View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5654_1D_low_49 (Length: 241)

Name: NF5654_1D_low_49
Description: NF5654_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5654_1D_low_49
NF5654_1D_low_49
[»] chr3 (85 HSPs)
chr3 (1-230)||(40275510-40275737)
chr3 (94-192)||(52375784-52375882)
chr3 (102-230)||(40838655-40838782)
chr3 (101-230)||(52236818-52236946)
chr3 (101-192)||(52237270-52237361)
chr3 (98-192)||(40275092-40275186)
chr3 (99-192)||(330289-330382)
chr3 (99-192)||(51827957-51828050)
chr3 (102-223)||(22370599-22370720)
chr3 (96-192)||(40839105-40839201)
chr3 (102-192)||(16689361-16689451)
chr3 (99-230)||(41998229-41998360)
chr3 (98-192)||(43678737-43678831)
chr3 (99-192)||(2044271-2044364)
chr3 (99-180)||(25534890-25534971)
chr3 (99-230)||(46013422-46013552)
chr3 (99-192)||(47431696-47431789)
chr3 (91-230)||(49951962-49952100)
chr3 (103-192)||(55389609-55389698)
chr3 (96-192)||(52375324-52375420)
chr3 (99-190)||(49720371-49720462)
chr3 (99-189)||(14654645-14654735)
chr3 (99-189)||(36701106-36701196)
chr3 (102-192)||(49951549-49951639)
chr3 (99-230)||(51828539-51828670)
chr3 (99-192)||(2051295-2051388)
chr3 (99-192)||(38535309-38535402)
chr3 (99-180)||(41998693-41998774)
chr3 (102-236)||(51473265-51473399)
chr3 (99-192)||(55390050-55390143)
chr3 (96-192)||(329843-329939)
chr3 (97-192)||(43678293-43678388)
chr3 (102-192)||(32730392-32730482)
chr3 (102-192)||(44676925-44677015)
chr3 (98-192)||(50662865-50662959)
chr3 (99-192)||(49720814-49720907)
chr3 (96-192)||(44676469-44676565)
chr3 (105-192)||(34105103-34105190)
chr3 (99-192)||(14654199-14654292)
chr3 (99-192)||(16701245-16701338)
chr3 (99-192)||(38535748-38535841)
chr3 (99-192)||(49407796-49407889)
chr3 (99-192)||(50900980-50901073)
chr3 (99-192)||(51472855-51472948)
chr3 (101-189)||(36701552-36701640)
chr3 (100-192)||(37075687-37075779)
chr3 (100-192)||(43222843-43222935)
chr3 (97-230)||(51828373-51828506)
chr3 (96-192)||(55192115-55192211)
chr3 (101-225)||(30513724-30513847)
chr3 (99-190)||(33412609-33412700)
chr3 (102-192)||(27199705-27199795)
chr3 (95-230)||(46013838-46013973)
chr3 (100-189)||(37076131-37076219)
chr3 (91-192)||(51828993-51829094)
chr3 (96-192)||(43222387-43222483)
chr3 (101-192)||(32730842-32730933)
chr3 (99-189)||(27200148-27200237)
chr3 (99-192)||(39010075-39010168)
chr3 (96-192)||(8874139-8874235)
chr3 (97-174)||(12141162-12141239)
chr3 (99-192)||(34104638-34104731)
chr3 (101-189)||(50900534-50900621)
chr3 (100-174)||(49408252-49408326)
chr3 (124-180)||(39010486-39010542)
chr3 (99-164)||(23644946-23645010)
chr3 (112-179)||(8873703-8873770)
chr3 (99-174)||(20840560-20840635)
chr3 (99-152)||(23644462-23644515)
chr3 (99-152)||(30104482-30104535)
chr3 (96-180)||(39556041-39556125)
chr3 (102-174)||(25612447-25612519)
chr3 (96-152)||(32535455-32535511)
chr3 (97-180)||(23228472-23228554)
chr3 (99-152)||(24301048-24301101)
chr3 (99-152)||(27393661-27393714)
chr3 (99-152)||(31779144-31779197)
chr3 (120-189)||(37847275-37847344)
chr3 (99-152)||(39555578-39555631)
chr3 (102-174)||(2323382-2323454)
chr3 (102-150)||(5136983-5137031)
chr3 (92-180)||(5137445-5137533)
chr3 (98-150)||(25853233-25853285)
chr3 (96-152)||(37727422-37727478)
chr3 (99-147)||(43973441-43973489)
[»] chr2 (59 HSPs)
chr2 (99-230)||(42192658-42192789)
chr2 (99-192)||(11540091-11540184)
chr2 (99-236)||(38007950-38008087)
chr2 (96-192)||(42192237-42192333)
chr2 (91-191)||(6949898-6949998)
chr2 (99-191)||(24140128-24140220)
chr2 (97-192)||(4355753-4355848)
chr2 (99-192)||(649527-649620)
chr2 (99-192)||(20128190-20128283)
chr2 (99-192)||(38008404-38008497)
chr2 (99-192)||(44220098-44220191)
chr2 (99-191)||(25336054-25336146)
chr2 (99-191)||(43216163-43216255)
chr2 (102-230)||(15550676-15550804)
chr2 (90-189)||(28143485-28143584)
chr2 (99-230)||(11539637-11539768)
chr2 (99-230)||(20127736-20127867)
chr2 (99-192)||(62957-63050)
chr2 (99-192)||(16952935-16953028)
chr2 (99-192)||(17060906-17060999)
chr2 (99-191)||(32418600-32418692)
chr2 (102-230)||(9330210-9330338)
chr2 (99-230)||(32418159-32418287)
chr2 (102-192)||(63417-63507)
chr2 (102-192)||(4808882-4808972)
chr2 (103-230)||(16175765-16175892)
chr2 (102-192)||(33920615-33920705)
chr2 (99-230)||(33921027-33921158)
chr2 (99-192)||(4356209-4356302)
chr2 (99-192)||(31797230-31797323)
chr2 (99-191)||(5560051-5560143)
chr2 (100-192)||(16953387-16953479)
chr2 (102-190)||(43160012-43160100)
chr2 (99-230)||(6949451-6949582)
chr2 (99-230)||(43160426-43160557)
chr2 (101-180)||(649802-649881)
chr2 (110-189)||(20495204-20495283)
chr2 (102-192)||(13315496-13315586)
chr2 (99-185)||(14942306-14942392)
chr2 (99-192)||(4809332-4809425)
chr2 (99-192)||(44219644-44219737)
chr2 (110-185)||(2190536-2190611)
chr2 (102-174)||(3824179-3824251)
chr2 (99-191)||(13399874-13399965)
chr2 (102-230)||(15551090-15551218)
chr2 (131-192)||(13399454-13399515)
chr2 (102-167)||(5561018-5561083)
chr2 (102-173)||(3822924-3822995)
chr2 (97-152)||(35779706-35779761)
chr2 (99-152)||(20440523-20440576)
chr2 (99-152)||(20444749-20444802)
chr2 (141-188)||(5037155-5037202)
chr2 (102-153)||(9329915-9329966)
chr2 (99-174)||(9747521-9747596)
chr2 (139-189)||(5035903-5035953)
chr2 (96-150)||(28616610-28616664)
chr2 (99-152)||(26538571-26538624)
chr2 (99-151)||(18450830-18450882)
chr2 (98-174)||(43058332-43058408)
[»] chr8 (45 HSPs)
chr8 (92-192)||(9796719-9796819)
chr8 (100-191)||(42035773-42035864)
chr8 (94-192)||(15255848-15255946)
chr8 (97-230)||(7911032-7911164)
chr8 (100-191)||(28254880-28254971)
chr8 (99-230)||(6115526-6115657)
chr8 (99-191)||(35427266-35427358)
chr8 (95-230)||(18049586-18049721)
chr8 (102-192)||(18050044-18050134)
chr8 (102-192)||(18428215-18428305)
chr8 (99-192)||(15256284-15256377)
chr8 (99-192)||(16578108-16578201)
chr8 (99-192)||(41260271-41260364)
chr8 (99-192)||(41260714-41260807)
chr8 (99-192)||(42036225-42036318)
chr8 (99-192)||(599532-599625)
chr8 (99-192)||(5730817-5730910)
chr8 (99-192)||(7910616-7910709)
chr8 (99-192)||(34799536-34799629)
chr8 (101-230)||(28254427-28254556)
chr8 (101-192)||(5731265-5731356)
chr8 (100-191)||(35693869-35693960)
chr8 (101-191)||(2208716-2208806)
chr8 (99-192)||(599951-600044)
chr8 (102-191)||(35694332-35694421)
chr8 (97-192)||(9797180-9797275)
chr8 (102-180)||(28877354-28877432)
chr8 (99-230)||(34799079-34799210)
chr8 (99-192)||(18674148-18674241)
chr8 (110-189)||(28876914-28876993)
chr8 (94-192)||(16578549-16578647)
chr8 (99-189)||(9930112-9930202)
chr8 (102-174)||(18805167-18805238)
chr8 (99-192)||(26252811-26252902)
chr8 (102-152)||(35426845-35426895)
chr8 (99-150)||(33742922-33742973)
chr8 (98-164)||(41681615-41681680)
chr8 (99-164)||(12571863-12571927)
chr8 (99-152)||(34541040-34541093)
chr8 (99-152)||(41681134-41681187)
chr8 (96-144)||(9178135-9178183)
chr8 (99-131)||(10046665-10046697)
chr8 (99-139)||(10919691-10919731)
chr8 (99-151)||(11656950-11657002)
chr8 (99-151)||(31133220-31133272)
[»] chr7 (59 HSPs)
chr7 (99-192)||(2758151-2758244)
chr7 (96-230)||(27245200-27245334)
chr7 (99-225)||(5333880-5334005)
chr7 (92-191)||(5334273-5334372)
chr7 (100-236)||(39388677-39388813)
chr7 (105-230)||(35161217-35161342)
chr7 (102-189)||(787242-787329)
chr7 (102-230)||(26026320-26026448)
chr7 (99-189)||(34595228-34595318)
chr7 (99-192)||(7732488-7732581)
chr7 (99-192)||(11971334-11971427)
chr7 (99-192)||(25637197-25637290)
chr7 (100-191)||(15712366-15712457)
chr7 (96-191)||(24929762-24929857)
chr7 (101-191)||(9181534-9181624)
chr7 (102-192)||(25637651-25637741)
chr7 (99-192)||(7732940-7733033)
chr7 (99-192)||(16081752-16081845)
chr7 (99-192)||(48248045-48248138)
chr7 (98-236)||(26048357-26048493)
chr7 (99-187)||(39136991-39137079)
chr7 (99-191)||(48247587-48247679)
chr7 (99-192)||(9181865-9181958)
chr7 (99-192)||(16917713-16917806)
chr7 (112-192)||(28687952-28688032)
chr7 (101-192)||(27245657-27245748)
chr7 (96-191)||(28687590-28687685)
chr7 (99-230)||(786782-786913)
chr7 (99-192)||(5746094-5746186)
chr7 (100-191)||(9394184-9394274)
chr7 (102-192)||(5745642-5745732)
chr7 (99-189)||(16081299-16081389)
chr7 (99-189)||(39136686-39136776)
chr7 (99-189)||(49064034-49064124)
chr7 (99-189)||(49064176-49064266)
chr7 (97-189)||(4477700-4477792)
chr7 (102-185)||(11973862-11973945)
chr7 (102-192)||(14311740-14311830)
chr7 (101-189)||(9393738-9393825)
chr7 (99-189)||(45815344-45815431)
chr7 (101-192)||(14311317-14311408)
chr7 (102-189)||(35578902-35578988)
chr7 (102-192)||(26026771-26026861)
chr7 (102-192)||(26047960-26048050)
chr7 (110-190)||(18535338-18535417)
chr7 (101-189)||(34594585-34594673)
chr7 (112-185)||(33880633-33880706)
chr7 (100-189)||(35579342-35579430)
chr7 (99-174)||(37787237-37787312)
chr7 (95-180)||(35288899-35288984)
chr7 (102-155)||(5184431-5184484)
chr7 (110-150)||(35160664-35160704)
chr7 (96-164)||(40669689-40669757)
chr7 (110-189)||(33881043-33881124)
chr7 (99-152)||(19590525-19590578)
chr7 (99-152)||(38859133-38859186)
chr7 (113-173)||(5445144-5445204)
chr7 (113-173)||(5454188-5454248)
chr7 (145-189)||(45815523-45815566)
[»] chr5 (47 HSPs)
chr5 (94-191)||(15115546-15115643)
chr5 (99-192)||(4967224-4967317)
chr5 (99-192)||(15029762-15029855)
chr5 (103-192)||(38900648-38900737)
chr5 (102-220)||(4966819-4966936)
chr5 (100-192)||(32697679-32697771)
chr5 (96-230)||(19291353-19291487)
chr5 (99-192)||(28290097-28290190)
chr5 (99-189)||(22651767-22651857)
chr5 (102-191)||(14340864-14340953)
chr5 (99-192)||(18149733-18149826)
chr5 (99-192)||(21371149-21371242)
chr5 (99-192)||(28289684-28289777)
chr5 (100-192)||(27307513-27307605)
chr5 (96-192)||(38901093-38901189)
chr5 (100-191)||(8419074-8419165)
chr5 (99-230)||(18150139-18150270)
chr5 (99-189)||(41834516-41834605)
chr5 (99-192)||(16752582-16752675)
chr5 (99-189)||(17260676-17260766)
chr5 (112-189)||(32305831-32305908)
chr5 (100-189)||(10721787-10721875)
chr5 (102-179)||(14340401-14340478)
chr5 (110-189)||(20266371-20266450)
chr5 (99-192)||(5162022-5162115)
chr5 (101-170)||(16753045-16753114)
chr5 (124-191)||(39083383-39083450)
chr5 (118-179)||(13557011-13557072)
chr5 (99-180)||(28495296-28495377)
chr5 (101-189)||(22651347-22651435)
chr5 (101-189)||(28595182-28595270)
chr5 (102-177)||(20260928-20261003)
chr5 (102-189)||(21370689-21370776)
chr5 (99-189)||(27307061-27307150)
chr5 (100-174)||(28494845-28494919)
chr5 (97-152)||(164189-164244)
chr5 (99-173)||(25974177-25974256)
chr5 (98-180)||(4623147-4623229)
chr5 (99-152)||(24362328-24362381)
chr5 (92-152)||(5819421-5819481)
chr5 (95-174)||(25973834-25973913)
chr5 (98-152)||(8647437-8647491)
chr5 (99-152)||(2865247-2865300)
chr5 (99-152)||(18183461-18183514)
chr5 (99-152)||(19359628-19359681)
chr5 (99-152)||(24331559-24331612)
chr5 (98-174)||(19359135-19359211)
[»] chr4 (71 HSPs)
chr4 (99-192)||(46737108-46737201)
chr4 (101-192)||(24851919-24852010)
chr4 (93-192)||(34789376-34789475)
chr4 (94-192)||(28465534-28465632)
chr4 (101-236)||(34789792-34789927)
chr4 (99-192)||(33689829-33689922)
chr4 (97-230)||(21034233-21034366)
chr4 (101-189)||(54440573-54440661)
chr4 (99-230)||(19528869-19529000)
chr4 (99-192)||(55677411-55677504)
chr4 (99-191)||(12593477-12593569)
chr4 (99-230)||(34807116-34807247)
chr4 (99-192)||(12593024-12593117)
chr4 (99-192)||(14440281-14440374)
chr4 (99-192)||(45838547-45838640)
chr4 (99-191)||(21034691-21034783)
chr4 (94-190)||(41608870-41608966)
chr4 (101-230)||(28465083-28465211)
chr4 (113-192)||(35193322-35193401)
chr4 (99-192)||(56077777-56077870)
chr4 (101-192)||(54441022-54441113)
chr4 (102-192)||(36168332-36168422)
chr4 (99-192)||(26974283-26974376)
chr4 (102-216)||(26974674-26974788)
chr4 (102-189)||(229615-229702)
chr4 (99-190)||(24851316-24851407)
chr4 (102-181)||(41608377-41608456)
chr4 (102-192)||(14439831-14439921)
chr4 (99-189)||(17503974-17504063)
chr4 (93-191)||(30597973-30598071)
chr4 (110-192)||(41114168-41114250)
chr4 (102-192)||(45839003-45839092)
chr4 (102-191)||(6617116-6617205)
chr4 (102-191)||(28166007-28166096)
chr4 (99-192)||(46736655-46736748)
chr4 (102-189)||(229164-229251)
chr4 (102-192)||(6616675-6616765)
chr4 (99-189)||(51309961-51310051)
chr4 (101-174)||(24336234-24336307)
chr4 (99-192)||(40160094-40160187)
chr4 (124-192)||(17504412-17504480)
chr4 (101-187)||(1397597-1397683)
chr4 (102-192)||(33777635-33777725)
chr4 (99-189)||(35193759-35193848)
chr4 (102-191)||(16214949-16215038)
chr4 (100-189)||(23986521-23986610)
chr4 (96-189)||(40160547-40160639)
chr4 (96-192)||(33778065-33778161)
chr4 (124-192)||(35643580-35643648)
chr4 (101-165)||(35644042-35644106)
chr4 (99-174)||(24335761-24335836)
chr4 (102-179)||(10795777-10795854)
chr4 (100-189)||(18965141-18965230)
chr4 (99-192)||(19529147-19529240)
chr4 (99-175)||(36168801-36168877)
chr4 (101-172)||(44219377-44219448)
chr4 (102-192)||(34807592-34807682)
chr4 (91-149)||(44892643-44892701)
chr4 (96-152)||(11153639-11153695)
chr4 (100-152)||(20958351-20958403)
chr4 (100-144)||(37336649-37336693)
chr4 (101-173)||(51641302-51641374)
chr4 (97-160)||(16691555-16691618)
chr4 (110-173)||(31297161-31297224)
chr4 (99-174)||(51309667-51309742)
chr4 (102-173)||(51640963-51641034)
chr4 (98-144)||(12234829-12234875)
chr4 (98-152)||(46193404-46193458)
chr4 (99-152)||(15523235-15523288)
chr4 (99-152)||(23494935-23494988)
chr4 (96-152)||(22434176-22434232)
[»] chr1 (70 HSPs)
chr1 (88-192)||(39485054-39485158)
chr1 (102-189)||(17641825-17641912)
chr1 (101-192)||(50304441-50304532)
chr1 (99-230)||(2868124-2868254)
chr1 (99-188)||(29438930-29439019)
chr1 (101-192)||(10278550-10278641)
chr1 (99-192)||(30786771-30786865)
chr1 (102-192)||(45048158-45048248)
chr1 (99-236)||(37505067-37505204)
chr1 (96-230)||(23340180-23340313)
chr1 (99-192)||(34555379-34555472)
chr1 (100-192)||(16298683-16298775)
chr1 (100-192)||(44954679-44954771)
chr1 (97-192)||(444004-444099)
chr1 (97-192)||(9992608-9992703)
chr1 (101-192)||(34555835-34555926)
chr1 (102-230)||(8230057-8230184)
chr1 (98-192)||(10279000-10279094)
chr1 (102-192)||(37421163-37421253)
chr1 (99-230)||(1837505-1837635)
chr1 (99-191)||(52335964-52336056)
chr1 (101-192)||(44582059-44582150)
chr1 (96-236)||(37505478-37505616)
chr1 (99-192)||(4080021-4080114)
chr1 (100-189)||(23526659-23526748)
chr1 (101-192)||(2867913-2868004)
chr1 (94-192)||(9992149-9992248)
chr1 (96-191)||(50305239-50305334)
chr1 (102-192)||(21938566-21938656)
chr1 (99-189)||(50926697-50926787)
chr1 (99-192)||(8229637-8229730)
chr1 (94-191)||(17088593-17088690)
chr1 (96-189)||(44291298-44291391)
chr1 (96-188)||(25274753-25274845)
chr1 (101-189)||(50926232-50926320)
chr1 (102-192)||(37421397-37421488)
chr1 (102-189)||(45048592-45048678)
chr1 (99-185)||(29021325-29021411)
chr1 (110-192)||(29439375-29439457)
chr1 (94-192)||(30787251-30787349)
chr1 (99-189)||(44802627-44802717)
chr1 (98-185)||(9833612-9833699)
chr1 (99-189)||(17088146-17088235)
chr1 (102-192)||(44954229-44954319)
chr1 (99-192)||(16299135-16299227)
chr1 (101-189)||(23526986-23527074)
chr1 (101-192)||(44582512-44582603)
chr1 (99-177)||(48173748-48173826)
chr1 (99-172)||(39843497-39843570)
chr1 (99-174)||(39485509-39485584)
chr1 (99-174)||(50419731-50419806)
chr1 (99-174)||(36228793-36228868)
chr1 (102-191)||(6224700-6224789)
chr1 (137-190)||(17641403-17641456)
chr1 (99-174)||(50970278-50970353)
chr1 (99-150)||(15646192-15646243)
chr1 (112-179)||(44291777-44291844)
chr1 (110-173)||(50419401-50419464)
chr1 (98-152)||(29307434-29307488)
chr1 (99-152)||(5540310-5540363)
chr1 (99-164)||(15646676-15646740)
chr1 (96-185)||(29020877-29020966)
chr1 (99-152)||(39154512-39154565)
chr1 (99-152)||(52268290-52268343)
chr1 (100-152)||(5539817-5539869)
chr1 (100-152)||(8678542-8678594)
chr1 (96-152)||(8679033-8679089)
chr1 (96-152)||(29870111-29870167)
chr1 (96-152)||(33144411-33144467)
chr1 (125-189)||(48174178-48174242)
[»] scaffold0097 (2 HSPs)
scaffold0097 (99-225)||(46266-46392)
scaffold0097 (99-192)||(46721-46814)
[»] chr6 (37 HSPs)
chr6 (99-230)||(31574141-31574271)
chr6 (99-192)||(5120922-5121015)
chr6 (102-192)||(24640638-24640728)
chr6 (98-192)||(31073595-31073689)
chr6 (102-192)||(25468852-25468942)
chr6 (98-192)||(25472466-25472560)
chr6 (99-192)||(35163640-35163733)
chr6 (99-192)||(5114468-5114561)
chr6 (91-192)||(28636284-28636385)
chr6 (99-192)||(31573720-31573814)
chr6 (96-192)||(32836449-32836545)
chr6 (96-152)||(22534217-22534273)
chr6 (98-178)||(31073142-31073222)
chr6 (99-189)||(30251148-30251238)
chr6 (99-192)||(29891080-29891173)
chr6 (102-171)||(31242809-31242878)
chr6 (99-175)||(835695-835771)
chr6 (101-189)||(33095716-33095804)
chr6 (94-189)||(835389-835484)
chr6 (102-189)||(32836010-32836096)
chr6 (102-189)||(35163187-35163273)
chr6 (97-152)||(18257629-18257684)
chr6 (100-153)||(30250722-30250775)
chr6 (102-180)||(3835190-3835268)
chr6 (96-150)||(10900424-10900478)
chr6 (96-174)||(33096082-33096160)
chr6 (99-152)||(28472637-28472690)
chr6 (99-152)||(29859826-29859879)
chr6 (99-152)||(29891577-29891630)
chr6 (99-174)||(11445457-11445532)
chr6 (99-174)||(23073999-23074074)
chr6 (99-180)||(20741100-20741181)
chr6 (91-152)||(11277074-11277135)
chr6 (99-152)||(12935157-12935210)
chr6 (99-164)||(15828122-15828186)
chr6 (99-152)||(22219845-22219898)
chr6 (102-174)||(18504922-18504994)
[»] scaffold0007 (4 HSPs)
scaffold0007 (99-189)||(210793-210883)
scaffold0007 (101-189)||(205823-205911)
scaffold0007 (102-189)||(204931-205018)
scaffold0007 (102-189)||(205361-205448)
[»] scaffold1432 (1 HSPs)
scaffold1432 (93-192)||(518-617)
[»] scaffold0712 (2 HSPs)
scaffold0712 (98-192)||(6391-6485)
scaffold0712 (102-188)||(6853-6939)
[»] scaffold0709 (2 HSPs)
scaffold0709 (98-192)||(6409-6503)
scaffold0709 (102-188)||(6871-6957)
[»] scaffold0108 (2 HSPs)
scaffold0108 (99-174)||(15113-15188)
scaffold0108 (98-189)||(15554-15645)
[»] scaffold0021 (2 HSPs)
scaffold0021 (112-179)||(159032-159099)
scaffold0021 (136-189)||(159337-159390)
[»] scaffold0173 (1 HSPs)
scaffold0173 (110-173)||(6553-6615)
[»] scaffold0295 (1 HSPs)
scaffold0295 (92-150)||(4786-4844)
[»] scaffold0057 (1 HSPs)
scaffold0057 (102-176)||(61926-62000)
[»] scaffold0176 (1 HSPs)
scaffold0176 (96-144)||(19121-19169)


