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaattaa 358  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  33922775 tatttgatcattttttggacaaattacatgaataatactataaagtataaacaaacatatatttaatataaaattaa 33922699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 229 - 339
Target Start/End: Complemental strand, 36497199 - 36497089
Alignment:
Q  229 aaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatttgattattttttggacaagttacatgtataatactataaagta 328  Q
    ||||||||||||| |||||||  ||||||||||||| ||||| ||  || ||||||||||||||||| | |||||  |||||| ||||||||||||| ||    
T  36497199 aaaagtgggatagcaggatagtgtatagcggtatgacaaatagcggtcactgatatttgattattttgttgacaaactacatgaataatactataaaata 36497100  T
Q  329 caaacaaactt 339  Q
    |||||||||||    
T  36497099 caaacaaactt 36497089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 480 - 563
Target Start/End: Original strand, 35138102 - 35138184
Alignment:
Q  480 gctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||||| | ||||||||||||||||| ||||||| | | |||| ||||||||||||||||||||||||||||||||    
T  35138102 gctggcttagaacg-gacccccgcaagtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagttt 35138184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 373 - 563
Target Start/End: Original strand, 7578419 - 7578605
Alignment:
Q  373 gcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagct 471  Q
    |||||||||||| |||||||||||||||| || |||||   |||| ||| ||| |||||||||||||||||||||||| || | || |||||||| |||     
T  7578419 gcctagtggttggcttgggatcttggagtttgttcctccagaggtctcaggttcgattccctatggtgccaatttcggtgggctaagtccatacaaagc- 7578517  T
Q  472 ttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||    ||| |||  |||| ||||| |||||||||| || ||||||||| | |||| |||||| | |  ||||||||||||||||||||    
T  7578518 ttgct----ctgactttaaacggggccctcgcaagtgggtggtgggattggttccctcggattagttgatttttggatcggataccgagttt 7578605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 243 - 348
Target Start/End: Complemental strand, 19636204 - 19636099
Alignment:
Q  243 aggatagcatatagcggtatgataaataacgaccattgatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttata 342  Q
    |||||||| |||||| |||||| ||||| ||  |   |||||| ||||||||||||||||| ||||||| ||||||| |||||||| |||||||||||||    
T  19636204 aggatagcgtatagcagtatgacaaatagcggtcgccgatattggattattttttggacaaattacatgaataatacgataaagtataaacaaacttata 19636105  T
Q  343 tttaat 348  Q
    ||||||    
T  19636104 tttaat 19636099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 355 - 563
Target Start/End: Complemental strand, 27455071 - 27454865
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcg-g 453  Q
    ||||| |||| |||||||| |||||||||| |||||||||||||||| ||||||||   |||| ||| ||| ||||| || || |||||||||||| | |    
T  27455071 ttaacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcactctgatgccaatttcggtgag 27454972  T
Q  454 acaactccatacagagctttgctttggctggcttagaacgag--gcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcg 551  Q
      || |||||||||||| |||||    |||||||  |||| |   |||||||| |||||||| ||||||||| | |||| |||||||| | |||||||||    
T  27454971 ctaagtccatacagagc-ttgct----ctggctttaaacgggccccccccgcatgtgggcggtgggattggtcccctcggattagtcgattcttggatcg 27454877  T
Q  552 gataccgagttt 563  Q
    |||||| |||||    
T  27454876 gatacctagttt 27454865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 355 - 563
Target Start/End: Complemental strand, 40802272 - 40802070
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    ||||| |||| ||||||||| | ||||||| |||| ||| ||||||| ||||| ||||||||| ||| ||||||||| | ||||||||||||| |  |      
T  40802272 ttaacccatttggggttggctttgtggttggcttgagatattggagtttgctcatctcaaggtctcatgtttgattctccatggtgccaattttgatgag 40802173  T
Q  455 caactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
    ||| |||||||||||| |||||    ||| |||  |||| || ||||||||||||| || | ||||||| |||| |||||||||| | |||| |||| ||    
T  40802172 caagtccatacagagc-ttgct----ctgactttaaacg-ggtccccgcaagtgggtggtgagattggtcctctagaattagtcgattcttgaatcgaat 40802079  T
Q  555 accgagttt 563  Q
    |||||||||    
T  40802078 accgagttt 40802070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 450
Target Start/End: Original strand, 39964514 - 39964599
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||||||||| |||  || |||| || |||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||    
T  39964514 gggttggcctagaggtgttggcttgcgaccttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcgg 39964599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 368 - 560
Target Start/End: Original strand, 1378903 - 1379090
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccataca 466  Q
    ||||||| |||||||||||||||||||||||||| ||||||||  || || ||| ||| |||| ||| ||||| ||||||||| || | || ||||||||    
T  1378903 ggttggcttagtggttgacttgggatcttggagtttgctcctccaaaagtctcatgttcgatttcctctggtgtcaatttcggtgggctaagtccataca 1379002  T
Q  467 gagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgag 560  Q
    || | |||||    |||||||  |||| ||||||||||||||| ||| | ||||||| | |||  |||||||| | ||| ||||||||||||||    
T  1379003 gaac-ttgct----ctggctttaaacg-ggcccccgcaagtggacggtgagattggtcccctcagattagtcgattcttagatcggataccgag 1379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 361 - 449
Target Start/End: Original strand, 2272342 - 2272430
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcg 449  Q
    |||| ||||||||||||||||||||||||||||||| |||| |||||||    |||| ||| |||||||||||| || |||||||||||    
T  2272342 catttggggttggcctagtggttgacttgggatcttagagtttgctcctacagaggtctcaggtttgattccctctgatgccaatttcg 2272430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 360 - 476
Target Start/End: Original strand, 17447271 - 17447387
Alignment:
Q  360 tcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaact 459  Q
    ||||| |||||||||| | ||||||| ||| |||||||||||||||| |||| ||||| ||  ||||||||| || ||||||||||||  | |||||| |    
T  17447271 tcatttggggttggcccaatggttgatttgagatcttggagtgtgcttctctgaaggtctctggtttgattctctctggtgccaattttagtggacaatt 17447370  T
Q  460 ccatacagagctttgct 476  Q
    ||||||| ||| |||||    
T  17447371 ccatacaaagccttgct 17447387  T

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Target: chr1; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 23232464 - 23232352
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||| |||||||||||||||||||||||||||| ||| ||||| ||   |||||||| ||| |||||||| ||| ||||||||||| || | || |    
T  23232464 catttgggattggcctagtggttgacttgggatcttgaagtttgctcttccagaggtttcaggttcgattccctctggcgccaatttcggtgggctaagt 23232365  T
Q  460 ccatacagagctt 472  Q
    |||||||||||||    
T  23232364 ccatacagagctt 23232352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 555
Target Start/End: Complemental strand, 1095198 - 1095013
Alignment:
Q  357 aactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggaca 456  Q
    |||| ||| |||||||| |||||||||| |||||||||||||||||| || |||        ||||||| |||| | | ||||||||||||||| || ||    
T  1095198 aacttatttggggttggtctagtggttggcttgggatcttggagtgttcttctc--------tcaagttcgatttcttctggtgccaatttcggtgggca 1095107  T
Q  457 actccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggata 555  Q
    | | |||||||||||||||     ||||||||||||| || |||||||||||   || ||||||||| | |||| |||||||||||||| |||||||||    
T  1095106 agtacatacagagctttgc-agctctggcttagaacg-gggccccgcaagtg---ggtgggattggttccctcggattagtcggtccttagatcggata 1095013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 377 - 476
Target Start/End: Complemental strand, 19034569 - 19034470
Alignment:
Q  377 agtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgct 476  Q
    ||||||||  ||||||||||||||| || |||||  ||||||||| ||| ||||  || ||||||||||||||| || ||| ||||||||||||||||||    
T  19034569 agtggttggtttgggatcttggagtttgttcctcaaaaggtttcaggttcgattatctctggtgccaatttcggtgggcaagtccatacagagctttgct 19034470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 387 - 563
Target Start/End: Complemental strand, 36156061 - 36155889
Alignment:
Q  387 ttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgctttggctggc 485  Q
    ||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || ||||| |||||||| ||||| | |       
T  36156061 ttgggatcttggagtttgctcctccagaggtgtcaggttcgattccctctggtgccaatttcggtgggccaagtccatgcagagctt-gctttagtt--- 36155966  T
Q  486 ttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||| |||  |||||||||| |||||||| ||||||||| |  || ||||||||| | |||||||||||||||||||||    
T  36155965 tta-aacagggcccccgcaggtgggcggtgggattggtcccttcaaattagtcgattcttggatcggataccgagttt 36155889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 476
Target Start/End: Original strand, 37047010 - 37047105
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgct 476  Q
    |||| ||||||| |||||||||||||||||||||||| ||| |||||||||||  |||| | ||||| || || | | ||||||||||||||||||    
T  37047010 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgattccccctggtacaaattttggtgggctagtccatacagagctttgct 37047105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 39714845 - 39714779
Alignment:
Q  367 gggttggcctagtgg--ttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattc 431  Q
    |||||||| ||||||  ||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  39714845 gggttggcatagtggcgttggcttgggatcttggagtgtgctcctctcaaggtctcaagtttgattc 39714779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 357 - 431
Target Start/End: Original strand, 26608176 - 26608249
Alignment:
Q  357 aactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattc 431  Q
    |||||||| |||||||||||||||||||| || |||||||| | ||||||||||||||||| ||| |||||||||    
T  26608176 aactcatttggggttggcctagtggttgaatt-ggatcttgaattgtgctcctctcaaggtctcatgtttgattc 26608249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 352 - 543
Target Start/End: Complemental strand, 29057545 - 29057359
Alignment:
Q  352 aaattaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggc 451  Q
    |||| ||| |||| |||||||||||||||||||  ||||||||||||||| |||| |||  ||||| ||| ||| |||||||| | ||||||||||||      
T  29057545 aaatcaacccatttggggttggcctagtggttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgattccctcttgtgccaatttcgat 29057446  T
Q  452 ggacaactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtcc 543  Q
    ||  || || ||||||||| |||||    |||||||  |||| | ||||||||| ||||||  | ||||||| | ||| |||||||||||||    
T  29057445 ggtaaagtctatacagagc-ttgct----ctggctttcaacgggacccccgcaaatgggcgatgtgattggtcccctcaaattagtcggtcc 29057359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 356 - 563
Target Start/End: Original strand, 31162743 - 31162946
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    ||||||||| ||||||| |||||||||||  ||| ||||||||| |||| | |||| ||||||| | | | ||||| || |||| |||||||||| ||||    
T  31162743 taactcatttggggttgacctagtggttggtttgagatcttggattgtgtttctcttaaggttttaggctcgattcactctggtaccaatttcggtggac 31162842  T
Q  456 aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggata 555  Q
    |  | ||||||| ||||||||    || ||||  || | ||||| | |||||| || | | |||||||  |||| ||||||||| |||||| ||||||||    
T  31162843 aggtacatacagtgctttgct----ctagctttaaatggggcccacacaagtgagcagtgagattggtcatctctaattagtcgatccttgaatcggata 31162938  T
Q  556 ccgagttt 563  Q
    ||||||||    
T  31162939 ccgagttt 31162946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 356 - 476
Target Start/End: Original strand, 2782984 - 2783102
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    ||||||||| || ||| ||||  | ||||| ||||||||||| ||| || |||||| ||||||||||||| ||||   |||| |||||||||||| ||||    
T  2782984 taactcatttggagttagcctgttagttgatttgggatcttgaagtttgttcctcttaaggtttcaagttcgatt--ttatgttgccaatttcggtggac 2783081  T
Q  456 aactccatacagagctttgct 476  Q
    || |||||| |||||||||||    
T  2783082 aagtccatatagagctttgct 2783102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 20487389 - 20487300
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| ||||||||  ||||||||| || ||||||||||||| ||||||||   |||| ||||||| |||||||| |||||||||||||||    
T  20487389 catttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcgg 20487300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 369 - 450
Target Start/End: Complemental strand, 25496679 - 25496598
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||||||||| ||| |||||||||||||||  ||||||||| ||||| ||||||| |||||||| | ||||| |||||||    
T  25496679 gttggcctagtgattggcttgggatcttggagattgctcctcttaaggtctcaagttcgattccctctagtgcctatttcgg 25496598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 354 - 450
Target Start/End: Original strand, 7946835 - 7946931
Alignment:
Q  354 attaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||| |||| ||||| | ||||||||||| |||| ||||||| ||| ||||||||   |||| ||||||| |||||||| |||||||||||||||    
T  7946835 attaacccatttggggtcgacctagtggttggcttgagatcttgaagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcgg 7946931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 366 - 450
Target Start/End: Complemental strand, 46113596 - 46113512
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||   |||| ||| ||| |||||||| |||| ||||||||||    
T  46113596 ggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtaccaatttcgg 46113512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 52135128 - 52135322
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| |||||||| ||||||||||||||||||||||||||| ||||| |||||| || ||| ||| ||||  || | ||||||||| ||| || ||| ||    
T  52135128 catttggggttggtctagtggttgacttgggatcttggagtttgctcatctcaatgtctcaggttcgattatctctagtgccaattccggtgggcaaatc 52135227  T
Q  461 catacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgag 560  Q
    ||     ||||||||| |||||   ||  || |  ||| | |||||||| ||| ||||||||| | |||  |||||||||| |||||||||||||| |||    
T  52135228 ca-----agctttgctctggct---tttaaatggagccactgcaagtggacggtgggattggtcccctcatattagtcggttcttggatcggatactgag 52135319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 356 - 450
Target Start/End: Original strand, 2537697 - 2537785
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| |||| |||||||||||||||||||  ||||||||||      ||||||||||||||| ||| |||||||||| | |||||||||||||||    
T  2537697 taacccatttggggttggcctagtggttggattgggatctt------tgctcctctcaaggtctcaggtttgattccatttggtgccaatttcgg 2537785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 369 - 447
Target Start/End: Complemental strand, 8177247 - 8177166
Alignment:
Q  369 gttggcctagtggt--tgacttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||||||||||||  || |||||||||| |||||||||||||| ||||||||||| ||| ||||| || ||||||||||||    
T  8177247 gttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaattt 8177166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 8254835 - 8254753
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| ||||||||||||||||||| ||||||| | | || |||||||||| | |||| ||||||||||||||||    
T  8254835 ctggctttaaacggggcccccgcaagtgggcggtgggattgatccccttgaattagtcgattcttgaatcggataccgagttt 8254753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 447
Target Start/End: Original strand, 19480552 - 19480618
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||||||||||||||||||||||||||||||||||| |||  || |||||||   |||||||||||    
T  19480552 gttgacttgggatcttggagtgtgctcctctcaaggtctcacattcgattccccgcggtgccaattt 19480618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 369 - 450
Target Start/End: Original strand, 168207 - 168288
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||||||||||||| ||||||||||| |||| ||||| |   ||||| ||| ||| |||||||| |||||||||||||||    
T  168207 gttggcctagtggttggcttgggatcttagagtttgctctttcaaaggtctcaggttcgattccctctggtgccaatttcgg 168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 357 - 450
Target Start/End: Original strand, 1378739 - 1378832
Alignment:
Q  357 aactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||||| |||||||| |||||||||||||||| |||||||||| | ||||||  ||||| ||| ||| ||||  || ||||| |||||||||    
T  1378739 aactcatttggggttggtctagtggttgacttggaatcttggagtttactcctccaaaggtctcatgttcgattttctctggtgtcaatttcgg 1378832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 373 - 482
Target Start/End: Original strand, 10059065 - 10059174
Alignment:
Q  373 gcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctt 472  Q
    ||||||||||||||||| ||||||||||| |||||||||||| || ||| |||| |||| || |  || ||||||||  || ||| | ||||||||| ||    
T  10059065 gcctagtggttgacttgagatcttggagtttgctcctctcaaagtctcaggtttaattctctctaatgtcaatttcgatgggcaagttcatacagagttt 10059164  T
Q  473 tgctttggct 482  Q
    || |||||||    
T  10059165 tgttttggct 10059174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 379 - 476
Target Start/End: Complemental strand, 20907442 - 20907345
Alignment:
Q  379 tggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgct 476  Q
    ||||||||||  ||| || |||||||||||||||||||| ||| |||  |||| || ||||||||||||| | ||  || ||||||||||||||||||    
T  20907442 tggttgactttcgattttagagtgtgctcctctcaaggtctcacgttcaattcactttggtgccaatttcagtgggtaagtccatacagagctttgct 20907345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 33185030 - 33185075
Alignment:
Q  313 ataatactataaagtacaaacaaacttatatttaatataaaattaa 358  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  33185030 ataatactataaagtataaacaaacatatatttaatataaaattaa 33185075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 368 - 450
Target Start/End: Original strand, 39012301 - 39012385
Alignment:
Q  368 ggttggcctagtggt--tgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||||||||||||  || ||||||| |||||||||||||| ||||||||| | | |||||||||||   ||||||||||||||    
T  39012301 ggttggcctagtggtgttggcttgggaccttggagtgtgctcttctcaaggtcttaggtttgattcccctcggtgccaatttcgg 39012385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 381 - 450
Target Start/End: Complemental strand, 45859222 - 45859153
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| |||||||||||||||| |||||||||  |||| ||| ||| |||||||| |||||||||||||||    
T  45859222 gttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcgg 45859153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 495 - 563
Target Start/End: Original strand, 23041650 - 23041718
Alignment:
Q  495 ggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||| |||||||||| | | ||||||||| | ||||||||||||| | |||||||||||||||||||||    
T  23041650 ggcctccgcaagtggacagtgggattggtcccctcgaattagtcgattcttggatcggataccgagttt 23041718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 367 - 466
Target Start/End: Original strand, 809226 - 809325
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccataca 466  Q
    |||||||||| |||||||  ||||||||||||||| | ||||||| ||||| ||| |||||||| ||  | ||| ||||||||| || ||| ||||||||    
T  809226 gggttggcctcgtggttggtttgggatcttggagtttactcctcttaaggtctcaggtttgattacccctagtgtcaatttcggtgggcaagtccataca 809325  T

