View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5654_1D_low_23 (Length: 317)
Name: NF5654_1D_low_23
Description: NF5654_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5654_1D_low_23 |
 | |
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| [»] scaffold0029 (1 HSPs) |
| |
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| [»] scaffold0002 (2 HSPs) |
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| [»] chr4 (11 HSPs) |
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|
| [»] chr5 (4 HSPs) |
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| [»] chr1 (7 HSPs) |
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| [»] chr3 (12 HSPs) |
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| [»] chr7 (7 HSPs) |
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| [»] chr8 (5 HSPs) |
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| [»] chr2 (13 HSPs) |
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| [»] scaffold0131 (1 HSPs) |
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| [»] chr6 (6 HSPs) |
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| [»] scaffold0418 (1 HSPs) |
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Alignment Details
Target: scaffold0029 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 7 - 317
Target Start/End: Original strand, 134455 - 134765
Alignment:
| Q |
7 |
tgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagcta |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
134455 |
tgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagggttggagatggagcta |
134554 |
T |
|
| Q |
107 |
atacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
134555 |
atacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc |
134654 |
T |
|
| Q |
207 |
agacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggct |
306 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
134655 |
agacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggct |
134754 |
T |
|
| Q |
307 |
ttacttcttga |
317 |
Q |
| |
|
||||||||||| |
|
|
| T |
134755 |
ttacttcttga |
134765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 283; Significance: 1e-158; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 7 - 317
Target Start/End: Original strand, 312282 - 312592
Alignment:
| Q |
7 |
tgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagcta |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312282 |
tgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagggttggagatggagcta |
312381 |
T |
|
| Q |
107 |
atacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312382 |
atacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc |
312481 |
T |
|
| Q |
207 |
agacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggct |
306 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312482 |
agacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggct |
312581 |
T |
|
| Q |
307 |
ttacttcttga |
317 |
Q |
| |
|
||||||||||| |
|
|
| T |
312582 |
ttacttcttga |
312592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 7 - 317
Target Start/End: Original strand, 327736 - 328046
Alignment:
| Q |
7 |
tgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagcta |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
327736 |
tgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagggttggagatggagcta |
327835 |
T |
|
| Q |
107 |
atacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
327836 |
atacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc |
327935 |
T |
|
| Q |
207 |
agacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggct |
306 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
327936 |
agacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggct |
328035 |
T |
|
| Q |
307 |
ttacttcttga |
317 |
Q |
| |
|
||||||||||| |
|
|
| T |
328036 |
ttacttcttga |
328046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 276; Significance: 1e-154; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 30 - 317
Target Start/End: Original strand, 8654697 - 8654984
Alignment:
| Q |
30 |
tcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggatagg |
129 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654697 |
tcttaggggtagtgttggtgctggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggatagg |
8654796 |
T |
|
| Q |
130 |
tggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcgg |
229 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654797 |
tggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcgg |
8654896 |
T |
|
| Q |
230 |
agcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654897 |
agcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
8654984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 3129577 - 3129890
Alignment:
| Q |
1 |
gtttggtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatg |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||| ||||| |||||| | || ||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
3129577 |
gtttcgtgttggtggagggaggtgagtcgttttaggggtagtgatggtgatggagagggcggctggtttgttgatcatgtggctaggagggttggagatg |
3129676 |
T |
|
| Q |
101 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
200 |
Q |
| |
|
||||| |||| ||||||||||| | |||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
3129677 |
gagctgatacattgttttggtttggtaggtggttaggggatgttcctttttgtgtccgttttagtagactgtttgagttaacagagaataagttcatgtc |
3129776 |
T |
|
| Q |
201 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
300 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||| |||||| ||||||||||| |||| | |||||||||||||||||| |||||||||||||| |
|
|
| T |
3129777 |
tgtggcagacttgttctctattgattcggagcagctaggggttacgtggaggtggagacgttgtttgtggcagtgggaggag---atgttagcggagtgt |
3129873 |
T |
|
| Q |
301 |
agggctttacttcttga |
317 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
3129874 |
agggctttacttcttga |
3129890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 64 - 317
Target Start/End: Complemental strand, 47541406 - 47541154
Alignment:
| Q |
64 |
tggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttcc |
163 |
Q |
| |
|