Alignment Details
Target: chr3 (Bit Score: 168; Significance: 4e-90; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 40275737 - 40275510
Alignment:
Q  1 ataagtagaagcatgtgtatcatttgatcatcctttccttaaatccgtatgttgacttatacatatgaccaagtattaattatactaacatttaatttgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40275737 ataagtagaagcatgtgtatcatttgatcatcctttccttaaatccgtatgttgacttatacatatgaccaagtattaattatactaaaatttaatttgg 40275638  T
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnng 200  Q
    |||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||       |    
T  40275637 cttaattacacttttggtcctcacattttgaccaactcacg-aaatggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatg-ttttttg 40275540  T
Q  201 cagttttagtcatatccccttattttcaac 230  Q
    ||||||||||||||||||| ||||| ||||    
T  40275539 cagttttagtcatatccccctatttccaac 40275510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 52375882 - 52375784
Alignment:
Q  94 aatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52375882 aattaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactatatg 52375784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 102 - 230
Target Start/End: Original strand, 40838655 - 40838782
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnngc 201  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||       ||    
T  40838655 ttaattacacttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactatatg-ttttttgc 40838753  T
Q  202 agttttagtcatatccccttattttcaac 230  Q
    |||||||||||||||||| ||||| ||||    
T  40838754 agttttagtcatatccccctatttccaac 40838782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 52236818 - 52236946
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnng 200  Q
    |||||||| |||||| ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||       |    
T  52236818 cttaattacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttg 52236916  T
Q  201 cagttttagtcatatccccttattttcaac 230  Q
    ||||||||||||||||||| ||||||||||    
T  52236917 cagttttagtcatatccccctattttcaac 52236946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 52237361 - 52237270
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  52237361 cttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatg 52237270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 40275092 - 40275186
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||    
T  40275092 tggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatg 40275186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 330382 - 330289
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||    
T  330382 ggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactatatg 330289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 51827957 - 51828050
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  51827957 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactatatg 51828050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 223
Target Start/End: Original strand, 22370599 - 22370720
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnngc 201  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||       ||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttgc 22370698  T
Q  202 agttttagtcatatccccttat 223  Q
    |||||||||| |||| ||||||    
T  22370699 agttttagtcctatctccttat 22370720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 40839201 - 40839105
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  40839201 tttggtttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatg 40839105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 16689361 - 16689451
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| | |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  16689361 ttaattacagttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatatatg 16689451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 41998229 - 41998360
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| ||||||||||||  ||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| |||||||||||          
T  41998229 ggcttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 41998328  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     ||||||||||||||||| || ||||| ||||    
T  41998329 tgcagttttagtcatatctccctatttccaac 41998360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 43678831 - 43678737
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  43678831 tggcttaattacacttttggtccttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactatatg 43678737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 2044271 - 2044364
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||  ||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  2044271 ggcttaatttcacttttggttctcgcattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattatatg 2044364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 25534890 - 25534971
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtcc 180  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  25534890 ggcttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcc 25534971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 46013422 - 46013552
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||||          
T  46013422 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatg-ttttt 46013520  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     ||||||||||||||||| || ||||||||||    
T  46013521 tgcagttttagtcatatctccctattttcaac 46013552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 47431696 - 47431789
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||    
T  47431696 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactatatg 47431789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 91 - 230
Target Start/End: Complemental strand, 49952100 - 49951962
Alignment:
Q  91 tttaatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactata 190  Q
    |||| ||||||||||||| | |||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||  ||||||| |    
T  49952100 tttattttggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaactaca 49952001  T
Q  191 tgnnnnnnngcagttttagtcatatccccttattttcaac 230  Q
    ||       ||||||||||||||||| || ||||||||||    
T  49952000 tg-ttttttgcagttttagtcatatctccctattttcaac 49951962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 55389609 - 55389698
Alignment:
Q  103 taattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||| ||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  55389609 taattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactatatg 55389698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 96 - 192
Target Start/End: Original strand, 52375324 - 52375420
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||| ||||||||||||| |||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  52375324 tttggcttaattacacttttggtcctcacattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactatatg 52375420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 99 - 190
Target Start/End: Original strand, 49720371 - 49720462
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactata 190  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||    
T  49720371 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtata 49720462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 14654735 - 14654645
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||||    
T  14654735 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaactat 14654645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 36701106 - 36701196
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||| || | ||||||| ||||||||||||||||||||||||||||    
T  36701106 ggcttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaactat 36701196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 49951549 - 49951639
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  49951549 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 49951639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 51828539 - 51828670
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| |||||||||||| ||||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||| |||||||||||          
T  51828539 ggcttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactatatgtttttt 51828638  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     |||||||||||| |||| || ||||| ||||    
T  51828639 tgcagttttagtcctatctccctatttccaac 51828670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 2051295 - 2051388
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||| | |||||||||||    
T  2051295 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgttcttaaactatatg 2051388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 38535309 - 38535402
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  |||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  38535309 ggcttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 38535402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 41998774 - 41998693
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtcc 180  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  41998774 ggcttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtcc 41998693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 236
Target Start/End: Complemental strand, 51473399 - 51473265
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnngc 201  Q
    ||||||| ||||||| ||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||       ||    
T  51473399 ttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 51473300  T
Q  202 agttttagtcatatccccttattttcaacaccaaa 236  Q
    |||||||||| |||| || ||||| |||| |||||    
T  51473299 agttttagtcctatctccctatttccaactccaaa 51473265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 55390143 - 55390050
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||| ||||||||||||  |||||||||||    
T  55390143 ggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactatatg 55390050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 192
Target Start/End: Original strand, 329843 - 329939
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||| |||||| ||||||||| ||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  329843 tttggcataattacacttttggttcttccattttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactatatg 329939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 43678293 - 43678388
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||| ||||||||||||  |||||||||||||||||||| |||||| || || ||||||||||||||||||||||| |||||||||||    
T  43678293 ttggcttaattacacttttggtcctaccattttgaccaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 43678388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 32730392 - 32730482
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| |||||||||||| ||||||||||||||||  |||| |||||||||||||||||||| |||||||||||||| |||||||||||    
T  32730392 ttaattacacttttggtccttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactatatg 32730482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 44677015 - 44676925
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||    
T  44677015 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 44676925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 50662959 - 50662865
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||| ||| || || ||||||||||||||||||||||| |||||||||||    
T  50662959 tggcttaattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 50662865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 49720907 - 49720814
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||   |||||||||||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||    
T  49720907 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 49720814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 96 - 192
Target Start/End: Original strand, 44676469 - 44676565
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||| |||||||||||| |||||||||| |||||| |||| || || ||||||||||||||||||||||| ||||| |||||||||||    
T  44676469 tttggcttaattacacttttggtccttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactatatg 44676565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 192
Target Start/End: Complemental strand, 34105190 - 34105103
Alignment:
Q  105 attatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||| |||||||||||| ||||||||||||||| |||||  ||||||| ||||||||||||||||||||||||||| |||||||||||    
T  34105190 attacacttttggtccttgcattttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaactatatg 34105103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 14654199 - 14654292
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||| | ||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||  |||||||||||    
T  14654199 ggcttaattacacttttgatactaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatg 14654292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 16701338 - 16701245
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| | ||||||||||  ||||||||||||||||||||||||||| || || |||||| |||||||||||||||| |||||||||||    
T  16701338 ggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaactatatg 16701245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 38535841 - 38535748
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||| | |||| | ||||||||||||||| |||||||||| |||||||||||    
T  38535841 ggcttaattatacttttggtccgtgcattttgaccaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaactatatg 38535748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 49407796 - 49407889
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||| | ||||||| |||| |||||||| ||||| |||||| ||||    
T  49407796 ggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatg 49407889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 50901073 - 50900980
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||||||||||||||| ||||| ||||||| ||| ||||||  ||||||||||||| ||||| |||||||||||    
T  50901073 ggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactatatg 50900980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 51472855 - 51472948
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||| |  |||||||||||||||||| |||||||| |||| |||| ||||||    
T  51472855 ggcttaattatacttttggtccttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtatatg 51472948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 36701640 - 36701552
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||| |  |||||| ||||||||||||||| ||| ||||||||    
T  36701640 cttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactat 36701552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 37075687 - 37075779
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||| |||||||||||    
T  37075687 gcttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatcaaacaaacccgtccctaaactatatg 37075779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 43222935 - 43222843
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| | ||||||||||||||||||||||| | | ||||||||||||| | ||||||||||||||||||||||||||| |||||| ||||    
T  43222935 gcttaatcacacttttggtcctcgcattttgacaagcgcacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaactttatg 43222843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 97 - 230
Target Start/End: Complemental strand, 51828506 - 51828373
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnn 196  Q
    |||||||||||| ||||||||||||  || |||||||||||||||||||||||| ||  | |||||||||||||||||| |||| |||||||||||        
T  51828506 ttggcttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactatatgtttt 51828407  T
Q  197 nnngcagttttagtcatatccccttattttcaac 230  Q
       |||||||||||| |||| || ||||| ||||    
T  51828406 tttgcagttttagtcctatctccctatttccaac 51828373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 96 - 192
Target Start/End: Original strand, 55192115 - 55192211
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||| |||||| |||| ||||||||||||| |||||||||||||||   ||||||| ||||| ||||||| |||||||||||||||||    
T  55192115 tttggcttaattacacttttagtccccgcattttgaccagctcacgaaaatggtctcgcctctttcaaatcaaacaaaaccgtccataaactatatg 55192211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 225
Target Start/End: Original strand, 30513724 - 30513847
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnng 200  Q
    |||||||| | |||||||||| |||||||||| |||||||||||||||||||| || |||||||||||| |||||||| | |||||||||||       |    
T  30513724 cttaattacatttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgt-cttaaactatatgtttttctg 30513822  T
Q  201 cagttttagtcatatccccttattt 225  Q
    |||||||||||||||| || |||||    
T  30513823 cagttttagtcatatctccatattt 30513847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 33412700 - 33412609
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactata 190  Q
    |||||||||| |||||||||||||||||||||| || |||||||||||||| ||  ||||||  |||||||||||||||||| |||||||||    
T  33412700 ggcttaattacacttttggtcctcgcattttgatcagctcacgaaaatggttctgtctctttcgaatcgaacaaaatcgtccctaaactata 33412609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 27199705 - 27199795
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| | ||||||||||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||| ||||  |||||||||||    
T  27199705 ttaattacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactatatg 27199795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 230
Target Start/End: Complemental strand, 46013973 - 46013838
Alignment:
Q  95 atttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnn 194  Q
    |||| ||||||||| ||||||||| ||  ||||||||||||||| | |||||||| ||| || ||||||||||||||||||||||| |||||||||||      
T  46013973 attttgcttaattacacttttggtactatcattttgaccaactcccaaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt 46013874  T
Q  195 nnnnngcagttttagtcatatccccttattttcaac 230  Q
         |||||||||||| |||| || ||||| ||||    
T  46013873 tttttgcagttttagtcctatctccctatttccaac 46013838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 37076219 - 37076131
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||||| | |||||||||||||||||||| || ||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||    
T  37076219 gcttaattacatttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaatcgtcc-taaactat 37076131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 51829094 - 51828993
Alignment:
Q  91 tttaatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactata 190  Q
    |||||||||||||||||| |||||||||| |   ||||||| |||||||||||||||||| || || |||||| || ||||||||||||| |||||||||    
T  51829094 tttaatttggcttaattacacttttggtcatactattttgatcaactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactata 51828995  T
Q  191 tg 192  Q
    ||    
T  51828994 tg 51828993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 192
Target Start/End: Original strand, 43222387 - 43222483
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||||   |||||||| || ||||||||||||||||||||||| ||  |  |||||||||||||||||||||||||| |||||||||||    
T  43222387 tttggcttaattacgtttttggtcatcacattttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactatatg 43222483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 32730933 - 32730842
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||| |||||||||| |  |||||| ||||||||| ||||||||||||| || |||||||| |||||||||||||| |||||||||||    
T  32730933 cttaattacacttttggtcataccattttaaccaactcaagaaaatggtcctatcttttttaaattgaacaaaatcgtccttaaactatatg 32730842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 27200237 - 27200148
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||||| || ||||||| ||||||||||| | ||||| ||||||||    
T  27200237 ggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtcc-taaactat 27200148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 39010075 - 39010168
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| | |||||||||| |||||||||||||||||| ||| || || |||||||||||||||||||||||| || | |||||| ||||    
T  39010075 ggcttaattacatttttggtccttgcattttgaccaactcacaaaattgctcatacctcttttaaatcgaacaaaattgttcttaaactgtatg 39010168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 8874235 - 8874139
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||| ||||||| ||||||  ||| ||| ||||||||| ||||||||||||||||| | ||||||||||||||||||| | ||| |||||||||||    
T  8874235 tttggtttaattacacttttcatccccgcgttttgaccagctcacgaaaatggtcctgcttcttttaaatcgaacaaaaccttccctaaactatatg 8874139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 174
Target Start/End: Complemental strand, 12141239 - 12141162
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    |||||||||||| ||||||| |||||||||||| | ||  ||||| |||||||||||||||||| |||||||||||||    
T  12141239 ttggcttaattacacttttgttcctcgcatttttatcagatcacgtaaatggtcctacctctttcaaatcgaacaaaa 12141162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 34104638 - 34104731
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||| |||| |||||| || ||  |||||||||||||||||||||||||| ||| || |||||||| |||||||||||||  |||||||||||    
T  34104638 ggcttcattacactttttgttctaccattttgaccaactcacgaaaatggttctatcttttttaaattgaacaaaatcgtcattaaactatatg 34104731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 50900534 - 50900621
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||| |||||||||| ||  ||||||| || |||||||||||||||||| |||||| ||||||||||||| ||||| ||||||||    
T  50900534 cttaattaaacttttggtcttcaaattttgatcagctcacgaaaatggtcctaactctttcaaatcgaacaaaaccgtcc-taaactat 50900621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 49408326 - 49408252
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||||||||  |  |||||| |||||||||||||    
T  49408326 gcttaattacacttttggtactcgcattttgaccatctcacgaaaatggttgtgtctctttcaaatcgaacaaaa 49408252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 39010542 - 39010486
Alignment:
Q  124 cattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtcc 180  Q
    ||||||||||| |||||||||||| ||||| || |||||||||||||||||||||||    
T  39010542 cattttgaccagctcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtcc 39010486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 23645010 - 23644946
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaa 164  Q
    |||||||||||||||||||||||||  ||||| || |||||||||| |||||||||| ||||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacc-cttttaaa 23644946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 8873703 - 8873770
Alignment:
Q  112 ttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtc 179  Q
    |||||||||||||||||||| ||  | |||||||||||| |  |||||||||||||||||||| ||||    
T  8873703 ttttggtcctcgcattttgatcagtttacgaaaatggtcatgtctcttttaaatcgaacaaaaccgtc 8873770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 20840560 - 20840635
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| ||||||| ||| ||| |||| ||||||||    
T  20840560 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaa 20840635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 23644462 - 23644515
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| |||||||||||||| |||||| || |||||||||| |||||||    
T  23644462 ggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcct 23644515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 30104482 - 30104535
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  |||||||| |||||||||| |||||||    
T  30104482 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcct 30104535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 39556125 - 39556041
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaatcgtcc 180  Q
    ||||||||||||| ||||||||||||||  ||||| || |||||||||| ||||||| || |||||||| | ||||||||| ||||    
T  39556125 tttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaatggtcc 39556041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 25612519 - 25612447
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    ||||||| ||||||||||||||  |||||||| |||||||||| ||||||| ||  ||| |||| ||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaa 25612447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 32535511 - 32535455
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    ||||||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  32535511 tttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 32535455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 23228554 - 23228472
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtcc 180  Q
    |||||||||||| ||||||||||| ||  ||||| || ||||||||||||| || | || |||||||| |||||||||| ||||    
T  23228554 ttggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcc-cttttaaaacgaacaaaattgtcc 23228472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 24301101 - 24301048
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  24301101 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 24301048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 27393661 - 27393714
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  |||||||| |||||| ||| |||||||    
T  27393661 ggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcct 27393714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 31779197 - 31779144
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  31779197 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 31779144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 37847344 - 37847275
Alignment:
Q  120 ctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||||||||  | |||| |||||||||| | ||||||| ||||||||||||  ||||| ||||||||    
T  37847344 ctcgcattttgataagctcaggaaaatggtcttgcctctttcaaatcgaacaaagccgtccctaaactat 37847275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 39555578 - 39555631
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  39555578 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 39555631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 2323382 - 2323454
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    ||||||| | |||| ||||||||||||||||||  |||| |||||  | || ||||||| |||||||||||||    
T  2323382 ttaattacattttttgtcctcgcattttgaccagttcacaaaaattatactgcctctttcaaatcgaacaaaa 2323454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 5136983 - 5137031
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtc 150  Q
    ||||||| ||||||||||||||  ||||| ||||||||||||| |||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtc 5137031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 5137533 - 5137445
Alignment:
Q  92 ttaatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtcc 180  Q
    |||||| |||||||||| ||||||||||||||  ||||| || ||||| |||| |||| || ||  ||| |||| ||||||||| ||||    
T  5137533 ttaattaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtcc 5137445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 25853233 - 25853285
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtc 150  Q
    ||||||||||| ||||||||||||||  ||||| || |||||||||| |||||    
T  25853233 tggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 25853285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 37727478 - 37727422
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    ||||||||||||| |||||||||||||   ||||| || |||||||||| |||||||    
T  37727478 tttggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcct 37727422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 43973441 - 43973489
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatg 147  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatg 43973489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 42192789 - 42192658
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||          
T  42192789 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactagatgtttttt 42192690  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     |||||||||||||||||||| ||||| ||||    
T  42192689 tgcagttttagtcatatccccctatttccaac 42192658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 11540184 - 11540091
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11540184 ggcttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 11540091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 38007950 - 38008087
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||          
T  38007950 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 38008049  T
Q  199 ngcagttttagtcatatccccttattttcaacaccaaa 236  Q
     ||||||||||||||||| || ||||| |||| |||||    
T  38008050 tgcagttttagtcatatctccctatttccaactccaaa 38008087  T