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Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 496 - 563
Target Start/End: Original strand, 22910000 - 22910067
Alignment:
Q  496 gcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||||||||| |||||| || | |||| |||||||| | ||| |||||||||||||||||    
T  22910000 gcccccgcaagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagttt 22910067  T

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Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 449
Target Start/End: Original strand, 21726734 - 21726815
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcg 449  Q
    ||||| |||||||||||| ||||| ||||| ||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||    
T  21726734 ggttgacctagtggttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcg 21726815  T

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Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 356 - 413
Target Start/End: Original strand, 37349516 - 37349573
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctca 413  Q
    ||||||||| ||||||||  |||||||||||||| |||||| |||| |||||||||||    
T  37349516 taactcatttggggttggtttagtggttgacttgagatcttagagtttgctcctctca 37349573  T

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Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 367 - 447
Target Start/End: Original strand, 8904423 - 8904506
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||||||||||| ||  ||||||||||| |  ||||||||||||| ||||||| ||||||| ||||| || ||||||||||||    
T  8904423 gggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaattt 8904506  T

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Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 495 - 563
Target Start/End: Complemental strand, 26513217 - 26513149
Alignment:
Q  495 ggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||| ||||||||||| |||| |||| | |||| |||||||| | ||||||||| |||||||||||    
T  26513217 ggcccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagttt 26513149  T

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Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 495 - 563
Target Start/End: Original strand, 27159213 - 27159281
Alignment:
Q  495 ggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||||| ||| ||||||||| | |||  |||||||| || |||||||||||| |||||||    
T  27159213 ggcccccgcaagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagttt 27159281  T

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Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 339
Target Start/End: Original strand, 32226035 - 32226179
Alignment:
Q  186 cataatagtcaatcccggataatggtgtgtagcggttgaccctaaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatt 285  Q
    |||| ||||||||| ||||||  ||||||||||||  ||||| |||||||||||||        | ||||||||| ||| |||||  |  ||  ||||||    
T  32226035 catagtagtcaatctcggatagcggtgtgtagcggccgaccccaaaagtgggatag--------cgtatagcggtttgacaaatagtggtcaccgatatt 32226126  T
Q  286 tgattattttttggacaagttacatgtataatactataaagtacaaacaaactt 339  Q
    |||||||||||||| ||| ||||||| |||||  ||||||||| ||||||||||    
T  32226127 tgattattttttgg-caaattacatgaataatggtataaagtataaacaaactt 32226179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 367 - 447
Target Start/End: Complemental strand, 33700840 - 33700757
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||||||||||||||  || ||||| |||| |||||||||||||| ||||||| ||| ||| ||||| || ||||||||||||    
T  33700840 gggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 33700757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 354 - 449
Target Start/End: Complemental strand, 18533930 - 18533835
Alignment:
Q  354 attaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcg 449  Q
    |||||| |||| ||||||| | |||||||||||||| |||||| |||| ||||||||   |||| |||  |||||||| || | ||||||||||||    
T  18533930 attaacccatttggggttgacatagtggttgacttgagatcttagagtttgctcctccagaggtatcagatttgattctctctagtgccaatttcg 18533835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 34965334 - 34965413
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    |||| ||||| |||||||||||  |||||| |||||  |||||| ||||||||| ||| |||| ||| ||||||||||||    
T  34965334 ggtttgcctaatggttgacttgaaatcttgaagtgtattcctcttaaggtttcatgttcgatttcctctggtgccaattt 34965413  T

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Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 38939226 - 38939277
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattc 431  Q
    ||||| ||||||| |||||||||||||||||||||||| ||  |||||||||    
T  38939226 ggttggcttgggaccttggagtgtgctcctctcaaggtctctggtttgattc 38939277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 448
Target Start/End: Complemental strand, 41470661 - 41470594
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttc 448  Q
    |||| |||| || |||||||| ||||||||||||||| ||||||| ||||||| |  |||||||||||    
T  41470661 gttggcttgagaccttggagtatgctcctctcaaggtctcaagttcgattccccacagtgccaatttc 41470594  T

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Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 358
Target Start/End: Complemental strand, 44288089 - 44288030
Alignment:
Q  299 gacaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaattaa 358  Q
    ||||| ||||||  ||||||||||||| || |||||||| ||||| ||||||||||||||    
T  44288089 gacaaattacataaataatactataaattataaacaaacatatatctaatataaaattaa 44288030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 433
Target Start/End: Complemental strand, 44417507 - 44417460
Alignment:
Q  386 cttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccc 433  Q
    ||||||| ||||||||||||| |||||||||| ||| |||||||||||    
T  44417507 cttgggaccttggagtgtgctgctctcaaggtctcaggtttgattccc 44417460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 408
Target Start/End: Original strand, 47091688 - 47091735
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcc 408  Q
    |||| ||||||||||||||||||| |||| ||||||||||| ||||||    
T  47091688 catttggggttggcctagtggttggcttgagatcttggagtttgctcc 47091735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 563
Target Start/End: Original strand, 48699888 - 48699955
Alignment:
Q  496 gcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||||||||| ||||||| | |  ||| |||||||| | ||||||||||||| |||||||    
T  48699888 gcccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagttt 48699955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 367 - 409
Target Start/End: Original strand, 6776148 - 6776190
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcct 409  Q
    ||||||||||||||||||  ||||||||||||||| |||||||    
T  6776148 gggttggcctagtggttggtttgggatcttggagtttgctcct 6776190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 367 - 446
Target Start/End: Complemental strand, 49101835 - 49101754
Alignment:
Q  367 gggttggcctagtg--gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatt 446  Q
    ||||||||||||||  |||| |||  || |||||||||||||||||||||||| | |  ||||||||||  |||||||||||    
T  49101835 gggttggcctagtgttgttggcttcagaccttggagtgtgctcctctcaaggtcttacatttgattccccctggtgccaatt 49101754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 14258626 - 14258577
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    |||| ||| ||||||||||||||| |||||||||||||||| || |||||    
T  14258626 catttgggcttggcctagtggttggcttgggatcttggagtttgttcctc 14258577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 563
Target Start/End: Original strand, 24217139 - 24217172
Alignment:
Q  530 gaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||||||| |||||||||||||||||    
T  24217139 gaattagtcggtccttagatcggataccgagttt 24217172  T