||||||| ||||| ||||||||| ||| |||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47541406 |
tggtttgttgatcatgtggctagaagg-ttggagatggagatgatacgttgttttggtttgataggtggttaggggatgttcctttttgtgttcgttttt |
47541308 |
T |
|
| Q |
164 |
gtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtag |
263 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| ||| |||||||||||| |||| | |
|
|
| T |
47541307 |
gtagactgtttgagttaacagagaataagttcatgtctgtggcagacttgttttctgttgattcggagcagccgggagttatgtggaggtggagacgtcg |
47541208 |
T |
|
| Q |
264 |
gttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
47541207 |
tttgtggcagtggaaggaggagatgttagcggagtgtagggctttacttcttga |
47541154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 115 - 317
Target Start/End: Complemental strand, 2631829 - 2631627
Alignment:
| Q |
115 |
ttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgt |
214 |
Q |
| |
|
||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
2631829 |
ttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtggccgacttgc |
2631730 |
T |
|
| Q |
215 |
tatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttct |
314 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||| |
|
|
| T |
2631729 |
tctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttct |
2631630 |
T |
|
| Q |
315 |
tga |
317 |
Q |
| |
|
||| |
|
|
| T |
2631629 |
tga |
2631627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 133 - 317
Target Start/End: Original strand, 7662966 - 7663150
Alignment:
| Q |
133 |
ttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagc |
232 |
Q |
| |
|
|||||||||||||| || ||||| ||||| ||||| |||||||||||| |||||||||| | |||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
7662966 |
ttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaatagagaataagctcatgtctatggcagacttgttctctgttgatttggagc |
7663065 |
T |
|
| Q |
233 |
agtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
|| |||| |||| |||||||||| ||||| |||||||||||||||||||| |||||| |||||||| ||||||||||||||| |
|
|
| T |
7663066 |
agcaggggtttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagtggagtgtatggctttacttcttga |
7663150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 114 - 317
Target Start/End: Complemental strand, 20675454 - 20675251
Alignment:
| Q |
114 |
gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
213 |
Q |
| |
|
|||||||| ||||||||||||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| ||| || ||||| |||||| |
|
|
| T |
20675454 |
gttttggtctgataggtggttaggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatatccgtggccgacttg |
20675355 |
T |
|
| Q |
214 |
ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
313 |
Q |
| |
|
| | |||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||| ||| | | ||||||||| ||||||||| |
|
|
| T |
20675354 |
ctctttgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgcttgatgagtgtaggactttacttc |
20675255 |
T |
|
| Q |
314 |
ttga |
317 |
Q |
| |
|
|||| |
|
|
| T |
20675254 |
ttga |
20675251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 23873240 - 23873387
Alignment:
| Q |
170 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtg |
269 |
Q |
| |
|
|||||||||||||||||||||||| |||||| || || |||||| | |||||||||||||||| |||||||| |||||||||||| |||||||| || |
|
|
| T |
23873240 |
tgtttgagttaacagagaataagtctatgtccgttgccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggtaatg |
23873339 |
T |
|
| Q |
270 |
gcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
||||||||||||||| ||| ||| ||||||||||||||||||||||| |
|
|
| T |
23873340 |
gcagtgggaggaggagttgctagatgagtgtagggctttacttcttga |
23873387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 170 - 317
Target Start/End: Complemental strand, 55298996 - 55298849
Alignment:
| Q |
170 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtg |
269 |
Q |
| |
|
|||||||||||||||||||||||| |||||| || || |||||| | |||||||||||||||| |||||||| |||||||||||| |||||| || || |
|
|
| T |
55298996 |
tgtttgagttaacagagaataagtctatgtccgttgccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtagtttatg |
55298897 |
T |
|
| Q |
270 |
gcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
||||||||||||||| ||| ||| ||||||||||||||||||||||| |
|
|
| T |
55298896 |
gcagtgggaggaggagttgctagatgagtgtagggctttacttcttga |
55298849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 317
Target Start/End: Original strand, 8486699 - 8486892
Alignment:
| Q |
124 |
gataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttg |
223 |
Q |
| |
|
||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || | |||||| | ||||||| |
|
|
| T |
8486699 |
gataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtcgtcgacttgctctctgttg |
8486798 |
T |
|
| Q |
224 |
attcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
||||||| | |||||||| |||||||||||| ||||||||| |||||||||||| |||| ||| ||| |||||||||||||||||||||| |
|
|
| T |
8486799 |
attcggaccggtggggggaggtgtggaggtggagacgtaggttatggcagtgggagaaggagttgctagattagtgtagggctttacttcttga |
8486892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7662904 - 7662952
Alignment:
| Q |
1 |
gtttggtgttggtggagggaggtgagtcgtcttaggggtagtgttggtg |
49 |
Q |
| |
|
|||| |||||||||| |||||||||||||| |||||| ||||| ||||| |
|
|
| T |
7662904 |
gtttcgtgttggtggggggaggtgagtcgtattagggatagtggtggtg |
7662952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 49926133 - 49926177
Alignment:
| Q |
273 |
gtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||| || ||||| |
|
|
| T |
49926133 |
gtgggaggaggagttgttagtggagtgtagggcttttctgcttga |
49926177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 10486515 - 10486831
Alignment:
| Q |
1 |
gtttggtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatg |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| | | ||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
10486515 |
gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagtgcagctggtttgttgatcatgtggctaggagggttggagatg |
10486614 |
T |
|
| Q |
101 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
200 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
10486615 |
gagctgatacgttgttttggttggataggtggttaggggatcttcctttttgtgtccgttttcgtaggctgtttgagttaacatagaataagttcatgtc |
