View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5654_1D_low_25 (Length: 313)

Name: NF5654_1D_low_25
Description: NF5654_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5654_1D_low_25
NF5654_1D_low_25
[»] chr4 (40 HSPs)
chr4 (32-236)||(54795878-54796082)
chr4 (42-219)||(52287923-52288102)
chr4 (242-313)||(35999689-35999760)
chr4 (242-313)||(39498828-39498899)
chr4 (242-313)||(39502167-39502238)
chr4 (242-313)||(40435903-40435974)
chr4 (242-313)||(43723267-43723338)
chr4 (242-313)||(47670365-47670436)
chr4 (242-313)||(48879328-48879399)
chr4 (242-313)||(23686790-23686861)
chr4 (242-313)||(27555413-27555484)
chr4 (242-313)||(34049598-34049669)
chr4 (242-313)||(39835308-39835379)
chr4 (242-313)||(45596271-45596342)
chr4 (242-313)||(45747797-45747868)
chr4 (242-313)||(13229990-13230061)
chr4 (242-313)||(18405235-18405306)
chr4 (242-313)||(25932444-25932515)
chr4 (242-313)||(27762900-27762971)
chr4 (245-312)||(27942747-27942814)
chr4 (242-313)||(48518892-48518963)
chr4 (243-313)||(41744222-41744292)
chr4 (245-301)||(34237424-34237480)
chr4 (242-313)||(6279922-6279993)
chr4 (242-313)||(39730294-39730365)
chr4 (242-313)||(41859048-41859119)
chr4 (242-303)||(55968001-55968062)
chr4 (242-313)||(42773951-42774022)
chr4 (246-312)||(10400810-10400876)
chr4 (243-313)||(18931756-18931826)
chr4 (242-300)||(25916036-25916094)
chr4 (253-313)||(8322248-8322308)
chr4 (242-313)||(936129-936200)
chr4 (242-313)||(32953526-32953597)
chr4 (242-313)||(36860121-36860191)
chr4 (242-303)||(30415915-30415976)
chr4 (231-313)||(31937859-31937941)
chr4 (242-313)||(50672909-50672977)
chr4 (277-313)||(37296681-37296717)
chr4 (242-313)||(38414209-38414278)
[»] chr3 (25 HSPs)
chr3 (242-313)||(20297792-20297863)
chr3 (242-313)||(11239121-11239192)
chr3 (242-313)||(28124437-28124508)
chr3 (242-313)||(44952307-44952378)
chr3 (242-313)||(9320449-9320520)
chr3 (242-313)||(24574574-24574645)
chr3 (242-313)||(26849021-26849092)
chr3 (242-313)||(40908264-40908335)
chr3 (242-303)||(43715309-43715370)
chr3 (242-313)||(6231502-6231573)
chr3 (243-313)||(1099197-1099267)
chr3 (244-313)||(48339760-48339829)
chr3 (245-313)||(33217917-33217985)
chr3 (242-313)||(8476309-8476380)
chr3 (242-313)||(31435924-31435995)
chr3 (242-313)||(47114858-47114929)
chr3 (242-313)||(20414466-20414537)
chr3 (242-313)||(43132158-43132229)
chr3 (239-313)||(1246898-1246974)
chr3 (249-313)||(53165733-53165797)
chr3 (242-296)||(45826792-45826846)
chr3 (256-313)||(10822733-10822790)
chr3 (260-313)||(31611004-31611057)
chr3 (242-302)||(2565461-2565521)
chr3 (266-302)||(9320405-9320441)
[»] chr2 (37 HSPs)
chr2 (242-313)||(40950860-40950931)
chr2 (242-313)||(9733847-9733918)
chr2 (242-313)||(346346-346417)
chr2 (242-313)||(34356701-34356772)
chr2 (242-313)||(39995132-39995203)
chr2 (243-313)||(37192521-37192591)
chr2 (242-313)||(2521674-2521745)
chr2 (242-313)||(6171790-6171861)
chr2 (242-313)||(11071604-11071675)
chr2 (242-313)||(21737401-21737472)
chr2 (242-313)||(41750528-41750599)
chr2 (242-313)||(42674662-42674733)
chr2 (245-313)||(638592-638660)
chr2 (246-313)||(5770115-5770182)
chr2 (242-313)||(14777499-14777570)
chr2 (242-313)||(37533951-37534022)
chr2 (243-313)||(2050865-2050935)
chr2 (246-303)||(26310278-26310335)
chr2 (245-313)||(28311701-28311769)
chr2 (242-313)||(4559558-4559629)
chr2 (242-313)||(17965982-17966053)
chr2 (242-313)||(20426484-20426555)
chr2 (242-313)||(41729131-41729202)
chr2 (244-313)||(18713660-18713729)
chr2 (245-313)||(14832809-14832877)
chr2 (245-313)||(37233428-37233496)
chr2 (242-313)||(6571686-6571757)
chr2 (243-302)||(24499450-24499509)
chr2 (242-312)||(45409250-45409320)
chr2 (244-313)||(13760944-13761013)
chr2 (256-313)||(14253521-14253578)
chr2 (242-313)||(1988310-1988381)
chr2 (242-313)||(27357964-27358035)
chr2 (242-313)||(40570019-40570090)
chr2 (242-296)||(7007589-7007643)
chr2 (242-296)||(14403234-14403288)
chr2 (241-313)||(4685178-4685250)
[»] chr1 (37 HSPs)
chr1 (242-313)||(49822918-49822989)
chr1 (233-313)||(6978770-6978851)
chr1 (241-313)||(25789763-25789835)
chr1 (245-313)||(38964683-38964751)
chr1 (242-313)||(9115837-9115908)
chr1 (242-313)||(39930457-39930528)
chr1 (242-313)||(2430496-2430567)
chr1 (242-313)||(3572566-3572637)
chr1 (242-313)||(6911493-6911564)
chr1 (242-305)||(32202332-32202395)
chr1 (242-313)||(35187456-35187527)
chr1 (242-313)||(47037457-47037528)
chr1 (242-304)||(5806292-5806354)
chr1 (243-313)||(9831872-9831942)
chr1 (244-313)||(36361782-36361851)
chr1 (242-313)||(1597343-1597414)
chr1 (242-313)||(2632852-2632923)
chr1 (242-313)||(12190178-12190249)
chr1 (242-313)||(46666708-46666779)
chr1 (243-313)||(32824922-32824992)
chr1 (244-313)||(51445083-51445152)
chr1 (242-313)||(4683375-4683446)
chr1 (242-313)||(5518505-5518576)
chr1 (242-313)||(8332014-8332085)
chr1 (242-313)||(20260087-20260158)
chr1 (242-313)||(39329608-39329679)
chr1 (242-313)||(52630773-52630844)
chr1 (242-313)||(14788723-14788794)
chr1 (242-313)||(48916023-48916094)
chr1 (247-313)||(30241009-30241075)
chr1 (243-313)||(50190767-50190837)
chr1 (244-313)||(31806759-31806828)
chr1 (242-313)||(29091666-29091737)
chr1 (250-313)||(37436630-37436693)
chr1 (242-291)||(1007769-1007818)
chr1 (243-313)||(38519064-38519134)
chr1 (247-303)||(13653861-13653917)
[»] chr7 (39 HSPs)
chr7 (239-313)||(43949244-43949318)
chr7 (242-313)||(11329992-11330063)
chr7 (242-313)||(27213856-27213927)
chr7 (242-313)||(39554182-39554253)
chr7 (242-312)||(38544194-38544264)
chr7 (241-313)||(45265048-45265120)
chr7 (246-313)||(25924642-25924709)
chr7 (242-313)||(27419225-27419296)
chr7 (242-313)||(33378841-33378912)
chr7 (242-313)||(40212888-40212959)
chr7 (242-313)||(48314121-48314192)
chr7 (244-313)||(48341361-48341430)
chr7 (242-313)||(8419590-8419661)
chr7 (242-313)||(27248292-27248363)
chr7 (241-312)||(41632364-41632435)
chr7 (242-313)||(44566044-44566115)
chr7 (242-313)||(45045625-45045696)
chr7 (242-313)||(48160592-48160663)
chr7 (242-303)||(9814219-9814280)
chr7 (236-312)||(34930460-34930537)
chr7 (242-313)||(9946991-9947062)
chr7 (242-313)||(16825355-16825426)
chr7 (242-313)||(25098068-25098139)
chr7 (242-313)||(28904187-28904258)
chr7 (242-313)||(35488190-35488261)
chr7 (243-300)||(44820266-44820323)
chr7 (245-313)||(38396370-38396438)
chr7 (245-313)||(45448941-45449009)
chr7 (242-304)||(31921749-31921810)
chr7 (242-313)||(41684023-41684094)
chr7 (243-313)||(6656226-6656296)
chr7 (242-304)||(45723215-45723277)
chr7 (242-302)||(11000713-11000773)
chr7 (242-313)||(18824144-18824216)
chr7 (242-313)||(25045619-25045689)
chr7 (244-313)||(6656476-6656544)
chr7 (242-287)||(45440933-45440978)
chr7 (243-313)||(37534105-37534175)
chr7 (242-274)||(30685993-30686025)
[»] chr8 (29 HSPs)
chr8 (242-313)||(12710644-12710715)
chr8 (242-313)||(26062143-26062214)
chr8 (242-313)||(38132738-38132809)
chr8 (246-313)||(40197081-40197148)
chr8 (242-313)||(10896218-10896289)
chr8 (242-313)||(18726620-18726691)
chr8 (242-311)||(42755868-42755937)
chr8 (242-313)||(1554355-1554426)
chr8 (242-313)||(25837910-25837981)
chr8 (242-313)||(32660934-32661005)
chr8 (242-313)||(35818425-35818496)
chr8 (242-313)||(37392547-37392618)
chr8 (242-313)||(38364080-38364151)
chr8 (247-313)||(3050008-3050074)
chr8 (244-313)||(26601941-26602010)
chr8 (245-313)||(7931238-7931306)
chr8 (242-313)||(16313508-16313579)
chr8 (246-313)||(18298111-18298178)
chr8 (242-313)||(7317372-7317443)
chr8 (242-313)||(41228715-41228786)
chr8 (245-313)||(29421493-29421561)
chr8 (242-313)||(33444627-33444698)
chr8 (243-313)||(21137134-21137204)
chr8 (243-292)||(5020492-5020541)
chr8 (242-307)||(34672339-34672404)
chr8 (243-283)||(31117546-31117586)
chr8 (243-274)||(8635672-8635703)
chr8 (246-313)||(35394389-35394456)
chr8 (246-313)||(43871971-43872038)
[»] chr6 (9 HSPs)
chr6 (242-313)||(8029332-8029403)
chr6 (244-313)||(18897920-18897989)
chr6 (242-313)||(7053571-7053642)
chr6 (242-313)||(1317017-1317088)
chr6 (242-313)||(2657699-2657770)
chr6 (242-313)||(14171012-14171083)
chr6 (242-313)||(6705766-6705837)
chr6 (248-313)||(16968924-16968989)
chr6 (242-274)||(10246223-10246255)
[»] scaffold0006 (2 HSPs)
scaffold0006 (242-313)||(201924-201995)
scaffold0006 (247-303)||(143622-143678)
[»] chr5 (21 HSPs)
chr5 (242-313)||(555707-555778)
chr5 (242-313)||(4765561-4765632)
chr5 (242-313)||(12970531-12970602)
chr5 (242-313)||(14206822-14206893)
chr5 (242-313)||(19065506-19065577)
chr5 (242-313)||(36703873-36703944)
chr5 (245-313)||(6091714-6091782)
chr5 (242-313)||(22935913-22935984)
chr5 (242-313)||(27481356-27481427)
chr5 (242-313)||(28602554-28602625)
chr5 (243-313)||(32535936-32536006)
chr5 (242-313)||(18412208-18412279)
chr5 (244-313)||(11855658-11855727)
chr5 (242-313)||(29543016-29543087)
chr5 (242-313)||(42012180-42012251)
chr5 (247-313)||(8406893-8406959)
chr5 (241-302)||(6930654-6930715)
chr5 (243-303)||(26637045-26637105)
chr5 (262-313)||(8646412-8646463)
chr5 (243-292)||(20962610-20962659)
chr5 (241-313)||(15200546-15200618)
[»] scaffold0189 (1 HSPs)
scaffold0189 (246-313)||(28957-29024)
[»] scaffold0702 (1 HSPs)
scaffold0702 (242-313)||(3566-3637)
[»] scaffold0662 (1 HSPs)
scaffold0662 (242-313)||(4467-4538)