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Target: scaffold0576 (Bit Score: 83; Significance: 7e-39; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 5281 - 5083
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||  ||||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  5281 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 5182  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||| ||||||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  5181 ccatacagagctt-gct----ctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 5087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 7e-39; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 15360297 - 15360099
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||  ||||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  15360297 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 15360198  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||| ||||||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  15360197 ccatacagagctt-gct----ctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 15360103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 387 - 562
Target Start/End: Complemental strand, 17149629 - 17149458
Alignment:
Q  387 ttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttggctggct 486  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||| |||||| ||||||||  | ||| |||||||||||| |||||||||||   |    
T  17149629 ttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgctaatttcggttggcaagtccatacagagccttgctttggct---t 17149533  T
Q  487 tagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagtt 562  Q
    || || | ||||||||||||||  ||| ||||||||| | |||||||||||||||||||| ||| |||||||||||    
T  17149532 ta-aatggggcccccgcaagtgaacggtgggattggtcccctcgaattagtcggtccttgaatcagataccgagtt 17149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 9238973 - 9239171
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg-cggacaact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| |||||||||||||||  ||  || |    
T  9238973 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggttaagt 9239072  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||| ||||| |||||||||||   ||| || | ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  9239073 ccatatagagc-ttgctttggct---tta-aatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 9239167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 366 - 562
Target Start/End: Original strand, 10377718 - 10377911
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatac 465  Q
    |||||||||| ||| |||| |||| ||||||||||||||||| | ||||||| ||| |||  ||||||||||||||||||||||| || ||| |||||||    
T  10377718 ggggttggcccagttgttggcttgagatcttggagtgtgctcatgtcaaggtctcaggttcaattccctatggtgccaatttcggtgggcaagtccatac 10377817  T
Q  466 agagctttgctttggctggcttagaacgagg-cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagtt 562  Q
    | |||||||||    ||| |||| |||| || ||||| ||||||||||| || |||||| | |||| | |||||||||||||||| ||||||||||||    
T  10377818 atagctttgct----ctgacttaaaacggggccccccacaagtgggcggtggcattggtcccctcggagtagtcggtccttggattggataccgagtt 10377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 355 - 563
Target Start/End: Original strand, 34147338 - 34147542
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||| ||||| ||   | || ||| ||| |||||||| ||||||||||||||| ||     
T  34147338 ttaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcggtggg 34147437  T
Q  455 c-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
    | || |||||||||||||| |||    |||||||  |||| | ||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||    
T  34147438 ctaagtccatacagagctt-gct----ctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgga 34147532  T
Q  554 taccgagttt 563  Q
    ||||||||||    
T  34147533 taccgagttt 34147542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 355 - 563
Target Start/End: Original strand, 34159954 - 34160158
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||| ||||| ||   | || ||| ||| |||||||| ||||||||||||||| ||     
T  34159954 ttaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttcggtggg 34160053  T
Q  455 c-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
    | || |||||||||||||| |||    |||||||  |||| | ||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||    
T  34160054 ctaagtccatacagagctt-gct----ctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgga 34160148  T
Q  554 taccgagttt 563  Q
    ||||||||||    
T  34160149 taccgagttt 34160158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 654345 - 654147
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||| |||||||||||| ||||||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  654345 catttgggtttggcctagtggctgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 654246  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||| ||||||||||||||| ||||||||| | |||| |||||||| |  ||||||||||||||||    
T  654245 ccatacagagctt-gct----ctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccga 654151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 356 - 523
Target Start/End: Original strand, 9208245 - 9208408
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| |||||||  ||||||||||  ||||||||||||||| ||||||||||||||| ||| ||| |||||||  ||||||||||||||| || |    
T  9208245 taacccatttggggttgttctagtggttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattccccctggtgccaatttcggtgggc 9208344  T
Q  456 aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggt 523  Q
    || |||||||||||| |||||||||||   ||| || | ||||||||||||||||||| |||||||||    
T  9208345 aagtccatacagagccttgctttggct---tta-aatggggcccccgcaagtgggcggtgggattggt 9208408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 366 - 563
Target Start/End: Original strand, 11448874 - 11449067
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccata 464  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| ||||| || ||||||||||||||| || | || ||||||    
T  11448874 ggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccata 11448973  T
Q  465 cagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||| |||||||| |||||||    
T  11448974 cagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagttt 11449067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 21982519 - 21982322
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||| ||| ||||||||   |||| | | ||| ||||||| |||||||||||||| | || | || |    
T  21982519 catttggggttggcctagtggttggcttgggatcttgaagtttgctcctccagaggtctgaggttcgattcccgatggtgccaatttcagtgggctaagt 21982420  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  21982419 ccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggt-ccctcggattagtcgattcttggatcggataccga 21982326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 355 - 563
Target Start/End: Complemental strand, 3222839 - 3222637
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    ||||| |||| ||||||||||||||||||| |||||||||||| ||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| ||     
T  3222839 ttaacccatttggggttggcctagtggttggcttgggatcttgcagtttgctcctc-agaggtctcaggttcgattccctctggtgccaatttcggtggg 3222741  T
Q  455 c-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
    | || |||||||||||| |||||    ||| |||  |||| || |||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||    
T  3222740 ctaagtccatacagagc-ttgct----ctgtctttaaacg-gggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgga 3222647  T
Q  554 taccgagttt 563  Q
    ||||||||||    
T  3222646 taccgagttt 3222637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 356 - 563
Target Start/End: Original strand, 28672060 - 28672263
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||| |||||||||  |||| | | ||| |||||||| ||||| |||||| || || |    
T  28672060 taacccatttggggttggcctagtggttgacttgagatcttggagtttgctcctctagaggtcttaggttcgattccctctggtgtcaattttggtgggc 28672159  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || |||||||||||| ||| |||||||   ||| |||| | ||| ||||||||||||| ||||||||| | |||| |||||||| | |||||||| |||    
T  28672160 taagtccatacagagc-ttgttttggct---tta-aacgggcccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagat 28672254  T
Q  555 accgagttt 563  Q
    |||||||||    
T  28672255 accgagttt 28672263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 361 - 463
Target Start/End: Original strand, 8479310 - 8479412
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| |||| ||| ||||| ||||||||| || ||| ||    
T  8479310 catttggggttggcctagtggttgacttgggatcttggagtgtgctcctcttaagatttcaggttcgatttcctctggtgtcaatttcggtgggcaagtc 8479409  T
Q  461 cat 463  Q
    |||    
T  8479410 cat 8479412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 182 - 356
Target Start/End: Original strand, 15584523 - 15584697
Alignment:
Q  182 aaagcataatagtcaatcccggataatggtgtgtagcggttgaccctaaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattga 281  Q
    ||||||||||||||||| |  ||||  ||||||| |||| |||||| ||||||||||||  | |||| ||||||||||||||| ||||| |   || |||    
T  15584523 aaagcataatagtcaattctagatagcggtgtgtcgcggatgaccccaaaagtgggataacatgataacatatagcggtatgacaaatagcagtcactga 15584622  T
Q  282 tatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaatt 356  Q
    ||||| ||||  ||||||| || ||||||| ||||||| |||||||| |||||||  | ||||||||||||||||    
T  15584623 tatttaattagattttggaaaaattacatgaataataccataaagtataaacaaaactgtatttaatataaaatt 15584697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 356 - 563
Target Start/End: Original strand, 33499467 - 33499671
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtt-tgattccctatggtgccaatttcggcgga 454  Q
    |||| |||| ||||||||||| ||||||| |||||||||||||||| ||||||||||||||| ||| |||  |||||||| ||||| ||||||||| ||     
T  33499467 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcctctcaaggtctcaggttcagattccctctggtgtcaatttcggtggg 33499566  T
Q  455 caactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
    | | |||||||| | |||||||||||||   ||| || | | || || ||||||||||| ||||||||| | |||| ||||||| ||   |||| |||||    
T  33499567 ctagtccatacaaatctttgctttggct---tta-aatgggccctccacaagtgggcggtgggattggtcccctcggattagtcagttgatggaccggat 33499662  T
Q  555 accgagttt 563  Q
    |||||||||    
T  33499663 accgagttt 33499671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 375 - 563
Target Start/End: Complemental strand, 17081239 - 17081055
Alignment:
Q  375 ctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagcttt 473  Q
    |||||||||| ||| |||||||||||| ||||||||   | || |||||||||||||||| ||||| ||||||||| || | || |||||||||||| ||    
T  17081239 ctagtggttggcttaggatcttggagtttgctcctccagatgtctcaagtttgattccctctggtgtcaatttcggtgggctaagtccatacagagc-tt 17081141  T
Q  474 gctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||    ||| |||  || | ||||||||||||||||||| ||||||||| | ||||||| ||| | | ||||||||| |||||||||||    
T  17081140 gct----ctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcgaataagttgtttcttggatcgaataccgagttt 17081055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 375 - 555
Target Start/End: Original strand, 3907553 - 3907727
Alignment:
Q  375 ctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttg 474  Q
    ||||||||||  |||||||||||| |||||||||||||||| ||||||||| ||||| || ||||||||||||  |||| ||| ||||||||   |||||    
T  3907553 ctagtggttggtttgggatcttggggtgtgctcctctcaagatttcaagttcgattctctctggtgccaattt-tgcgggcaagtccatacaagactttg 3907651  T
Q  475 ctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggata 555  Q
    ||    |||| |||||||| ||||||||||| ||| ||| | ||||| | |||||  |||||||| |||||||||| ||||    
T  3907652 ct----ctggtttagaacg-ggcccccgcaaatggacggtgagattgatcctctcagattagtcgttccttggatcagata 3907727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 472
Target Start/End: Original strand, 12591635 - 12591747
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||  ||||| ||| ||| |||||||| | ||||||||||| | || | || |    
T  12591635 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctcgtgccaatttcagtgggctaagt 12591734  T
Q  460 ccatacagagctt 472  Q
    |||||||||||||    
T  12591735 ccatacagagctt 12591747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 356 - 563
Target Start/End: Complemental strand, 21148714 - 21148512
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctca-aggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    |||| |||| || |||||||||||||||| |||||||||||||||| ||||  | ||| |||| ||||||| |||||||| | ||||||||||||  ||     
T  21148714 taacccatttggagttggcctagtggttggcttgggatcttggagtttgctttt-tcagaggtctcaagttcgattccctctagtgccaatttcgatggg 21148616  T
Q  455 c-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
    | || |||||||||||||| |||    ||| |||  |||| |||||| |||||||||||| ||||||||| | |||| |||||||| | |||| ||||||    
T  21148615 ctaagtccatacagagctt-gct----ctgactttaaacggggcccc-gcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcgga 21148522  T
Q  554 taccgagttt 563  Q
    ||||||||||    
T  21148521 taccgagttt 21148512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 380 - 556
Target Start/End: Complemental strand, 28742021 - 28741849
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttg 479  Q
    ||||||| |||||||||||||||||||||||||||||| ||| ||| |||||  | |||||  ||||| || |||  | |||||| ||| || ||||       
T  28742021 ggttgacctgggatcttggagtgtgctcctctcaaggtctcaggttcgattcgttctggtgttaattttggtggatgagtccatatagaactctgct--- 28741925  T
Q  480 gctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggatac 556  Q
     |||||||| ||||   ||||| ||| |||  || | ||||||| ||||||||||||||||||||||||||||||||    
T  28741924 -ctggcttaaaacggaacccccacaaatggatggtgtgattggtcctctcgaattagtcggtccttggatcggatac 28741849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 369 - 563
Target Start/End: Complemental strand, 5360262 - 5360072
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacag 467  Q
    |||||||| ||||||| |||||||||||||||| |||| |||   |||| ||| ||| |||||||| |  |||||||||||| || | || |||||||||    
T  5360262 gttggcctggtggttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccctctaatgccaatttcggtgggctaagtccatacag 5360163  T
Q  468 agctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||| |||    ||| |||  ||||   ||||| ||||||||||| ||||||||| | ||||||||||||| | ||| |||||||||||||||||    
T  5360162 agctt-gct----ctgactttaaacggaacccccacaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgagttt 5360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 498 - 563
Target Start/End: Complemental strand, 14504148 - 14504083
Alignment:
Q  498 ccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||||||| ||||||| | ||||||||||||||| |||||| ||||||||||||||||    
T  14504148 ccccgcaagtgggcggtgggattgatcctctcgaattagtcgatccttgtatcggataccgagttt 14504083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 1344935 - 1345131
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||| |||||||||||   |||||||||||||| || |||||   |||| ||| ||| |||||||| ||||||||||||| | || | || |    
T  1344935 catttggggttgacctagtggttgg--tgggatcttggagtttgttcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagt 1345032  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||| ||||| |||    |||||||  |||| | ||||||||||||| ||| ||||||||| | || | |||||||| | |||||||||||||||||    
T  1345033 ccatacaaagctt-gct----ctggctttaaacgggccccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccga 1345127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 9843936 - 9844134
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg-cggacaact 459  Q
    |||| |||||||| |||||||||| |||||||||||||||| |||||||||  |||| ||| ||| || | ||| ||||| |||||| ||  ||  || |    
T  9843936 catttggggttggtctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgacttcctctggtgtcaattttggtgggttaagt 9844035  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| ||| |    |||||||  |||| ||||||| ||||||||||| | ||||||| |  ||| |||||||| | ||||||||||||| |||    
T  9844036 ccatacagagc-ttgtt----ctggctttaaacggggccccctcaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggatatcga 9844130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 436 - 563
Target Start/End: Original strand, 17225740 - 17225862
Alignment:
Q  436 tggtgccaatttcggcggacaactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaatta 535  Q
    |||||||||||||||||| ||| ||||||||||||||||||    || | |||||||| || |||||||| ||||||| ||||||| |   |||  ||||    
T  17225740 tggtgccaatttcggcgggcaagtccatacagagctttgct----ctcgtttagaacg-gggccccgcaaatgggcggtgggattgatctcctcagatta 17225834  T
Q  536 gtcggtccttggatcggataccgagttt 563  Q
    |||||||||| ||||||||| |||||||    
T  17225835 gtcggtccttagatcggatatcgagttt 17225862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 356 - 446
Target Start/End: Original strand, 22576060 - 22576150
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatt 446  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| |||  || |||||||| |||||||||||    
T  22576060 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaatt 22576150  T

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Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 361 - 476
Target Start/End: Original strand, 17420863 - 17420979
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgatt-ccctatggtgccaatttcggcggacaact 459  Q
    |||| |||||||| ||| ||||||||||||||||||||||||| ||||| ||||||| |   |||||||| |||| | ||||||||||||| ||  || |    
T  17420863 cattcggggttggtctaatggttgacttgggatcttggagtgtactcctttcaaggtctttggtttgattcccctcttgtgccaatttcggtgggtaagt 17420962  T
Q  460 ccatacagagctttgct 476  Q
     |||||| |||||||||    
T  17420963 tcatacatagctttgct 17420979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 356 - 563
Target Start/End: Original strand, 11007158 - 11007361
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| |||||||  |||||||||| |||||||||||||||| ||||||||  ||||| ||| ||| ||||| || || |  ||||||||| || |    
T  11007158 taacccatttggggttgatctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattcactctgctctcaatttcggtgggc 11007257  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || |||||||| ||||| |||    || ||||  | || ||||||||||||||||||| ||||||||  | |||| |||||||| | ||| ||||||||    
T  11007258 taagtccatacaaagctt-gct----ctagctttaagcggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattctttgatcggat 11007352  T
Q  555 accgagttt 563  Q
    ||| |||||    
T  11007353 acctagttt 11007361  T

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Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 31462448 - 31462511
Alignment:
Q  280 gatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatat 343  Q
    |||||||||||||||||| |||||  |||||| |||||||||||| ||| ||||||||||||||    
T  31462448 gatatttgattatttttttgacaaactacatgaataatactataaggtataaacaaacttatat 31462511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 9690721 - 9690639
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| ||||| | ||||||| ||| ||||||||| |||||| |||||||| | |||||||||||||||||||||    
T  9690721 ctggctttaaacggggccctcacaagtggacggtgggattggtcctctcggattagtcgattcttggatcggataccgagttt 9690639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 381 - 482
Target Start/End: Complemental strand, 6384053 - 6383953
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttgg 480  Q
    |||| ||||||| |||||||||||||||||||||||| || || || | |||||  |||||||||||| | || | | |||||| |||||||||||||||    
T  6384053 gttggcttgggaccttggagtgtgctcctctcaaggtctc-aggttcaatccctcgggtgccaatttcagtgggctagtccataaagagctttgctttgg 6383955  T
Q  481 ct 482  Q
    ||    
T  6383954 ct 6383953  T