10486714 |
T |
|
| Q |
201 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
300 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10486715 |
tgtggcagacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtaggttgtggcagtgggaggaggacatgttagcggagtgt |
10486814 |
T |
|
| Q |
301 |
agggctttacttcttga |
317 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
10486815 |
agggctttacttcttga |
10486831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 85 - 317
Target Start/End: Complemental strand, 34481408 - 34481176
Alignment:
| Q |
85 |
aggagggttggagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacag |
184 |
Q |
| |
|
||||| ||||| ||||| ||| |||| | |||||||| ||||||||||||||||| |||||| ||||||| | || || || ||||||||||||||| |
|
|
| T |
34481408 |
aggagagttggtgatggggctgatacttcgttttggtccgataggtggttaggggaggttcctctttgtgtgaggtttagtcggttgtttgagttaacag |
34481309 |
T |
|
| Q |
185 |
agaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggagga |
284 |
Q |
| |
|
||||||||| ||||||||||||| | ||| | |||||||||||||||| |||||||| |||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
34481308 |
agaataagtctatgtctgtggcatatttgctctctgttgattcggagcggtggggggaagtgtggaggtggagacgtaggttatggcagtgggaggaggg |
34481209 |
T |
|
| Q |
285 |
cttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
||| ||| |||||||||||||||||||||||| |
|
|
| T |
34481208 |
gttgctagaggagtgtagggctttacttcttga |
34481176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 587859 - 587745
Alignment:
| Q |
203 |
tggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtag |
302 |
Q |
| |
|
||||| ||||||| ||||| ||||||||| ||||||| | | |||||||||| |||||| | ||| |||||||||||| |||||| ||||||||| |
|
|
| T |
587859 |
tggcaaacttgttctctgtgagttcggagcattggggggatgtctggaggtggaggcgtaggctatggatgtgggaggaggatatgttagaggagtgtag |
587760 |
T |
|
| Q |
303 |
ggctttacttcttga |
317 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
587759 |
ggctttacttcttga |
587745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 27795756 - 27795720
Alignment:
| Q |
273 |
gtgggaggaggacttgttagcggagtgtagggcttta |
309 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
27795756 |
gtgggaggaggacttggtagaggagtgtagggcttta |
27795720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 26 - 317
Target Start/End: Complemental strand, 21528685 - 21528390
Alignment:
| Q |
26 |
gtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttgga |
125 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||| |||||||||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
21528685 |
gtcgtcttaggggtagtgatggtgatggagagagcggatggtttgttgatcatgtggctaggagggttggagatgaagctgatacgttgttttggttgga |
21528586 |
T |
|
| Q |
126 |
taggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgat |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| | ||||||||| ||||||||| |
|
|
| T |
21528585 |
taggtggttaggggatgttcctttttgtgtccgttttcgtaggctgtttgagttaacagagaataagttcatgtctgttggagacttgttctctgttgat |
21528486 |
T |
|
| Q |
226 |
tcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggag----tgtagggctttacttcttga |
317 |
Q |
| |
|
|||||||| ||||||||| |||||||||||| ||||||||| ||| |||||||||||||| ||||||||| | ||||||||||||||||||| |
|
|
| T |
21528485 |
tcggagcaatggggggttatgtggaggtggagacgtaggttatggtagtgggaggaggacatgttagcggtggagacgtagggctttacttcttga |
21528390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 9 - 317
Target Start/End: Complemental strand, 36306321 - 36306013
Alignment:
| Q |
9 |
ttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagctaat |
108 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||| ||| || || |||| ||||||| | | ||||||||||||||||||||||| || || |
|
|
| T |
36306321 |
ttggtggagggaggtgagtcgtcttagtgatagtgttagtgagggtgattgtgggtggtttgtcggccacgtggctaggagggttggagatggttctgat |
36306222 |
T |
|
| Q |
109 |
acgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcag |
208 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| ||||| | ||| ||||| |||||||||||||| ||||||||| | |||| |||||||| |
|
|
| T |
36306221 |
acgttgttttggtatgataggtggttaggggatgttcctttctgtgtcctttttcgtagactgtttgagttaacggagaataagctcatgtatgtggcag |
36306122 |
T |
|
| Q |
209 |
acttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggcttt |
308 |
Q |
| |
|
||||||| |||||||||| ||||||| ||||||| | |||||||||| ||||| |||||||||||| ||||||| |||||| ||||||||||||||| |
|
|
| T |
36306121 |
acttgttctctgttgatttggagcagcagggggttgtttggaggtggaggcgtagattgtggcagtggaaggaggagatgttagaggagtgtagggcttt |
36306022 |
T |
|
| Q |
309 |
acttcttga |
317 |
Q |
| |
|
||||||||| |
|
|
| T |
36306021 |
acttcttga |
36306013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 97 - 317
Target Start/End: Complemental strand, 37531015 - 37530795
Alignment:
| Q |
97 |
gatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagttta |
196 |
Q |
| |
|
||||| ||| |||| | |||||||| ||||||||||||||||| |||||| ||||||| | | || || ||||||||||||||||||||||| || |
|
|
| T |
37531015 |
gatggggctgatacttcgttttggtctgataggtggttaggggaggttcctctttgtgtgagacttagtcggttgtttgagttaacagagaataagacta |
37530916 |
T |
|
| Q |
197 |
tgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcgga |
296 |
Q |
| |
|
||| ||||||||||||| | |||||||||||||||| |||||||| |||||||||||| ||||||||| |||||||||||||||| ||| ||| ||| |
|
|
| T |
37530915 |
tgtatgtggcagacttgctctctgttgattcggagcggtggggggaagtgtggaggtggagacgtaggttatggcagtgggaggaggggttgctagagga |
37530816 |
T |
|
| Q |
297 |
gtgtagggctttacttcttga |
317 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
37530815 |
gtgtagggctttacttcttga |
37530795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 32353061 - 32353208
Alignment:
| Q |
170 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtg |
269 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||| |||||| | |||||||||||||||| |||||||| |||||||||||| ||||||||| || |
|
|
| T |
32353061 |
tgtttgagttaacagagaataagtctatgtccgtggccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatg |
32353160 |
T |
|
| Q |
270 |
gcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
||||||| ||||||| ||| ||| ||||||||||||||||||||||| |
|
|
| T |
32353161 |
gcagtggaaggaggagttgctagatgagtgtagggctttacttcttga |