Alignment Details
Target: chr4 (Bit Score: 176; Significance: 8e-95; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 32 - 236
Target Start/End: Original strand, 54795878 - 54796082
Alignment:
Q  32 tgagctgttttatctattgtggattattaatattttgactgtcagttctaccattacagtcagaatgaactaatgatgaaacggttactggttatcgcat 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  54795878 tgagctgttttatctattgtggattattaatattttgactgtcagttctaccattccagtcagaatgaactaatgatgaaacggttattggttatcgcat 54795977  T
Q  132 atattcgtcgtttattttatgccaannnnnnnacatgtatgccaatgtttgctttttatactttacaaatggatccaaaatgaggggtggtacgctttac 231  Q
    |||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54795978 atattcgtcgtttattttatgccaattcttttacatgtatgccaatgtttgctttttatactttacaaatggatccaaaatgaggggtggtacgctttac 54796077  T
Q  232 aagat 236  Q
    |||||    
T  54796078 aagat 54796082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 42 - 219
Target Start/End: Original strand, 52287923 - 52288102
Alignment:
Q  42 tatctattgtggattattaatattttgactgt--cagttctaccattacagtcagaatgaactaatgatgaaacggttactggttatcgcatatattcgt 139  Q
    |||||||||||||||||||||||||||||| |  ||||||||  ||| ||||| |||  || | |||||||||||||| ||||||||||||||||||||     
T  52287923 tatctattgtggattattaatattttgactatttcagttctaatattccagtctgaactaa-tgatgatgaaacggttgctggttatcgcatatattcgg 52288021  T
Q  140 c-gtttattttatgccaannnnnnnacatgtatgccaatgtttgctttttatactttacaaatggatccaaaatgaggggt 219  Q
      |||||||||||||||        |||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  52288022 atgtttattttatgccattttttttacatgtatgccaatgtttgctaattatactttacaaatggatccaaaatgaggggt 52288102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 35999760 - 35999689
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  35999760 ggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatgtttg 35999689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 39498899 - 39498828
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  39498899 ggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatgtttatgtttg 39498828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 39502238 - 39502167
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  39502238 ggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatgtttatgtttg 39502167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 40435974 - 40435903
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  40435974 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 40435903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 43723338 - 43723267
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  43723338 ggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatgcctatgtttg 43723267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 47670436 - 47670365
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  47670436 ggtgtgtttgtttcaagttataattgttgattcctggaaataaaatgatagaaatgtatatgcctatgtttg 47670365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 48879399 - 48879328
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  48879399 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 48879328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 23686861 - 23686790
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||||    
T  23686861 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatgtttg 23686790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 27555484 - 27555413
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||  ||||||||    
T  27555484 ggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataggaatgtatatgtctatgtttg 27555413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 34049598 - 34049669
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||  ||||||||    
T  34049598 ggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgtctatgtttg 34049669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 39835308 - 39835379
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| ||||||||    
T  39835308 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcatatgtttg 39835379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 45596342 - 45596271
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  45596342 ggtgcgtttgtttcaagttataattgttgattttcgggaataaaatgatagaaatgtatatgcctatgtttg 45596271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 45747797 - 45747868
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  45747797 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 45747868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 13229990 - 13230061
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||| || |||| ||| ||||||||||||||||||||||||| ||||||||    
T  13229990 ggtgtgtttgtttcaagttataattttttattcccgggaataaaatgatagaaatgtatatgcctatgtttg 13230061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 18405235 - 18405306
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||| ||||||||    
T  18405235 ggtgtgtttgtttcaagttataattgttgattcccgagaataaaattatagaaatgtatatgcctatgtttg 18405306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 25932515 - 25932444
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||| ||||||||    
T  25932515 ggtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatgtttg 25932444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 27762900 - 27762971
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||    
T  27762900 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttg 27762971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 27942814 - 27942747
Alignment:
Q  245 gtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgttt 312  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||  |||||||    
T  27942814 gtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgtctatgttt 27942747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 48518892 - 48518963
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  48518892 ggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 48518963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 41744222 - 41744292
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||| ||||||||||||||||||||||  ||| ||||||||||||||||||||||||| ||||||||    
T  41744222 gtgtgtttatttcaagttataattgttgatttccgggaataaaatgatagaaatgtatatgcctatgtttg 41744292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 34237424 - 34237480
Alignment:
Q  245 gtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtata 301  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  34237424 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtata 34237480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 6279922 - 6279993
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||  ||||||||||  ||||||||    
T  6279922 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatatgaatgtatatgtctatgtttg 6279993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 39730294 - 39730365
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||  ||||||||    
T  39730294 ggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtatatgtctatgtttg 39730365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 41859048 - 41859119
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||| | ||||||||||| ||||||||    
T  41859048 ggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatgtttg 41859119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 55968001 - 55968062
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatg 303  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||    
T  55968001 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 55968062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 42774022 - 42773951
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||   || ||||||||||| | ||||||||||| ||||||||    
T  42774022 ggtgtgtttgtttcaagttataattgttgatttctgggaataaaatgattggaatgtatatgcctatgtttg 42773951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 10400810 - 10400876
Alignment:
Q  246 tgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgttt 312  Q
    |||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||  |||||||    
T  10400810 tgtttgtttcaagttatatttgttgatttttgggaataaaatgatagaaatgtatatgtctatgttt 10400876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 18931826 - 18931756
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||   || ||||||||||||| ||||||||||  ||||||||    
T  18931826 gtgtgtttgtttcaagttataattgttgatttctgggaataaaatgataggaatgtatatgtctatgtttg 18931756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 25916036 - 25916094
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtat 300  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||||||| |||||||    
T  25916036 ggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtat 25916094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 8322308 - 8322248
Alignment:
Q  253 ttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||  || ||||||||||||||||||||||||  ||||||||    
T  8322308 ttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgtctatgtttg 8322248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 936200 - 936129
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||| | ||| ||||| | ||||||||    