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Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 361 - 450
Target Start/End: Original strand, 13753238 - 13753327
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| ||||||||||||||||||| ||| |||||||||||| ||||||||   |||| ||| |||  |||| || |||||||||||||||    
T  13753238 catttggggttggcctagtggttggctttggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcgg 13753327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 498 - 563
Target Start/End: Original strand, 14213013 - 14213078
Alignment:
Q  498 ccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||| || ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  14213013 ccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttt 14213078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 447
Target Start/End: Complemental strand, 12188370 - 12188287
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||||||||||||||  || ||||||| || |||||||||||||| ||||||||||||||| ||||| || | ||||||||||    
T  12188370 gggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaattt 12188287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 356 - 447
Target Start/End: Original strand, 14212885 - 14212976
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||||||| ||| ||| |||| |||||| || ||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||    
T  14212885 taactcatttgggattgacctaatggttggctcgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 14212976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 367 - 450
Target Start/End: Complemental strand, 6691617 - 6691532
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||||||| |||||  ||||||  || |||||||||||||||||||||||| ||| ||| ||||| ||  ||||||||||||||    
T  6691617 gggttggcctggtggtgttgactttagaccttggagtgtgctcctctcaaggtctcaggttcgattctctccggtgccaatttcgg 6691532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 378 - 455
Target Start/End: Complemental strand, 17706489 - 17706412
Alignment:
Q  378 gtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||||||||||||||||||||||| ||||||||   | || ||||||| |||||| | ||||| ||||||||| ||||    
T  17706489 gtggttgacttgggatcttggagtttgctcctccagaagtctcaagttcgattccttctggtgtcaatttcggtggac 17706412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 6164325 - 6164365
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctc 407  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  6164325 gggttgacctactggttgacttgggatcttggagtgtgctc 6164365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 398 - 450
Target Start/End: Original strand, 9583408 - 9583460
Alignment:
Q  398 gagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||||||||||||||||| || |||| ||||| || |||||||||||||||    
T  9583408 gagtgtgctcctctcaaggtctccagttcgattctctctggtgccaatttcgg 9583460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 2252008 - 2252063
Alignment:
Q  186 cataatagtcaatcccggataatggtgtgtagcggttgaccctaaaagtgggatag 241  Q
    |||||||||||||| ||||||  |||| ||||||| |||||| |||||||||||||    
T  2252008 cataatagtcaatctcggatagcggtgcgtagcggctgaccccaaaagtgggatag 2252063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 381 - 431
Target Start/End: Complemental strand, 9862216 - 9862166
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattc 431  Q
    |||||||||||| |||||||||||||||| ||||||| |||  ||||||||    
T  9862216 gttgacttgggaccttggagtgtgctcctttcaaggtatcatatttgattc 9862166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 10007212 - 10007265
Alignment:
Q  395 ttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttc 448  Q
    ||||||||| ||||||||||||| ||||||||||||  || ||||| |||||||    
T  10007212 ttggagtgtcctcctctcaaggtctcaagtttgattatctctggtgtcaatttc 10007265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 450
Target Start/End: Original strand, 21182344 - 21182413
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| |||||||| ||||||||||||||||||||| | | |  || |||||||| || ||||||||||||    
T  21182344 gttggcttgggattttggagtgtgctcctctcaagctctgagattcgattccctgtgatgccaatttcgg 21182413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 449
Target Start/End: Original strand, 28028539 - 28028623
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcg 449  Q
    |||||||||| |||||  |||||||||| ||| ||||| |||||||||||||| ||| ||| ||||| |  || |||||||||||    
T  28028539 gggttggcctggtggtgttgacttgggacctttgagtgagctcctctcaaggtctcatgttcgattctccctgatgccaatttcg 28028623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 368 - 433
Target Start/End: Complemental strand, 30345279 - 30345214
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccc 433  Q
    |||||||||| |||||| ||| |||| || ||||||| |||||| ||||| ||| |||||||||||    
T  30345279 ggttggcctaatggttggcttaggatttttgagtgtgatcctcttaaggtatcaggtttgattccc 30345214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 7e-39; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 40059051 - 40058853
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||||||||  |||| ||| ||| ||||| || ||||||||||||||| || | || |    
T  40059051 catttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagt 40058952  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  40058951 ccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 40058857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 52983617 - 52983815
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||| ||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||| | || | || |    
T  52983617 catttggggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagt 52983716  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  52983717 ccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 52983811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 25852212 - 25852411
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||  ||||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  25852212 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 25852311  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| ||||| |||||   ||| |||| | ||| |||||||||||   ||||||||| | |||| |||||||||| |||||| ||||||||||    
T  25852312 ccatacagagc-ttgctctggct---ttaaaacgggaccctcgcaagtgggcaatgggattggtcccctcggattagtcggttcttggaccggataccga 25852407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 34844957 - 34844759
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||  |||| ||||||||||| ||||||||   |||| ||| ||| ||||| || ||||||||||||||| || | || |    
T  34844957 catttggggttggcctagtggtttgcttgagatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagt 34844858  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  34844857 ccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccga 34844763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 54127541 - 54127343
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||  ||||| ||| |||  ||||||| | ||||||||||||| || | || |    
T  54127541 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctcttgtgccaatttcggtgggctaagt 54127442  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    | ||||||||| |||||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||||| |||||| ||||||| ||    
T  54127441 ctatacagagc-ttgct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggaccggatactga 54127347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 366 - 563
Target Start/End: Complemental strand, 27528989 - 27528796
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccata 464  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || ||||||    
T  27528989 ggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccata 27528890  T
Q  465 cagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||| |||||    |||||||   ||| ||||||||||||||||||| | ||||||| | |||| |||||||| | |||||||||||||||||||||    
T  27528889 cagagc-ttgct----ctggctttatacggggcccccgcaagtgggcggtgagattggtcccctcggattagtcgattcttggatcggataccgagttt 27528796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 32986195 - 32986393
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| |||  ||||||| ||||||||||||||| || | || |    
T  32986195 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggctaagt 32986294  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||    ||| |||  || | ||||||||||||||||||| ||||||||| | |||| | |||||| | |||||||||||||||||    
T  32986295 ccatacagagc-ttgct----ctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcggaatagtcgattcttggatcggataccga 32986389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 366 - 563
Target Start/End: Complemental strand, 9646410 - 9646217
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatac 465  Q
    |||||||| ||||||||||  |||||||||| |||||||||||| ||||||| ||| ||||||||| || || || |||||||   || ||| | |||||    
T  9646410 ggggttggtctagtggttggtttgggatctttgagtgtgctcctgtcaaggtctcatgtttgattctctctgatgacaatttcaatgggcaagttcatac 9646311  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    || ||||||||    ||||||||||||  |||| |||||||||||| | ||||||| | | |||| ||||||||||| ||||||||| ||||||||||    
T  9646310 agtgctttgct----ctggcttagaaccgggccaccgcaagtgggcagtgggattgatcccctcggattagtcggtcattggatcgggtaccgagttt 9646217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 355 - 563
Target Start/End: Complemental strand, 19660737 - 19660533
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg-cgg 453  Q
    ||||| |||| || |||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||||||||| || || ||| ||||||||  ||    
T  19660737 ttaacccatttggagttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattctctctgatgcaaatttcggtggg 19660638  T
Q  454 acaactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
    | || |||||||||||| |||||    |||||||  |||  ||||||||||||||||||| ||||||| | | |||| |||||||| | |||||||||||    
T  19660637 ataagtccatacagagc-ttgct----ctggctttaaacagggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcgga 19660543  T
Q  554 taccgagttt 563  Q
    ||||||||||    
T  19660542 taccgagttt 19660533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 367 - 563
Target Start/End: Complemental strand, 33696472 - 33696280
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatac 465  Q
    |||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| |||  ||||||| ||||||||||||||| || | || |||||||    
T  33696472 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatac 33696373  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||| |||||    |||||||  || | ||||||||||||||||||| | ||||||| |||||| |||||||  | ||||||||||||| |||||||    
T  33696372 agagc-ttgct----ctggctttaaatggggcccccgcaagtgggcggtgagattggtcctctcggattagtcaattcttggatcggatatcgagttt 33696280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 356 - 476
Target Start/End: Complemental strand, 41621800 - 41621680
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| |||||||||||| |||||| |||| ||||||||||| ||||||||||||||| ||| |||||||| ||| |||||||||||| || || |    
T  41621800 taacccatttggggttggcctaatggttggcttgagatcttggagtttgctcctctcaaggtctcatgtttgatttcctctggtgccaattttggtgggc 41621701  T
Q  456 aactccatacagagctttgct 476  Q
    || ||||||||||||||||||    
T  41621700 aaatccatacagagctttgct 41621680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 46714390 - 46714589
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttga-ttccctatggtgccaatttcggcggac-aac 458  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| || |||||| ||||||||||||||| || | ||     
T  46714390 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttccctttggtgccaatttcggtgggctaag 46714489  T
Q  459 tccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccg 558  Q
    ||||||||||||||  |     || ||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||  | |||| |||||||||||    
T  46714490 tccatacagagcttgcc-----cttgctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttgaatcggataccg 46714584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 20566347 - 20566546
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggt-ttcaagtttgattccctatggtgccaatttcggcggac-aac 458  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   ||||  ||| ||| |||||||| ||||||||||||||| || | ||     
T  20566347 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtgatcaggttcgattccctctggtgccaatttcggtgggcaaag 20566446  T
Q  459 tccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccg 558  Q
    |||||||||||| |||||    |||||||  ||||  |||||||||||||||||  ||||||||| | |||  |||||||| | ||||||||||||| ||    
T  20566447 tccatacagagc-ttgct----ctggctttaaacggagcccccgcaagtgggcgctgggattggtcccctcagattagtcgattcttggatcggatatcg 20566541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 357 - 563
Target Start/End: Complemental strand, 45787906 - 45787705
Alignment:
Q  357 aactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac- 455  Q
    |||||||| ||||||||||||||||||| ||||| |||||||| | ||||||||   || | ||| ||| |||||||| || |||||||||| | || |     
T  45787906 aactcatttggggttggcctagtggttggcttggaatcttggatt-tgctcctccagagatctcaggttcgattccctctgatgccaatttcagtgggct 45787808  T
Q  456 aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggata 555  Q
    || |||||||||||||| |||    |||||||  |||  ||||||||||||||| ||| ||||||||| | ||||||||||||| | |||||||||||||    
T  45787807 aagtccatacagagctt-gct----ctggctttaaacagggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttggatcggata 45787713  T
Q  556 ccgagttt 563  Q
    ||||||||    
T  45787712 ccgagttt 45787705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 357 - 559
Target Start/End: Original strand, 51535607 - 51535813
Alignment:
Q  357 aactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac- 455  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| ||||||||   |||| ||| ||| |||||||| |||||||||||| || || |     
T  51535607 aactcatttagggttggcctagtggttgacttgggatcttggagtttgctcctccacaggtctcaggttcgattccctctggtgccaattttggtgggct 51535706  T
Q  456 ----aactccatacagagctt--tgctttggctggcttagaacgaggccccc-gcaagtgggcggcgggattggtgctctcgaattagtcggtccttgga 548  Q
        || ||||||||||||||   |||    |||||||  |||| ||||||| |||||||||||| ||||||||| | ||||||||||||| | ||| ||    
T  51535707 aattaagtccatacagagcttgcagct----ctggctttaaacggggcccccagcaagtgggcggtgggattggtcccctcgaattagtcgattcttaga 51535802  T
Q  549 tcggataccga 559  Q
    |||||||||||    
T  51535803 tcggataccga 51535813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 381 - 562
Target Start/End: Complemental strand, 20078163 - 20077986
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgctttg 479  Q
    |||| |||||||||||||||| ||||||||   |||| ||| |||||||||||  ||||||||||||||| || | || |||||||||||||| |||       
T  20078163 gttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattcccactggtgccaatttcggtgggctaagtccatacagagctt-gct--- 20078068  T
Q  480 gctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagtt 562  Q
     |||||||  |||| |||||||| |||||||||| |||||| || | |||| |||||||| | ||||||||||||||||||||    
T  20078067 -ctggctttaaacggggcccccgtaagtgggcggtgggattagttccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 5609401 - 5609203
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaa-ggtttcaagtttgattccctatggtgccaatttcggcggac-aac 458  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||| | |||  ||| ||| ||| ||||| || ||||||||||||||| || | ||     
T  5609401 catttggggttggcctagtggttggcttgggatcttggagtttgctcat-tcagtggtctcaggttcgattctctctggtgccaatttcggtgggctaag 5609303  T
Q  459 tccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccg 558  Q
    |||||||||||||| |||    |||||||  || | ||||||||||||||| ||| ||||||| | | |||| |||||||| | ||||||||||||||||    
T  5609302 tccatacagagctt-gct----ctggctttaaatggggcccccgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggataccg 5609208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 373 - 563
Target Start/End: Original strand, 12710189 - 12710373
Alignment:
Q  373 gcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctt 472  Q
    ||||||||||||  ||||||||||||||| |||| |||| ||||| ||| ||| |||||||| |  || ||||||||| |||||| ||||||||| ||||    
T  12710189 gcctagtggttggtttgggatcttggagtatgcttctcttaaggtctcaggttcgattccctttaatgtcaatttcggtggacaagtccatacagtgctt 12710288  T
Q  473 tgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||    ||||||||||||   || |  ||||||| |||| |||||||||   |||  |||| |||||||||||||||||||||||||||    
T  12710289 tgct----ctggcttagaac--tgctctggcaagtgagcggagggattggtcacctcagattaatcggtccttggatcggataccgagttt 12710373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 366 - 563
Target Start/End: Original strand, 44343516 - 44343710
Alignment:
Q  366 ggggttggcctagtggtt-gacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccat 463  Q
    |||||||| ||||||||| | |||||||||||||||| |||||| |  ||||  ||||||| |||||||| |||||| ||||| || || | || |||||    
T  44343516 ggggttgggctagtggtttggcttgggatcttggagtttgctcccccaaaggactcaagttcgattccctctggtgctaattttggtgggctaagtccat 44343615  T
Q  464 acagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||| |||    ||| |||  |||| ||| ||||||||||||||| ||||||||| | ||||||||||||| | |||| ||||||||||||||||    
T  44343616 acagagctt-gct----ctgactttaaacggggctcccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttgaatcggataccgagttt 44343710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 229 - 339
Target Start/End: Complemental strand, 54857186 - 54857076
Alignment:
Q  229 aaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatttgattattttttggacaagttacatgtataatactataaagta 328  Q
    |||||||||||||  || |||| ||||||||||||| ||||| ||  ||  ||||||||||||||||||| |||| ||||||| |||||| |||||||||    
T  54857186 aaaagtgggatagcgggttagcgtatagcggtatgacaaatagcggtcacagatatttgattattttttgaacaaattacatgaataatagtataaagta 54857087  T
Q  329 caaacaaactt 339  Q
     ||||||||||    
T  54857086 taaacaaactt 54857076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 223 - 358
Target Start/End: Complemental strand, 8368160 - 8368023
Alignment:
Q  223 gaccctaaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatttgatta-ttttttggacaagttacatgtataatacta 321  Q
    |||||||||||||||||||  ||||| | ||||||||||||| ||||||||  ||   ||||||||| | |||||||||||| |||  || |||||||||    
T  8368160 gaccctaaaagtgggatagtgggatatcgtatagcggtatgacaaataacggtcaccaatatttgatcatttttttggacaaattatttggataatacta 8368061  T
Q  322 taaag-tacaaacaaacttatatttaatataaaattaa 358  Q
    ||||| |  ||| |||||||||||||||||||||||||    
T  8368060 taaagtttaaaaaaaacttatatttaatataaaattaa 8368023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 377 - 563
Target Start/End: Original strand, 7093390 - 7093567
Alignment:
Q  377 agtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgct 476  Q
    |||||||| |||||||||||||||||||||||| ||||||||| | ||| ||||| || |||||| ||||| || |||||  || |||||||||          
T  7093390 agtggttggcttgggatcttggagtgtgctcctttcaaggttttaggttcgattctctctggtgcaaattttggtggacatatctatacagagc------ 7093483  T
Q  477 ttggctggcttagaacgaggccc-ccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
         | ||||||||||   ||| ||| |||||||||| ||||||||| |  |||||||||||||||||||||||||||| |||||||    
T  7093484 ----atagcttagaacggccccctccgtaagtgggcggtgggattggtcccttcgaattagtcggtccttggatcggatatcgagttt 7093567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 366 - 563
Target Start/End: Complemental strand, 25969697 - 25969504
Alignment:
Q  366 ggggttggcctagtggttgacttggg-atcttggagtgtgctcctctcaaggtttc--aagtttgattccctatggtgccaatttcggcggacaactcca 462  Q
    |||||||||||| ||||||| ||||| |||||||||| |||||||||||||||  |  | ||| |||||||  ||||||||||||||| || ||| ||||    
T  25969697 ggggttggcctactggttgatttggggatcttggagtttgctcctctcaaggtcccagaggttggattccccctggtgccaatttcggtggccaagtcca 25969598  T
Q  463 tacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagtt 562  Q
    |||||| | |||||    |||||||  |||| |||||||| ||||| |||| ||||||||| | ||||||||||||| | |||| ||||||||| |||||    
T  25969597 tacagaac-ttgct----ctggctttaaacg-ggcccccgtaagtgagcggtgggattggt-ccctcgaattagtcgattcttgaatcggatactgagtt 25969505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 34559376 - 34559452
Alignment:
Q  279 tgatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaat 355  Q
    ||||||||||||||||| ||| ||| ||||||  |||||||||||||| | ||||||||||||||||||||||||||    
T  34559376 tgatatttgattattttatggtcaaattacatcaataatactataaagcataaacaaacttatatttaatataaaat 34559452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 427 - 563
Target Start/End: Original strand, 34723863 - 34723995
Alignment:
Q  427 gattccctatggtgccaatttcggcggac-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgc 525  Q
    |||||||| ||||||||||||||| || | || |||||||| ||||| |||    |||||||  |||| |||||||||||||||| || ||||||||| |    
T  34723863 gattccctctggtgccaatttcggtgggctaagtccatacaaagctt-gct----ctggctttaaacggggcccccgcaagtgggtggtgggattggtcc 34723957  T
Q  526 tctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||| |||||||| | |||||||||||||||||||||    
T  34723958 tctcggattagtcgattcttggatcggataccgagttt 34723995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 359 - 450
Target Start/End: Original strand, 34835525 - 34835616
Alignment:
Q  359 ctcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||| |||||||| |||||||||| ||||||||||| |||| ||||||||| ||||| ||| ||| |||||||| ||||| |||||||||    
T  34835525 ctcatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctctggtgtcaatttcgg 34835616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 351 - 434
Target Start/End: Original strand, 42245734 - 42245817
Alignment:
Q  351 aaaattaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccct 434  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||  ||| ||||||||    
T  42245734 aaaataaactcatttggggttggcctagtggttgacttgggatcttagagtttgctcctctaaaggtctcgggttcgattccct 42245817  T

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Target: chr4; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 380 - 482
Target Start/End: Complemental strand, 7392143 - 7392042
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttg 479  Q
    ||||| |||||||||||||||| ||||||||  ||||| ||| ||| |||||||||||||||||||||||| ||  || ||||||||||| |||||| ||    
T  7392143 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgccaatttcggtggttaagtccatacagag-tttgctctg 7392045  T
Q  480 gct 482  Q
    |||    
T  7392044 gct 7392042  T

