View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5654_1D_low_57 (Length: 227)

Name: NF5654_1D_low_57
Description: NF5654_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5654_1D_low_57
NF5654_1D_low_57
[»] chr6 (24 HSPs)
chr6 (9-192)||(29622698-29622881)
chr6 (9-192)||(6926422-6926605)
chr6 (9-192)||(31090569-31090752)
chr6 (9-192)||(8525825-8526008)
chr6 (9-192)||(13444556-13444739)
chr6 (9-180)||(34085081-34085251)
chr6 (9-178)||(5715473-5715641)
chr6 (9-180)||(11368157-11368328)
chr6 (9-192)||(29880749-29880931)
chr6 (9-190)||(18024711-18024891)
chr6 (25-171)||(7082095-7082242)
chr6 (25-171)||(8810114-8810261)
chr6 (53-150)||(6675257-6675354)
chr6 (42-154)||(17314879-17314992)
chr6 (42-137)||(26947207-26947302)
chr6 (9-120)||(32173021-32173139)
chr6 (42-106)||(14253149-14253214)
chr6 (78-146)||(18894301-18894369)
chr6 (79-146)||(6167446-6167513)
chr6 (78-146)||(3095103-3095171)
chr6 (78-138)||(13889504-13889564)
chr6 (78-138)||(25332347-25332407)
chr6 (78-146)||(29121813-29121881)
chr6 (78-146)||(29629960-29630028)
[»] chr2 (34 HSPs)
chr2 (9-192)||(7721833-7722016)
chr2 (9-190)||(44456141-44456322)
chr2 (9-171)||(8034060-8034222)
chr2 (9-191)||(10522226-10522407)
chr2 (9-192)||(4072689-4072872)
chr2 (9-180)||(4330829-4331000)
chr2 (9-180)||(13479765-13479936)
chr2 (9-192)||(16312920-16313103)
chr2 (9-192)||(26171715-26171898)
chr2 (9-180)||(38628364-38628535)
chr2 (10-192)||(31568987-31569168)
chr2 (9-180)||(31639830-31640002)
chr2 (9-113)||(40658596-40658700)
chr2 (9-113)||(45442956-45443063)
chr2 (42-134)||(35006299-35006392)
chr2 (10-120)||(44799325-44799438)
chr2 (78-146)||(1482423-1482491)
chr2 (78-146)||(1520775-1520843)
chr2 (78-146)||(2390128-2390196)
chr2 (78-146)||(3178797-3178865)
chr2 (78-146)||(10639293-10639361)
chr2 (78-146)||(13195648-13195716)
chr2 (78-146)||(21658477-21658545)
chr2 (78-146)||(27980399-27980467)
chr2 (78-146)||(34202861-34202929)
chr2 (78-146)||(37094620-37094688)
chr2 (78-146)||(39697273-39697341)
chr2 (78-146)||(40811183-40811251)
chr2 (78-146)||(42343518-42343586)
chr2 (78-146)||(43577489-43577557)
chr2 (78-146)||(44143966-44144034)
chr2 (9-120)||(10554265-10554374)
chr2 (57-138)||(43653062-43653143)
chr2 (78-146)||(25852847-25852915)
[»] chr1 (50 HSPs)
chr1 (9-192)||(48933900-48934083)
chr1 (9-192)||(19247179-19247362)
chr1 (9-192)||(32117352-32117535)
chr1 (10-192)||(26308188-26308370)
chr1 (9-192)||(5673483-5673666)
chr1 (9-192)||(29921166-29921349)
chr1 (9-192)||(51001311-51001494)
chr1 (11-192)||(8113154-8113335)
chr1 (9-190)||(32087100-32087281)
chr1 (9-190)||(41713454-41713635)
chr1 (9-192)||(40499154-40499337)
chr1 (9-192)||(46291001-46291184)
chr1 (9-192)||(6015893-6016076)
chr1 (9-192)||(17702611-17702794)