T  936200 ggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgattggaatatatatccctatgtttg 936129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 32953597 - 32953526
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||| ||||||||||||||||||||| | | || |||||||||| ||||||||||| ||| ||||    
T  32953597 ggtgtgtttgtctcaagttataattgttgattcccaggaacaaaatgataggaatgtatatgcctatctttg 32953526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 36860191 - 36860121
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||| ||||||||| ||  ||||||||||||| |||| |||||| |||||||||    
T  36860191 ggtgtgtttgtttcaagttatatttgttgatt-tcttaaataaaatgatataaatatatatgtttatgtttg 36860121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 30415976 - 30415915
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatg 303  Q
    |||||||||||||||||||||| |||||||||| ||  ||||||||||||| ||| ||||||    
T  30415976 ggtgtgtttgtttcaagttatatttgttgattcccgataataaaatgataggaatatatatg 30415915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 31937859 - 31937941
Alignment:
Q  231 caagatttttaggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||  ||||||||||||||||||||||||||| |||| | | ||||||||| ||| |||  || |||| ||||||||    
T  31937859 caagattttatggtgtgtttgtttcaagttataattgtagatttttgaaaataaaatcataaaaacatacatgcatatgtttg 31937941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 50672909 - 50672977
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||| ||||||  ||||||||||| ||| ||||||||||||| ||||||||||  ||||||||    
T  50672909 ggtgtgtttgttttaagtta--attgttgattc-cgggaataaaatgataggaatgtatatgtctatgtttg 50672977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 37296717 - 37296681
Alignment:
Q  277 ggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||| || |||||||||||||    
T  37296717 ggaaataaaatgatagaaatatacatgcttatgtttg 37296681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 38414278 - 38414209
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||| | |||||||| ||||||||  |||| ||||||||||||||||| || |||  ||||||||    
T  38414278 ggtgtgtttgtctaaagttatatttgttgat--tcgggaataaaatgatagaaatatacatgtctatgtttg 38414209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 6e-28; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 20297863 - 20297792
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  20297863 ggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatgcctatgtttg 20297792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 11239121 - 11239192
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  11239121 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 11239192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 28124437 - 28124508
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  28124437 ggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataggaatgtatatgcctatgtttg 28124508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 44952378 - 44952307
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  44952378 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 44952307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 9320449 - 9320520
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||||||||    
T  9320449 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatacttatgtttg 9320520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 24574645 - 24574574
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  24574645 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 24574574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 26849092 - 26849021
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  26849092 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 26849021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 40908335 - 40908264
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  40908335 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 40908264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 43715309 - 43715370
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatg 303  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  43715309 ggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatg 43715370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 6231502 - 6231573
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||||| ||||||||||| ||||||||    
T  6231502 ggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatgcctatgtttg 6231573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 1099267 - 1099197
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| | ||||||||    
T  1099267 gtgtgtttgttttaagttataattgttgattcccgggaataaaatgatagaaatgtatatccctatgtttg 1099197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 48339760 - 48339829
Alignment:
Q  244 tgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||  ||| |||||||||||| |||||||||||| ||||||||    
T  48339760 tgtgtttgtttcaagttataattgttgatttccgggaataaaatgatataaatgtatatgcctatgtttg 48339829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 33217917 - 33217985
Alignment:
Q  245 gtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||| ||||||||||| ||||||||    
T  33217917 gtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatgtttg 33217985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 8476309 - 8476380
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||| | ||||||    
T  8476309 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctgtgtttg 8476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 31435924 - 31435995
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||| ||||||||||  |  ||||||||||||||||||||||||| ||||||||    
T  31435924 ggtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgatagaaatgtatatgcctatgtttg 31435995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 47114858 - 47114929
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||| | ||||||||||| ||||||||    
T  47114858 ggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgcctatgtttg 47114929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 20414466 - 20414537
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||   || ||||||||||| | ||||||||||| ||||||||    
T  20414466 ggtgtgtttgtttcaagttataattgttgatttctgggaataaaatgattggaatgtatatgcctatgtttg 20414537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 43132158 - 43132229
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||| |||||||||||||  |||||||| |||| ||| ||||||| ||||||||    
T  43132158 ggtgtgtttgtttcaagttatatttgttgattctcgagaataaaataataggaatatatatgcctatgtttg 43132229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 313
Target Start/End: Original strand, 1246898 - 1246974
Alignment:
Q  239 ttaggtgtgtttg--tttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||  ||| ||| |||| |||||||||||||| |||||||||||||||||  |||||||||||||||    
T  1246898 ttaggtgtgtttgcgtttgaagctatatttgttgattctcgggaataaaatgatagaaatacatatgcttatgtttg 1246974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 53165733 - 53165797
Alignment:
Q  249 ttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||| |||||||||| |  |||||||||||||| ||| ||||||||||||||||    
T  53165733 ttgtttcaagttatatttgttgattcccataaataaaatgataggaatatatatgcttatgtttg 53165797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 45826846 - 45826792
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaat 296  Q
    |||||||||||||||||||||  |||| |||||  || |||||||||||||||||    
T  45826846 ggtgtgtttgtttcaagttatcgttgtagattccagggaataaaatgatagaaat 45826792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 10822733 - 10822790
Alignment:
Q  256 aagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||| |||||||||  ||| ||||||||||||||| ||||||||  ||||||||    
T  10822733 aagttatatttgttgatttccgggaataaaatgatagaagtgtatatgtctatgtttg 10822790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 313
Target Start/End: Original strand, 31611004 - 31611057
Alignment:
Q  260 tataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||| ||| ||||||||||| | ||||||||||  ||||||||    
T  31611004 tataattgttgattcccgggaataaaatgattggaatgtatatgtctatgtttg 31611057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 302
Target Start/End: Original strand, 2565461 - 2565521
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatat 302  Q
    |||||||| |||| |||||||| |||||||||||  | |||||||| |||||||| |||||    
T  2565461 ggtgtgttcgttttaagttatatttgttgattcttaggaataaaataatagaaatatatat 2565521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 302
Target Start/End: Original strand, 9320405 - 9320441
Alignment:
Q  266 tgttgattctcggaaataaaatgatagaaatgtatat 302  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  9320405 tgttgattctcgggaataaaatgataggaatgtatat 9320441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 6e-28; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 40950860 - 40950931
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  40950860 ggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatatatatgcttatgtttg 40950931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 9733847 - 9733918
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  9733847 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 9733918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 346346 - 346417