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Target: chr4; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 13873494 - 13873405
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| ||||||||||||||||||  |||||||||||||||| |||||||   ||||| ||| ||| |||||||| |||||||||||||||    
T  13873494 catttggggttggcctagtggtttgcttgggatcttggagtttgctccttcaaaggtctcaggttcgattccctctggtgccaatttcgg 13873405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 191 - 343
Target Start/End: Complemental strand, 12050023 - 12049871
Alignment:
Q  191 tagtcaatcccggataatggtgtgtagcggttgaccctaaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatttgatt 290  Q
    ||||||||| | ||||  |||| ||||| | |||||| |||||||||||||  ||||| | ||||||||||| | ||||| ||  ||  |||||||||||    
T  12050023 tagtcaatctcagatagcggtgcgtagcagctgaccccaaaagtgggatagtgggataacgtatagcggtataacaaatagcggtcaccgatatttgatt 12049924  T
Q  291 attttttggacaagttacatgtataatactataaagtacaaacaaacttatat 343  Q
    || ||||| |||  ||||||| |||||  ||||||||| ||||||||||||||    
T  12049923 atgttttgaacatattacatgaataatgatataaagtataaacaaacttatat 12049871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 368 - 448
Target Start/End: Original strand, 19220538 - 19220618
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttc 448  Q
    ||||||| | |||||||||||  ||||||||||||||||||||||||||||||| ||| |||| ||| | |||||||||||    
T  19220538 ggttggcatggtggttgacttaagatcttggagtgtgctcctctcaaggtttcaggttcgatttcctctagtgccaatttc 19220618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 360 - 476
Target Start/End: Original strand, 41085023 - 41085139
Alignment:
Q  360 tcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaact 459  Q
    ||||| |||||||  ||||||||||||||| ||||||||||||| ||||| ||||||| | | ||| ||||| || || |||| ||||||  |||||| |    
T  41085023 tcatttggggttgatctagtggttgacttgagatcttggagtgtcctcctttcaaggtctaatgttcgattctctctgatgccgatttcgatggacaagt 41085122  T
Q  460 ccatacagagctttgct 476  Q
    ||||| |||||||||||    
T  41085123 ccatatagagctttgct 41085139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 280 - 343
Target Start/End: Complemental strand, 3125293 - 3125230
Alignment:
Q  280 gatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatat 343  Q
    |||||||||||||||||| ||||| ||||||| |||||||||| ||||| ||||||||||||||    
T  3125293 gatatttgattatttttttgacaaattacatgaataatactatgaagtataaacaaacttatat 3125230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 244 - 343
Target Start/End: Original strand, 51850415 - 51850514
Alignment:
Q  244 ggatagcatatagcggtatgataaataacgaccattgatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatat 343  Q
    ||||||| ||||| ||||||| ||||| ||  ||  |||||||||||||||||||||||| ||||||| |||||| ||||||| | | ||||||||||||    
T  51850415 ggatagcgtatagtggtatgacaaatagcggtcaccgatatttgattattttttggacaaattacatgaataatattataaagaatagacaaacttatat 51850514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 485 - 563
Target Start/End: Original strand, 13017831 - 13017908
Alignment:
Q  485 cttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||| | ||||||||||||||| | ||||||||| | |||| ||||||||||||||||||| ||||||||||||    
T  13017831 cttagaacgggacccccgcaagtgggcagtgggattggtccactcggattagtcggtccttggatc-gataccgagttt 13017908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 22488111 - 22488029
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| ||||||||||| ||||||| ||||||| | | ||| ||||||||||||||||||||||||||| |||||    
T  22488111 ctggctttaaacggggcccccgcaaatgggcggtgggattgatcccctcaaattagtcggtccttggatcggataccaagttt 22488029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 361 - 431
Target Start/End: Original strand, 40252296 - 40252366
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattc 431  Q
    |||| |||||||| ||||| |||||||||| ||||||||||||||| |||||||||| ||||||| |||||    
T  40252296 catttggggttggtctagtagttgacttggaatcttggagtgtgcttctctcaaggtctcaagttcgattc 40252366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 368 - 472
Target Start/End: Complemental strand, 22625262 - 22625157
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccataca 466  Q
    ||||||||||||||||| |||||||||||||||| | ||||||   |||| ||| ||| |||||||| ||| ||||||||||| || | || ||||||||    
T  22625262 ggttggcctagtggttggcttgggatcttggagtttactcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccataca 22625163  T
Q  467 gagctt 472  Q
    ||||||    
T  22625162 gagctt 22625157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 563
Target Start/End: Original strand, 52494623 - 52494684
Alignment:
Q  502 gcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||| ||||||||| | ||||||||||||| | |||||||||||||||||||||    
T  52494623 gcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttt 52494684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 361 - 449
Target Start/End: Original strand, 1985834 - 1985922
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcg 449  Q
    |||| ||| ||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| |||||| |||||||    
T  1985834 catttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgcgaatttcg 1985922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 366 - 434
Target Start/End: Original strand, 31334547 - 31334615
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccct 434  Q
    |||||| ||||||||||||| ||||||| |||||||||||| |||| ||||| ||||||| ||||||||    
T  31334547 ggggttcgcctagtggttgatttgggatattggagtgtgcttctcttaaggtctcaagttcgattccct 31334615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 35674940 - 35674828
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||||| |||||||| |||||||||||||||| ||||| ||  |||||  || ||| |||||||| ||| ||||||||||| || | || |    
T  35674940 catttggggttggccaagtggttggcttgggatcttggagtttgctcttccaaaggtcacaggttcgattccctctggagccaatttcggtgggctaagt 35674841  T
Q  460 ccatacagagctt 472  Q
    |||||||||||||    
T  35674840 ccatacagagctt 35674828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 355 - 563
Target Start/End: Complemental strand, 36131715 - 36131511
Alignment:
Q  355 ttaactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    ||||| |||| ||||||||| ||||||||  |||||||| |||||||  | |||||   | || ||| ||| |||||||||||||||||||||||| ||     
T  36131715 ttaacccatttggggttggcatagtggtttgcttgggattttggagttcgttcctccagatgtctcaggttcgattccctatggtgccaatttcggtggc 36131616  T
Q  455 c-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
    | || |||||||||||| ||||| || ||   ||| |||| | |||||| |||||||||| ||||||||| | |||| |||||||| |  || |||| ||    
T  36131615 ctaagtccatacagagc-ttgctatgact---tta-aacgggacccccgtaagtgggcggtgggattggtcccctcggattagtcgattattagatcaga 36131521  T
Q  554 taccgagttt 563  Q
    ||||||||||    
T  36131520 taccgagttt 36131511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 367 - 559
Target Start/End: Original strand, 35229172 - 35229360
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatac 465  Q
    |||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||| | |  |||||||||||| || | || |||||||    
T  35229172 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttct-atgccaatttcggtgggctaagtccatac 35229270  T
Q  466 agagctttgctttggctggcttagaacgag-gcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    | ||| |||||    ||| |||  |||| |  ||||| |||||| |||| ||||||||| | ||||||||||||| | |||||||||||||||||    
T  35229271 atagc-ttgct----ctgactttaaacgggtccccccacaagtgagcggtgggattggtcccctcgaattagtcgattcttggatcggataccga 35229360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 450
Target Start/End: Original strand, 2351020 - 2351100
Alignment:
Q  370 ttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    ||||||||||||||| ||||| |||||| ||| ||||||||   |||| ||| ||| |||||||| |||||||||||||||    
T  2351020 ttggcctagtggttggcttggaatcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcgg 2351100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 563
Target Start/End: Original strand, 28791250 - 28791310
Alignment:
Q  503 caagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||| | ||||||| || ||||||||||||||||||| |||||||| |||||||    
T  28791250 caagtgggcggtgagattggttctttcgaattagtcggtccttgaatcggatatcgagttt 28791310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 427 - 563
Target Start/End: Original strand, 32990499 - 32990631
Alignment:
Q  427 gattccctatggtgccaatttcggcggac-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgc 525  Q
    |||||||| | ||||||||||||| || | || |||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| |    
T  32990499 gattccctttagtgccaatttcggtgggctaagtccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 32990593  T
Q  526 tctcgaattagtcggtccttggatcggataccgagttt 563  Q
     |||| | |||||| | ||||||||| |||| ||||||    
T  32990594 cctcggactagtcgattcttggatcgaatactgagttt 32990631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 374 - 450
Target Start/End: Original strand, 40307553 - 40307628
Alignment:
Q  374 cctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    ||||||| |||  ||||||| ||||||||||||||||||||||| |||  ||||||| ||| |||||||||||||||    
T  40307553 cctagtgtttggtttgggattttggagtgtgctcctctcaaggtctcatatttgatt-cctttggtgccaatttcgg 40307628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 496 - 559
Target Start/End: Complemental strand, 43719155 - 43719092
Alignment:
Q  496 gcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||| |||||||||| |||||||||  ||||| |||||||| | |||||||||||||||||    
T  43719155 gcccccgaaagtgggcggtgggattggtcatctcggattagtcgattcttggatcggataccga 43719092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 386 - 447
Target Start/End: Original strand, 4249207 - 4249269
Alignment:
Q  386 cttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    |||||||| |||||||||||||||| ||||||| ||| ||||||||| || ||||||||||||    
T  4249207 cttgggattttggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaattt 4249269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 369 - 415
Target Start/End: Original strand, 10125788 - 10125834
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaag 415  Q
    ||||||||||||||||||||||||||||||||| || || |||||||    
T  10125788 gttggcctagtggttgacttgggatcttggagtttgttcgtctcaag 10125834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 368 - 450
Target Start/End: Original strand, 13550213 - 13550295
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||  |||| ||| |  | ||||||| | |||||||||||||    
T  13550213 ggttggcctagtggttgacttgagatctgggagtttgctcctctagaggtctcaggcctaattccctctagtgccaatttcgg 13550295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 361 - 559
Target Start/End: Complemental strand, 13771682 - 13771487
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||| ||  |||||| |||||||||||| ||| ||||| ||||||||| |||| || |||||||| || || |||| |||| || | || |    
T  13771682 catttggggttggtctgatggttggcttgggatcttgaagtttgctcatctcaaggtctcaaattcgattccctctgatgtcaatctcggtgggctaagt 13771583  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||  |||| ||||    |||||||  |||| ||| |||||||||||  |  | ||||||| | ||  ||||||||||| |||||||||||||||||    
T  13771582 ccatacgaagctatgct----ctggctttaaacggggctcccgcaagtggatgatgagattggtcccctataattagtcggttcttggatcggataccga 13771487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 501 - 563
Target Start/End: Original strand, 23639758 - 23639820
Alignment:
Q  501 cgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||| ||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  23639758 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 23639820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 501 - 563
Target Start/End: Original strand, 23645416 - 23645478
Alignment:
Q  501 cgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||| ||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  23645416 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 23645478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 367 - 513
Target Start/End: Original strand, 33992630 - 33992772
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatac 465  Q
    |||||| |||||||||||  ||||||||||||||| ||||||||   |||| | | ||| ||||| || ||||||||||||||| || | || |||||||    
T  33992630 gggttgacctagtggttggtttgggatcttggagtttgctcctccagaggtcttaggttcgattctctctggtgccaatttcggtgggctaagtccatac 33992729  T
Q  466 agagctttgctttggctggcttagaacgaggcccccgcaagtgggcgg 513  Q
    | ||| |||||    |||||||  |||| |||||||||||||||||||    
T  33992730 atagc-ttgct----ctggctttaaacggggcccccgcaagtgggcgg 33992772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 386 - 447
Target Start/End: Original strand, 38869798 - 38869860
Alignment:
Q  386 cttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    |||||||||| |||||||||||||| ||||||| ||| ||| |||||||| ||||||||||||    
T  38869798 cttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaattt 38869860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 12500231 - 12500170
Alignment:
Q  387 ttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttc 448  Q
    ||||||||||||||| |||||||   ||||| ||| |||||||||||| |||||||||||||    
T  12500231 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttc 12500170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 13584446 - 13584365
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcg 449  Q
    ||||||||||||||||| | || ||| ||||||| ||||||||  || || ||||||| |||||||| ||||| ||||||||    
T  13584446 ggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccctctggtgtcaatttcg 13584365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 19238211 - 19238276
Alignment:
Q  293 tttttggacaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaattaa 358  Q
    ||||||||||| ||| ||  ||||||||||||| || |||||||| ||||| ||||||||||||||    
T  19238211 tttttggacaaattatataaataatactataaattaaaaacaaacatatatctaatataaaattaa 19238276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 25434724 - 25434659
Alignment:
Q  367 gggttggcctagtggt-tgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattc 431  Q
    |||||||||| ||||| || ||||||| ||||||||||||| |||||||||| ||| |||||||||    
T  25434724 gggttggcctggtggtgtggcttgggaccttggagtgtgcttctctcaaggtctcaggtttgattc 25434659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 449
Target Start/End: Complemental strand, 42508574 - 42508493
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcg 449  Q
    ||||| |||| |||||||||||||||||||  || |||||| ||||| || | |||||||||| | | ||||||||||||||    
T  42508574 ggttgacctaatggttgacttgggatcttgatgtttgctcccctcaaagtctaaagtttgatttcttttggtgccaatttcg 42508493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 503 - 563
Target Start/End: Complemental strand, 23131497 - 23131437
Alignment:
Q  503 caagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||  |||||||| | ||||||||||||| | ||| |||||||||||||||||    
T  23131497 caagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagttt 23131437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 366 - 410
Target Start/End: Original strand, 34722173 - 34722217
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||    
T  34722173 ggggttggcttagtggttggcttgggatcttggagtttgctcctc 34722217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 367 - 447
Target Start/End: Complemental strand, 37109418 - 37109335
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||||||||||||||  || ||||||| || |||||||||||||| ||||||| ||| ||| ||||| || ||||||||||||    
T  37109418 gggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 37109335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 38206171 - 38206127
Alignment:
Q  386 cttgggatcttggagtgtgctcctctcaaggtttcaagtttgatt 430  Q
    ||||||| |||||||||||||||||||||||| ||| ||||||||    
T  38206171 cttgggaccttggagtgtgctcctctcaaggtctcaggtttgatt 38206127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 54857468 - 54857392
Alignment:
Q  282 tatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaattaa 358  Q
    |||||||| | ||||| ||||| |||| |  ||||||||||||| || |||||||| ||||| ||||||||||||||    
T  54857468 tatttgataacttttttgacaaattacgtaaataatactataaattataaacaaacatatatctaatataaaattaa 54857392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 370 - 410
Target Start/End: Complemental strand, 55961932 - 55961892
Alignment:
Q  370 ttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  55961932 ttggcctagtggttggcttgggatcttggagtttgctcctc 55961892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 367 - 431
Target Start/End: Original strand, 29195104 - 29195170
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattc 431  Q
    |||||||||| |||||  || ||||||| ||||||||||||||||||||||||  |||||| |||||    
T  29195104 gggttggcctggtggtgttggcttgggaccttggagtgtgctcctctcaaggtcgcaagttcgattc 29195170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 472
Target Start/End: Original strand, 32942373 - 32942480
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccata 464  Q
    |||||||| |||||||||| |||| ||||||||||| | ||||||   |||||| | ||| ||||| || || |||||||||||| || | || ||||||    
T  32942373 ggggttggtctagtggttggcttgagatcttggagtttactcctccagaggtttaaggttcgattctctctgatgccaatttcggtgggctaagtccata 32942472  T
Q  465 cagagctt 472  Q
    ||||||||    
T  32942473 cagagctt 32942480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 37980214 - 37980148
Alignment:
Q  367 gggttggcctagtg--gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattc 431  Q
    |||||||||| |||  |||| ||||||| |||||||||||||||||||||||| ||| ||| |||||    
T  37980214 gggttggcctggtgatgttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattc 37980148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 470
Target Start/End: Complemental strand, 43719265 - 43719154
Alignment:
Q  360 tcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aac 458  Q
    ||||| |||||||| ||||||||||  ||| ||||||||||| ||||||||   |||||||| ||| ||||| || | |||| |||||||| || | ||     
T  43719265 tcatttggggttggtctagtggttggtttgagatcttggagtttgctcctccagaggtttcaggttcgattctctctagtgctaatttcggtgggctaag 43719166  T
Q  459 tccatacagagc 470  Q
    ||||||||||||    
T  43719165 tccatacagagc 43719154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 444
Target Start/End: Original strand, 56409976 - 56410039
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaa 444  Q
    |||| ||||||| |||||||||||||||||||||||| ||| ||| ||||| |  |||||||||    
T  56409976 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctccctggtgccaa 56410039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 497 - 563
Target Start/End: Complemental strand, 9978576 - 9978510
Alignment:
Q  497 cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||||||| ||||||||| |  ||| |||||| | | ||| |||||||||||||||||    
T  9978576 cccccgcaagtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagttt 9978510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 17415688 - 17415722
Alignment:
Q  370 ttggcctagtggttgacttgggatcttggagtgtg 404  Q
    |||| ||||||||||||||||||||||||||||||    
T  17415688 ttggtctagtggttgacttgggatcttggagtgtg 17415722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 401 - 479
Target Start/End: Original strand, 38740888 - 38740966
Alignment:
Q  401 tgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttg 479  Q
    ||||||||||| ||||| ||| ||| |||||||| ||||| ||||||||| |||||  || |||||||  |||||||||    
T  38740888 tgtgctcctcttaaggtctcaggttcgattccctctggtgtcaatttcggtggacaggtctatacagaattttgctttg 38740966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 340
Target Start/End: Complemental strand, 49600533 - 49600380
Alignment:
Q  186 cataatagtcaatcccggataatggtgtgtagcggttgaccctaaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatt 285  Q
    |||| ||||||||| ||||||  ||||||||| |   ||||  ||||||||||||| ||| |||| ||||| ||||||| |||||  |  ||  |||||     
T  49600533 catagtagtcaatctcggatagcggtgtgtagagtccgacctcaaaagtgggatagcaggttagcgtatagtggtatgacaaatagtggtcaccgatatc 49600434  T
Q  286 tgattattttttggacaagttacatgtataatactataaagtacaaacaaactta 340  Q
    ||||||||||||| |||| ||||||  |||||  |||| |||| |||||||||||    
T  49600433 tgattattttttgaacaaattacat-aataatgttatagagtataaacaaactta 49600380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 49600709 - 49600643
Alignment:
Q  292 ttttttggacaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaattaa 358  Q
    |||||| ||||| |||| |  ||||||||||||| || |||||||| ||||| ||||||||||||||    
T  49600709 tttttttgacaaattacgtaaataatactataaattataaacaaacatatatctaatataaaattaa 49600643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 377 - 450
Target Start/End: Original strand, 49287872 - 49287945
Alignment:
Q  377 agtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    ||||||||  ||||||||||||||| ||||||||   |||| ||| ||| ||||| || |||||||||||||||    
T  49287872 agtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcgg 49287945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 1e-37; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 356 - 563
Target Start/End: Original strand, 4718642 - 4718845
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctca-aggtttcaagtttgattccctatggtgccaatttcggcgga 454  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||| ||||||| ||| |||| ||| ||| |||||||| ||||||||||||||| ||     
T  4718642 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcct-tcagaggtctcaggttcgattccctctggtgccaatttcggtggg 4718740  T
Q  455 c-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgga 553  Q
    | || |||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||    
T  4718741 ctaagtccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgga 4718835  T
Q  554 taccgagttt 563  Q
    ||||||||||    
T  4718836 taccgagttt 4718845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 3734822 - 3734624
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||  ||||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  3734822 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 3734723  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||| ||||| | ||||||||| | |||| |||||||| | |||||||||||||||||    
T  3734722 ccatacagagctt-gct----ctggctttaaacggggcccccgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcggataccga 3734628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 34237854 - 34237656
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  34237854 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 34237755  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| |||||||||||||| |||| ||||||||| | |||| |||||||| | |||||||||||||||||    
T  34237754 ccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccga 34237660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 379 - 563
Target Start/End: Original strand, 18128533 - 18128713
Alignment:
Q  379 tggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgcttt 478  Q
    ||||||||||||||||||| ||||||||||| ||||||| | |  || ||||| || ||||||||||||||| || | | |||||| |||||||||||      
T  18128533 tggttgacttgggatcttgaagtgtgctcctttcaaggtcttagattcgattctctctggtgccaatttcggtgggcgaatccataaagagctttgct-- 18128630  T
Q  479 ggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
      |||||||  |||| ||||||||||||||||||| ||||||||| |||||  |||||||||| ||||||||| |||||||||||    
T  18128631 --ctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccgagttt 18128713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 356 - 563
Target Start/End: Original strand, 20305905 - 20306108
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| ||||||||||||||||||| ||||||||||| |||| ||||||||  ||||| |||  || |||||| | ||||||||||||||  || |    
T  20305905 taacccatttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggc 20306004  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || |||||||||||||| |||    |||||||  |||| | ||||||||||||||||| ||||||||| | ||||||||||||| ||||||||||||||    