chr1 (9-180)||(35274460-35274631)
chr1 (9-191)||(13073725-13073907)
chr1 (10-192)||(19513497-19513678)
chr1 (9-178)||(17475011-17475180)
chr1 (9-180)||(23443576-23443746)
chr1 (9-180)||(32562048-32562220)
chr1 (9-180)||(45942062-45942233)
chr1 (9-189)||(1702423-1702603)
chr1 (27-192)||(12602523-12602687)
chr1 (9-180)||(14289582-14289745)
chr1 (54-192)||(1441929-1442067)
chr1 (9-82)||(9640025-9640098)
chr1 (30-148)||(24663638-24663756)
chr1 (9-192)||(7009594-7009757)
chr1 (42-134)||(45926088-45926181)
chr1 (23-192)||(24527054-24527211)
chr1 (9-120)||(3486366-3486480)
chr1 (22-144)||(1701441-1701562)
chr1 (78-146)||(2482120-2482188)
chr1 (78-146)||(14246709-14246777)
chr1 (78-146)||(18909731-18909799)
chr1 (78-146)||(20582153-20582221)
chr1 (78-146)||(24317736-24317804)
chr1 (78-146)||(26163989-26164057)
chr1 (78-146)||(39568845-39568913)
chr1 (78-146)||(39982927-39982995)
chr1 (78-146)||(49823756-49823824)
chr1 (78-146)||(51290837-51290905)
chr1 (78-146)||(51676682-51676750)
chr1 (78-146)||(2137829-2137897)
chr1 (78-146)||(11172813-11172881)
chr1 (78-146)||(40400581-40400649)
chr1 (78-146)||(42948747-42948815)
chr1 (78-146)||(44722462-44722530)
chr1 (78-146)||(52025207-52025275)
chr1 (78-146)||(52043863-52043931)
[»] chr8 (51 HSPs)
chr8 (9-192)||(4006387-4006570)
chr8 (9-192)||(38946418-38946601)
chr8 (9-192)||(38235056-38235239)
chr8 (9-180)||(38459333-38459504)
chr8 (9-180)||(41941358-41941529)
chr8 (9-190)||(4230011-4230192)
chr8 (9-178)||(44026226-44026395)
chr8 (9-192)||(11266748-11266931)
chr8 (9-180)||(31793032-31793203)
chr8 (9-192)||(12723050-12723231)
chr8 (9-193)||(42687176-42687360)
chr8 (9-192)||(38167805-38167985)
chr8 (9-192)||(6202-6385)
chr8 (9-192)||(28152007-28152189)
chr8 (9-192)||(35329065-35329248)
chr8 (9-180)||(44704028-44704199)
chr8 (9-195)||(33771907-33772091)
chr8 (10-132)||(36056947-36057069)
chr8 (25-192)||(44696182-44696349)
chr8 (9-127)||(44025389-44025506)
chr8 (9-120)||(39713277-39713388)
chr8 (30-171)||(7988090-7988230)
chr8 (36-156)||(7969364-7969483)
chr8 (45-154)||(1848393-1848503)
chr8 (10-120)||(5346872-5346985)
chr8 (58-134)||(26991927-26992003)
chr8 (75-155)||(40184582-40184662)
chr8 (87-144)||(32911010-32911067)
chr8 (53-154)||(35979430-35979531)
chr8 (42-144)||(44953653-44953756)
chr8 (185-227)||(37145020-37145062)
chr8 (78-146)||(17602204-17602272)
chr8 (78-146)||(37578781-37578849)
chr8 (38-146)||(26290187-26290295)
chr8 (38-146)||(26303444-26303552)
chr8 (38-146)||(26315438-26315546)
chr8 (78-146)||(3032392-3032460)
chr8 (86-146)||(5599349-5599409)
chr8 (78-146)||(8376777-8376845)
chr8 (78-146)||(15840351-15840419)
chr8 (78-146)||(24822182-24822250)
chr8 (86-146)||(26122067-26122127)
chr8 (78-146)||(28884856-28884924)