32353208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 114 - 317
Target Start/End: Original strand, 48073139 - 48073342
Alignment:
| Q |
114 |
gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
213 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || || |||||| |
|
|
| T |
48073139 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg |
48073238 |
T |
|
| Q |
214 |
ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
313 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||| ||||||||| ||| ||||||||||||| ||| ||| |||||| |||||||||||| |
|
|
| T |
48073239 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatgggagtgggaggaggagttgctagatgagtgtggggctttacttc |
48073338 |
T |
|
| Q |
314 |
ttga |
317 |
Q |
| |
|
|||| |
|
|
| T |
48073339 |
ttga |
48073342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 236 - 317
Target Start/End: Original strand, 48265548 - 48265629
Alignment:
| Q |
236 |
ggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
48265548 |
ggggggttatgtggaggtggagacgtaggttgtggcagtgggaggaggagttgttagcggagtgtagggctttacttcttga |
48265629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 30970447 - 30970519
Alignment:
| Q |
245 |
tgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
|||||||||||| ||||| |||||| |||||||||||| || | |||||||||||||| ||||||||||| |
|
|
| T |
30970447 |
tgtggaggtggaggcgtagattgtgggcgtgggaggaggagatggtggcggagtgtagggccttacttcttga |
30970519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 33 - 317
Target Start/End: Original strand, 49731559 - 49731843
Alignment:
| Q |
33 |
taggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggataggtgg |
132 |
Q |
| |
|
||||||||||| ||||| |||||| | || ||||||| ||||| |||||||||||||||||||||||||||| | || ||||||||||| ||||||||| |
|
|
| T |
49731559 |
taggggtagtgatggtgatggagagtgcggctggtttgttgatcatgtggctaggagggttggagatggagctgacacattgttttggtttgataggtgg |
49731658 |
T |
|
| Q |
133 |
ttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagc |
232 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||| |
|
|
| T |
49731659 |
ttaggggatgttcctttttgtgtccgttttcgtagactgtttgagttaacagagaataagttcatgtatgtggcagacttgttctctgttgatccggagc |
49731758 |
T |
|
| Q |
233 |
agtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
|| |||||||| |||||||||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
49731759 |
agcggggggttatgtggaggtggagacgtagtttgtggcagtgggaggaggagttgttggcggagtgtagggctttacttcttga |
49731843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 6 - 317
Target Start/End: Original strand, 30166944 - 30167255
Alignment:
| Q |
6 |
gtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagct |
105 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||| ||||| || || |||| |||||||||| || ||||||||||||||||| ||||| || |
|
|
| T |
30166944 |
gtgttggtggagggaggtgagtcgtattagggatagtgctggtgagggtgactgtgggtggtttggtggtcacgtggctaggagggttggtgatggttct |
30167043 |
T |
|
| Q |
106 |
aatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtgg |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||| ||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
30167044 |
gatacgttgttttggttggataggtggttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaacagagaataagctcatgtttgtgg |
30167143 |
T |
|
| Q |
206 |
cagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggc |
305 |
Q |
| |
|
|||||||||| ||||||||| ||||||| ||| ||||| |||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
30167144 |
cagacttgttctctgttgatctggagcagcagggtgttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagcggagtgtaggac |
30167243 |
T |
|
| Q |
306 |
tttacttcttga |
317 |
Q |
| |
|
|||||||||||| |
|
|
| T |
30167244 |
tttacttcttga |
30167255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 114 - 317
Target Start/End: Original strand, 2813208 - 2813411
Alignment:
| Q |
114 |
gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
213 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || || |||||| |
|
|
| T |
2813208 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg |
2813307 |
T |
|
| Q |
214 |
ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
313 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
2813308 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc |
2813407 |
T |
|
| Q |
314 |
ttga |
317 |
Q |
| |
|
|||| |
|
|
| T |
2813408 |
ttga |
2813411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 114 - 317
Target Start/End: Complemental strand, 29309840 - 29309637
Alignment:
| Q |
114 |
gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
213 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| ||||| |||||| |
|
|
| T |
29309840 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtggccgacttg |
29309741 |
T |
|
| Q |
214 |
ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
313 |
Q |
| |
|
| ||||| |||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||| ||||||| |
|
|
| T |
29309740 |
ctctctgtcgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggcgttacttc |
29309641 |
T |
|
| Q |
314 |
ttga |
317 |
Q |
| |
|
|||| |
|
|
| T |
29309640 |
ttga |
29309637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 114 - 317
Target Start/End: Original strand, 6176186 - 6176389
Alignment:
| Q |
114 |
gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
213 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||| ||||||||||| |||||| || || |||||| |
|
|
| T |
6176186 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttagacggttgtttgagttaatagagaataagtctatgtccgtcgccgacttg |
6176285 |
T |
|
| Q |
214 |
ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
313 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||| ||||||||| | ||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
6176286 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatagcagtgggaggaggagttgctagatgagtgtagggctttacttc |
6176385 |
T |
|
| Q |
314 |
ttga |
317 |
Q |
| |
|
|||| |
|
|
| T |
6176386 |
ttga |
6176389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 196 - 317
Target Start/End: Complemental strand, 9379447 - 9379326
Alignment:
| Q |
196 |
atgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcgg |
295 |
Q |
| |
|
|||| ||||||| ||||||| | ||||||||| ||||||||||||| |||||||||||||| || ||||| |||||||||||||||| ||||||||| |
|
|
| T |
9379447 |
atgtatgtggcaaacttgttctatgttgattcagagcagtggggggatttgtggaggtggaggcgcaggttatggcagtgggaggaggggatgttagcgg |
9379348 |
T |
|
| Q |
296 |
agtgtagggctttacttcttga |
317 |
Q |
| |
|
|||||||||| ||||| ||||| |
|
|
| T |
9379347 |
agtgtagggcattactacttga |
9379326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 23602074 - 23602002
Alignment:
| Q |
245 |
tgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
|||||||||||| || |||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||||| |
|
|
| T |
23602074 |
tgtggaggtggagacataggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttcttga |
23602002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 25872955 - 25873019
Alignment:
| Q |
253 |
tggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
|||| ||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||| |||| |
|
|
| T |
25872955 |
tggagacgtaggttatggcagtgggaggaggggttgctagaggagtgtagggctttactttttga |
25873019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 46248738 - 46248776
Alignment:
| Q |
274 |
tgggaggaggacttgttagcggagtgtagggctttactt |
312 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
46248738 |
tgggaggaagacttgttaggggagtgtagggctttactt |
46248776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 311
Target Start/End: Original strand, 48569906 - 48569944
Alignment:
| Q |
273 |
gtgggaggaggacttgttagcggagtgtagggctttact |
311 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
48569906 |
gtgggaggaggacttggtagaggagtgtagggctttact |
48569944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 8943653 - 8943596
Alignment:
| Q |
245 |
tgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtag |
302 |
Q |
| |
|
|||||| ||||| ||||||||||||| ||||||||| || |||| |||||||||||| |
|
|
| T |
8943653 |
tgtggaagtggagacgtaggttgtgggcgtgggaggaagatttgtaagcggagtgtag |
8943596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 46908372 - 46908428
Alignment:
| Q |
109 |
acgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgt |
165 |
Q |
| |
|
|||||||||||||| |||| ||| |||| ||||||||||||||||||||| |||| |
|
|
| T |
46908372 |
acgttgttttggtttgataaatggctaggacatgttcctttttgtgttcgttaccgt |
46908428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 180; Significance: 3e-97; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 6 - 317
Target Start/End: Original strand, 15653305 - 15653616
Alignment:
| Q |
6 |
gtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagct |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| || || |||| ||||||| || | |||||||||||||||||||||||| || |
|
|
| T |
15653305 |
gtgttggtggagggaggtgagtcgtcttagggatagtgttggtgagggtgattgtgggtggtttgttggccacgtggctaggagggttggagatggatct |
15653404 |
T |
|
| Q |
106 |
aatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtgg |
205 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||| | |||||| ||| |
|
|
| T |
15653405 |
gatacgttgttttggtttgataggtggttaggggatgttcctttttgtgcccgttttcgtagactgtttgagttaacggagaataagctcatgtctatgg |
15653504 |
T |
|
| Q |
206 |
cagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggc |
305 |
Q |
| |
|
|||||||||| |||||||||| ||||||| ||||||||| |||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
15653505 |
cagacttgttctctgttgatttggagcagcagggggttttctggaggtggaggcgtagattgtggcagtgggaggaggagatgttagcggagtgtagggc |
15653604 |
T |
|
| Q |
306 |
tttacttcttga |
317 |
Q |
| |
|
|||||||||||| |
|
|
| T |
15653605 |
tttacttcttga |
15653616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 6 - 273
Target Start/End: Complemental strand, 46624233 - 46623966
Alignment:
| Q |
6 |
gtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagct |
105 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||| | || || |||| ||||||| || || ||||||||||||||| ||||||| || |
|
|
| T |
46624233 |
gtgttggtggagggaggtgagtcgtattagggatagtgttggcgagggtgactgtgggtggtttgttggtcacgtggctaggagggttagagatggttct |
46624134 |
T |
|
| Q |
106 |
aatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtgg |
205 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| || || |||||||||||||| ||||||||| | |||||||||| |
|
|
| T |
46624133 |
gatacgttgttttggtttgataggtggttaggggatgttcctttctgtgtccgttttcgcagactgtttgagttaacggagaataagctcatgtctgtgg |
46624034 |
T |
|
| Q |
206 |
cagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcag |
273 |
Q |
| |
|
|||||||||| |||||||||| ||||||| ||| |||| |||||||||| ||||| ||||||||| |
|
|
| T |
46624033 |
cagacttgttctctgttgatttggagcagcagggatttttttggaggtggaggcgtagtttgtggcag |
46623966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 114 - 317
Target Start/End: Complemental strand, 13440485 - 13440282
Alignment:
| Q |
114 |
gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
213 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || || |||||| |
|
|
| T |
13440485 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg |
13440386 |
T |
|
| Q |
214 |
ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
313 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||| |||||| || ||| ||||||||||||| ||| ||| |||||| |||||||||||| |
|
|
| T |
13440385 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtagtttatggtagtgggaggaggagttgctagatgagtgttgggctttacttc |
13440286 |
T |
|
| Q |
314 |
ttga |
317 |
Q |
| |
|
|||| |
|
|
| T |
13440285 |
ttga |
13440282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 114 - 305
Target Start/End: Original strand, 12378436 - 12378627
Alignment:
| Q |
114 |
gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
213 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||| | |||| || | | ||| ||||||||||||| ||||||||| | |||||||||||| | ||| |
|
|
| T |
12378436 |
gttttggtatgataggtggataggggatgttcctctctgtgagcggtatcatagactgtttgagttaatggagaataagatcatgtctgtggcaaatttg |
12378535 |
T |
|
| Q |
214 |
ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggc |
305 |
Q |
| |
|
|| | |||| | ||| ||| |||||||| ||||| |||| ||| || ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
12378536 |
ttctttgttaagtcgaagcggtggggggatttgttgaggcggaggcgcaggttgtggcagtgggaggaggagatgttagcggagtgtagggc |