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  346346 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 346417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 34356701 - 34356772
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||    
T  34356701 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatgtttg 34356772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 39995132 - 39995203
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  39995132 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 39995203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 37192591 - 37192521
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||    
T  37192591 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatgtttg 37192521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 2521745 - 2521674
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||||||| ||||||||    
T  2521745 ggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgattggaatgtatatgcctatgtttg 2521674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 6171861 - 6171790
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||||| ||||||||||| ||||||||    
T  6171861 ggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatgcctatgtttg 6171790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 11071675 - 11071604
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||||| ||||||||||| ||||||||    
T  11071675 ggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatgtttg 11071604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 21737401 - 21737472
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||  ||||||||    
T  21737401 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatgtttg 21737472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 41750599 - 41750528
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||| ||||||||    
T  41750599 ggtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatgtttg 41750528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 42674662 - 42674733
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||    
T  42674662 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttg 42674733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 638660 - 638592
Alignment:
Q  245 gtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||  ||||||||    
T  638660 gtgtttgtttcaagttataattgttgatttccggaaataaaatgataggaatgtatatgtctatgtttg 638592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 5770115 - 5770182
Alignment:
Q  246 tgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||  || ||||||||||||| ||||||||||| ||||||||    
T  5770115 tgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgcctatgtttg 5770182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 14777499 - 14777570
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||| |||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||    
T  14777499 ggtgtgtttgtttcaatttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttg 14777570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 37534022 - 37533951
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||||| ||||||||||  ||||||||    
T  37534022 ggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgtctatgtttg 37533951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 2050935 - 2050865
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||| ||||||||| | ||||||||    
T  2050935 gtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatacctatgtttg 2050865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 26310335 - 26310278
Alignment:
Q  246 tgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatg 303  Q
    ||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  26310335 tgtttgtttaaagttataattgttgattcccgggaataaaatgatagaaatgtatatg 26310278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 28311701 - 28311769
Alignment:
Q  245 gtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||| |||||||||| ||| ||||||||||||| ||| ||||||| ||||||||    
T  28311701 gtgtttgtttcaagttatatttgttgattcccgggaataaaatgataggaatatatatgcctatgtttg 28311769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 4559629 - 4559558
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| |   ||||||||||| | ||||||||||| ||||||||    
T  4559629 ggtgtgtttgtttcaagttataattgttgattcccaagaataaaatgattggaatgtatatgcctatgtttg 4559558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 17966053 - 17965982
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||| | ||||||||||  ||||||||    
T  17966053 ggtgtgtttgtttcaagttataattgttgattcccgataataaaatgattggaatgtatatgtctatgtttg 17965982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 20426484 - 20426555
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||| ||||| |||||||||| ||| ||||||||||||| ||| ||||||| ||||||||    
T  20426484 ggtgtgtttgtttcaaattatatttgttgattcccgggaataaaatgataggaatttatatgcctatgtttg 20426555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 41729131 - 41729202
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||| || |||| ||| ||||||||||||| |||| |||||| ||||||||    
T  41729131 ggtgtgtttgtttcaagttataattttttattcccgggaataaaatgataggaatggatatgcctatgtttg 41729202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 18713660 - 18713729
Alignment:
Q  244 tgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||| ||||||||||  || |||||||||||| |||| ||||||| ||||||||    
T  18713660 tgtgtttgtttcaagttatatttgttgattcatggtaataaaatgatataaatatatatgcctatgtttg 18713729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 14832877 - 14832809
Alignment:
Q  245 gtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||| ||||||||||   | ||||||||||||||||| ||||||| ||||||||    
T  14832877 gtgtttgtttcaagttatatttgttgattcctaggaataaaatgatagaaatatatatgcctatgtttg 14832809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 37233496 - 37233428
Alignment:
Q  245 gtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||| |||||||||| ||| ||||||||||||| ||  ||||||| ||||||||    
T  37233496 gtgtttgtttcaagttatatttgttgattcccgggaataaaatgataggaacatatatgcctatgtttg 37233428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 6571757 - 6571686
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||| ||||||| |||||||| |||||||||  ||||||||||||||||| ||| ||||||| ||||||||    
T  6571757 ggtgtatttgtttaaagttatatttgttgatttccggaaataaaatgataggaatatatatgcctatgtttg 6571686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 302
Target Start/End: Complemental strand, 24499509 - 24499450
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatat 302  Q
    ||||||||||||||||||||| ||||||||||   ||||||||||||||||||| |||||    
T  24499509 gtgtgtttgtttcaagttatatttgttgattcatagaaataaaatgatagaaatatatat 24499450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 45409320 - 45409250
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgttt 312  Q
    |||||||||||||||||||||| |||||||||| |    |||||||||||| ||||||||||| |||||||    
T  45409320 ggtgtgtttgtttcaagttatatttgttgattcccaagtataaaatgataggaatgtatatgcctatgttt 45409250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 13761013 - 13760944
Alignment:
Q  244 tgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||| ||| ||| | | ||||||||    
T  13761013 tgtgtttgtttcaagttataattattgattttcgggaataaaatgataggaatatatgtacctatgtttg 13760944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 313
Target Start/End: Complemental strand, 14253578 - 14253521
Alignment:
Q  256 aagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||||  ||||||||    
T  14253578 aagttatatttgttgattctcgggaataaaatgatagaaatatatatgtctatgtttg 14253521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 1988381 - 1988310
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||| |||||||| |||||||||   || ||||||||||||||||| || |||| ||||||||    
T  1988381 ggtgtgtttgtttgaagttatatttgttgatttctgggaataaaatgatagaaatatacatgcctatgtttg 1988310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 27357964 - 27358035
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||| |||||||||| | |  ||||||||||||  |||||||||  ||||||||    
T  27357964 ggtgtgtttgtttcaagttatatttgttgattcccaggtataaaatgatagggatgtatatgtctatgtttg 27358035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 40570090 - 40570019
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||| |||||  || |||||||| ||| |||  || |||| ||||||||    
T  40570090 ggtgtgtttgtttcaagttataattgtagattcctgggaataaaatcataaaaacatacatgcctatgtttg 40570019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 7007643 - 7007589
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaat 296  Q
    ||||||||| |||||||||||| ||||||||||| ||  |||||||||| |||||    
T  7007643 ggtgtgtttatttcaagttatatttgttgattcttggggataaaatgatggaaat 7007589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 14403234 - 14403288
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaat 296  Q
    ||||||||||||| ||||| || ||||||||||  ||||||||||||||| ||||    
T  14403234 ggtgtgtttgtttgaagttgtatttgttgattcctggaaataaaatgataaaaat 14403288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 4685250 - 4685178
Alignment:
Q  241 aggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||| ||| | |   ||| | |||||||||||||||||||| || ||| |||||||||    