chr8 (78-146)||(28910532-28910600)
chr8 (78-146)||(34564512-34564580)
chr8 (78-146)||(35605897-35605965)
chr8 (78-146)||(39365840-39365908)
chr8 (78-146)||(42512741-42512809)
chr8 (78-144)||(43663799-43663865)
chr8 (78-146)||(3136692-3136760)
chr8 (78-146)||(5988707-5988775)
[»] chr7 (56 HSPs)
chr7 (9-192)||(242181-242364)
chr7 (9-192)||(29042563-29042746)
chr7 (9-192)||(42435740-42435923)
chr7 (9-192)||(7883204-7883387)
chr7 (9-192)||(20493370-20493553)
chr7 (9-192)||(40863054-40863237)
chr7 (9-192)||(47540970-47541153)
chr7 (9-192)||(25226114-25226296)
chr7 (9-192)||(12846766-12846949)
chr7 (9-192)||(24981524-24981707)
chr7 (9-192)||(43501526-43501709)
chr7 (9-192)||(48613505-48613688)
chr7 (9-190)||(10594684-10594864)
chr7 (9-192)||(46102371-46102555)
chr7 (9-192)||(40304904-40305087)
chr7 (9-192)||(47010991-47011174)
chr7 (9-180)||(43776976-43777147)
chr7 (9-180)||(45869598-45869769)
chr7 (9-180)||(30172943-30173112)
chr7 (9-192)||(36688042-36688225)
chr7 (10-189)||(48873762-48873940)
chr7 (9-192)||(44709304-44709486)
chr7 (9-192)||(39597057-39597237)
chr7 (87-192)||(12429493-12429598)
chr7 (24-192)||(48642383-48642551)
chr7 (23-148)||(19020592-19020718)
chr7 (9-113)||(19474932-19475036)
chr7 (42-153)||(41469551-41469663)
chr7 (9-84)||(25236054-25236128)
chr7 (42-154)||(21202985-21203098)
chr7 (42-126)||(34012758-34012843)
chr7 (78-146)||(26015296-26015364)
chr7 (78-146)||(32541590-32541658)
chr7 (44-126)||(45236499-45236582)
chr7 (36-146)||(40994268-40994378)
chr7 (38-144)||(42094920-42095027)
chr7 (78-146)||(7901023-7901091)
chr7 (78-146)||(21873955-21874023)
chr7 (78-146)||(27325422-27325490)
chr7 (78-146)||(32661779-32661847)
chr7 (78-146)||(40704917-40704985)
chr7 (78-146)||(40995745-40995813)
chr7 (78-146)||(43246437-43246505)
chr7 (78-146)||(46321518-46321586)
chr7 (78-146)||(46924460-46924528)
chr7 (133-190)||(19474867-19474924)
chr7 (42-138)||(25066100-25066197)
chr7 (86-146)||(7791436-7791496)
chr7 (78-146)||(8215123-8215191)
chr7 (78-146)||(19699578-19699646)
chr7 (78-146)||(21278463-21278531)
chr7 (10-74)||(25765599-25765663)
chr7 (78-146)||(25877360-25877428)
chr7 (78-146)||(35924687-35924755)
chr7 (78-146)||(47065346-47065414)
chr7 (78-146)||(47778965-47779033)
[»] chr5 (44 HSPs)
chr5 (9-192)||(18865222-18865405)
chr5 (9-192)||(40739815-40739998)
chr5 (10-192)||(38768945-38769127)
chr5 (9-192)||(4621839-4622022)
chr5 (9-192)||(7339466-7339649)
chr5 (9-192)||(8233225-8233408)
chr5 (9-192)||(15271953-15272136)
chr5 (9-192)||(41881128-41881311)
chr5 (9-190)||(42436580-42436761)
chr5 (9-192)||(6245906-6246089)
chr5 (9-180)||(10552853-10553024)
chr5 (9-192)||(18522658-18522840)
chr5 (9-192)||(24478075-24478258)
chr5 (9-192)||(37106670-37106854)