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Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 96 - 192
Target Start/End: Original strand, 42192237 - 42192333
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42192237 tttggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 42192333  T

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Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 191
Target Start/End: Complemental strand, 6949998 - 6949898
Alignment:
Q  91 tttaatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactata 190  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||| |||||||||    
T  6949998 tttattttggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactata 6949899  T
Q  191 t 191  Q
    |    
T  6949898 t 6949898  T

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Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 24140220 - 24140128
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  24140220 ggcttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaactatat 24140128  T

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Target: chr2; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 4355753 - 4355848
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||| |||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  4355753 ttggcttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg 4355848  T

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Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 649527 - 649620
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||||||||| |||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  649527 ggcttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 649620  T

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Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 20128283 - 20128190
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  20128283 ggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactatatg 20128190  T

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Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 38008497 - 38008404
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  38008497 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 38008404  T

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Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 44220191 - 44220098
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| |||||||||||    
T  44220191 ggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactatatg 44220098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 25336146 - 25336054
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| |||||    
T  25336146 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattatat 25336054  T

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Target: chr2; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 43216255 - 43216163
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||||||||| |||||| ||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  43216255 ggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 43216163  T

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Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 230
Target Start/End: Original strand, 15550676 - 15550804
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnngc 201  Q
    ||||||| ||||||| |||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||       ||    
T  15550676 ttaattacacttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgc 15550775  T
Q  202 agttttagtcatatccccttattttcaac 230  Q
    |||||||||| |||  || ||||||||||    
T  15550776 agttttagtcctatttccctattttcaac 15550804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 28143584 - 28143485
Alignment:
Q  90 atttaatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||| ||| |||||||||  ||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  28143584 attttattaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactat 28143485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 11539637 - 11539768
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||| |||||||||||          
T  11539637 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 11539736  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     |||||||||||| |||| || ||||| ||||    
T  11539737 tgcagttttagtcctatctccctatttccaac 11539768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 20127736 - 20127867
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| ||||||||||||  |||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||          
T  20127736 ggcttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 20127835  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     |||||||||||| |||| || ||||| ||||    
T  20127836 tgcagttttagtcctatctccctatttccaac 20127867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 62957 - 63050
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||| |||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||    
T  62957 ggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactatatg 63050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 16952935 - 16953028
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| ||| || || ||||||||||||||||||||||| |||||||||||    
T  16952935 ggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatg 16953028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 17060906 - 17060999
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| ||| || || ||||||||||||||||||||||| |||||||||||    
T  17060906 ggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatg 17060999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 32418692 - 32418600
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||||||||||||||||||||||  |||||||||||| |||||||| || | |||||||||||||||||||||||||||||| ||||||||||    
T  32418692 ggcttaattatacttttggtcctatcattttgaccaattcacgaaattgattctacctcttttaaatcgaacaaaatcgtccttaaactatat 32418600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 230
Target Start/End: Complemental strand, 9330338 - 9330210
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnngc 201  Q
    ||||||| |||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||  ||||||||||       ||    
T  9330338 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactatatgtttttttgc 9330239  T
Q  202 agttttagtcatatccccttattttcaac 230  Q
    |||||||||| ||||  | ||||||||||    
T  9330238 agttttagtcctatctacctattttcaac 9330210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 32418159 - 32418287
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||           
T  32418159 ggcttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactatat-attttt 32418255  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     ||||||||||||||||| |||||||| ||||    
T  32418256 tgcagttttagtcatatctccttatttccaac 32418287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 63507 - 63417
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||||| || |||||||||||| ||||||||||||| |||||||||||    
T  63507 ttaattatatttttggtccttgtattttgaccaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactatatg 63417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 4808882 - 4808972
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| | |||| || || |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  4808882 ttaattacatttttagttcttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactatatg 4808972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 230
Target Start/End: Complemental strand, 16175892 - 16175765
Alignment:
Q  103 taattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnngca 202  Q
    |||||| ||||||||||||  |||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||       |||    
T  16175892 taattacacttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttttgca 16175793  T
Q  203 gttttagtcatatccccttattttcaac 230  Q
    ||||||||| |||| || ||||| ||||    
T  16175792 gttttagtcctatctccctatttccaac 16175765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 33920615 - 33920705
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| | |||||||||| |||||||||||||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||    
T  33920615 ttaattacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatg 33920705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 33921158 - 33921027
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||  ||||||| |||          
T  33921158 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatgtttttt 33921059  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     |||||||||||| |||| || ||||| ||||    
T  33921058 tgcagttttagtcctatctccctatttccaac 33921027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 4356302 - 4356209
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  ||||||||||||||||||| ||||||| || || ||||||||||||||||||||||| |||||||||||    
T  4356302 ggcttaattacacttttggtcctatcattttgaccaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 4356209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 31797323 - 31797230
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||||| | ||||||| ||||||||||||| ||||| |||||||||||    
T  31797323 ggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatatg 31797230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 5560051 - 5560143
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||||| || || |||||||| |||||||||||||| ||||||||||    
T  5560051 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaactatat 5560143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 16953479 - 16953387
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||| |||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||  |||| |||| ||||||    
T  16953479 gcttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtatatg 16953387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 190
Target Start/End: Original strand, 43160012 - 43160100
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactata 190  Q
    ||||||| | |||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  43160012 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactata 43160100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 6949451 - 6949582
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| | ||||||||||  ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| | |||||||||          
T  6949451 ggcttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactatatgtttttt 6949550  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     |||||||||||| |||| || ||||| ||||    
T  6949551 tgcagttttagtcctatctccctatttccaac 6949582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 43160557 - 43160426
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| ||||| ||||||  ||||||||| |||||||||||||||||||| || ||||||||||||| ||||||||| |||||||||||          
T  43160557 ggcttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactatatgtttttt 43160458  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     |||||||||||| |||| || ||||| ||||    
T  43160457 tgcagttttagtcctatctccctatttccaac 43160426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 649881 - 649802
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtcc 180  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  649881 cttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtcc 649802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 20495204 - 20495283
Alignment:
Q  110 acttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||||| |||||||||||||||||||||||||||| || | ||||||||||||| ||||||||||||| ||||||||    
T  20495204 acttttggttctcgcattttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaactat 20495283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 13315496 - 13315586
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| |||||| |||||  |||||||||||||||| |||||||||| || || ||||||||||||||||||||||| |||||||||||    
T  13315496 ttaattacactttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 13315586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 14942392 - 14942306
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaa 185  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||||||||| |  |||||| |||||||||||||| |||||||||    
T  14942392 ggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaa 14942306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 4809425 - 4809332
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  ||||||||| ||||||||||||||||||||  | |||||||| ||||||| |||||| |||||||||||    
T  4809425 ggcttaattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaactatatg 4809332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 44219644 - 44219737
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  |||||||| |||||||| |||||| |||||||| |||||||||||||||||| |||| |||| ||||||    
T  44219644 ggcttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattatatg 44219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 2190611 - 2190536
Alignment:
Q  110 acttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaa 185  Q
    |||||||||| |||||||||||||| ||||||||| ||||||| ||| ||| ||||||||||||||||||| ||||    
T  2190611 acttttggtcatcgcattttgaccagctcacgaaattggtcctgcctttttcaaatcgaacaaaatcgtccctaaa 2190536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 3824251 - 3824179
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||| | ||  |||||||||||||||||    
T  3824251 ttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaa 3824179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 13399965 - 13399874
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||||||||  | |||| |||||  ||||||||||||||||||||||||||| ||  |||||||||||||||||||| |||| ||||||||||    
T  13399965 ggcttaattgcaattttagtcctaccattttgaccaactcacgaaaatggtc-tatttcttttaaatcgaacaaaattgtccttaaactatat 13399874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 230
Target Start/End: Complemental strand, 15551218 - 15551090
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnngc 201  Q
    ||||||| |||||||| |||  ||||||||||||||||| ||||||||| ||  | ||||||||||||||||||||||| |||  ||||||       ||    
T  15551218 ttaattacacttttggccctaccattttgaccaactcacaaaaatggtcatatattttttaaatcgaacaaaatcgtccttaagttatatgtttttttgc 15551119  T
Q  202 agttttagtcatatccccttattttcaac 230  Q
    |||||||||| |||| || ||||| ||||    
T  15551118 agttttagtcctatctccctatttccaac 15551090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 13399454 - 13399515
Alignment:
Q  131 accaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||    
T  13399454 accaattcacgaaattggtcatacctcttttaaatggaacaaaatcgtccctaaactatatg 13399515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 5561083 - 5561018
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcg 167  Q
    |||||||  ||||||||||| ||||||| || ||||||||||| || |||||||||||||||||||    
T  5561083 ttaattacccttttggtccttgcattttaactaactcacgaaattgatcctacctcttttaaatcg 5561018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 3822924 - 3822995
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaa 173  Q
    ||||||| |||||||||||||||||||| ||||||||| |||| || |||| ||  ||||||| ||||||||    
T  3822924 ttaattacacttttggtcctcgcattttaaccaactcatgaaattgatcctgccctttttaaaccgaacaaa 3822995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 152
Target Start/End: Original strand, 35779706 - 35779761
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||||| ||||||||||||||  |||||||  ||||||||||||||||||    
T  35779706 ttggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcct 35779761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 20440576 - 20440523
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| ||||||||||||| |||||||    
T  20440576 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcct 20440523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 20444749 - 20444802
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| ||||||||||||| |||||||    
T  20444749 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcct 20444802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 5037202 - 5037155
Alignment:
Q  141 gaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaacta 188  Q
    |||||||||| | |||||||||||| |||||||||||||| |||||||    
T  5037202 gaaaatggtcatgcctcttttaaattgaacaaaatcgtccctaaacta 5037155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 9329915 - 9329966
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtccta 153  Q
    ||||||| ||||||||||||   |||||||||||||||| ||||||||||||    
T  9329915 ttaattacacttttggtcctacaattttgaccaactcacaaaaatggtccta 9329966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 9747521 - 9747596
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    |||||||||  ||||||| |||||||||||||||   ||||||||| |||| || ||| ||||||||| |||||||    
T  9747521 ggcttaattgcacttttgatcctcgcattttgacatgctcacgaaattggttctgccttttttaaatccaacaaaa 9747596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 5035903 - 5035953
Alignment:
Q  139 acgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||||||||||  || ||||||||||||||||| ||||| ||||||||    
T  5035903 acgaaaatggtcctgtcttttttaaatcgaacaaaaccgtccctaaactat 5035953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 28616610 - 28616664
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtc 150  Q
    ||||||||||||| ||||||||||||||  ||||| || |||||||||| |||||    
T  28616610 tttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 28616664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 26538624 - 26538571
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  26538624 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 26538571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 18450830 - 18450882
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcc 151  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| ||||||    
T  18450830 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcc 18450882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 43058332 - 43058408
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    ||||||||||| ||||||| ||||||  ||||| ||||||||| ||| ||||||| ||| ||| |||  ||||||||    
T  43058332 tggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaa 43058408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 9796719 - 9796819
Alignment:
Q  92 ttaatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  9796719 ttaatttggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactatat 9796818  T
Q  192 g 192  Q
    |    
T  9796819 g 9796819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 42035773 - 42035864
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42035773 gcttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatat 42035864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 15255848 - 15255946
Alignment:
Q  94 aatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  15255848 aattaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 15255946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 97 - 230
Target Start/End: Complemental strand, 7911164 - 7911032
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnn 196  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||         
T  7911164 ttggcttaattacacttttaatcctcgcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactatat-attt 7911066  T
Q  197 nnngcagttttagtcatatccccttattttcaac 230  Q
       |||||||||||||||||||  ||||||||||    
T  7911065 tttgcagttttagtcatatccctctattttcaac 7911032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 28254971 - 28254880
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 28254880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 6115657 - 6115526
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||          
T  6115657 ggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 6115558  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     | |||||||||  |||| |||||||||||||    
T  6115557 tgtagttttagttctatctccttattttcaac 6115526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 35427358 - 35427266
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| |||||    
T  35427358 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattatat 35427266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 230
Target Start/End: Original strand, 18049586 - 18049721
Alignment:
Q  95 atttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnn 194  Q
    |||||||| ||||| ||||||||||||  |||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| |||||||||||      
T  18049586 atttggctcaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt 18049685  T
Q  195 nnnnngcagttttagtcatatccccttattttcaac 230  Q
         |||||||||||| |||| || ||||| ||||    
T  18049686 tttttgcagttttagtcctatctccctatttccaac 18049721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 18050134 - 18050044
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| | |||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  18050134 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg 18050044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 18428305 - 18428215
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  18428305 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 18428215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 15256377 - 15256284
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  |||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  15256377 ggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 15256284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 16578108 - 16578201
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| | ||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||    
T  16578108 ggcttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatg 16578201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 41260271 - 41260364
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  |||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  41260271 ggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 41260364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 41260807 - 41260714
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||    
T  41260807 ggcttaattatacttttggtcattgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatg 41260714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 42036318 - 42036225
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||||||||  || ||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||||    
T  42036318 ggcttaattatacttttcatcttcgcattttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaactatatg 42036225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 599532 - 599625
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| | |||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| |||| ||||||    
T  599532 ggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattatatg 599625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 5730817 - 5730910
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||| |||||| || ||||||||| ||||||||||||| |||||||||||    
T  5730817 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactatatg 5730910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 7910616 - 7910709
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| | ||||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| |||| ||||||    
T  7910616 ggcttaattacatttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaattatatg 7910709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 34799629 - 34799536
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  |||||||||||| | |||||| |||||||||||||||||||||||||||||| |||| |||||||||||    
T  34799629 ggcttaattacacttttggtcctttcattttgaccaattaacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatg 34799536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 28254427 - 28254556
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnng 200  Q
    |||||||| ||||||||||||  |||||||| ||||||||||||||||||||| || |||||||| |||||||||||||| |||||||||||       |    
T  28254427 cttaattacacttttggtcctaccattttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactatatgtttttttg 28254526  T
Q  201 cagttttagtcatatccccttattttcaac 230  Q
    ||||||||||| |||| || ||||| ||||    
T  28254527 cagttttagtcctatctccctatttccaac 28254556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 5731356 - 5731265
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||||| ||| | ||||||||||||||||| |||| |||| |||||| || ||||||||||||||||||||||||||||||||    
T  5731356 cttaattatactttttgtcattgcattttgaccaactcaggaaattggttctaccttttataaatcgaacaaaatcgtccataaactatatg 5731265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 35693869 - 35693960
