View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5654_1D_low_52 (Length: 236)
Name: NF5654_1D_low_52
Description: NF5654_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5654_1D_low_52 |
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Alignment Details
Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 12355271 - 12355218
Alignment:
| Q |
10 |
tggacatcaacaatctggtagaaaataggtggttctatgtcgtctaccttattg |
63 |
Q |
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| T |
12355271 |
tggacttcaataatctggtagaaaataggtggttctatgccgtctaccttattg |
12355218 |
T |
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