chr5 (9-192)||(10665411-10665594)
chr5 (9-192)||(37274047-37274230)
chr5 (9-190)||(18979122-18979303)
chr5 (9-192)||(13210295-13210479)
chr5 (9-190)||(43547840-43548021)
chr5 (9-180)||(8048082-8048253)
chr5 (18-192)||(31499483-31499654)
chr5 (70-192)||(31485317-31485439)
chr5 (10-132)||(37341548-37341670)
chr5 (87-192)||(12188669-12188774)
chr5 (36-165)||(29385664-29385794)
chr5 (9-113)||(27309651-27309758)
chr5 (99-180)||(36294609-36294690)
chr5 (78-171)||(35318796-35318885)
chr5 (78-146)||(13145350-13145418)
chr5 (78-146)||(19034181-19034249)
chr5 (78-146)||(19617063-19617131)
chr5 (78-146)||(24559651-24559719)
chr5 (78-146)||(24600684-24600752)
chr5 (78-146)||(25085559-25085627)
chr5 (78-146)||(25143531-25143599)
chr5 (78-146)||(29920999-29921067)
chr5 (9-49)||(31485445-31485485)
chr5 (78-146)||(31510903-31510971)
chr5 (78-146)||(33281409-33281477)
chr5 (78-146)||(37866432-37866500)
chr5 (78-146)||(43293143-43293211)
chr5 (78-146)||(43517753-43517821)
chr5 (86-146)||(4155612-4155672)
chr5 (78-146)||(9066240-9066308)
[»] chr4 (58 HSPs)
chr4 (9-192)||(1523477-1523660)
chr4 (9-180)||(13961673-13961844)
chr4 (9-192)||(35338930-35339113)
chr4 (9-192)||(36852349-36852532)
chr4 (9-191)||(3027125-3027309)
chr4 (9-178)||(32933318-32933487)
chr4 (9-192)||(48991061-48991244)
chr4 (10-192)||(30215097-30215279)
chr4 (9-190)||(7318814-7318995)
chr4 (9-192)||(37829549-37829732)
chr4 (9-192)||(47466748-47466931)
chr4 (9-189)||(34160012-34160192)
chr4 (9-193)||(50469678-50469861)
chr4 (9-192)||(43457594-43457777)
chr4 (9-192)||(51323169-51323352)
chr4 (9-171)||(41201647-41201809)
chr4 (9-180)||(40430934-40431106)
chr4 (9-180)||(3025605-3025776)
chr4 (9-180)||(11691520-11691691)
chr4 (9-192)||(24035144-24035327)
chr4 (10-192)||(48639-48821)
chr4 (9-192)||(43620945-43621129)
chr4 (9-192)||(10480616-10480798)
chr4 (10-192)||(20292615-20292797)
chr4 (9-190)||(22847631-22847812)
chr4 (9-192)||(47429028-47429211)
chr4 (25-180)||(15659140-15659296)
chr4 (9-113)||(8713853-8713957)
chr4 (9-111)||(37682597-37682699)
chr4 (64-154)||(15506402-15506492)
chr4 (9-192)||(32136050-32136213)
chr4 (10-120)||(24897536-24897649)
chr4 (53-141)||(1536800-1536887)
chr4 (42-154)||(7818283-7818396)
chr4 (129-180)||(50562017-50562068)
chr4 (38-146)||(53874467-53874575)
chr4 (131-192)||(22301183-22301244)
chr4 (75-132)||(48348802-48348859)
chr4 (78-146)||(20434669-20434737)
chr4 (78-146)||(20738304-20738372)
chr4 (78-146)||(23894658-23894726)
chr4 (78-146)||(25858219-25858287)
chr4 (78-146)||(31710402-31710470)
chr4 (78-146)||(39539930-39539998)
chr4 (78-146)||(42349257-42349325)
chr4 (78-146)||(46563946-46564014)
chr4 (86-134)||(51396370-51396418)
chr4 (78-146)||(52912623-52912691)