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||||| ||||||| |||| ||||||||||||| | ||||||||| | ||||||||||||||||||| |||||||||||||||||||||    
T  35693869 gcttaattacacttttgatccttgcattttgaccaatttacgaaaatgattctacctcttttaaatcgaataaaatcgtccataaactatat 35693960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 191
Target Start/End: Original strand, 2208716 - 2208806
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||||||| ||||||| ||||  ||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  2208716 cttaattacacttttgatcctaccattttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 2208806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 600044 - 599951
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  |||||||||||||| |||||||||||| || || |||||||| |||||||||||||| |||||||||||    
T  600044 ggcttaattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaactatatg 599951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 35694421 - 35694332
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||| ||||||||||||  ||||||||| ||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  35694421 ttaattacacttttggtccttccattttgactaactcacaaaaatggtcctacattttttaaatcgaacaaaatcgtccttaaactatat 35694332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 9797275 - 9797180
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||| ||||||| ||||||||||||  |||||||||||||||||||||||||| ||| || ||||||||| || |||||||||| |||||||||||    
T  9797275 ttggattaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaactatatg 9797180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 28877432 - 28877354
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtcc 180  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||| ||||||||| ||||    
T  28877432 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtcc 28877354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 34799079 - 34799210
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| |||||||||| |  |||||||||||||||| |||||||||||||  | |||||||||||||||| |||||| |||||||||||          
T  34799079 ggcttaattacacttttggtcataccattttgaccaactcatgaaaatggtcctattttttttaaatcgaacaaagtcgtccttaaactatatgtttttt 34799178  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     |||||||||||| |||| || ||||| ||||    
T  34799179 tgcagttttagtcctatctccctatttccaac 34799210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 18674148 - 18674241
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||| |||||||| ||| ||||||||| |||||||| |||| || || |||||||||||||||||||||||| |||||||||||    
T  18674148 ggcttaattacactcttggtccttgcactttgaccaattcacgaaattggttcttccacttttaaatcgaacaaaatcgtccctaaactatatg 18674241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 28876914 - 28876993
Alignment:
Q  110 acttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||||||||||||||| || |||||||||||  | || ||||||| ||||||||||||||||||| ||||||||    
T  28876914 acttttggtcctcgcattttgatcagctcacgaaaataattctgcctctttcaaatcgaacaaaatcgtccctaaactat 28876993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 16578647 - 16578549
Alignment:
Q  94 aatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||| |||||||||| ||||||||||||  ||||||||| ||||||||||||||||  || || ||| ||||||||||||||| ||  |||||||||||    
T  16578647 aattaggcttaattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttttcaaatcgaacaaaatcatcattaaactatatg 16578549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 9930202 - 9930112
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| |||||||||||||| |||||| || |||||||||| ||||||| ||  ||| |||| ||||||||| |||| | ||||||    
T  9930202 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactat 9930112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 18805167 - 18805238
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    ||||||| |||||||||||  |||||||||| | |||||||||||||| ||  ||||||||||||||||||||    
T  18805167 ttaattacacttttggtccctgcattttgacaagctcacgaaaatggttct-tctcttttaaatcgaacaaaa 18805238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 26252811 - 26252902
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||| || | |||||  ||| || |||||||| ||||   | |||||||||||||||||||||||||| |||||||||||    
T  26252811 ggcttaattacacttttgatctttgcatt--gactaattcacgaaattggtaacatctcttttaaatcgaacaaaatcgtccctaaactatatg 26252902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 35426845 - 35426895
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    ||||||| |||||| |||||  |||||||||||||||||||||||||||||    
T  35426845 ttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcct 35426895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 33742922 - 33742973
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtc 150  Q
    |||||||||| ||||||||||||||  |||||||| |||||||||| |||||    
T  33742922 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtc 33742973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 41681680 - 41681615
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaa 164  Q
    ||||||||||| ||||||||||||||  ||||| || | |||||||| |||||||||| ||||||||    
T  41681680 tggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacc-cttttaaa 41681615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 12571863 - 12571927
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaa 164  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||| ||||| ||||||||    
T  12571863 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacc-cttttaaa 12571927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 34541093 - 34541040
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  34541093 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 34541040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 41681134 - 41681187
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  41681134 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 41681187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 9178183 - 9178135
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaa 144  Q
    ||||||||||||| ||||||||||||||  ||||| || ||||||||||    
T  9178183 tttggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 9178135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 10046665 - 10046697
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttga 131  Q
    |||||||||| ||||||||||||||||||||||    
T  10046665 ggcttaattacacttttggtcctcgcattttga 10046697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 10919731 - 10919691
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactca 139  Q
    |||||||||||||||||||||||||  |||||||| |||||    
T  10919731 ggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 11657002 - 11656950
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcc 151  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| ||||||    
T  11657002 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcc 11656950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 31133220 - 31133272
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcc 151  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| ||||||    
T  31133220 ggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcc 31133272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 2758244 - 2758151
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2758244 ggcttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatg 2758151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 27245200 - 27245334
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnn 195  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||| |||||       
T  27245200 tttggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatgttt 27245299  T
Q  196 nnnngcagttttagtcatatccccttattttcaac 230  Q
        |||||||||||| |||| |||||||| ||||    
T  27245300 ttttgcagttttagtcctatctccttatttccaac 27245334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 99 - 225
Target Start/End: Original strand, 5333880 - 5334005
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||          
T  5333880 ggcttaattacacttttgatccttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttt 5333978  T
Q  199 ngcagttttagtcatatccccttattt 225  Q
     |||||||||||||||||||| |||||    
T  5333979 tgcagttttagtcatatccccctattt 5334005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 92 - 191
Target Start/End: Complemental strand, 5334372 - 5334273
Alignment:
Q  92 ttaatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||||| | |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  5334372 ttaattagacttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 5334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 100 - 236
Target Start/End: Complemental strand, 39388813 - 39388677
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnn 199  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||  |||||||||||           
T  39388813 gcttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgttttttt 39388714  T
Q  200 gcagttttagtcatatccccttattttcaacaccaaa 236  Q
    |||||||||||| |||| || |||||||||| |||||    
T  39388713 gcagttttagtcctatctccctattttcaactccaaa 39388677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 230
Target Start/End: Complemental strand, 35161342 - 35161217
Alignment:
Q  105 attatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnngcagt 204  Q
    |||| |||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||       |||||    
T  35161342 attacacttttggtccttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagt 35161243  T
Q  205 tttagtcatatccccttattttcaac 230  Q
    |||||||||||| || ||||| ||||    
T  35161242 tttagtcatatctccctatttccaac 35161217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 787329 - 787242
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  787329 ttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 787242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 102 - 230
Target Start/End: Original strand, 26026320 - 26026448
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnngc 201  Q
    ||||||| |||||||||||| | |||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||       ||    
T  26026320 ttaattacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactatatgtttttttgc 26026419  T
Q  202 agttttagtcatatccccttattttcaac 230  Q
    |||||||||| |||| || ||||||||||    
T  26026420 agttttagtcttatctccctattttcaac 26026448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 34595318 - 34595228
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||    
T  34595318 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactat 34595228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 7732488 - 7732581
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| | |||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  7732488 ggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatg 7732581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 11971334 - 11971427
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  11971334 ggcttaattatacttttggtcctaccattttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 11971427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 25637197 - 25637290
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||||||||| |||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  25637197 ggcttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 25637290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 15712366 - 15712457
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||||| ||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  15712366 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 15712457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 96 - 191
Target Start/End: Complemental strand, 24929857 - 24929762
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||    
T  24929857 tttggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactatat 24929762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 101 - 191
Target Start/End: Original strand, 9181534 - 9181624
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  9181534 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 9181624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 25637741 - 25637651
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  25637741 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 25637651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 7733033 - 7732940
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||    
T  7733033 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 7732940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 16081845 - 16081752
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| || ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||| ||| |||||||||||    
T  16081845 ggcttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactatatg 16081752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 48248138 - 48248045
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  48248138 ggcttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 48248045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 98 - 236
Target Start/End: Complemental strand, 26048493 - 26048357
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnn 197  Q
    ||||||||||| ||||||| |||| || ||||||||||||||||||| ||||||||||||||||||||| |||||||| |||| |||||||||||         
T  26048493 tggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactatatg--ttt 26048396  T
Q  198 nngcagttttagtcatatccccttattttcaacaccaaa 236  Q
      ||||||||||||||||| || ||||| |||| |||||    
T  26048395 ttgcagttttagtcatatctccctatttccaactccaaa 26048357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 187
Target Start/End: Complemental strand, 39137079 - 39136991
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaact 187  Q
    |||||||||| ||||||| |||||| |||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39137079 ggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaact 39136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 48247587 - 48247679
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||| |||| |||||    
T  48247587 ggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagtatat 48247679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 9181958 - 9181865
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||| |||| ||||||||||||| |||||||| || || ||||||||||||||||||||||||||||| |||||||||||    
T  9181958 ggcttaattacacttttgatccttgcattttgaccaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatg 9181865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 16917713 - 16917806
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||||| || || ||||||||||||||||||| ||| |||||||||||    
T  16917713 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg 16917806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 28688032 - 28687952
Alignment:
Q  112 ttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||||||||||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||    
T  28688032 ttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatg 28687952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 27245748 - 27245657
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||||||||| |  |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||| |||| ||||||    
T  27245748 cttaattatacttttggtcttaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaattatatg 27245657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 191
Target Start/End: Original strand, 28687590 - 28687685
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||||||||| |||||||||| |  |||||||||||||||||||||||||| ||| || || |||||||||||||||||||| ||||||||||    
T  28687590 tttggcttaattacacttttggtcatatcattttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactatat 28687685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 786782 - 786913
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| ||||||| ||||  ||||||||||||||||||||||||||| ||||| ||||||||||||||||||  ||| |||||||||||          
T  786782 ggcttaattacacttttgatccttccattttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactatatgtttttt 786881  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     |||||||||||| |||| || ||||| ||||    
T  786882 tgcagttttagtcctatctccctatttccaac 786913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 5746186 - 5746094
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||| || || | ||||||||||||||||||||| |||||||||||||||||    
T  5746186 ggcttaattacacttttggtccttgcattttgactaactcacgaaattgatc-tgcctcttttaaatcgaacaaaaccgtccataaactatatg 5746094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 9394274 - 9394184
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||||| |||||||||| |||||||||||||| ||||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||||||    
T  9394274 gcttaattacacttttggtc-tcgcattttgaccagctcacaaaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaactatat 9394184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 5745642 - 5745732
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||||| || || ||||||||||||||||||| | | |||||||||||    
T  5745642 ttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatctttcttaaactatatg 5745732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 16081299 - 16081389
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| ||||||||||||   ||||||||||||||| | ||||||||||| || ||||||||||||||||||||||| ||||||||    
T  16081299 ggcttaattacacttttggtccttctattttgaccaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 16081389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 39136686 - 39136776
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| ||||||| |||| |||||||||||| |||||||||||||| ||  |||||| ||||||||||||||||||| ||||||||    
T  39136686 ggcttaattacacttttgatccttgcattttgaccagctcacgaaaatggttctgactctttcaaatcgaacaaaatcgtccctaaactat 39136776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 49064034 - 49064124
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||  | ||||||| |||| |||||||||| ||||||||||||    
T  49064034 ggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaactat 49064124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 49064266 - 49064176
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||||||||||| ||||| ||||||| |||  |||||||||||||| |  |||||| |||||||||||||||||| |||||||||    
T  49064266 ggcttaattatacttttgatcctcacattttggccagttcacgaaaatggtcatgactctttcaaatcgaacaaaatcgtcaataaactat 49064176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 4477700 - 4477792
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||||| ||| ||| ||||  |||||||||||| |||||||||||||||  |||||||||||| ||| |||||||||| ||||||||    
T  4477700 ttggcttaattacactattgatccttacattttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaactat 4477792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 11973945 - 11973862
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaa 185  Q
    ||||||| | |||||||||| ||||||||||||||  |||||| |||| ||||||||||||||| |||||||||||||| ||||    
T  11973945 ttaattacatttttggtccttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaa 11973862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 14311830 - 14311740
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| |||||| ||| |  || |||||||||||||| |||||||||||| || ||||||||||||||||||||||  |||||||||||    
T  14311830 ttaattacactttttgtcgtaccaatttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatg 14311740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 9393738 - 9393825
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||| ||||||| |||||||||||||| || ||||||||||| ||| | ||||||| ||||||||||||| ||||| ||||||||    
T  9393738 cttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtcc-taaactat 9393825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 45815344 - 45815431
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| |||||||||||| |||||||||||| ||   |||||||||| | ||||||| ||||||||||||| ||||| ||||||||    
T  45815344 ggcttaattacacttttggtccttgcattttgaccagct---gaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat 45815431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 14311317 - 14311408
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||| || ||||||| |||||||||  ||| ||||  |||||||||||||| ||| |||||||||| |||||||||||    
T  14311317 cttaattatatttttggtacttgcattttaaccaactcataaaattggttatacctcttttaaattgaataaaatcgtccctaaactatatg 14311408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 35578902 - 35578988
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||| |||||||||| | |||||||||||| ||||| ||||||||||| || |||| ||||||||||||| ||| ||||||||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgt-cataaactat 35578988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 26026861 - 26026771
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| ||||||||||||   |||||||| || ||||||||||||||||| || || |||||||||||||| | ||| |||||||||||    
T  26026861 ttaattacacttttggtcctactattttgacaaattcacgaaaatggtcctatcttttataaatcgaacaaaaccatccttaaactatatg 26026771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 26047960 - 26048050
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| ||||||| | ||  ||||| ||||||||||||||||||||| || || |||||||||||| ||||| |||| |||||||||||    
T  26047960 ttaattacacttttgattctaccatttcgaccaactcacgaaaatggtcatatcttttttaaatcgaataaaattgtccttaaactatatg 26048050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 190
Target Start/End: Complemental strand, 18535417 - 18535338
Alignment:
Q  110 acttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactata 190  Q
    |||||||||||||| ||||||||   |||| |||||||||| ||||||||| ||||||||||||| ||||| |||||||||    
T  18535417 acttttggtcctcgtattttgacatgctcaagaaaatggtc-tacctctttcaaatcgaacaaaaccgtccctaaactata 18535338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 34594585 - 34594673
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||  ||   | |||||| |||| ||||||||| ||| ||||||||    
T  34594585 cttaattacacttttggtcctcgcattttgactaactcacgaaaattatctcgcatcttttcaatcaaacaaaatcatccctaaactat 34594673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 33880633 - 33880706
Alignment:
Q  112 ttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaa 185  Q
    |||||||||||| |||||||||| ||||| ||||| || || ||||||| ||||||||||||| ||||| ||||    
T  33880633 ttttggtcctcgtattttgaccagctcacaaaaattgttctgcctctttcaaatcgaacaaaaccgtccctaaa 33880706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 35579430 - 35579342
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||||| ||||||| |||||||||||||| || |||||||||||| |  | ||||||| ||||| ||||||| ||||| ||||||||    
T  35579430 gcttaattacacttttgatcctcgcattttgatcagctcacgaaaatgattatgcctctttcaaatcaaacaaaaccgtcc-taaactat 35579342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 37787312 - 37787237
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaa 174  Q
    |||||||||||||||||||||||||  ||||| || |||||||||| |||||||  |||||||||||| ||||||||    
T  37787312 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcct-gctcttttaaatcagaacaaaa 37787237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 180
Target Start/End: Original strand, 35288899 - 35288984
Alignment:
Q  95 atttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaatcgtcc 180  Q
    |||||||||||||| |||||||||| ||| |||||| || |||||||||| ||||||| || |||||||| | ||||||||| ||||    
T  35288899 atttggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaatggtcc 35288984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 5184431 - 5184484
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacc 155  Q
    ||||||| | |||||||||| | |||||||||||||||||||| ||||||||||    
T  5184431 ttaattacatttttggtccttggattttgaccaactcacgaaattggtcctacc 5184484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 35160664 - 35160704
Alignment:
Q  110 acttttggtcctcgcattttgaccaactcacgaaaatggtc 150  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  35160664 acttttggtcctaccattttgaccaactcacgaaaatggtc 35160704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 40669757 - 40669689
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaa 164  Q
    ||||| ||||||| ||||||| ||||  |||||||||||||||||||||||| || ||| | |||||||    
T  40669757 tttggtttaattacacttttgatccttccattttgaccaactcacgaaaatgatcatactttttttaaa 40669689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 33881124 - 33881043
Alignment:
Q  110 acttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa--tcgtccataaactat 189  Q
    ||||||| ||||||||||||||| |  ||||||||||||| ||   | |||| ||||||||||||  |||||||||||||||    