12378627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 45943152 - 45943080
Alignment:
| Q |
245 |
tgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
|||||||||||| | |||| || ||||||||||||||||| ||| ||| |||||||||||||||||||||||| |
|
|
| T |
45943152 |
tgtggaggtggagatgtagattatggcagtgggaggaggagttgctagaggagtgtagggctttacttcttga |
45943080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 43105669 - 43105546
Alignment:
| Q |
188 |
ataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggactt |
287 |
Q |
| |
|
|||||| | |||| |||||||||||||| ||| | |||| | || ||||| | |||||||||||||| || ||||||||||| ||||||||||| | |
|
|
| T |
43105669 |
ataagtctttgtcggtggcagacttgttctctactagttcgcaacaatggggagatttgtggaggtggaggcgcaggttgtggcaatgggaggaggagat |
43105570 |
T |
|
| Q |
288 |
gttagcggagtgtagggctttact |
311 |
Q |
| |
|
|||||| ||||||||||| ||||| |
|
|
| T |
43105569 |
gttagcagagtgtagggcgttact |
43105546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 27723973 - 27724011
Alignment:
| Q |
274 |
tgggaggaggacttgttagcggagtgtagggctttactt |
312 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
27723973 |
tgggaggaagacttgttaggggagtgtagggctttactt |
27724011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 161; Significance: 7e-86; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 7452897 - 7452581
Alignment:
| Q |
1 |
gtttggtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatg |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| ||||||||||| || || |||| |||||| | | |||||||||||||||||||||| |
|
|
| T |
7452897 |
gtttcgtgttggtggagggaggtgagtcgtcttagggatagtgttggtgagggtgattgtgggtggtttctcgcccacgtggctaggagggttggagatg |
7452798 |
T |
|
| Q |
101 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtc |
200 |
Q |
| |
|
| || ||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||| ||||||||| ||||||| |
|
|
| T |
7452797 |
gttctgatacgttgttttggtatgataggtggttaggggatgttcctttctgtgtccgttttcgtagactgtttgagttaacggagaataagcttatgtc |
7452698 |
T |
|
| Q |
201 |
tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgt |
300 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||| ||||||| | |||||||||| ||||| ||||||||||||||||||| || |||| ||||||| |
|
|
| T |
7452697 |
tgtggcagacttgttctctgttgatttggagcagcagggggttgtttggaggtggaggcgtagattgtggcagtgggaggaggtgttattagaggagtgt |
7452598 |
T |
|
| Q |
301 |
agggctttacttcttga |
317 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
7452597 |
agggctttacttcttga |
7452581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 115 - 314
Target Start/End: Original strand, 16420719 - 16420918
Alignment:
| Q |
115 |
ttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgt |
214 |
Q |
| |
|
||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
16420719 |
ttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtggccgacttgc |
16420818 |
T |
|
| Q |
215 |
tatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttct |
314 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||| ||| ||| ||| |||||||||||||||| |
|
|
| T |
16420819 |
tctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagcgtagggctttacttct |
16420918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 19384572 - 19384621
Alignment:
| Q |
268 |
tggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
19384572 |
tggcagtgggaggaggagatgttagtggagtgtagggctttacttcttga |
19384621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 12134628 - 12134563
Alignment:
| Q |
246 |
gtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttact |
311 |
Q |
| |
|
|||||||||| |||| ||||||| |||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
12134628 |
gtggaggtggcggcgtacgttgtgggcgtgggaggaggacttggtagaggagtgtagggctttact |
12134563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 13879354 - 13879390
Alignment:
| Q |
273 |
gtgggaggaggacttgttagcggagtgtagggcttta |
309 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
13879354 |
gtgggaggaggacttggtagaggagtgtagggcttta |
13879390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 149; Significance: 1e-78; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 6 - 317
Target Start/End: Complemental strand, 45422060 - 45421748
Alignment:
| Q |
6 |
gtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagct |
105 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||| ||||| || || |||| |||||||||| || ||||||||||||||||| ||||| || |
|
|
| T |
45422060 |
gtgttggtggagggaggtgagtcgtattagggatagtgctggtgagggtgactgtgggtggtttggtggtcacgtggctaggagggttggtgatggttct |
45421961 |
T |
|
| Q |
106 |
aatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtgg |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||| ||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
45421960 |
gatacgttgttttggttggataggtggttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaacagagaataagctcatgtatgtgg |
45421861 |
T |
|
| Q |
206 |
cagacttgttatctgttgattcggagcag-tggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtaggg |
304 |
Q |
| |
|
|||||||||| ||||||||| ||||||| |||| |||| |||||||||| ||||| |||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
45421860 |
cagacttgttctctgttgatctggagcagcaggggttttttttggaggtggaggcgtagattgtcgcagtgggaggaggagatgttagcggagtgtaggg |
45421761 |
T |
|
| Q |
305 |
ctttacttcttga |
317 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
45421760 |
cttttcttcttga |
45421748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 7 - 317
Target Start/End: Complemental strand, 13550663 - 13550353
Alignment:
| Q |
7 |
tgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagcta |
106 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||||||| || | || || ||||||| |||| ||| ||||| ||||| ||||| || |
|
|
| T |
13550663 |
tgttggtggtcggaggtgagtcgtcttaggggtagggttggtgttggtggtagcggctggtttgaggatcaggtgttgaggagagttggtgatggggcag |
13550564 |
T |
|
| Q |
107 |
atacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc |
206 |
Q |
| |
|
|||| | |||||||| ||||||||| ||||||| | |||| || |||| | || || || |||||||||||||||||||||||| ||| | ||||| |
|
|
| T |
13550563 |
atacatcattttggttcgataggtggataggggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacagagaataagtctatattcgtggc |
13550464 |
T |
|
| Q |
207 |
agacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggct |
306 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||| | |||||||||||| ||||||||| ||||||||||| ||||||||| ||| |||||| |||||| |
|
|
| T |
13550463 |
ggacttgctttctgttgattcggagcagtggggggatgtgtggaggtggagacgtaggttatggcagtgggatgaggacttgctagaggagtgcagggct |
13550364 |
T |
|
| Q |
307 |
ttacttcttga |
317 |
Q |
| |
|
||| ||||||| |
|
|
| T |
13550363 |
ttaattcttga |
13550353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 114 - 316
Target Start/End: Original strand, 26894320 - 26894522
Alignment:
| Q |
114 |
gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
213 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| ||||||||| | |||||| |
|
|
| T |
26894320 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtcaccgacttg |
26894419 |
T |
|
| Q |
214 |
ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
313 |
Q |
| |
|
| ||||||| |||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
26894420 |
ctctctgttgcttcggagcggtgggggaaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc |
26894519 |
T |
|
| Q |
314 |
ttg |
316 |
Q |
| |
|
||| |
|
|
| T |
26894520 |
ttg |
26894522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 114 - 316
Target Start/End: Original strand, 26899759 - 26899961
Alignment:
| Q |
114 |
gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
213 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| ||||||||| | |||||| |
|
|
| T |
26899759 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtcaccgacttg |
26899858 |
T |
|
| Q |
214 |
ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
313 |
Q |
| |
|
| ||||||| |||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
26899859 |
ctctctgttgcttcggagcggtgggggaaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc |
26899958 |
T |
|
| Q |
314 |
ttg |
316 |
Q |
| |
|
||| |
|
|
| T |
26899959 |
ttg |
26899961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 170 - 317
Target Start/End: Complemental strand, 43627875 - 43627728
Alignment:
| Q |
170 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtg |
269 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||| |||||| | ||| ||||||||||| |||||||| |||||||||||| ||||||||| || |
|
|
| T |
43627875 |
tgtttgagttaacagagaataagtctatgttcgtggccgacttgctctctattgattcggagaggtggggggaggtgtggaggtggagacgtaggttatg |
43627776 |
T |
|
| Q |
270 |
gcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
||||||||||||||| ||| ||| ||||||||||||||||||||||| |
|
|
| T |
43627775 |
gcagtgggaggaggagttgctagatgagtgtagggctttacttcttga |
43627728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 31085452 - 31085548
Alignment:
| Q |
221 |
ttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
||||||| ||||||||||||| | |||||||||||| | | |||||||| |||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
31085452 |
ttgattcagagcagtggggggatgtgtggaggtggagatgcaggttgtgacagtgggaggaggagctgttagcagagtgtagggctttacttcttga |
31085548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 33548197 - 33548101
Alignment:
| Q |
221 |
ttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||||| |
|
|
| T |
33548197 |
ttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttcttga |
33548101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 241
Target Start/End: Complemental strand, 13551116 - 13550882
Alignment:
| Q |
7 |
tgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagcta |
106 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||||||| || | || || ||||||| |||| ||| ||||| ||||| ||||| || |
|
|
| T |
13551116 |
tgttggtggtcggaggtgagtcgtcttaggggtagggttggtgttggtggtagcggctggtttgaggatcaggtgttgaggagagttggtgatggggcag |
13551017 |
T |
|
| Q |
107 |
atacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc |
206 |
Q |
| |
|
|||| | |||||||| ||||||||| ||||||| | |||| || |||| | || || || |||||||||||||||||||||||| ||| | ||||| |
|
|
| T |
13551016 |
atacatcattttggttcgataggtggataggggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacagagaataagtctatattcgtggc |
13550917 |
T |
|
| Q |
207 |
agacttgttatctgttgattcggagcagtgggggg |
241 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||| |
|
|
| T |
13550916 |
ggacttgctttctgttgattcggagcagtgggggg |
13550882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 22052916 - 22052856
Alignment:
| Q |
257 |
tacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
|||| ||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||| |
|
|
| T |
22052916 |
tacgcaggttatggcagtgggaggaggagttgctagaggagtgtagggctttacttcttga |
22052856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 311
Target Start/End: Complemental strand, 36804196 - 36804147
Alignment:
| Q |
262 |
aggttgtggcagtgggaggaggacttgttagcggagtgtagggctttact |
311 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
36804196 |
aggttgtgggcgtgggaggaggacttgttagaggagtgtagggctttact |
36804147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 311
Target Start/End: Complemental strand, 36804400 - 36804362
Alignment:
| Q |
273 |
gtgggaggaggacttgttagcggagtgtagggctttact |
311 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
36804400 |
gtgggaggaggacttgttagaggagtgtagggctttact |
36804362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 26679266 - 26679226
Alignment:
| Q |
115 |
ttttggttggataggtggttaggggatgttcctttttgtgt |
155 |
Q |
| |
|
|||||||||||||||||| | || ||||||||||||||||| |
|
|
| T |
26679266 |
ttttggttggataggtgggttggtgatgttcctttttgtgt |
26679226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 40176941 - 40176905
Alignment:
| Q |
273 |
gtgggaggaggacttgttagcggagtgtagggcttta |
309 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
40176941 |
gtgggaggaggacttggtagaggagtgtagggcttta |
40176905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0131 (Bit Score: 134; Significance: 9e-70; HSPs: 1)
Name: scaffold0131
Description:
Target: scaffold0131; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 4144 - 4337
Alignment:
| Q |
1 |
gtttggtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatg |
100 |
Q |
| |
|