T  20306005 taagtccatacagagctt-gct----ctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggat 20306099  T
Q  555 accgagttt 563  Q
    |||||||||    
T  20306100 accgagttt 20306108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 356 - 563
Target Start/End: Original strand, 21092538 - 21092741
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| ||||||||||||||||||| ||||||||||| |||| ||||||||  ||||| |||  || |||||| | ||||||||||||||  || |    
T  21092538 taacccatttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggc 21092637  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || |||||||||||||| |||    |||||||  |||| | ||||||||||||||||| ||||||||| | ||||||||||||| ||||||||||||||    
T  21092638 taagtccatacagagctt-gct----ctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggat 21092732  T
Q  555 accgagttt 563  Q
    |||||||||    
T  21092733 accgagttt 21092741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 370 - 563
Target Start/End: Original strand, 21603241 - 21603430
Alignment:
Q  370 ttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacaga 468  Q
    ||||||||||||||| ||||||||||| |||| ||||||||   |||| ||| ||| |||||||||||||||||||||||| || | ||  |||||||||    
T  21603241 ttggcctagtggttggcttgggatcttagagtttgctcctccagaggtctcaggttcgattccctatggtgccaatttcggtgggctaagcccatacaga 21603340  T
Q  469 gctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  21603341 gctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 21603430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 19471611 - 19471810
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcg-gacaact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| |||||||||||| |||||||||||| || | |  || |    
T  19471611 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagt 19471710  T
Q  460 ccatacagagctttgctttggctggcttagaacgagg-cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccg 558  Q
    ||||||||||| |||||    |||||||  |||| || ||||||||||||||||  ||||||||| | ||||||||||||| | ||||||||||||||||    
T  19471711 ccatacagagc-ttgct----ctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccg 19471805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 19542535 - 19542734
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcg-gacaact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| |||||||||||| |||||||||||| || | |  || |    
T  19542535 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagt 19542634  T
Q  460 ccatacagagctttgctttggctggcttagaacgagg-cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccg 558  Q
    ||||||||||| |||||    |||||||  |||| || ||||||||||||||||  ||||||||| | ||||||||||||| | ||||||||||||||||    
T  19542635 ccatacagagc-ttgct----ctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccg 19542729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 19590161 - 19589962
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcg-gacaact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| |||||||||||| |||||||||||| || | |  || |    
T  19590161 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagt 19590062  T
Q  460 ccatacagagctttgctttggctggcttagaacgagg-cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccg 558  Q
    ||||||||||| |||||    |||||||  |||| || ||||||||||||||||  ||||||||| | ||||||||||||| | ||||||||||||||||    
T  19590061 ccatacagagc-ttgct----ctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccg 19589967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 39349258 - 39349456
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||||| |||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  39349258 catttggggttggcccagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 39349357  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||| | | |||| |||||||| | ||||||||||||||| |    
T  39349358 ccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccaa 39349452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 366 - 563
Target Start/End: Original strand, 28193481 - 28193674
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg-cggacaactccata 464  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| |||||||||||||||  ||  || ||||||    
T  28193481 ggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccata 28193580  T
Q  465 cagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||| |||||    |||||||  |||| ||||||  ||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  28193581 cagagc-ttgct----ctggctttaaacggggcccctacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 34639405 - 34639209
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| |||||| | |||||||||| |||||||||||||||||||||||||||||||| ||| | | || ||||| ||||||||||||||| ||  || ||    
T  34639405 catttggggttagtctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggctcga-tccctctggtgccaatttcggtgggtaagtc 34639307  T
Q  461 catacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgag 560  Q
    ||||||||||||||||    ||||||||||||| |||| | |||||||| |||  |||||||| |  |||||||| |||||||||| || ||||||| ||    
T  34639306 catacagagctttgct----ctggcttagaacg-ggcctctgcaagtggacggtaggattggtcccttcgaattaatcggtccttgaattggataccaag 34639212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 41070768 - 41070884
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatac 465  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||| ||||| ||||||||| || ||| | |||||    
T  41070768 ggggttggcctagtggttgacttgggatcttggagtgtgctactctcaaggtctcaagttcgattccctttggtgtcaatttcggtgggcaagttcatac 41070867  T
Q  466 agagctttgctttggct 482  Q
    | |||||| || |||||    
T  41070868 atagctttactctggct 41070884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 356 - 563
Target Start/End: Complemental strand, 42643322 - 42643119
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac 455  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| ||||||||   |||| |||  || |||||||| | ||||||||||||| || |    
T  42643322 taacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcagattcgattccctctagtgccaatttcggtgggc 42643223  T
Q  456 -aactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || |||||||||||| |||||    ||| |||  |||| || |||||||||||||||| ||||||||| | |||| |||||| | | ||||||||||||    
T  42643222 taagtccatacagagc-ttgct----ctgtcttgaaacgggggccccgcaagtgggcggtgggattggtcccctcgcattagttgattcttggatcggat 42643128  T
Q  555 accgagttt 563  Q
    |||||||||    
T  42643127 accgagttt 42643119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 34694775 - 34694576
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| |||||||| ||||||||||||||| ||||||||||| ||||||||||||||| | | ||| |||||| | ||||||||||||||| || ||| |     
T  34694775 catttggggttggtctagtggttgacttgtgatcttggagtttgctcctctcaaggtcttaggttcgattccatctggtgccaatttcggtgggcaaatt 34694676  T
Q  461 catacagagctttgctttggctggcttagaac-gaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    |||||| |||||||||    | |||||||||| ||  ||||| | ||||| ||| ||||||||| | |||  ||||||| |||||||||||||||| |||    
T  34694675 catacaaagctttgct----ccggcttagaacggaatccccctctagtggacggtgggattggtcccctcagattagtctgtccttggatcggataacga 34694580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 42328007 - 42328204
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| | ||||||   |||| ||| |||||||||||| || |||||||||||| || | || |    
T  42328007 catttggggttggcctagtggttggcttgggatcttggagttt-ctcctccagaggtgtcaggtttgattccctctgttgccaatttcggtgggctaagt 42328105  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||| ||||||| ||  ||||||||| | ||||||||||||| | |||||||||||||||||    
T  42328106 ccatacagagctt-gct----ctggctttaaacggggcccccacaagtggacgatgggattggtcccctcgaattagtcgattcttggatcggataccga 42328200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 2618188 - 2618386
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| |   ||| |||||||| ||||||||||||| | || | || |    
T  2618188 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcttgggttcgattccctctggtgccaatttcagtgggctaagt 2618287  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  ||||  |||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||| ||||    
T  2618288 ccatacagagctt-gct----ctggctttaaacggagcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggattccga 2618382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 15259605 - 15259407
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||| ||||||||||  ||||||||||||| | ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  15259605 catttggggttggtctagtggttggtttgggatcttggattttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 15259506  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| ||||||||||||||||||| |  |||||| | ||||||||||||| | |||||||||||| ||||    
T  15259505 ccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgtaattggtcccctcgaattagtcgattcttggatcggatgccga 15259411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 380 - 557
Target Start/End: Original strand, 13749077 - 13749250
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttg 479  Q
    |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| |||  ||||||||||| || || ||| | |||||| |||||||||       
T  13749077 ggttgacttgggat-ttggagtctgctcctctcaaggtttcaggttcgatttccttcggtgccaattttggtgggcaagttcatacaaagctttgct--- 13749172  T
Q  480 gctggcttagaacgagg-cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggatacc 557  Q
     ||||||||||||| || ||||||||||||||| | || |||||| | |||| ||||||| ||||||||||| ||||||    
T  13749173 -ctggcttagaacggggccccccgcaagtgggcagtggaattggtcccctcggattagtcagtccttggatcagatacc 13749250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 32879281 - 32879479
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||| |||||||||||||||||||||| |||| || |||||   |||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  32879281 catttggggttggtctagtggttgacttgggatcttcgagtttggtcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 32879380  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
     |||||||||| |||||    ||| | |  |||| ||||||| ||||||||||| ||||||||| | |||| |||||||| | ||||||| |||||||||    
T  32879381 tcatacagagc-ttgct----ctgacattaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggattggataccga 32879475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 26169041 - 26168936
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccataca 466  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||| ||| ||||||||||   || |||||||||||| || ||| | ||||||    
T  26169041 gggttggcctagtggtttgcttgggatcttggagtttgctcctctcaaggtctcaggtttgattcctcctgatgccaatttcggtgggcaagttcataca 26168942  T
Q  467 gagctt 472  Q
    ||||||    
T  26168941 gagctt 26168936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 27746534 - 27746422
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||||||||||||||  ||||||||||||||| ||||||||  ||||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  27746534 catttggggttggcctagtggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagt 27746435  T
Q  460 ccatacagagctt 472  Q
    |||||||||||||    
T  27746434 ccatacagagctt 27746422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 28964035 - 28964232
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| |||||||| ||||||||||  ||| |||||| |||| ||||||||| ||||||||| ||| |||||| | ||||||||||||||| || | || |    
T  28964035 catttggggttggtctagtggttggtttgagatcttagagtttgctcctcttaaggtttcatgttcgattccatctggtgccaatttcggtgggctaagt 28964134  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    |||||| ||     ||| || |||||||  |||| ||||||||||||||||| | ||||||||| | ||||||||||||| | ||| ||||| |||| ||    
T  28964135 ccatacgga-----gctatgtctggctttaaacggggcccccgcaagtgggc-gtgggattggtcccctcgaattagtcgattcttagatcgaatactga 28964228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 368 - 563
Target Start/End: Complemental strand, 22200751 - 22200561
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacag 467  Q
    ||||||||| |||||||  ||||||||||||||| | || ||||||| || ||| ||| |||||||| | ||||||||||||  ||| || | |||||||    
T  22200751 ggttggcct-gtggttggtttgggatcttggagtttacttctctcaaagtctcaggttcgattccctctagtgccaatttcgagggaaaagttcatacag 22200653  T
Q  468 agctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||    |||||||||||||  ||||| |||||| | | |  |||||||| | ||||||||| ||||||||| ||||||| ||| |||||    
T  22200652 agctttgct----ctggcttagaacggagcccctgcaagtagacagtaggattggtaccctcgaattaatcggtccttagatcggacaccaagttt 22200561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 369 - 482
Target Start/End: Original strand, 21239359 - 21239472
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacaga 468  Q
    |||||| ||||||||| |||| |||||||||||||| |||| ||||||||||||||||||||  |  ||||||||||||||| || ||  |||||| | |    
T  21239359 gttggcttagtggttggcttgcgatcttggagtgtgttcctttcaaggtttcaagtttgattttccctggtgccaatttcggtgggcatgtccatataaa 21239458  T
Q  469 gctttgctttggct 482  Q
     |||||||||||||    
T  21239459 actttgctttggct 21239472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 244 - 336
Target Start/End: Original strand, 27707900 - 27707993
Alignment:
Q  244 ggatagcatatagcggtatgataaataacgaccattgatattt-gattattttttggacaagttacatgtataatactataaagtacaaacaaa 336  Q
    ||||||| ||||||||||||| ||||| ||  || |||||||| ||||||||||||||||| ||||||| |||||||||||||||| |||||||    
T  27707900 ggatagcgtatagcggtatgacaaatagcggtcactgatattttgattattttttggacaaattacatgaataatactataaagtataaacaaa 27707993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 469
Target Start/End: Complemental strand, 8387643 - 8387535
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactc 460  Q
    |||| ||||||||||||||||||| |||| |||||| |||| |||| |||||| ||| ||||||| |||| ||| |||||||||||| || || ||| ||    
T  8387643 catttggggttggcctagtggttgtcttgagatcttagagtttgcttctctcagggtctcaagttcgatttcctctggtgccaattttggtgggcaagtc 8387544  T
Q  461 catacagag 469  Q
    |||||||||    
T  8387543 catacagag 8387535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 5124606 - 5124539
Alignment:
Q  291 attttttggacaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaattaa 358  Q
    ||||||||||||| ||||||| |||||||||||||||| |||||||| |||||||| |||||||||||    
T  5124606 attttttggacaaattacatgaataatactataaagtataaacaaacatatatttagtataaaattaa 5124539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 2639494 - 2639412
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  2639494 ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 2639412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 33747000 - 33747082
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||| ||||||||  |||||||||||||| ||| || |||||| |||||| |||||||| |||||||||||||||||||||||    
T  33747000 ctggtttagaacggagcccccgcaagtggacggtggaattggttctctcggattagtcgatccttggatcggataccgagttt 33747082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 368 - 473
Target Start/End: Original strand, 3794800 - 3794905
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacag 467  Q
    ||||| |||| |||||| ||| |||||||| ||| ||||||||||||||| ||| ||| | |||||| |||||||||||||||||| ||| | ||||||     
T  3794800 ggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcgggcaagttcatacaa 3794899  T
Q  468 agcttt 473  Q
    ||||||    
T  3794900 agcttt 3794905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 386 - 563
Target Start/End: Complemental strand, 8765700 - 8765527
Alignment:
Q  386 cttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgctttggctgg 484  Q
    |||| ||||||||||| |||||| |   || | ||| ||| |||||||| ||||||||||||||  || | || |||||||||||||| |||    ||||    
T  8765700 cttgagatcttggagtttgctcccccagagatctcaggttcgattccctctggtgccaatttcgatgggctaagtccatacagagctt-gct----ctgg 8765606  T
Q  485 cttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||  |||| ||| ||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||||||||||||    
T  8765605 ctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 8765527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 368 - 433
Target Start/End: Original strand, 15974915 - 15974979
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccc 433  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  15974915 ggttggcctagtggtt-acttgggatcttggagtatgctcctctcaaggtctcaagttcgattccc 15974979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 563
Target Start/End: Original strand, 14632975 - 14633154
Alignment:
Q  380 ggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgcttt 478  Q
    ||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || || ||||||||| |||||      
T  14632975 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtctatacagagc-ttgct-- 14633071  T
Q  479 ggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
      ||||||| |||||  ||  || ||||||||||| ||||||||| | || | |||||||| | ||||||||||||||| |||||    
T  14633072 --ctggctttgaacggagcgtccacaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccaagttt 14633154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 280 - 343
Target Start/End: Complemental strand, 25029711 - 25029648
Alignment:
Q  280 gatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatat 343  Q
    |||||||||||| ||||||||||| ||||||| ||| |||||||||||| ||||||||||||||    
T  25029711 gatatttgattaatttttggacaaattacatgaatattactataaagtataaacaaacttatat 25029648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 360 - 552
Target Start/End: Original strand, 28908822 - 28909012
Alignment:
Q  360 tcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaag--gtttcaagtttgattccctatggtgccaatttcggcggacaa 457  Q
    ||||| || ||||| ||||||||||  |||| || ||||||| |||||||||||||  |||||| |||  ||||||| ||||| ||||| | | || |||    
T  28908822 tcatttggagttggtctagtggttggtttggaattttggagtttgctcctctcaaggtgtttcaggttcaattccctctggtgtcaattacagtgggcaa 28908921  T
Q  458 ctccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcgg 552  Q
     |||||||||||||||| |    |||||||  |||| ||| ||||||||||||||  | ||||| | | |||  |||||||||||||||||||||    
T  28908922 gtccatacagagctttgtt----ctggctttaaacggggctcccgcaagtgggcgatgtgattgatcccctcagattagtcggtccttggatcgg 28909012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 366 - 440
Target Start/End: Complemental strand, 30911451 - 30911377
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtg 440  Q
    |||||||||||| || |||| ||| ||||||||||| ||||||||||||||||||| ||||||||  ||||||||    
T  30911451 ggggttggcctaatgattgatttgagatcttggagtttgctcctctcaaggtttcatgtttgattttctatggtg 30911377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 563
Target Start/End: Original strand, 12312863 - 12313045
Alignment:
Q  376 tagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgc 475  Q
    |||| ||||| ||||||||||||||| ||||| ||||||  | ||||||| |||| ||| |||||||||||| |  || |||  ||| ||| |||||||     
T  12312863 tagtagttgatttgggatcttggagtttgctcttctcaaaatctcaagttcgatttcctctggtgccaattttgatgggcaaggccacacaaagctttga 12312962  T
Q  476 tttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||   ||| || | ||||||| ||||||||||| ||||||| | | ||||||||||||||| ||| || |||| |||||||||    
T  12312963 tttggct---tta-aatg-ggcccccacaagtgggcggtgggattgatcccctcgaattagtcggttcttagagcggaaaccgagttt 12313045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 36848948 - 36848859
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| ||||||||| |||||||||||||||| | ||||||| ||||||||||||||||| |  ||  ||| ||| |||||||||||||||    
T  36848948 catttggggttggcatagtggttgacttgggtttttggagtttgctcctctcaaggttttagattccatttcctctggtgccaatttcgg 36848859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 368 - 480
Target Start/End: Complemental strand, 33585819 - 33585707
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacag 467  Q
    |||||||||||||||||  ||| |||||| ||||||||||||||||| |||||| ||| |||| ||| |  ||  ||||||||  | ||| |||||| ||    
T  33585819 ggttggcctagtggttggtttgagatcttagagtgtgctcctctcaaagtttcaggttcgatttcctcttatgttaatttcggtaggcaagtccatatag 33585720  T
Q  468 agctttgctttgg 480  Q
    |||||||||||||    
T  33585719 agctttgctttgg 33585707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 408 - 563
Target Start/End: Complemental strand, 6953159 - 6953009
Alignment:
Q  408 ctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgctttggctggcttagaacgaggcccccgcaag 506  Q
    |||| ||||| ||| ||| |||||||| ||||||||||||||| || | || |||||||||||||| |||    |||||||  |||  ||||||||||||    
T  6953159 ctctaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gct----ctggctttaaacagggcccccgcaag 6953065  T
Q  507 tgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    | ||||| ||||||||| | |||| |||||||| | ||||||||| |||||||||||    
T  6953064 ttggcggtgggattggtcc-ctcggattagtcgattcttggatcgaataccgagttt 6953009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 369 - 559
Target Start/End: Complemental strand, 264590 - 264405
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacag 467  Q
    |||||||||||||||| ||||||||||| |||| ||||||||   || | ||| ||| |||||||| | ||||||||||||| || | || || |||||     
T  264590 gttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacat 264491  T
Q  468 agctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||| |||||    |||||||  |||| ||||||| ||| ||||||| | ||||| | | ||||||||||||| | |||||||||||||||||    
T  264490 agc-ttgct----ctggctttaaacg-ggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccga 264405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 369 - 559
Target Start/End: Original strand, 651331 - 651516
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacag 467  Q
    |||||||||||||||| ||||||||||| |||| ||||||||   || | ||| ||| |||||||| | ||||||||||||| || | || || |||||     
T  651331 gttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacat 651430  T
Q  468 agctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||| |||||    |||||||  |||| ||||||| ||| ||||||| | ||||| | | ||||||||||||| | |||||||||||||||||    
T  651431 agc-ttgct----ctggctttaaacg-ggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccga 651516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 369 - 559
Target Start/End: Original strand, 837066 - 837251
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacag 467  Q
    |||||||||||||||| ||||||||||| |||| ||||||||   || | ||| ||| |||||||| | ||||||||||||| || | || || |||||     
T  837066 gttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacat 837165  T
Q  468 agctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||| |||||    |||||||  |||| ||||||| ||| ||||||| | ||||| | | ||||||||||||| | |||||||||||||||||    
T  837166 agc-ttgct----ctggctttaaacg-ggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccga 837251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 368 - 482
Target Start/End: Complemental strand, 3403694 - 3403580
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacag 467  Q
    ||||||||| | ||||| | || ||||||||||| ||||| ||||||||| | | ||| |||||| | ||||||||||||||| || ||| ||||||||     
T  3403694 ggttggccttggggttggcctgagatcttggagtttgctcatctcaaggtcttatgttcgattccatctggtgccaatttcggtgggcaagtccatacaa 3403595  T
Q  468 agctttgctttggct 482  Q
    | ||||| |||||||    
T  3403594 aactttgttttggct 3403580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 34610770 - 34610688
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||||| ||| |||||||||||||  | |||||| | ||||||||||||| | |||||||||||||||||||||    
T  34610770 ctggctttaaacgagcccctcgcaagtgggcggtagaattggtcccctcgaattagtcgattcttggatcggataccgagttt 34610688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 18532109 - 18532158
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  18532109 catttggggttggcctagtggttggcttgggatcttggagtttgctcctc 18532158  T