T  33881124 acttttgatcctcgcattttgactagttcacgaaaatggttctgtatgttttcaatcgaacaaaatctcgtccataaactat 33881043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 19590525 - 19590578
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 19590578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 38859186 - 38859133
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  38859186 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 38859133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 5445144 - 5445204
Alignment:
Q  113 tttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaa 173  Q
    ||||||| |||||||||||||||||||| ||| ||||| | ||| ||| |||| |||||||    
T  5445144 tttggtcatcgcattttgaccaactcacaaaactggtcttgcctttttcaaattgaacaaa 5445204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 5454188 - 5454248
Alignment:
Q  113 tttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaa 173  Q
    ||||||| |||||||||||||||||||| ||| ||||| | ||| ||| |||| |||||||    
T  5454188 tttggtcatcgcattttgaccaactcacaaaactggtcttgcctttttcaaattgaacaaa 5454248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 45815566 - 45815523
Alignment:
Q  145 atggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||| || ||||||||||||||||||||||||||| ||||||||    
T  45815566 atggttctgcctcttttaaatcgaacaaaatcgtcc-taaactat 45815523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 15115643 - 15115546
Alignment:
Q  94 aatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15115643 aattaggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaactatat 15115546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 4967317 - 4967224
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  4967317 ggcttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatg 4967224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 15029855 - 15029762
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  15029855 ggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactatatg 15029762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 38900648 - 38900737
Alignment:
Q  103 taattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattatatg 38900737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 4966819 - 4966936
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnngc 201  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| |||||||||||       ||    
T  4966819 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactatatg-tttttagc 4966917  T
Q  202 agttttagtcatatcccct 220  Q
    |||||||||||||||||||    
T  4966918 agttttagtcatatcccct 4966936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 32697771 - 32697679
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||| |||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||    
T  32697771 gcttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactatatg 32697679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 19291353 - 19291487
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnn 195  Q
    ||||||||||||| ||||||||||||   ||||||| |||||||| |||||||||||| || ||||||||||||||||||||||| |||||||||||       
T  19291353 tttggcttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttt 19291452  T
Q  196 nnnngcagttttagtcatatccccttattttcaac 230  Q
        |||||||||||| |||| |||||||| ||||    
T  19291453 ttttgcagttttagtcttatctccttatttccaac 19291487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 28290190 - 28290097
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||||||||    
T  28290190 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactatatg 28290097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 22651857 - 22651767
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| |||||| |||||||||||||||||| |||||||||||||| || ||| ||| ||||||||||||||||||||||||||||    
T  22651857 ggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtccataaactat 22651767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 14340953 - 14340864
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||| | ||||||| || |||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  14340953 ttaattacatttttggtacttgcattttgaccaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaactatat 14340864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 18149733 - 18149826
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||| ||||  ||||| |||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  18149733 ggcttaattacacttttgatcctaccatttggaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 18149826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 21371242 - 21371149
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||| |||| |||||||||||||||||  ||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  21371242 ggcttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactatatg 21371149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 28289684 - 28289777
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||| |||| ||||||    
T  28289684 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatg 28289777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 27307605 - 27307513
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||| ||||||||||| |||||||||||||  ||||||||||||| || ||||||| ||||||||||||| |||||||||||||||||    
T  27307605 gcttaattagacttttggtccccgcattttgaccagttcacgaaaatggttctccctctttcaaatcgaacaaaaccgtccataaactatatg 27307513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 38901189 - 38901093
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||| ||||||||||||  ||||||||| ||  ||||||||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  38901189 tttggcttaattacacttttggtccttccattttgactaaagcacgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaactatatg 38901093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 8419165 - 8419074
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||||| ||||||||||||  |||||||||||||||||||| ||||||||| || |||||||| |||||||||||||| ||||||||||    
T  8419165 gcttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaactatat 8419074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 18150270 - 18150139
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| |||| || |||| | |||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||          
T  18150270 ggcttaattacacttgtgatccttgtattttgacaaactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttt 18150171  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     |||||||||||| |||| || ||||| ||||    
T  18150170 tgcagttttagtcctatctccctatttccaac 18150139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 41834605 - 41834516
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||| | ||||||||||| ||||| ||||||||    
T  41834605 ggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactat 41834516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 16752582 - 16752675
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||||||||  |||||||||||| |||||||||||| || | | ||||| |||||||||||||||||||||||||||||||    
T  16752582 ggcttaattacacttttggtccctgcattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaactatatg 16752675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 17260766 - 17260676
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||  |||||||||||||||||||||||||| ||||||||||| | |||||||||| ||||||||||||| | ||| ||||||||    
T  17260766 ggcttaattgcacttttggtcctcgcattttgaccaattcacgaaaatgattctacctctttcaaatcgaacaaaaccatccctaaactat 17260676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 32305831 - 32305908
Alignment:
Q  112 ttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||| ||||||||||| || ||||||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  32305831 ttttggtcatcgcattttgatcagctcacgaaaattgttctacctcttttaaatcgaacaaaatcgtccctaaactat 32305908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 10721787 - 10721875
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||||| | ||||||||||| ||||||||||| ||||||||||||||| |  |||||| ||||||||||||||||||| ||||||||    
T  10721787 gcttaattacatttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgtcc-taaactat 10721875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 14340401 - 14340478
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtc 179  Q
    ||||||| | ||||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||    
T  14340401 ttaattacatttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 14340478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 20266450 - 20266371
Alignment:
Q  110 acttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||||||| |||||||||| || |||||||||||| |  |||||| ||||||||||||||||||| ||||||||    
T  20266450 acttttggtcctcgtattttgaccagcttacgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaactat 20266371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 5162115 - 5162022
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| | ||||  |||| ||||||||||||||||| || | | ||| ||||||||||||||||||||||||||||| |||| ||||||    
T  5162115 ggcttaattacattttttatccttgcattttgaccaactcatgagattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatg 5162022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 16753114 - 16753045
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaac 170  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||||| || ||||||| |||||||||    
T  16753114 cttaattacatttttggtcatcgcattttgaccaactcacgaaaatggttctgcctctttcaaatcgaac 16753045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 39083383 - 39083450
Alignment:
Q  124 cattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||| || | ||||||||||    
T  39083383 cattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaattgttcttaaactatat 39083450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 13557011 - 13557072
Alignment:
Q  118 tcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtc 179  Q
    ||||||||||||||||| ||||||||||||||| | ||||||| ||||| ||||||||||||    
T  13557011 tcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcaaacaaaatcgtc 13557072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 28495377 - 28495296
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtcc 180  Q
    |||||||||| ||||||||||  |  |||||||||| ||||||||||||||| | ||||||| |||||||||||||| ||||    
T  28495377 ggcttaattacacttttggtctccatattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaattgtcc 28495296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 22651347 - 22651435
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||| | ||||||| |||| |||||||||| |||||| |||||||| | ||||||||||||| ||||||| | ||| ||||||||    
T  22651347 cttaattacatttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaactat 22651435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 28595182 - 28595270
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||  |||||||||||||| |||||||||| || || ||||||||| | | ||||| ||| ||||||||||||||| ||||||||    
T  28595182 cttaattgcacttttggtcctcgtattttgaccagcttacaaaaatggtcatgcttctttcaaaacgaacaaaatcgtccctaaactat 28595270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 177
Target Start/End: Original strand, 20260928 - 20261003
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcg 177  Q
    |||||| |||||||||||||| ||||||||| | |||| |||||||||||  ||||||| ||||| ||||||||||    
T  20260928 ttaattttacttttggtcctcacattttgactagctcatgaaaatggtcccgcctctttcaaatcaaacaaaatcg 20261003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 21370689 - 21370776
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||||| |||| |||||   ||||||||||||| |||||||||||  || || ||||||||||||||||||||||  ||||||||    
T  21370689 ttaattatattttttgtcctactattttgaccaactgacgaaaatggttatatcttttttaaatcgaacaaaatcgtctttaaactat 21370776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 27307061 - 27307150
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| ||||||||| |||||||||||||||||| | |||||||||| |   ||||| |||| |||||||||| ||| ||||||||    
T  27307061 ggcttaattacacttttggttctcgcattttgaccaacttatgaaaatggtcatgtttctttcaaattgaacaaaatcatcc-taaactat 27307150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 174
Target Start/End: Original strand, 28494845 - 28494919
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    ||||||||| ||||||||||||  |||||||||||  ||| ||||||||| || ||||||| |||||||||||||    
T  28494845 gcttaattacacttttggtccttacattttgaccagttcaggaaaatggttctgcctctttcaaatcgaacaaaa 28494919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 152
Target Start/End: Original strand, 164189 - 164244
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||||| ||||||||||||||  |||||||| |||||||||| |||||||    
T  164189 ttggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcct 164244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 25974256 - 25974177
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgacc-----aactcacgaaaatggtcctacctcttttaaatcgaacaaa 173  Q
    |||||||||| |||||||||||||||||||  |||     ||||||||||||||||||| ||| ||| ||||||||||||    
T  25974256 ggcttaattacacttttggtcctcgcatttaaaccaacgtaactcacgaaaatggtcctgcctttttcaaatcgaacaaa 25974177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 4623147 - 4623229
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtcc 180  Q
    ||||||||||| |||||||||| |||  |||||||  |||||||||| ||||||| ||||||| |||  ||||||||| ||||    
T  4623147 tggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtcc 4623229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 24362381 - 24362328
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| |||||||||||||| |||||| || |||||||||| |||||||    
T  24362381 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcct 24362328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 5819481 - 5819421
Alignment:
Q  92 ttaatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||| |||||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  5819481 ttaaattggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 5819421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 25973834 - 25973913
Alignment:
Q  95 atttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    |||||| |||||| || |||| |||||||||||| |||| |||||||||| ||||| | ||| |||  ||||||||||||    
T  25973834 atttggtttaattgtattttttgtcctcgcatttagaccgactcacgaaattggtcatgcctttttcgaatcgaacaaaa 25973913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 8647437 - 8647491
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    ||||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  8647437 tggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 8647491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 2865300 - 2865247
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  2865300 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 2865247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 18183514 - 18183461
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  18183514 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 18183461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 19359681 - 19359628
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  19359681 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 19359628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 24331559 - 24331612
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  |||||| | |||||||||| |||||||    
T  24331559 ggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcct 24331612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 19359135 - 19359211
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    ||||||||||| |||||||||||||   ||||| || |||||||||| ||||||| ||  ||| |||| ||||||||    
T  19359135 tggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaa 19359211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 46737201 - 46737108
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  46737201 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 46737108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 24852010 - 24851919
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  24852010 cttaattatacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 24851919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 192
Target Start/End: Original strand, 34789376 - 34789475
Alignment:
Q  93 taatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  34789376 taatttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 34789475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 28465632 - 28465534
Alignment:
Q  94 aatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  28465632 aatttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 28465534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 236
Target Start/End: Complemental strand, 34789927 - 34789792
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnng 200  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||       |    
T  34789927 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttg 34789828  T
Q  201 cagttttagtcatatccccttattttcaacaccaaa 236  Q
    ||||||||||| |||| || ||||| |||| |||||    
T  34789827 cagttttagtcctatctccctatttccaactccaaa 34789792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 33689829 - 33689922
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  33689829 ggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatg 33689922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 21034233 - 21034366
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnn 196  Q
    |||||||||||| ||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||        
T  21034233 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 21034332  T
Q  197 nnngcagttttagtcatatccccttattttcaac 230  Q
        |||||||||||||||| || ||||| ||||    
T  21034333 tttacagttttagtcatatctccctatttccaac 21034366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 54440573 - 54440661
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  54440573 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 54440661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 19528869 - 19529000
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||||||||||          
T  19528869 ggcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatatgtttttt 19528968  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     |||||||||||| |||| || ||||| ||||    
T  19528969 tgcagttttagtcctatctccctatttccaac 19529000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 55677504 - 55677411
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||    
T  55677504 ggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatg 55677411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 12593569 - 12593477
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||  ||||||||||    
T  12593569 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactatat 12593477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 34807116 - 34807247
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||||          
T  34807116 ggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgtttttt 34807215  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     |||||||||||| |||| || ||||| ||||    
T  34807216 tgcagttttagtcctatctccatatttccaac 34807247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 12593024 - 12593117
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  || |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  12593024 ggcttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactatatg 12593117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 14440374 - 14440281
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||||||||| || ||||||||||||||||||| ||| |||||||||||    
T  14440374 ggcttaattatacttttggtcctaccattttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactatatg 14440281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 45838547 - 45838640
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||| ||| |||||||||||| | ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||    
T  45838547 ggcttatttacacttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 45838640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 21034783 - 21034691
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||||||||| | |||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| | ||||||||    
T  21034783 ggcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatat 21034691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 190
Target Start/End: Complemental strand, 41608966 - 41608870
Alignment:
Q  94 aatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactata 190  Q
    |||| |||||||||| ||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| | |||||||||    
T  41608966 aattaggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcctacctcttttaaatccaacaaaatcgttcttaaactata 41608870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 28465083 - 28465211
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnng 200  Q
    |||||||| |||||| |||||  |||||||||||||| |||||| || |||||||||||||||||||||||||||||||| |||||||||||       |    
T  28465083 cttaattacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactatatg-ttttttg 28465181  T
Q  201 cagttttagtcatatccccttattttcaac 230  Q
    |||||||||||||||| || ||||||||||    
T  28465182 cagttttagtcatatctccctattttcaac 28465211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 35193322 - 35193401
Alignment:
Q  113 tttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  35193322 tttggtcctcgcattttgatcagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatg 35193401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 56077870 - 56077777
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| | ||||||||||  ||||||||||||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||    
T  56077870 ggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatg 56077777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 54441113 - 54441022
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||| ||||||||||||  |||||||| || |||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  54441113 cttaattacacttttggtcctaccattttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 54441022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 36168332 - 36168422
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| ||||||| |||| |||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||||    
T  36168332 ttaattacacttttgctccttgcattttgaccaacccacgaaattggtcttacctcttttaaatcgaacaaaatcgtccttaaattatatg 36168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 26974283 - 26974376
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  |||||| || ||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||    
T  26974283 ggcttaattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 26974376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 216
Target Start/End: Complemental strand, 26974788 - 26974674
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnngc 201  Q
    ||||||| | |||||||||| |||||||||  || |||||||| |||||||||||||||||||||||||||||| |||| |||||||||||       ||    
T  26974788 ttaattacatttttggtccttgcattttgaataattcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttgc 26974689  T
Q  202 agttttagtcatatc 216  Q
    |||||||||||||||    
T  26974688 agttttagtcatatc 26974674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 229702 - 229615
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||| |||||||||| |||||||||||||| ||||||||||||||| | ||||||| ||||| ||||||||||||| ||||||||    
T  229702 ttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactat 229615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 99 - 190
Target Start/End: Original strand, 24851316 - 24851407
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactata 190  Q
    |||||||||| ||||||| ||||  |||||||||||||||||||||||||| ||| || |||||||| |||||||||||||| |||||||||    
T  24851316 ggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtccttaaactata 24851407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 41608377 - 41608456
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtcca 181  Q
    ||||||| |||||||||||| ||||||||| ||||||| |||| ||||| ||||||||||||||||||||||||||||||    
T  41608377 ttaattacacttttggtccttgcattttgatcaactcatgaaattggtcatacctcttttaaatcgaacaaaatcgtcca 41608456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 14439831 - 14439921
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| | |||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||  ||||||||||||| |||||||||||    
T  14439831 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatg 14439921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 17503974 - 17504063