T  4685250 aggtgtgtttgtttcaagtgatattcgcatatttttggaaataaaatgatagaaatatacatgtttatgtttg 4685178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 49822918 - 49822989
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  49822918 ggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatgtttg 49822989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 6978851 - 6978770
Alignment:
Q  233 agatttttagg-tgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  6978851 agatttttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 6978770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 25789835 - 25789763
Alignment:
Q  241 aggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  25789835 aggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 25789763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 38964683 - 38964751
Alignment:
Q  245 gtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  38964683 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcttatgtttg 38964751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 9115908 - 9115837
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  9115908 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 9115837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 39930528 - 39930457
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  39930528 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 39930457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 2430567 - 2430496
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  2430567 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 2430496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 3572566 - 3572637
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  3572566 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 3572637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 6911564 - 6911493
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||| ||||||||    
T  6911564 ggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataagaatgtatatgcctatgtttg 6911493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 32202332 - 32202395
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgct 305  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  32202332 ggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatgct 32202395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 35187527 - 35187456
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  35187527 ggtgtgtttttttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtttatgtttg 35187456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 47037528 - 47037457
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||||    
T  47037528 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatgtttg 47037457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 5806292 - 5806354
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgc 304  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  5806292 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgc 5806354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 9831872 - 9831942
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| ||||||||    
T  9831872 gtgtgtttgtttcaagttataattgttgattcccaggaataaaatgatagaaatgtatatgcctatgtttg 9831942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 36361851 - 36361782
Alignment:
Q  244 tgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  36361851 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 36361782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 1597343 - 1597414
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||||| ||||||||||| ||||||||    
T  1597343 ggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatgtttg 1597414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 2632923 - 2632852
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||| |||| ||||||||||| ||||||||    
T  2632923 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaataataggaatgtatatgcctatgtttg 2632852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 12190178 - 12190249
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||| ||||||||    
T  12190178 ggtgtgtttgtttcaagttataattgttgattttcgggaataaaatgataggaatgtacatgcctatgtttg 12190249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 46666779 - 46666708
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||    
T  46666779 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttg 46666708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 32824992 - 32824922
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||  |||||||||||| |||| ||||||||||| ||||||||    
T  32824992 gtgtgtttgtttcaagttataattgttgatttccggaaataaaataataggaatgtatatgcctatgtttg 32824922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 51445083 - 51445152
Alignment:
Q  244 tgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| | ||||||||    
T  51445083 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatacctatgtttg 51445152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 4683375 - 4683446
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||| |||||||||| |||||||||||||||| | ||||||||||||||| ||||||||||| ||||||||    
T  4683375 ggtgtctttgtttcaatttataattgttgattcccagaaataaaatgataggaatgtatatgcctatgtttg 4683446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 5518505 - 5518576
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||| |||||||||| | | ||||||||||||||||| ||||||| ||||||||    
T  5518505 ggtgtgtttgtttcaagttatatttgttgattcccaggaataaaatgatagaaatatatatgcctatgtttg 5518576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 8332085 - 8332014
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||| | ||||||||||| ||||||||    
T  8332085 ggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatgtttg 8332014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 20260087 - 20260158
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||| | ||||||||||| ||||||||    
T  20260087 ggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgcctatgtttg 20260158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 39329679 - 39329608
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||  ||||||||    
T  39329679 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgtctatgtttg 39329608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 52630844 - 52630773
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||||| ||||||||||  ||||||||    
T  52630844 ggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgtctatgtttg 52630773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 14788794 - 14788723
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||||| |||| ||||||||||  ||||||||    
T  14788794 ggtgtgtttgtttcaagttataatttttgattcccgggaataaaataataggaatgtatatgtctatgtttg 14788723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 48916023 - 48916094
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||| |||||||||||| ||||||||||  |  ||||||||||||||||||||||||| ||||||||    
T  48916023 ggtgtgtttatttcaagttatatttgttgattccagagaataaaatgatagaaatgtatatgcctatgtttg 48916094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 30241075 - 30241009
Alignment:
Q  247 gtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||| ||||||||| | || ||||||||||||||||| ||||||| ||||||||    
T  30241075 gtttgtttcaagttatatttgttgatttttggtaataaaatgatagaaatatatatgcctatgtttg 30241009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 50190767 - 50190837
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||| |||||||||| |||  ||||||||||||| ||| ||||||||||| || |||||    
T  50190767 gtgtgtttgtttcaagatataattgttaatttccggaaataaaatgctaggaatgtatatgcctacgtttg 50190837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 31806759 - 31806828
Alignment:
Q  244 tgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||| |||| |||||  |  ||||||||||||||||| || |||||||||||||    
T  31806759 tgtgtttgtttcaagttatatttgtagattcctgagaataaaatgatagaaatatacatgcttatgtttg 31806828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 29091737 - 29091666
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||| ||||||||||  |  |||||||||||| |||| ||||||  ||||||||    
T  29091737 ggtgtgtttgtttcaagttatatttgttgattcctgataataaaatgataaaaatatatatgtctatgtttg 29091666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 37436630 - 37436693
Alignment:
Q  250 tgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||| |||||| |||||||||| ||  ||||||||||||| ||||||||||| ||||||||    
T  37436630 tgtttcatgttatatttgttgattcacgagaataaaatgataggaatgtatatgcatatgtttg 37436693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 1007818 - 1007769
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgata 291  Q
    |||||||||||||||||||||| |||||||||| ||  ||||||||||||    
T  1007818 ggtgtgtttgtttcaagttatatttgttgattcccgagaataaaatgata 1007769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 38519064 - 38519134
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||| |||| |||| | |||||||||   ||||||||  | |||||||||||||    
T  38519064 gtgtgtttgtttcaagttatatttgtagatttttggaaataaatcaatagaaatacagatgcttatgtttg 38519134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 303
Target Start/End: Complemental strand, 13653917 - 13653861