|||| ||| ||||||||||||||||||||| |||||||||||| ||||| |||||||| || ||||||| ||||| ||||||| ||||||||||||||| |
|
|
| T |
4144 |
gtttcgtggtggtggagggaggtgagtcgtattaggggtagtgatggtgatggagagagcggttggtttgttgatcatgtggctcggagggttggagatg |
4243 |
T |
|
| Q |
101 |
gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtt |
194 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
4244 |
gagctcatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgttttcgtaggctgtttgagttaatagagaataagtt |
4337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 7 - 317
Target Start/End: Complemental strand, 26205887 - 26205577
Alignment:
| Q |
7 |
tgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagcta |
106 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||||||| || | || || |||||| |||| ||| ||||| ||||| |||| ||| |
|
|
| T |
26205887 |
tgttggtggtcggaggtgagtcgtcttaggggtagggttggtgttggtggtagcggttggtttaaggatcaggtgttgaggagagttggtgatgaggctg |
26205788 |
T |
|
| Q |
107 |
atacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc |
206 |
Q |
| |
|
|||| | ||||||||| ||||||||| || |||| | |||| || |||| | || || || |||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
26205787 |
atacatcgttttggttcgataggtggataagggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacaaagaataagtttatgtccgtggc |
26205688 |
T |
|
| Q |
207 |
agacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggct |
306 |
Q |
| |
|
|||||| ||||||||||||| ||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||| |
|
|
| T |
26205687 |
ggacttgctatctgttgattcaaagcggtggggggatttgtggaggtggatacgtaggttatggcagtgggaggaggagttgctagaggagtgtagggct |
26205588 |
T |
|
| Q |
307 |
ttacttcttga |
317 |
Q |
| |
|
||||||||||| |
|
|
| T |
26205587 |
ttacttcttga |
26205577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 317
Target Start/End: Complemental strand, 25318393 - 25318083
Alignment:
| Q |
7 |
tgttggtggagggaggtgagtcgtcttaggggtagtgttggtgccggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagcta |
106 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||| ||||||| || | || || |||||| |||| ||| ||||| ||||| |||| ||| |
|
|
| T |
25318393 |
tgttggtggtcggaggtgagtcgtcttaggtgtagggttggtgttggtggtagcggttggtttaaggatcaggtgttgaggagagttggtgatgaggctg |
25318294 |
T |
|
| Q |
107 |
atacgttgttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggc |
206 |
Q |
| |
|
|||| | ||||||||| ||||||||| || |||| | |||| || |||| | || || || |||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
25318293 |
atacatcgttttggttcgataggtggataagggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacaaagaataagtttatgtccgtggc |
25318194 |
T |
|
| Q |
207 |
agacttgttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggct |
306 |
Q |
| |
|
|||||| ||||||||||||| ||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||| |
|
|
| T |
25318193 |
ggacttgctatctgttgattcaaagcggtggggggatttgtggaggtggatacgtaggttatggcagtgggaggaggagttgctagaggagtgtagggct |
25318094 |
T |
|
| Q |
307 |
ttacttcttga |
317 |
Q |
| |
|
||||||||||| |
|
|
| T |
25318093 |
ttacttcttga |
25318083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 114 - 317
Target Start/End: Original strand, 23347175 - 23347378
Alignment:
| Q |
114 |
gttttggttggataggtggttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg |
213 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||| ||||||| || || | || |||||||||||||||||||||||| |||||| || || |||||| |
|
|
| T |
23347175 |
gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtcgccgacttg |
23347274 |
T |
|
| Q |
214 |
ttatctgttgattcggagcagtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc |
313 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
23347275 |
ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc |
23347374 |
T |
|
| Q |
314 |
ttga |
317 |
Q |
| |
|
|||| |
|
|
| T |
23347375 |
ttga |
23347378 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 317
Target Start/End: Complemental strand, 15674205 - 15674054
Alignment:
| Q |
170 |
tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtgggg----ggttttgtggaggtggatacgtaggt |
265 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||| ||||| | ||||||||||| |||| ||||| || |||||||||||| |||||||| |
|
|
| T |
15674205 |
tgtttgagttaacggagaataagtctatgtctgtggccgacttactctctgttgattcagagcgttggggccggggaggtgtggaggtggagacgtaggt |
15674106 |
T |
|
| Q |
266 |
tgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
||||||||||||||||||| ||| ||| ||||| ||||||||||||||||| |
|
|
| T |
15674105 |
tgtggcagtgggaggaggagttgctagatgagtgcagggctttacttcttga |
15674054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 33630378 - 33630334
Alignment:
| Q |
265 |
ttgtggcagtgggaggaggacttgttagcggagtgtagggcttta |
309 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
33630378 |
ttgtggcagtgggaggaggagatgttagcggagtgtagggcttta |
33630334 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 317
Target Start/End: Complemental strand, 1683299 - 1683269
Alignment:
| Q |
287 |
tgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
1683299 |
tgttagcggagtgtagggctttacttcttga |
1683269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0418 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0418
Description:
Target: scaffold0418; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 133 - 317
Target Start/End: Complemental strand, 8088 - 7904
Alignment:
| Q |
133 |
ttaggggatgttcctttttgtgttcgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagc |
232 |
Q |
| |
|
|||||||||||||| || ||||| ||||| ||||| |||||||||||| |||||||||| | |||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
8088 |
ttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaatagagaataagctcatgtctatggcagacttgttctctgttgatttggagc |
7989 |
T |
|
| Q |
233 |
agtggggggttttgtggaggtggatacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttga |
317 |
Q |
| |
|
|| |||| |||| |||||||||| ||||| |||||||||||||||||||| |||||| |||||||| ||||||||||||||| |
|
|
| T |
7988 |
agcaggggtttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagtggagtgtatggctttacttcttga |
7904 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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