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| |||| ||||| || ||||| ||||||||    
T  17503974 ggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtcc-taaactat 17504063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 30598071 - 30597973
Alignment:
Q  93 taatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||||||| |||| ||||||||||||||  |||||||||||||||| || |||| ||  |||||||||||||||||||||||||| |||| |||||    
T  30598071 taatttggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaattatat 30597973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 41114168 - 41114250
Alignment:
Q  110 acttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||  |||||||||||||||||||||| ||||||| || ||||||||||||||||| ||||| |||||||||||    
T  41114168 acttttggtcctaccattttgaccaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaactatatg 41114250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 45839092 - 45839003
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| ||||||||||||   |||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||    
T  45839092 ttaattacacttttggtcctactattttgaccaactcacgaaa-tggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 45839003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 6617205 - 6617116
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||| | ||||| | || |||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  6617205 ttaattacatttttgctacttgcattttgactaactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 6617116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 28166007 - 28166096
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||| | ||||||||||   ||||||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||    
T  28166007 ttaattaaatttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatat 28166096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 46736655 - 46736748
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||||||||||| ||   |||||||||||||||||||||||||| ||  | |||||||||||||||||| |||| |||||||||||    
T  46736655 ggcttaattatacttttggttctactattttgaccaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaactatatg 46736748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 229164 - 229251
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||| |||||||||||||| |||||||||| ||| ||||||||||| | ||||||| |||| |||||||||||||| ||||||||    
T  229164 ttaattacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactat 229251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 6616675 - 6616765
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| ||||||||| ||  |||||||| |||||||||||||||||| ||  | ||||||||||||||||||||||| |||||||||||    
T  6616675 ttaattacacttttggttctatcattttgatcaactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaactatatg 6616765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 51310051 - 51309961
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||  |||||||||||||||||||| |||| ||||||||||||||| | ||||||| |||||||||||||  |||| ||||||||    
T  51310051 ggcttaattgcacttttggtcctcgcatttttaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaacagtccctaaactat 51309961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 24336307 - 24336234
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    |||||||| ||||||| ||||||||||||||| | ||||||||||||||||| ||||||| |||||||||||||    
T  24336307 cttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaa 24336234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 40160094 - 40160187
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| | ||||| ||| |||||||| |||| ||||||||||| ||| | ||||||||||||||||||||| ||||| |||||||||||    
T  40160094 ggcttaattacatttttgatccccgcattttaaccagctcacgaaaatagtcatgcctcttttaaatcgaacaaaaccgtccctaaactatatg 40160187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 17504480 - 17504412
Alignment:
Q  124 cattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||| || |||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  17504480 cattttgaacagctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaactatatg 17504412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 1397597 - 1397683
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaact 187  Q
    |||||||| ||||||| |||   ||||||||||||||||  |||||||||||| || ||||||||||||||||||||||| ||||||    
T  1397597 cttaattacacttttgatccaaccattttgaccaactcataaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 1397683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 33777635 - 33777725
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| ||||||| ||||  |||||||||||||||||||||||| || ||  | ||| ||||||||||||||||||| |||||||||||    
T  33777635 ttaattacacttttgttcctaccattttgaccaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaactatatg 33777725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 35193848 - 35193759
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| |||||||||||| |||||||||  | ||||||||||||||||| ||||||| ||||| ||||||| ||||| ||||||||    
T  35193848 ggcttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgtcc-taaactat 35193759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 16215038 - 16214949
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||||||||||||||||  |||||||| ||||| ||||||||| || || || |||||||| ||| |||||||||| ||||||||||    
T  16215038 ttaattatacttttggtcctatcattttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactatat 16214949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 23986521 - 23986610
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||||  ||||||||||||| ||||||||||| ||||||||||||||| |  |||||| |||||||||||||  |||| ||||||||    
T  23986521 gcttaatttcacttttggtcctcacattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaactgtccctaaactat 23986610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 189
Target Start/End: Complemental strand, 40160639 - 40160547
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||| ||||||| | |||||||||| |||||||||||||||||||||||| ||| | ||||||| |||| |||||||| ||||| ||||||||    
T  40160639 tttggtttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtcc-taaactat 40160547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 33778161 - 33778065
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||| |||||||| |||||| || ||  ||||||||| |||||||||||||| | |||||||||||||||| ||||||||||| | |||| ||||||    
T  33778161 tttgacttaattacacttttcgttctaccattttgactaactcacgaaaatgattctacctcttttaaatcaaacaaaatcgttcctaaattatatg 33778065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 35643580 - 35643648
Alignment:
Q  124 cattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||||||||||||||||||||| || ||| |||| ||| |||||||||| |||||||||||    
T  35643580 cattttgaccaactcacgaaaatggtcctatctttttaaaattgaataaaatcgtccttaaactatatg 35643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 35644106 - 35644042
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaat 165  Q
    |||||||| |||||||||||| ||||||||||||||||||||||  |||| ||||||||||||||    
T  35644106 cttaattacacttttggtccttgcattttgaccaactcacgaaataggtcatacctcttttaaat 35644042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 24335761 - 24335836
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    |||||||||| ||||| | |||| |||||||||||| ||||||||||||||| | ||||||| |||||||||||||    
T  24335761 ggcttaattacactttcgatccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaa 24335836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 10795854 - 10795777
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtc 179  Q
    ||||||| ||||||| ||| |||||||||| || ||||||||| |||||||  |||||| ||||||||||||||||||    
T  10795854 ttaattacacttttgatccccgcattttgaacagctcacgaaattggtcctctctctttcaaatcgaacaaaatcgtc 10795777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 18965141 - 18965230
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||||| | ||||| ||||| |||||| ||  ||||||||||| |||| | ||||||| ||||||||||||||||||| ||||||||    
T  18965141 gcttaattacatttttgatcctcacattttaacttactcacgaaaacggtcttgcctctttcaaatcgaacaaaatcgtccttaaactat 18965230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 19529240 - 19529147
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||| ||||  |||||||||||||| |  |||||| | ||| ||||||||||| |||||||||||||  |||||||||||    
T  19529240 ggcttaattacacttttgctcctaccattttgaccaacttataaaaatgattctatctcttttaaattgaacaaaatcgtctttaaactatatg 19529147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 36168877 - 36168801
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaat 175  Q
    |||||||||| ||| ||||||||  |||||||||||||||||||||||| |||||  | |||||||| |||||||||    
T  36168877 ggcttaattacactcttggtcctaccattttgaccaactcacgaaaatgatcctattttttttaaatagaacaaaat 36168801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 44219377 - 44219448
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaa 172  Q
    |||||||| |||||||||||||| ||||| |||||||||||||| |||||||  || |||||||| ||||||    
T  44219377 cttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcctctcttttttaaattgaacaa 44219448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 34807682 - 34807592
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||| |||||||| |   ||||||| ||||||||||||||  | ||| || |||||| |||||||||||||||| |||||||||||    
T  34807682 ttaattatatttttggtcttattattttgatcaactcacgaaaattattctatcttttttaattcgaacaaaatcgtccttaaactatatg 34807592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 44892701 - 44892643
Alignment:
Q  91 tttaatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggt 149  Q
    |||||||  ||||||||||| ||||||||||||  |||||||| |||||||||||||||    
T  44892701 tttaattaagcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggt 44892643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 11153695 - 11153639
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    ||||||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  11153695 tttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 11153639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 20958403 - 20958351
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    ||||||||| |||||| ||||||| |||||| || ||||||||||||||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcct 20958351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 37336693 - 37336649
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaa 144  Q
    |||||||| || |||||||||||||||||| ||||||||||||||    
T  37336693 gcttaattgtatttttggtcctcgcattttaaccaactcacgaaa 37336649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 51641374 - 51641302
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaa 173  Q
    |||||||| |||||| ||||| |||||| ||| ||||||||||| || |||| ||| ||||||||| ||||||    
T  51641374 cttaattacacttttagtccttgcatttagacaaactcacgaaattgatcctgccttttttaaatcaaacaaa 51641302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 16691618 - 16691555
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttt 160  Q
    |||||||||||| ||||||| |||  |  |||||||| |||||||||||||||||| |||||||    
T  16691618 ttggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctcttt 16691555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 31297224 - 31297161
Alignment:
Q  110 acttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaa 173  Q
    ||||||||| |||| ||||  |||||||||||||| ||||| | ||| ||||||||||||||||    
T  31297224 acttttggttctcgtatttaaaccaactcacgaaattggtcatgccttttttaaatcgaacaaa 31297161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 51309667 - 51309742
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    ||||||||| ||||||||||||||| ||||| |  | |||||||||||| || | | ||||| |||||||||||||    
T  51309667 ggcttaattgtacttttggtcctcgtatttttattagctcacgaaaatgatcatgcgtctttcaaatcgaacaaaa 51309742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 51640963 - 51641034
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaa 173  Q
    ||||||| | |||||||  |||| ||| ||||||||||| ||| ||||||| ||| ||||||||||||||||    
T  51640963 ttaattacatttttggttttcgcttttagaccaactcacaaaattggtcctgccttttttaaatcgaacaaa 51641034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 12234875 - 12234829
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaa 144  Q
    ||||||||||||||||||||||||||  ||||| || ||||||||||    
T  12234875 tggcttaattatacttttggtcctcgtgttttggcctactcacgaaa 12234829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 46193404 - 46193458
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    ||||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  46193404 tggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 46193458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 15523235 - 15523288
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  15523235 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 15523288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 23494988 - 23494935
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  23494988 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 23494935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 22434176 - 22434232
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    ||||||||||||| ||||||||||||||  ||||| |  |||||||||| |||||||    
T  22434176 tttggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcct 22434232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 7e-36; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 39485054 - 39485158
Alignment:
Q  88 acatttaatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaact 187  Q
    |||||||||| || ||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  39485054 acatttaattaggtttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaact 39485153  T
Q  188 atatg 192  Q
    |||||    
T  39485154 atatg 39485158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 17641912 - 17641825
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  17641912 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactat 17641825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 50304441 - 50304532
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||    
T  50304441 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaactatatg 50304532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 2868254 - 2868124
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||          
T  2868254 ggcttaattacacttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactatatg-ttttt 2868156  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     |||||||||||||||||||| ||||| ||||    
T  2868155 tgcagttttagtcatatccccctatttccaac 2868124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 29438930 - 29439019
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaacta 188  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  29438930 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 29439019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 10278550 - 10278641
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||| |||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  10278550 cttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 10278641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 30786771 - 30786865
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaat-ggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  30786771 ggcttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 30786865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 45048158 - 45048248
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  45048158 ttaattacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactatatg 45048248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 37505067 - 37505204
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| |||||||||||          
T  37505067 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 37505166  T
Q  199 ngcagttttagtcatatccccttattttcaacaccaaa 236  Q
     |||||||||||| |||  || |||||||||| |||||    
T  37505167 tgcagttttagtcctatttccctattttcaactccaaa 37505204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 23340180 - 23340313
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnn 195  Q
    ||||||||||||| ||||||| || | |||||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||||||        
T  23340180 tttggcttaattacacttttgatcattgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgctcataaactatat-att 23340278  T
Q  196 nnnngcagttttagtcatatccccttattttcaac 230  Q
        ||||||||||||||||| |||||||| ||||    
T  23340279 ttttgcagttttagtcatatctccttatttccaac 23340313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 34555379 - 34555472
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||||||||| |||||||||| ||||| ||||| |||| |||||||||||||||||||||||||||||| |||||||||||    
T  34555379 ggcttaattacacttttggtccttgcattttgactaactcgcgaaattggtgctacctcttttaaatcgaacaaaatcgtccctaaactatatg 34555472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 16298683 - 16298775
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||| | |||||| ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  16298683 gcttaattacatttttggcccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg 16298775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 44954771 - 44954679
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| || ||||| ||||||||| ||||||||| |||||||||||||||    
T  44954771 gcttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactatatg 44954679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 444099 - 444004
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||||||||||| || | |||||||||||||||||||||| | ||| ||||||||||||||||||||||||||| | |||||||||||    
T  444099 ttggcttaattatacttttgatctttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaactatatg 444004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 9992703 - 9992608
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||| |||||||||||| |||||||||| |||||| ||||||||||||| || ||||||||||||||||||||| | |||||||||||    
T  9992703 ttggcttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaactatatg 9992608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 34555926 - 34555835
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||| |||||| |||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  34555926 cttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 34555835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 230
Target Start/End: Complemental strand, 8230184 - 8230057
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnnngc 201  Q
    ||||||| | ||||||| |||||||||||||| | |||||||||||||  ||||||||||||||||||||||||||||| |||||||||||       ||    
T  8230184 ttaattacatttttggttctcgcattttgacctattcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttgc 8230086  T
Q  202 agttttagtcatatccccttattttcaac 230  Q
    |||||||||||||||||| ||||| ||||    
T  8230085 agttttagtcatatccccctatttccaac 8230057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 10279094 - 10279000
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||| ||||||| ||||  | |||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  10279094 tggcttaattacacttttgatcctaccgttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 10279000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 37421163 - 37421253
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| |||||||||| | ||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  37421163 ttaattacacttttggtctttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatg 37421253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 1837505 - 1837635
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||| || || || ||||||||||||||||||||| |||| |||||||||||          
T  1837505 ggcttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactatatg-ttttt 1837603  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     ||||||||||||||||| || ||||||||||    
T  1837604 tgcagttttagtcatatctccctattttcaac 1837635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 52336056 - 52335964
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||||||  |||||||| ||  |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  52336056 ggcttaattactcttttggttctatcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 52335964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 44582059 - 44582150
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||| ||||||||||||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||  |||| ||||||    
T  44582059 cttaattacacttttggtccttacattttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaattatatg 44582150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 96 - 236
Target Start/End: Complemental strand, 37505616 - 37505478
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnn 195  Q
    ||||||||||||||| ||||||||||   |||||||||||||||||||| || || || |||||||||| | |||||||||||||||||||||||||       
T  37505616 tttggcttaattatatttttggtccttttattttgaccaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaactatatg--t 37505519  T
Q  196 nnnngcagttttagtcatatccccttattttcaacaccaaa 236  Q
        |||||||||||| |||| || |||||||||| |||||    
T  37505518 ttttgcagttttagtcctatctccctattttcaactccaaa 37505478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 4080021 - 4080114
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||| ||||| |||||||||||| |||| ||||||||||||||||| || || ||||| ||||||||||||||||||||||| |||||||||||    
T  4080021 ggctcaattacacttttggtccttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaactatatg 4080114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 23526659 - 23526748
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||| ||| ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| || |||||    
T  23526659 gcttagttacacttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcatccctagactat 23526748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 2867913 - 2868004
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||| || || ||||||||||||||||||||| |||  |||||||||||    
T  2867913 cttaattacaattttggtcatcgcattttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaactatatg 2868004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 9992149 - 9992248
Alignment:
Q  94 aatttggcttaattatacttttggtcctcgcatttt-gaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||| |||||||||| ||||||||||||  |||||| |||||||||||| ||||||||||| || |||||||||||||||||| |||| |||||||||||    
T  9992149 aattaggcttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactatatg 9992248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 96 - 191
Target Start/End: Complemental strand, 50305334 - 50305239
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||| ||||||| ||||||||| ||  |||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  50305334 tttggtttaattacacttttggttctaccattttaaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 50305239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 21938566 - 21938656
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| |||||||||| |  |||||||| ||||||||||||||| || || || |||||||||||||||||||||||||||||||||||    
T  21938566 ttaattacacttttggtcttaccattttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactatatg 21938656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 50926787 - 50926697
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||||||||||   |||||| ||||||||||||| ||||| ||||||||    
T  50926787 ggcttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaactat 50926697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 8229637 - 8229730
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||| ||||| |||||||| ||||||||||||||| | |||| |||||||||||||| |||||||||  |||||||||||    
T  8229637 ggcttaattacacttttgatcctcacattttgatcaactcacgaaaatgattctacatcttttaaatcgaataaaatcgtctctaaactatatg 8229730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 17088690 - 17088593
Alignment:
Q  94 aatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    |||| |||||||||| ||||||||||||| |||||||| || ||||||||||||||| | ||||||| ||||| ||||||| ||||| ||||||||||    
T  17088690 aattaggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaactatat 17088593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 44291298 - 44291391
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||| |||||||  ||||||||||||| ||||||||||| ||||||||||||||  | ||||||| |||| |||||||||||||||||||||||    
T  44291298 tttgacttaattgcacttttggtcctcacattttgaccagctcacgaaaatggttatgcctctttcaaattgaacaaaatcgtccataaactat 44291391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 25274753 - 25274845
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaacta 188  Q