Alignment:
Q  247 gtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatg 303  Q
    ||||||||||||||| | ||||||||||  |  ||||||||||||||||| ||||||    
T  13653917 gtttgtttcaagttaaatttgttgattcctgagaataaaatgatagaaatatatatg 13653861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 239 - 313
Target Start/End: Complemental strand, 43949318 - 43949244
Alignment:
Q  239 ttaggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  43949318 ttaggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 43949244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 11330063 - 11329992
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  11330063 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 11329992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 27213856 - 27213927
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  27213856 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 27213927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 39554253 - 39554182
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  39554253 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 39554182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 38544264 - 38544194
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgttt 312  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  38544264 ggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgcctatgttt 38544194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 45265048 - 45265120
Alignment:
Q  241 aggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||| ||||||||    
T  45265048 aggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgattggaatgtatatgcctatgtttg 45265120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 25924642 - 25924709
Alignment:
Q  246 tgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  25924642 tgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 25924709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 27419225 - 27419296
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||| ||||||||    
T  27419225 ggtgtgtttgtttcaagttataattgctgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 27419296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 33378912 - 33378841
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  33378912 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 33378841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 40212959 - 40212888
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  40212959 ggtgtgtttgtttcaagttataattgttgattcgcgggaataaaatgataggaatgtatatgcctatgtttg 40212888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 48314192 - 48314121
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  48314192 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 48314121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 48341430 - 48341361
Alignment:
Q  244 tgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  48341430 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 48341361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 8419590 - 8419661
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||    
T  8419590 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttg 8419661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 27248363 - 27248292
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||    
T  27248363 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttg 27248292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 41632364 - 41632435
Alignment:
Q  241 aggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgttt 312  Q
    ||||||||||||||||||||||||||||||||||  |  ||||||||||||||||||||||||| |||||||    
T  41632364 aggtgtgtttgtttcaagttataattgttgattcctgagaataaaatgatagaaatgtatatgcctatgttt 41632435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 44566115 - 44566044
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||  ||||||||    
T  44566115 ggtgtgtttgtttcaagttataattgttgatttccggaaataaaatgataggaatgtatatgtctatgtttg 44566044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 45045696 - 45045625
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  45045696 ggtgtgtttgttttaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 45045625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 48160592 - 48160663
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||  ||||||||    
T  48160592 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatgtttg 48160663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 9814219 - 9814280
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatg 303  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  9814219 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatg 9814280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 34930460 - 34930537
Alignment:
Q  236 tttttaggtgtgtttgtttcaa-gttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgttt 312  Q
    |||| ||||||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||| |||||||    
T  34930460 ttttaaggtgtgtttgtttcaaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatgttt 34930537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 9946991 - 9947062
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||| ||||||||||| ||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  9946991 ggtgtgtttgtttaaagttataatttttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 9947062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 16825355 - 16825426
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||| ||||   | ||||||||||||||||||||||||| ||||||||    
T  16825355 ggtgtgtttgtttcaagttataattgttaattcctaggaataaaatgatagaaatgtatatgcctatgtttg 16825426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 25098139 - 25098068
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||| |||||| |||| ||||||||||||| |||||||||||  |||||||    
T  25098139 ggtgtgtttgtttcaagttataatttttgattttcgggaataaaatgataggaatgtatatgcccatgtttg 25098068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 28904187 - 28904258
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||  ||||||||    
T  28904187 ggtgtgtttgttttaagttataattgttgattcccgagaataaaatgatagaaatgtatatgtctatgtttg 28904258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 35488190 - 35488261
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||| | ||||||||||| ||||||||    
T  35488190 ggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatgtttg 35488261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 44820323 - 44820266
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtat 300  Q
    ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  44820323 gtgtgtttgtttcaagttataattgttgattttcaggaataaaatgatagaaatgtat 44820266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 38396370 - 38396438
Alignment:
Q  245 gtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||||| ||||||||||  ||||||||    
T  38396370 gtgtttgttccaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatgtttg 38396438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 45449009 - 45448941
Alignment:
Q  245 gtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| |||  ||||||||    
T  45449009 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtagatgtctatgtttg 45448941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 31921749 - 31921810
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgc 304  Q
    |||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||||    
T  31921749 ggtgtgtttgtttcaagttatatttgttcatt-tcggaaataaaatgatagaaatatatatgc 31921810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 41684023 - 41684094
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||| ||||||||||  |  ||||| ||||||||||| |||||| |||||||||    
T  41684023 ggtgtgtttgtttcaagttatatttgttgattcctgagaataatatgatagaaatatatatgtttatgtttg 41684094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 6656226 - 6656296
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||| ||||||||| | |||||||||||||||  ||| ||||| | ||||||||    
T  6656226 gtgtgtttgtttcaagttatatttgttgatttttggaaataaaatgatatgaatatatatacctatgtttg 6656296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 45723277 - 45723215
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgc 304  Q
    |||||||||||||||||||||| |||||||||| ||  ||||||||||||| ||| |||||||    
T  45723277 ggtgtgtttgtttcaagttatatttgttgattcccgagaataaaatgataggaatatatatgc 45723215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 302
Target Start/End: Complemental strand, 11000773 - 11000713
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatat 302  Q
    ||||||||||||||||||||||  |||||||||  ||||||||||||||| |||| |||||    
T  11000773 ggtgtgtttgtttcaagttatatatgttgattcctggaaataaaatgatataaatatatat 11000713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 18824216 - 18824144
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatag-aaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||| || ||||||||| | || ||||||||||||| |||| ||||||| ||||||||    
T  18824216 ggtgtgtttgtttcaagttgtatttgttgatttttgggaataaaatgatagaaaatatatatgcctatgtttg 18824144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 25045619 - 25045689