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Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 453
Target Start/End: Complemental strand, 11715010 - 11714926
Alignment:
Q  369 gttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcgg 453  Q
    ||||||||||||||||  ||| ||||||||||| |||| |||||||| ||||| ||| |||||||  || |||||||||| ||||    
T  11715010 gttggcctagtggttggtttgagatcttggagtttgcttctctcaagatttcaggttcgattccccctgatgccaatttcagcgg 11714926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 13341703 - 13341643
Alignment:
Q  280 gatatttgattattttttggacaagttacatgtataatact-ataaagtacaaacaaactt 339  Q
    |||||||||||||||||||||||| ||||||| ||||||||  ||||||| ||||||||||    
T  13341703 gatatttgattattttttggacaaattacatgaataatactgttaaagtataaacaaactt 13341643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 496 - 563
Target Start/End: Original strand, 20470050 - 20470116
Alignment:
Q  496 gcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||||||||| ||||||||| | |||| |||||||| |  ||||||||||||||||||||    
T  20470050 gcccccgcaagtgggcggtgggattggttc-ctcggattagtcgatttttggatcggataccgagttt 20470116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 404 - 556
Target Start/End: Original strand, 36094729 - 36094877
Alignment:
Q  404 gctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagctttgctttggctggcttagaacgaggcccccgc 503  Q
    |||||||||||||| ||| ||| |||||||| ||||  |||||||||  ||||| |||||||| |||   |||    ||| |||  ||  ||||||||||    
T  36094729 gctcctctcaaggtctcaggttcgattccctctggtatcaatttcggtagacaagtccatacaaagcaaagct----ctgtctttcaataaggcccccgc 36094824  T
Q  504 aagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggatac 556  Q
    ||||||| |||||  ||||| | |||| ||||||||||| |||||||||||||    
T  36094825 aagtgggaggcggtgttggtcccctcggattagtcggtctttggatcggatac 36094877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 497 - 563
Target Start/End: Complemental strand, 7558018 - 7557952
Alignment:
Q  497 cccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||||||| ||| ||||||||| | ||||||||||||| |  ||| ||||||||||||||||    
T  7558018 cccccgcaagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagttt 7557952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 367 - 430
Target Start/End: Complemental strand, 22269000 - 22268935
Alignment:
Q  367 gggttggcctagtggt--tgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgatt 430  Q
    |||||||||| |||||  || ||||||| |||||||||||||| ||||||||| ||||||||||||    
T  22269000 gggttggcctggtggtgttggcttgggaccttggagtgtgctcttctcaaggtctcaagtttgatt 22268935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 366 - 563
Target Start/End: Original strand, 24018389 - 24018583
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccata 464  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||  ||||| | | ||| |||| ||| |  || ||||||| | || | || ||||||    
T  24018389 ggggttgatctagtggttgacttgggatcttggagtttgctcctccaaaggtctgaggttcgatttcctctaatgtcaatttcagtgggctaagtccata 24018488  T
Q  465 cagagctttgctttggctggcttagaacgaggc-ccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||| |||||    |||||||  |||| | | |||| ||||||||||| | ||||||| | || |||||||||||| |||||| |||||| |||||||    
T  24018489 cagagc-ttgct----ctggctttaaacgggcctccccacaagtgggcggtgagattggtccccttgaattagtcggttcttggaccggatatcgagttt 24018583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 381 - 431
Target Start/End: Complemental strand, 40137013 - 40136963
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattc 431  Q
    |||| ||||||| |||||||||||||||||||||||| ||| |||||||||    
T  40137013 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgattc 40136963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 563
Target Start/End: Complemental strand, 4698916 - 4698724
Alignment:
Q  367 gggttggcctagtggttgacttgggatcttggagtgtgctcctctca-aggtttcaagtttgattccctatggtgccaatttcggcggac-aactccata 464  Q
    ||||||||| || |||||  ||||||||||||||| ||||||| ||| |||| ||| ||| |||||||| ||||| ||||||||| || | || |||||     
T  4698916 gggttggcccagcggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatg 4698818  T
Q  465 cagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
     ||| ||| |||    |||||||  ||||  ||||||||||||| |||| ||||||||| | |||| |||||||| | | ||||| |||||||||||||    
T  4698817 aagaactt-gct----ctggctttaaacggagcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcatggattggataccgagttt 4698724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 472
Target Start/End: Complemental strand, 9047462 - 9047365
Alignment:
Q  376 tagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctt 472  Q
    |||||||||  ||| ||||||||||| ||||||||  ||||||| |||||||||||||| |  ||||||||| || |||| || |||||||| |||||    
T  9047462 tagtggttggtttgagatcttggagtttgctcctccaaaggttttaagtttgattccctctaatgccaattttggtggactaagtccatacaaagctt 9047365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 563
Target Start/End: Original strand, 16990722 - 16990783
Alignment:
Q  502 gcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||| |||| |||| | || | |||||||||||||||||||||||||| |||||    
T  16990722 gcaagtgggcggtgggactggtccccttggattagtcggtccttggatcggataccaagttt 16990783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 470
Target Start/End: Original strand, 34778760 - 34778849
Alignment:
Q  381 gttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagagc 470  Q
    |||| |||| || |||| ||||||||||| ||||||| ||||||||||||  | | |||||||||||||| || | | ||||||||||||    
T  34778760 gttggcttgagaccttgcagtgtgctcctttcaaggtctcaagtttgattttccacggtgccaatttcggtgggctagtccatacagagc 34778849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 366 - 450
Target Start/End: Original strand, 28088293 - 28088377
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    ||||||||| |||||||||||||||||||||||||| || || ||   |||| |||  || |||||||| ||||| |||||||||    
T  28088293 ggggttggcttagtggttgacttgggatcttggagtttgttcatccagaggtctcagattcgattccctttggtgtcaatttcgg 28088377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 433
Target Start/End: Complemental strand, 9126629 - 9126582
Alignment:
Q  386 cttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccc 433  Q
    ||||||| |||||||||||||||||||||||  ||||||| |||||||    
T  9126629 cttgggaccttggagtgtgctcctctcaaggactcaagttcgattccc 9126582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 415
Target Start/End: Original strand, 39317029 - 39317076
Alignment:
Q  368 ggttggcctagtggttgacttgggatcttggagtgtgctcctctcaag 415  Q
    |||||| ||||||||||||||| ||| |||||||||||| ||||||||    
T  39317029 ggttggtctagtggttgacttgagatattggagtgtgcttctctcaag 39317076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 517 - 563
Target Start/End: Complemental strand, 5740430 - 5740384
Alignment:
Q  517 gattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||| | |||| |||||||||||||||||||||| |||||||||    
T  5740430 gattggtcccctcggattagtcggtccttggatcggacaccgagttt 5740384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 10292172 - 10292254
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| ||||||| ||||||||||| ||||||||| |  ||| |||||| | | ||||||||| |||||||||||    
T  10292172 ctggctttaaacggggcccccacaagtgggcggtgggattggtcccttcggattagttgattcttggatcgaataccgagttt 10292254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 7558142 - 7558093
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    |||| |||||||||||||| |||  |||||||||||||||| ||||||||    
T  7558142 catttggggttggcctagtagttagcttgggatcttggagtttgctcctc 7558093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 8042656 - 8042705
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    |||| ||||||| ||||||| ||| |||||||||||||||| ||||||||    
T  8042656 catttggggttgacctagtgcttggcttgggatcttggagtttgctcctc 8042705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 22893072 - 22893137
Alignment:
Q  293 tttttggacaagttacatgtataatactataaagtacaaacaaacttatatttaatataaaattaa 358  Q
    ||||||||||| |||  |  ||||||||||||| || |||||||| ||||| ||||||||||||||    
T  22893072 tttttggacaaattatgtaaataatactataaattataaacaaacatatatctaatataaaattaa 22893137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 97565 - 97367
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aact 459  Q
    |||| ||||||||||||||||||| |||||||||||| ||| ||||||||  ||||| ||| ||| |||||||| ||||||||||||||| || | || |    
T  97565 catttggggttggcctagtggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 97466  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||| |||||    ||| |||  |||| | ||||||||||||||||| ||||||||| |||||| ||||||||||  ||||| ||||||||||    
T  97465 ccatacagagc-ttgct----ctgactttaaacgggacccccgcaagtgggcggtgggattggtcctctcgtattagtcggtttttggaccggataccga 97371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 361 - 563
Target Start/End: Original strand, 40323 - 40520
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctca-aggtttcaagtttgattccctatggtgccaatttcggcggac-aac 458  Q
    |||| ||||||||||||||||||| ||| |||||||||||| ||||||| ||| |||| ||| ||| |||||||| ||||||||||||||| || | ||     
T  40323 catttggggttggcctagtggttggcttaggatcttggagtttgctcct-tcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaag 40421  T
Q  459 tccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccg 558  Q
    |||||||||||||| |||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | ||||||||||||||||    
T  40422 tccatacagagctt-gct----ctggctttaaacggggcccccgcaagtgggcggtgggattggt-ccctcggattagtcgattcttggatcggataccg 40515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 361 - 563
Target Start/End: Complemental strand, 53070 - 52872
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaac-t 459  Q
    |||| ||| ||||||||||||||| |||||||||||||||| ||||||||   ||| |||| ||| |||||||| ||||||||||||||| || |||  |    
T  53070 catttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggcttcaggttcgattccctctggtgccaatttcggtgggcaaaat 52971  T
Q  460 ccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccga 559  Q
    ||||||||||||| |||    |||||||  |||| |||||||||| ||||||||  |||||||| |||||| |||||||| | |||| ||||||||||||    
T  52970 ccatacagagctt-gct----ctggctttaaacggggcccccgcaggtgggcggtaggattggtcctctcggattagtcgattcttgaatcggataccga 52876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 68; Significance: 7e-30; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 360 - 563
Target Start/End: Complemental strand, 1256 - 1058
Alignment:
Q  360 tcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aac 458  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||| ||||||||||| || | ||     
T  1256 tcatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaag 1157  T
Q  459 tccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccg 558  Q
    |||||||||||| |||||    |||||||  || | ||||||||||||||| ||| ||||||||| | ||||||||||||| | ||| ||||||||||||    
T  1156 tccatacagagc-ttgct----ctggctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccg 1063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 68; Significance: 7e-30; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 360 - 563
Target Start/End: Complemental strand, 9499 - 9301
Alignment:
Q  360 tcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aac 458  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||| ||||||||||| || | ||     
T  9499 tcatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaag 9400  T
Q  459 tccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccg 558  Q
    |||||||||||| |||||    |||||||  || | ||||||||||||||| ||| ||||||||| | ||||||||||||| | ||| ||||||||||||    
T  9399 tccatacagagc-ttgct----ctggctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccg 9306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 472
Target Start/End: Complemental strand, 12200 - 12087
Alignment:
Q  360 tcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aac 458  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||| ||| ||| ||||||||||| || | ||     
T  12200 tcatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaag 12101  T
Q  459 tccatacagagctt 472  Q
    ||||||||||||||    
T  12100 tccatacagagctt 12087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 366 - 563
Target Start/End: Complemental strand, 7503 - 7310
Alignment:
Q  366 ggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccata 464  Q
    |||||||||||||| |||| |||||||||||||||| ||||||||   || | ||| ||| ||||||||  |||||||||||||| || | || ||||||    
T  7503 ggggttggcctagtagttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctccggtgccaatttcggtgggctaagtccata 7404  T
Q  465 cagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    ||||||||| ||    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | ||||||||||||||| |||||    
T  7403 cagagcttt-ct----ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttt 7310  T

