View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5654_1D_low_35 (Length: 263)
Name: NF5654_1D_low_35
Description: NF5654_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5654_1D_low_35 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 8 - 263
Target Start/End: Original strand, 37144512 - 37144767
Alignment:
| Q |
8 |
gagatggacatcaccaagggcacatagcaagtaagatatctggagaacaaaatgataaaagtgataaactttaatacaatgttttgagctaggaaagcaa |
107 |
Q |
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| T |
37144512 |
gagatggccatcaccaagggcacatagcaagtaagatatctggagaacaaaatgataaaagtgataaactttaatacaatgttttgaactaggaaagcaa |
37144611 |
T |
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| Q |
108 |
ccacaattaaatagatggaaaatgagattgtatgcttggcaaatgtgtaaagtaaatgtttgaacattataaaaatatttagcataagcagatttgaaaa |
207 |
Q |
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| T |
37144612 |
ccacaattaaatagatggaaaatgagattgtatgcttggcaaatgtgtaaagtaaatgtttgaacattataaaaatatttagcataagcagatttgaaaa |
37144711 |
T |
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| Q |
208 |
aagatatcaatgcaatatatacccacaacaaccaacatatgttgaaacctaaagtt |
263 |
Q |
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| T |
37144712 |
aagatatcaatgcaatatatacccacaacaaccaacatatgttgaaacctaaagtt |
37144767 |
T |
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