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||| ||||||||||| ||  |||||| ||||| ||| ||||||| ||||||||    
T  25045619 ggtgtgtttgtttcaagttatatttgttgattct-ggggataaaaagataggaatatatatgcatatgtttg 25045689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 6656476 - 6656544
Alignment:
Q  244 tgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||| ||||||||| | |||||| ||||||||  ||| ||||||| ||||||||    
T  6656476 tgtgtttgtttcaagttatatttgttgatttttggaaat-aaatgatatgaatatatatgcctatgtttg 6656544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 287
Target Start/End: Complemental strand, 45440978 - 45440933
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaat 287  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||    
T  45440978 ggtgtgtttgtttcaagttataattgtagattcttgggaataaaat 45440933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 37534105 - 37534175
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||| ||||||||||| |||||  ||||||||||| ||| |||  || |||| ||||||||    
T  37534105 gtgtgtttgtttcatgttataattgtagattcctggaaataaaatcataaaaacatacatgcatatgtttg 37534175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 274
Target Start/End: Original strand, 30685993 - 30686025
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattc 274  Q
    ||||||||||||||||||||||||||| |||||    
T  30685993 ggtgtgtttgtttcaagttataattgtagattc 30686025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 12710715 - 12710644
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  12710715 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 12710644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 26062214 - 26062143
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  26062214 ggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatattcctatgtttg 26062143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 38132738 - 38132809
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||    
T  38132738 ggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgtctatgtttg 38132809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 40197081 - 40197148
Alignment:
Q  246 tgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  40197081 tgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatgtttatgtttg 40197148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 10896218 - 10896289
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| ||||||||    
T  10896218 ggtgtgtttgtttcaagttataattgttgattcccaggaataaaatgatagaaatgtatatgcctatgtttg 10896289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 18726620 - 18726691
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  18726620 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 18726691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 311
Target Start/End: Complemental strand, 42755937 - 42755868
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtt 311  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||| ||||||    
T  42755937 ggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatgtt 42755868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 1554355 - 1554426
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||  ||||||||    
T  1554355 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatgtttg 1554426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 25837981 - 25837910
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| |||| ||||||||    
T  25837981 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtacatgcctatgtttg 25837910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 32660934 - 32661005
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||||| ||||||||||| ||||||||    
T  32660934 ggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgcctatgtttg 32661005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 35818425 - 35818496
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||    
T  35818425 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttg 35818496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 37392547 - 37392618
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  37392547 ggtgtatttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 37392618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 38364151 - 38364080
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||    
T  38364151 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttg 38364080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 3050074 - 3050008
Alignment:
Q  247 gtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  3050074 gtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 3050008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 26601941 - 26602010
Alignment:
Q  244 tgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  26601941 tgtgtttgtttcaaattataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 26602010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 7931306 - 7931238
Alignment:
Q  245 gtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||  ||||||||    
T  7931306 gtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgtatatgtttg 7931238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 16313508 - 16313579
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||||| ||||||||| | ||||||||    
T  16313508 ggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatacctatgtttg 16313579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 18298178 - 18298111
Alignment:
Q  246 tgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| | ||||||||    
T  18298178 tgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtatatacctatgtttg 18298111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 7317443 - 7317372
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||| ||||||||| ||  |||||||||||||| ||| ||||||| ||||||||    
T  7317443 ggtgtgtttgtttcaagttatatttgttgattttcaaaaataaaatgataggaatatatatgcctatgtttg 7317372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 41228715 - 41228786
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||| |||| ||| ||||||||| ||| ||||||||||| || |||||    
T  41228715 ggtgtgtttgtttcaagttataattgttaattcccgggaataaaatggtaggaatgtatatgcctacgtttg 41228786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 29421493 - 29421561
Alignment:
Q  245 gtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||| ||||| ||||||||||  |  ||||||||||||||||| |||||| |||||||||    
T  29421493 gtgtttgtttcaaattatatttgttgattcatgagaataaaatgatagaaatatatatgtttatgtttg 29421561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 33444627 - 33444698
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||| ||||||||||  |  |||||||||||| |||| ||||||  ||||||||    
T  33444627 ggtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgataaaaatatatatgtctatgtttg 33444698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 21137134 - 21137204
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||| |||||||| ||||||||||  |  |||||||| |||||||| ||||||| ||||||||    
T  21137134 gtgtgtttgtttgaagttatatttgttgattcctgagaataaaataatagaaatatatatgcctatgtttg 21137204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 5020492 - 5020541
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatag 292  Q
    ||||||||||||||||||||| ||||||||||  || |||||||||||||    
T  5020492 gtgtgtttgtttcaagttatatttgttgattcatgggaataaaatgatag 5020541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 34672404 - 34672339
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgctta 307  Q
    ||||||||||||| ||||| || ||||||||||  | ||||||||||||| |||| ||||||||||    
T  34672404 ggtgtgtttgtttgaagttgtatttgttgattcctgaaaataaaatgataaaaatatatatgctta 34672339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 31117546 - 31117586
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaata 283  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  31117546 gtgtgtttgtttcaagttatatttgttgattctcagaaata 31117586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 274
Target Start/End: Complemental strand, 8635703 - 8635672
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattc 274  Q
    ||||||||||||||||||||||||||||||||    
T  8635703 gtgtgtttgtttcaagttataattgttgattc 8635672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 35394456 - 35394389
Alignment:
Q  246 tgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||| || ||||||| ||  |||||||||| |||||| ||||||  ||||||||    
T  35394456 tgtttgtttcaagttatatttattgattcacgagaataaaatgaaagaaatatatatgtctatgtttg 35394389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 43871971 - 43872038
Alignment:
Q  246 tgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||| | |||||| ||||||||||| ||| |||  || |||| ||||||||    
T  43871971 tgtttgtttcaagttataattatagattcttggaaataaaatcataaaaacatacatgcctatgtttg 43872038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 8029403 - 8029332
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  8029403 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtttg 8029332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 18897989 - 18897920
Alignment:
Q  244 tgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  18897989 tgtgtttgtttcaagttataattgttgattcccggaaataaagtgatagaaatgtatatgcctatgtttg 18897920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 7053571 - 7053642