    |||||| |||||  ||||||||||||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||| ||| | |||||||    
T  25274753 tttggcataattgcacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcctaaacta 25274845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 50926232 - 50926320
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||| | ||||||||||| ||||||||||| |||||||||||  || ||||||||| ||||||||||||||||||| ||||||||    
T  50926232 cttaattacagttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaactat 50926320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 37421488 - 37421397
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtccta-cctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| |||||| ||| |  |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||| |||||||||||    
T  37421488 ttaattacacttttagtcataccattttgaccaactcacgaaaatggtcctatctttttttaaatcgaacaaaatcgtccttaaactatatg 37421397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 45048678 - 45048592
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||| |||||||||||||||||||||||||  |||||||||||||| |||||||||  |||||||||||| ||||| ||||||||    
T  45048678 ttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgtcc-taaactat 45048592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 29021411 - 29021325
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaa 185  Q
    |||||||||  ||||||||||||| ||||||||||| |||||||||||| || | ||||||| ||||||||||||||||||| ||||    
T  29021411 ggcttaattgcacttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaa 29021325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 29439457 - 29439375
Alignment:
Q  110 acttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||   |||||||| ||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||    
T  29439457 acttttggtcccaccattttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 29439375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 30787349 - 30787251
Alignment:
Q  94 aatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||| |||||||||| ||||||| ||||  ||||| || |||||||||||||||||| || || ||| ||||||||||||||||||| |||||||||||    
T  30787349 aattaggcttaattacacttttgatcctaccatttagatcaactcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaactatatg 30787251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 44802717 - 44802627
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||| ||||| | ||||||| |||  |||||||||||||| ||||||||    
T  44802717 ggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactat 44802627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 9833699 - 9833612
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaa 185  Q
    |||||||||| |||||||| |||| | | |||||||||||||||||||| ||| | ||||||| ||||||||||||||||||| ||||    
T  9833699 tggcttaattgtacttttgatccttgtactttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaa 9833612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 17088146 - 17088235
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| ||| |||||| |||||||||||||| ||||||||||||||  | ||||||| ||||||||||||| ||||| ||||||||    
T  17088146 ggcttaattacactgttggtcatcgcattttgaccagctcacgaaaatggttttgcctctttcaaatcgaacaaaaccgtcc-taaactat 17088235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 44954229 - 44954319
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| | |||| |||| | ||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||  |||| ||||||    
T  44954229 ttaattacattttttgtccacccattttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtctttaaattatatg 44954319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 16299227 - 16299135
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||||||| |||||  |||||||| |||||| ||||||||||||||  | |||| ||| |||||||||||||| |||||||||||    
T  16299227 ggcttaattatactttttgtcctaccattttgatcaactcgcgaaaatggtccta-ttttttttaattgaacaaaatcgtccttaaactatatg 16299135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 23527074 - 23526986
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||||||||| ||||| |||||||| || |||| |||||||||| | ||| ||||||||||||||||| ||||  ||||||||    
T  23527074 cttaattatacttttgatcctcacattttgatcagctcatgaaaatggtcatgccttttttaaatcgaacaaaaccgtctctaaactat 23526986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 44582603 - 44582512
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||| ||||||||| ||  |||||||| |||||||||||||||||| || |  ||| ||||||||||||||||||  |||||||||||    
T  44582603 cttaattacacttttggttctaccattttgatcaactcacgaaaatggtcatatcattttcaaatcgaacaaaatcgtctttaaactatatg 44582512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 48173748 - 48173826
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcg 177  Q
    ||||||||| ||| |||||||| |||||||||||||  |||| |||||||| || ||||||| ||||||||||||||||    
T  48173748 ggcttaattgtacctttggtccacgcattttgaccagttcacaaaaatggttctgcctctttcaaatcgaacaaaatcg 48173826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 39843570 - 39843497
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaa 172  Q
    ||||| |||| ||||| ||||||||||||| ||||||||||||||| ||||||| ||| ||| |||||||||||    
T  39843570 ggctttattacactttcggtcctcgcatttagaccaactcacgaaattggtcctgcctttttcaaatcgaacaa 39843497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 39485584 - 39485509
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    |||||||||||||||||| |||||||||||| | || |||| ||||||||| || ||||||| ||||| |||||||    
T  39485584 ggcttaattatacttttgatcctcgcattttaatcagctcatgaaaatggttctgcctctttcaaatcaaacaaaa 39485509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 50419806 - 50419731
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    |||||||||  |||||||||| |||||||| ||||||||||||||| ||||||| ||| ||| |||| ||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaa 50419731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 36228793 - 36228868
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    |||||||||  ||||||| ||||| |||||| | || ||||| ||||||||| |||||||||||||| ||||||||    
T  36228793 ggcttaattgcacttttgatcctcacattttaatcagctcacaaaaatggtcttacctcttttaaattgaacaaaa 36228868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 6224700 - 6224789
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatat 191  Q
    ||||||| | ||||| ||||  ||||||||||||||||  |||||||| ||   | ||||||||||||||||||||||| |||| |||||    
T  6224700 ttaattacatttttgatcctatcattttgaccaactcataaaaatggttcttgtttttttaaatcgaacaaaatcgtccttaaattatat 6224789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 17641403 - 17641456
Alignment:
Q  137 tcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactata 190  Q
    |||||||||||||| ||||| |||||||||||||||||| || | |||||||||    
T  17641403 tcacgaaaatggtcataccttttttaaatcgaacaaaattgttcttaaactata 17641456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 50970278 - 50970353
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaa 174  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||  |||||||||||| ||||||||    
T  50970278 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct-gctcttttaaatcagaacaaaa 50970353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 15646192 - 15646243
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtc 150  Q
    |||||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  15646192 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtc 15646243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 44291844 - 44291777
Alignment:
Q  112 ttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtc 179  Q
    |||| ||||| | |||||||||| |||| |||||||||| |  ||||||||||||||| |||||||||    
T  44291844 ttttagtccttgtattttgaccagctcatgaaaatggtcatgtctcttttaaatcgaataaaatcgtc 44291777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 50419401 - 50419464
Alignment:
Q  110 acttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaa 173  Q
    |||||||||||||||||||  |||||||||| ||||||||| |  || ||| ||||||||||||    
T  50419401 acttttggtcctcgcatttaaaccaactcacaaaaatggtcatgtctttttcaaatcgaacaaa 50419464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 29307488 - 29307434
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    ||||||||||  ||||||||||||||  |||||||| |||||||||| |||||||    
T  29307488 tggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcct 29307434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 5540363 - 5540310
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  5540363 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 5540310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 15646740 - 15646676
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaa 164  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| || ||||||| ||||||||    
T  15646740 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacc-cttttaaa 15646676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 29020877 - 29020966
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaa 185  Q
    ||||||||||||  || | ||||| ||| ||||||| || ||||  ||||||||| |  |||||||||||||||||||||| ||| ||||    
T  29020877 tttggcttaattgcacatatggtcttcgtattttgatcagctcataaaaatggtcatgtctcttttaaatcgaacaaaatcatccttaaa 29020966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 39154565 - 39154512
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  39154565 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 39154512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 52268290 - 52268343
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| |||||||||||||| |||||| ||  ||||||||| |||||||    
T  52268290 ggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcct 52268343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 5539817 - 5539869
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    ||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 5539869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 8678542 - 8678594
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    ||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 8678594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 8679089 - 8679033
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    ||||||||||||| ||||||||||||||  ||||| || ||||||| || |||||||    
T  8679089 tttggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcct 8679033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 29870167 - 29870111
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    ||||||||||||| ||||||||||||||  ||||| || ||||| |||| |||||||    
T  29870167 tttggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcct 29870111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 33144467 - 33144411
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||| |||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  33144467 tttgacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 33144411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 48174242 - 48174178
Alignment:
Q  125 attttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||| || |||||||||| ||| ||  |||||||||||| ||||||| ||||| ||||||||    
T  48174242 attttgatcagctcacgaaaacggttctgtctcttttaaatcaaacaaaaccgtccctaaactat 48174178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 225
Target Start/End: Original strand, 46266 - 46392
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||  |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||||||||||          
T  46266 ggcttaattgcacttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttt 46365  T
Q  199 ngcagttttagtcatatccccttattt 225  Q
     ||||||||||||||||| || |||||    
T  46366 tgcagttttagtcatatctccctattt 46392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 46814 - 46721
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||  |||||||||||    
T  46814 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtctttaaactatatg 46721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 5e-34; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 31574271 - 31574141
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgnnnnnn 198  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||| |||||||||||          
T  31574271 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttt 31574173  T
Q  199 ngcagttttagtcatatccccttattttcaac 230  Q
     ||||||||||||||||| || ||||||||||    
T  31574172 tgcagttttagtcatatctccctattttcaac 31574141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 5121015 - 5120922
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||    
T  5121015 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 5120922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 24640728 - 24640638
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  24640728 ttaattatacttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 24640638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 31073689 - 31073595
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||| |||||||||||| |||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||| |||||||||||    
T  31073689 tggcttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatg 31073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 25468852 - 25468942
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||| ||||||||||||  ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||| |||||||||||    
T  25468852 ttaattacacttttggtccttacattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactatatg 25468942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 25472560 - 25472466
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||| ||||||| ||||  ||||||||||||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||    
T  25472560 tggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatg 25472466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 35163733 - 35163640
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||||||| ||||||||||||| |||||||||||||| || ||||||| ||||| ||||||||||||| |||||||||||    
T  35163733 ggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaactatatg 35163640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 5114468 - 5114561
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| | ||||| ||||  |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  5114468 ggcttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 5114561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 28636284 - 28636385
Alignment:
Q  91 tttaatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactata 190  Q
    ||||| |||||||||||| | |||||||| | | |||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| | |||||||||    
T  28636284 tttaaattggcttaattacatttttggtcattgtattttgaccaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaactata 28636383  T
Q  191 tg 192  Q
    ||    
T  28636384 tg 28636385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 31573720 - 31573814
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtccta-cctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| ||||||   | ||||||||||||||||||||| | |||||||||||    
T  31573720 ggcttaattatacttttggtcctaccattttgaccaactcacgaaaatagtcctatttttttttaaatcgaacaaaatcgttcttaaactatatg 31573814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 32836545 - 32836449
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||||| |||||| ||||| |||||||||||| ||||||||||||||| | ||||||| ||||||||||||| ||| | |||||| ||||    
T  32836545 tttggcttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgtatg 32836449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 22534273 - 22534217
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  22534273 tttggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcct 22534217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 31073142 - 31073222
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgt 178  Q
    ||||||||||| ||||||||||||   |||||||||||| || ||||||||||||| || |||||||||||||||||||||    
T  31073142 tggcttaattacacttttggtcctttaattttgaccaacacatgaaaatggtcctatcttttttaaatcgaacaaaatcgt 31073222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 30251238 - 30251148
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| ||||||| ||||   |||||||||||||||| ||||| ||| || || ||||||||||||||||||||||| ||||||||    
T  30251238 ggcttaattacacttttgatcctactattttgaccaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaactat 30251148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 29891080 - 29891173
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    |||||||||| ||||||| ||||  ||||||||| |||| |||||| || || ||||||||||||| ||||||||| ||||| |||||||||||    
T  29891080 ggcttaattacacttttgttccttacattttgactaacttacgaaattgatcatacctcttttaaaccgaacaaaagcgtccctaaactatatg 29891173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 31242809 - 31242878
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaaca 171  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  31242809 ttaattacacttttgaccctcgcattttgaccaactcacgaaaatgatcctgccttttttaaatcgaaca 31242878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 835771 - 835695
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaat 175  Q
    |||||||||  |||||||||||||||||||| | || || |||||||||||||| ||||||| ||||||||||||||    
T  835771 ggcttaattgcacttttggtcctcgcatttttagcagcttacgaaaatggtcctgcctctttcaaatcgaacaaaat 835695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 33095716 - 33095804
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||  |||||||||||||||||||| | || ||| |||||||||||  |||||||| ||||||||||||| ||||| ||||||||    
T  33095716 cttaattgcacttttggtcctcgcatttttatcagctcgcgaaaatggtctcacctctttcaaatcgaacaaaaccgtccctaaactat 33095804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 835389 - 835484
Alignment:
Q  94 aatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||| |||||||||  ||||||||||||| |||||| | || ||||||||||||||| | ||||||| |||||||||||||  |||| ||||||||    
T  835389 aattaggcttaattgcacttttggtcctcacatttttagcagctcacgaaaatggtcttgcctctttcaaatcgaacaaaactgtccctaaactat 835484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 32836010 - 32836096
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||| ||||||| |||| |||||||||||| ||||| |||| |||||| ||||||| ||||||||||||| ||||| ||||||||    
T  32836010 ttaattacacttttgatccttgcattttgaccagctcacaaaaacggtcctgcctctttcaaatcgaacaaaaccgtcc-taaactat 32836096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 35163187 - 35163273
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||| |||||| |||||||||||||||||| ||||| ||||||||| |  |||||| ||||||||||||| ||||| ||||||||    
T  35163187 ttaattacacttttagtcctcgcattttgaccagctcacaaaaatggtcttgtctctttcaaatcgaacaaaaccgtcc-taaactat 35163273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 152
Target Start/End: Complemental strand, 18257684 - 18257629
Alignment:
Q  97 ttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||||||||||||||||||||  |||||||| |||||||||| |||||||    
T  18257684 ttggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcct 18257629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 30250722 - 30250775
Alignment:
Q  100 gcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtccta 153  Q
    ||||||||| | |||||||||| |||||||||||||||||||||| ||||||||    
T  30250722 gcttaattacaattttggtccttgcattttgaccaactcacgaaattggtccta 30250775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 3835268 - 3835190
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtcc 180  Q
    ||||||| |||||||||||  |  |||||||| |||||||||||||||||| ||||||| |||  ||||||||| ||||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcc 3835190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 10900478 - 10900424
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtc 150  Q
    ||||||||||||| |||||||||||||| |||||| || |||||||||| |||||    
T  10900478 tttggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtc 10900424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 33096160 - 33096082
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    ||||||||||||  ||||||| || ||||||||| |||| |||| |||||||||| |  |||||| |||||||||||||    
T  33096160 tttggcttaattgcacttttgttcttcgcatttttaccagctcatgaaaatggtcatgtctctttcaaatcgaacaaaa 33096082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 28472637 - 28472690
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| ||||||||||||| |||||||    
T  28472637 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcct 28472690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 29859826 - 29859879
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| ||||||||||||| |||||||    
T  29859826 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcct 29859879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 29891630 - 29891577
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||  |||||||||||||||  ||||||||||||    
T  29891630 ggcttaattacacttttggtcctaccattttgaccaactcgtgaaaatggtcct 29891577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 11445532 - 11445457
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| ||||||| ||| ||| |||  ||||||||    
T  11445532 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaa 11445457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 23073999 - 23074074
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| ||||||| ||  ||| |||| ||||||||    
T  23073999 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaa 23074074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 20741100 - 20741181
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaatcgtcc 180  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| ||||||| || |||||||| | ||||||||| ||||    
T  20741100 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaatggtcc 20741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 11277135 - 11277074
Alignment:
Q  91 tttaatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||| ||||||||||||| ||||||||||||||  ||||| |  |||||||||| |||||||    
T  11277135 tttattttggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcct 11277074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 12935157 - 12935210
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  12935157 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 12935210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 15828186 - 15828122
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaa 164  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| ||||| |||| ||||||||    
T  15828186 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacc-cttttaaa 15828122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 22219898 - 22219845
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcct 152  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||| |||||||    
T  22219898 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 22219845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 18504922 - 18504994
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    ||||||| ||||||||||||||  ||||| || |||||||||| ||||||| ||| ||| |||  ||||||||    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaa 18504994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 210883 - 210793
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||||| ||||||||||||| |||||||||||||||| |||||||||||| ||||||| ||||||||||||| ||||| ||||||||    
T  210883 ggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactat 210793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 205911 - 205823
Alignment:
Q  101 cttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    |||||||| |||||| |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||| ||||||||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactat 205823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 204931 - 205018
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||| |||||||||||| | |||||||||| |||||||  |||||||| ||||||| ||||| |||||||| |||| ||||||||    
T  204931 ttaattacacttttggtccttgtattttgaccagctcacgactatggtccttcctctttcaaatcaaacaaaattgtccctaaactat 205018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 205361 - 205448
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||| ||||||| |||| | |||||||||| |||||||  |||||||| ||||||| |||||||||||| | |||| ||||||||    
T  205361 ttaattacacttttgatccttgtattttgaccagctcacgactatggtccttcctctttcaaatcgaacaaatttgtccctaaactat 205448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 617 - 518
Alignment:
Q  93 taatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||| |||||||||| ||||||| ||||||||||||||| | ||||||||||||||| | ||||||| |||||||||||||  |||  |||||||||||    
T  617 taattaggcttaattacacttttgatcctcgcattttgacgagctcacgaaaatggtcttgcctctttcaaatcgaacaaaacagtctctaaactatatg 518  T