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Target: scaffold0019 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 386 - 563
Target Start/End: Original strand, 161832 - 162005
Alignment:
Q  386 cttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aactccatacagagctttgctttggctgg 484  Q
    |||||||||||||||| ||||||||   |||| ||| ||| |||||||| ||||||||||||||| || | || |||||||||||||| |||    ||||    
T  161832 cttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gct----ctgg 161926  T
Q  485 cttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||  || | ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||| ||||||||||||    
T  161927 cttttaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttt 162005  T

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Target: scaffold0049 (Bit Score: 55; Significance: 4e-22; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 66868 - 66950
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  66868 ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 66950  T

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Target: scaffold0049; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 447
Target Start/End: Original strand, 66760 - 66846
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    |||| ||| |||| |||||||||| |||||||||||||||| ||||||||  ||||| ||| ||| |||||| | ||||||||||||    
T  66760 catttgggattggtctagtggttggcttgggatcttggagtttgctcctccaaaggtctcacgttcgattccttctggtgccaattt 66846  T

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Target: scaffold0252 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 244 - 332
Target Start/End: Original strand, 16593 - 16681
Alignment:
Q  244 ggatagcatatagcggtatgataaataacgaccattgatatttgattattttttggacaagttacatgtataatactataaagtacaaa 332  Q
    ||||||| ||||| ||||||| ||||| ||  || ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  16593 ggatagcgtatagaggtatgacaaatagcggtcactgatatttgattattttttggacaaattacatgaataatactataaagtacaaa 16681  T

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Target: scaffold0160 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 370 - 563
Target Start/End: Complemental strand, 29332 - 29144
Alignment:
Q  370 ttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggacaactccatacagag 469  Q
    ||||||||||||||| ||||| |||||| |||||| |||||||||||| | | ||| |||||||  || ||||| ||||||  |  || |||||||||||    
T  29332 ttggcctagtggttggcttggaatcttgaagtgtgttcctctcaaggtcttaggttcgattcccgctgatgccattttcggtcggtaagtccatacagag 29233  T
Q  470 ctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||    |||||||| || | | ||||||||| ||| | | ||||||||| | |||  ||||||| ||||||||||||||||||||||||    
T  29232 ctttgct----ctggcttaaaatg-gacccccgcaaatggacagtgggattggtcccctcagattagtcagtccttggatcggataccgagttt 29144  T

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Target: scaffold0459 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 360 - 563
Target Start/End: Complemental strand, 10893 - 10696
Alignment:
Q  360 tcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcggac-aac 458  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| |||| ||| ||| ||||||||||| || | ||     
T  10893 tcatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaag 10794  T
Q  459 tccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccg 558  Q
    |||||||||||| |||||    |||||||  || | || |||| ||||||| ||| ||||||||| | ||||||||||||  | ||| ||||||||||||    
T  10793 tccatacagagc-ttgct----ctggctttaaatg-gggccccacaagtggacggtgggattggtcccctcgaattagtcaattctt-gatcggataccg 10701  T

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Target: scaffold0068 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 356 - 563
Target Start/End: Complemental strand, 41848 - 41646
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcggcg-ga 454  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| ||||||||   |||| ||| ||| |||||||| | || |||||||||  | |     
T  41848 taacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcttgttccaatttcgttgtgc 41749  T
Q  455 caactccatacagagctttgctttggctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggat 554  Q
     || |||||||||||| |||||    |||||||  |||| |||||| ||||||||||   ||||||||| | |||| |||||||| | ||| ||||||||    
T  41748 taagtccatacagagc-ttgct----ctggctttaaacggggcccctgcaagtgggcaatgggattggtcccctcggattagtcgattctt-gatcggat 41655  T
Q  555 accgagttt 563  Q
    || ||||||    
T  41654 acagagttt 41646  T

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Target: scaffold1175 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 2509 - 2427
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| ||||||| ||||||| ||||||||||||||||    
T  2509 ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccgagttt 2427  T

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Target: scaffold0380 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 244 - 343
Target Start/End: Original strand, 10459 - 10558
Alignment:
Q  244 ggatagcatatagcggtatgataaataacgaccattgatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatat 343  Q
    ||||||| ||||||||||||| | ||| ||  ||  |||||||||||||||||||||||| | ||||  |||||||||||||||| |||||||| |||||    
T  10459 ggatagcgtatagcggtatgacatatagcggtcaccgatatttgattattttttggacaaataacatcaataatactataaagtataaacaaacctatat 10558  T

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Target: scaffold0199 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 356 - 450
Target Start/End: Complemental strand, 8611 - 8517
Alignment:
Q  356 taactcattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||   |||| ||| ||| ||||  || |||||||||||||||    
T  8611 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattatctctggtgccaatttcgg 8517  T

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Target: scaffold0199; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 563
Target Start/End: Complemental strand, 8513 - 8452
Alignment:
Q  502 gcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||| ||||||||| | |||| |||||||| | ||| |||||||||||||||||    
T  8513 gcaagtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagttt 8452  T

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Target: scaffold0102 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 39206 - 39288
Alignment:
Q  481 ctggcttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||  |||| ||||||||||||||||||| ||||||||| | |||| |||||||| | |||||||| ||||||||||||    
T  39206 ctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttt 39288  T

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Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 361 - 447
Target Start/End: Original strand, 27774 - 27860
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    |||| |||||||| ||||||||||  ||||||| ||||||| ||||||||||||||| ||  ||| |||||||| ||||||||||||    
T  27774 catttggggttggtctagtggttggtttgggattttggagtttgctcctctcaaggtctcgggttcgattccctgtggtgccaattt 27860  T

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Target: scaffold0460 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 8378 - 8289
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| ||||||||  ||||||||| || ||||||||||||| ||||||||   |||| ||||||| |||||||| |||||||||||||||    
T  8378 catttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcgg 8289  T

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Target: scaffold0172 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 343
Target Start/End: Original strand, 30641 - 30798
Alignment:
Q  186 cataatagtcaatcccggataatggtgtgtagcggttgaccctaaaagtgggatagaaggatagcatatagcggtatgataaataacgaccattgatatt 285  Q
    |||| |||||||||||||||| ||||  ||||| |  ||||| |||| ||||||||  ||||||  |||||| |||||| ||| | ||  ||  ||||||    
T  30641 catagtagtcaatcccggatattggttcgtagcagccgaccccaaaactgggatagcgggatagggtatagcagtatgacaaacagcggtcaccgatatt 30740  T
Q  286 tgattattttttggacaagttacatgtataatactataaagtacaaacaaacttatat 343  Q
    |||| ||||||||||||| ||| ||| ||||| | |||||| | ||||||||||||||    
T  30741 tgatcattttttggacaaattatatgaataattccataaagcataaacaaacttatat 30798  T

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Target: scaffold0072 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 244 - 340
Target Start/End: Original strand, 6011 - 6107
Alignment:
Q  244 ggatagcatatagcggtatgataaataacgaccattgatatttgattattttttggacaagttacatgtataatactataaagtacaaacaaactta 340  Q
    ||||||| ||||||||||||| ||||| ||  ||   |||||||||||||||||||| || ||||||| ||||| |||| ||||| |||||||||||    
T  6011 ggatagcgtatagcggtatgacaaatagcggtcaccaatatttgattattttttggaaaaattacatgaataatgctatgaagtataaacaaactta 6107  T

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Target: scaffold0328 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 361 - 450
Target Start/End: Original strand, 14989 - 15078
Alignment:
Q  361 cattaggggttggcctagtggttgacttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttcgg 450  Q
    |||| ||||||||||||||||||| | |||||||||||||| ||||||||   |||| ||| |||  ||||||| |||||| ||||||||    
T  14989 catttggggttggcctagtggttggcctgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgctaatttcgg 15078  T

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Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 490 - 563
Target Start/End: Complemental strand, 13121 - 13048
Alignment:
Q  490 aacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||| ||||||||||||||| ||| ||||||| | | |||  |||||| | | |||||||||||||||||||||    
T  13121 aacggggcccccgcaagtggacggtgggattgatcccctcagattagttgattcttggatcggataccgagttt 13048  T

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Target: scaffold1712 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 486 - 563
Target Start/End: Complemental strand, 685 - 608
Alignment:
Q  486 ttagaacgaggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||| | ||||||||||||||||| ||||||||| |  || ||||||||||||| | |||| ||||| ||||||    
T  685 ttagaacgggacccccgcaagtgggcggagggattggttccatcaaattagtcggtccgtcgatcagatactgagttt 608  T

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Target: scaffold0157 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 20246 - 20307
Alignment:
Q  387 ttgggatcttggagtgtgctcctctcaaggtttcaagtttgattccctatggtgccaatttc 448  Q
    ||||||||||||||| |||||||   ||||| ||| |||||||||||| |||||||||||||    
T  20246 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttc 20307  T

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Target: scaffold0240 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 370 - 410
Target Start/End: Complemental strand, 12944 - 12904
Alignment:
Q  370 ttggcctagtggttgacttgggatcttggagtgtgctcctc 410  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  12944 ttggcctagtggttgacttgggatcttggagttcgctcctc 12904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 495 - 563
Target Start/End: Original strand, 32416 - 32483
Alignment:
Q  495 ggcccccgcaagtgggcggcgggattggtgctctcgaattagtcggtccttggatcggataccgagttt 563  Q
    |||||||||||||||| || ||||||||| | |||| |||||||| | ||| |||||||||||||||||    
T  32416 ggcccccgcaagtgggtggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttt 32483  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 240930 - 240887
Alignment:
Q  387 ttgggatcttggagtgtgctcctctcaaggtttcaagtttgatt 430  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||    
T  240930 ttgggatcttggagtatgctcctctcaaggtctcatgtttgatt 240887  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 386 - 447
Target Start/End: Original strand, 18329 - 18391
Alignment:
Q  386 cttgggatcttggagtgtgctcctc-tcaaggtttcaagtttgattccctatggtgccaattt 447  Q
    ||||| |||| ||| |||||||||| ||||||||||| ||||||||| || ||||||||||||    
T  18329 cttggaatctgggattgtgctcctcctcaaggtttcaggtttgattctctctggtgccaattt 18391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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