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  7053571 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 7053642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 1317088 - 1317017
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||    
T  1317088 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttg 1317017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 2657770 - 2657699
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| | ||||||||    
T  2657770 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatacctatgtttg 2657699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 14171083 - 14171012
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||||| ||||||||    
T  14171083 ggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatctatatgcctatgtttg 14171012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 6705766 - 6705837
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||| ||||||||||   | ||||||||| ||||||| ||||||  ||||||||    
T  6705766 ggtgtgtttgtttcaagttatatttgttgattcattggaataaaatggtagaaatatatatgtctatgtttg 6705837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 313
Target Start/End: Complemental strand, 16968989 - 16968924
Alignment:
Q  248 tttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||  |  ||||||||||||| ||| ||||||  ||||||||    
T  16968989 tttgtttcaagttataattgttgattcctgagaataaaatgataggaatctatatgtctatgtttg 16968924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 274
Target Start/End: Original strand, 10246223 - 10246255
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattc 274  Q
    |||||||||||||||||||||||||||||||||    
T  10246223 ggtgtgtttgtttcaagttataattgttgattc 10246255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 201995 - 201924
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  201995 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 201924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 303
Target Start/End: Complemental strand, 143678 - 143622
Alignment:
Q  247 gtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatg 303  Q
    ||||||||||||||| | ||||||||||  |  ||||||||||||||||| ||||||    
T  143678 gtttgtttcaagttaaatttgttgattcctgagaataaaatgatagaaatatatatg 143622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 555707 - 555778
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||    
T  555707 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatgtttg 555778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 4765561 - 4765632
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  4765561 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 4765632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 12970531 - 12970602
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  12970531 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 12970602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 14206822 - 14206893
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| ||||||||    
T  14206822 ggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgatagaaatgtatatgcctatgtttg 14206893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 19065506 - 19065577
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  19065506 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtttg 19065577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 36703944 - 36703873
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||  ||||||||    
T  36703944 ggtgtgtttgtttcaagttataattgttgattatcgggaataaaatgatagaaatgtatatgtctatgtttg 36703873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 6091782 - 6091714
Alignment:
Q  245 gtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| ||||||||    
T  6091782 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcctatgtttg 6091714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 22935913 - 22935984
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||    
T  22935913 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttg 22935984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 27481427 - 27481356
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||| ||||||||||| ||||||||    
T  27481427 ggtgtgtttgtttcaagttataatttttgatttttggaaataaaatgataggaatgtatatgcctatgtttg 27481356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 28602625 - 28602554
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||||    
T  28602625 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtttg 28602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 32536006 - 32535936
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||| ||||||||||||||||||| | | |||||||||||||||||||||||| |||||||||    
T  32536006 gtgtgtttgttttaagttataattgttgattcccaggaataaaatgatagaaatgtatatgtttatgtttg 32535936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 18412279 - 18412208
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||| |||||||  || ||||||||||||| ||||||||||| ||||||||    
T  18412279 ggtgtgtttgtttcaagttataattattgattcctgggaataaaatgataggaatgtatatgcctatgtttg 18412208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 11855658 - 11855727
Alignment:
Q  244 tgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||  |  ||||||||||||| ||||||||||| ||||||||    
T  11855658 tgtgtttgtttcaagttataattgttgattcctgagaataaaatgataggaatgtatatgcctatgtttg 11855727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 29543016 - 29543087
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||| | ||||||||||  ||||||||    
T  29543016 ggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgtctatgtttg 29543087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 42012180 - 42012251
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||| ||| |||| |||||||||||||| |||||||||||||||||  |||||  ||||||||    
T  42012180 ggtgtgtttgtttgaagctatatttgttgattctcgggaataaaatgatagaaatacatatgtctatgtttg 42012251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 8406959 - 8406893
Alignment:
Q  247 gtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||| |||||| |||| ||| ||||    
T  8406959 gtttgtttcaagttataattgttgattttcgagaataaaatgataggaatgtacatgcctatatttg 8406893  T

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Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 302
Target Start/End: Complemental strand, 6930715 - 6930654
Alignment:
Q  241 aggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatat 302  Q
    |||||||||| |||||||||||| ||||||||||  |  ||||||||||||||||| |||||    
T  6930715 aggtgtgtttatttcaagttatatttgttgattcctgagaataaaatgatagaaatatatat 6930654  T

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Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 26637045 - 26637105
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatg 303  Q
    ||||||||||||||||||||| |||||||||   || ||||||||||||||| | ||||||    
T  26637045 gtgtgtttgtttcaagttatatttgttgattaatgggaataaaatgatagaattatatatg 26637105  T

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Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 313
Target Start/End: Original strand, 8646412 - 8646463
Alignment:
Q  262 taattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||  ||||||||    
T  8646412 taattgttgattcccgggaataaaatgataggaatgtatatgtctatgtttg 8646463  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 20962659 - 20962610
Alignment:
Q  243 gtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatag 292  Q
    ||||||||||||||||||||| | || |||||| || |||||||||||||    
T  20962659 gtgtgtttgtttcaagttatattcgtagattcttgggaataaaatgatag 20962610  T

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Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 15200546 - 15200618
Alignment:
Q  241 aggtgtgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    ||||| ||||||||||||||||| || | |||| | | ||||||||||||| |||| ||||||  ||||||||    
T  15200546 aggtgcgtttgtttcaagttatatttatagatttttgaaaataaaatgatataaatatatatgtctatgtttg 15200618  T

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Target: scaffold0189 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 28957 - 29024
Alignment:
Q  246 tgtttgtttcaagttataattgttgattctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||    
T  28957 tgtttgtttcaagttataattgttgattttcgggaataaaatgataggaatgtatatgcctatgtttg 29024  T

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Target: scaffold0702 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 3566 - 3637
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttga-ttctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||| |||| || |||| || |||||||| ||| |||| ||||||| ||||||||    
T  3566 ggtgtgtttgtttcaagttatatttgtagatttctagg-aataaaattataaaaatatatatgcctatgtttg 3637  T

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Target: scaffold0662 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 4538 - 4467
Alignment:
Q  242 ggtgtgtttgtttcaagttataattgttga-ttctcggaaataaaatgatagaaatgtatatgcttatgtttg 313  Q
    |||||||||||||||||||||| |||| || |||| || |||||||| ||| |||| ||||||| ||||||||    
T  4538 ggtgtgtttgtttcaagttatatttgtagatttctagg-aataaaattataaaaatatatatgcctatgtttg 4467  T

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