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Target: scaffold0712 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 6391 - 6485
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||  ||||||||||||  |||||||| ||||||| ||||||||| ||| || ||||||||||||||||||||||| |||| ||||||    
T  6391 tggcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatg 6485  T

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Target: scaffold0712; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 188
Target Start/End: Complemental strand, 6939 - 6853
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaacta 188  Q
    |||||||  ||||||||||| ||||||||||||| | |||||| ||||| ||| ||||||||||||||||||||||| | |||||||    
T  6939 ttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaacta 6853  T

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Target: scaffold0709 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 6409 - 6503
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 192  Q
    ||||||||||  ||||||||||||  |||||||| ||||||| ||||||||| ||| || ||||||||||||||||||||||| |||| ||||||    
T  6409 tggcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatg 6503  T

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Target: scaffold0709; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 188
Target Start/End: Complemental strand, 6957 - 6871
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaacta 188  Q
    |||||||  ||||||||||| ||||||||||||| | |||||| ||||| ||| ||||||||||||||||||||||| | |||||||    
T  6957 ttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaacta 6871  T

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Target: scaffold0108 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 15113 - 15188
Alignment:
Q  99 ggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaa 174  Q
    ||||||||||||||||||||| |||||||||||||| ||| |||||||| | || ||||||| |||||||||||||    
T  15113 ggcttaattatacttttggtcatcgcattttgaccagctcgcgaaaatgattctgcctctttcaaatcgaacaaaa 15188  T

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Target: scaffold0108; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 15645 - 15554
Alignment:
Q  98 tggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||||||| | ||||||| |||||||||||| || |||||||||||||||||  |||||| |||||||||||||  |||| ||||||||    
T  15645 tggcttaattagatttttggttctcgcattttgatcagctcacgaaaatggtcctgactctttcaaatcgaacaaaactgtccctaaactat 15554  T

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Target: scaffold0021 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 159032 - 159099
Alignment:
Q  112 ttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtc 179  Q
    ||||| |||||||||||| |||| |||||||||||| |||| ||||||| ||||||||||||| ||||    
T  159032 ttttgatcctcgcatttttaccagctcacgaaaatgatcctgcctctttcaaatcgaacaaaaccgtc 159099  T

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Target: scaffold0021; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 159390 - 159337
Alignment:
Q  136 ctcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 189  Q
    ||||||||||||||| |  |||||| ||||||||||||||||| ||||||||||    
T  159390 ctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcgttcataaactat 159337  T

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Target: scaffold0173 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 6615 - 6553
Alignment:
Q  110 acttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaa 173  Q
    |||||| |||||||||||||||||||||| ||||| ||||||| ||| ||| ||||||| ||||    
T  6615 acttttagtcctcgcattttgaccaactcgcgaaactggtcctgcct-tttcaaatcgagcaaa 6553  T

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Target: scaffold0295 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 4786 - 4844
Alignment:
Q  92 ttaatttggcttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtc 150  Q
    |||||| |||||||||| ||||||||||||||  ||||| || |||||||||| |||||    
T  4786 ttaattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 4844  T

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Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 62000 - 61926
Alignment:
Q  102 ttaattatacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatc 176  Q
    ||||||| ||||||| ||||||  |||||  | |||||||||||||||||||||  ||| |||| ||||||||||    
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatc 61926  T

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Target: scaffold0176 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 19169 - 19121
Alignment:
Q  96 tttggcttaattatacttttggtcctcgcattttgaccaactcacgaaa 144  Q
    ||||||||||||| ||||||||||||||  ||||| || ||||||||||    
T  19169 tttggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 19121  T

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