chr4 (78-146)||(55182990-55183058)
chr4 (78-146)||(56017911-56017979)
chr4 (38-146)||(37233596-37233704)
chr4 (133-190)||(8713788-8713845)
chr4 (78-146)||(10541579-10541647)
chr4 (76-144)||(42131051-42131119)
chr4 (78-146)||(42723604-42723672)
chr4 (86-146)||(55215074-55215134)
chr4 (86-146)||(55220424-55220484)
chr4 (78-146)||(56363260-56363328)
[»] chr3 (46 HSPs)
chr3 (9-192)||(35155003-35155186)
chr3 (9-189)||(48585307-48585487)
chr3 (9-180)||(28411938-28412109)
chr3 (9-192)||(35232960-35233143)
chr3 (9-192)||(36231877-36232060)
chr3 (9-180)||(49779090-49779261)
chr3 (9-180)||(14279542-14279713)
chr3 (9-180)||(19942270-19942441)
chr3 (9-190)||(44353614-44353795)
chr3 (9-192)||(7680448-7680630)
chr3 (9-192)||(2612548-2612731)
chr3 (9-190)||(30419362-30419544)
chr3 (9-190)||(52343456-52343636)
chr3 (9-192)||(4595774-4595956)
chr3 (9-180)||(38144467-38144630)
chr3 (10-180)||(24200137-24200310)
chr3 (9-192)||(41589371-41589542)
chr3 (76-192)||(36840010-36840125)
chr3 (57-192)||(8947233-8947367)
chr3 (25-171)||(47097625-47097769)
chr3 (9-118)||(52813682-52813790)
chr3 (9-81)||(36835517-36835589)
chr3 (22-171)||(54556790-54556934)
chr3 (44-154)||(31608209-31608320)
chr3 (72-192)||(39626275-39626396)
chr3 (53-152)||(23483149-23483248)
chr3 (42-154)||(50507783-50507888)
chr3 (44-154)||(24989776-24989883)
chr3 (36-120)||(33393140-33393227)
chr3 (78-146)||(22781271-22781339)
chr3 (78-146)||(24395756-24395824)
chr3 (78-146)||(85209-85277)
chr3 (78-146)||(672630-672698)
chr3 (78-146)||(4515467-4515535)
chr3 (78-146)||(7678831-7678899)
chr3 (78-146)||(10840856-10840924)
chr3 (78-146)||(10999214-10999282)
chr3 (78-146)||(20834973-20835041)
chr3 (78-146)||(33712145-33712213)
chr3 (78-146)||(38871682-38871750)
chr3 (78-146)||(53974839-53974907)
chr3 (78-146)||(6267755-6267823)
chr3 (78-146)||(20048865-20048933)
chr3 (78-146)||(32236857-32236925)
chr3 (78-146)||(33967476-33967544)
chr3 (78-146)||(40585586-40585654)
[»] scaffold0847 (1 HSPs)
scaffold0847 (9-193)||(82-266)
[»] scaffold0578 (1 HSPs)
scaffold0578 (10-192)||(9261-9441)
[»] scaffold0003 (1 HSPs)
scaffold0003 (22-192)||(365192-365362)
[»] scaffold0007 (3 HSPs)
scaffold0007 (47-192)||(200455-200600)
scaffold0007 (78-146)||(156544-156612)
scaffold0007 (9-45)||(200653-200689)
[»] scaffold0855 (1 HSPs)
scaffold0855 (9-109)||(1-101)
[»] scaffold0672 (1 HSPs)
scaffold0672 (9-105)||(6913-7009)
[»] scaffold0570 (1 HSPs)
scaffold0570 (53-152)||(3866-3965)
[»] scaffold0062 (1 HSPs)
scaffold0062 (78-146)||(41084-41152)
[»] scaffold0438 (1 HSPs)
scaffold0438 (38-146)||(1524-1632)
[»] scaffold0391 (1 HSPs)
scaffold0391 (78-146)||(4569-4637)
[»] scaffold0065 (1 HSPs)
scaffold0065 (78-146)||(37533-37601)
[»] scaffold0368 (1 HSPs)
scaffold0368 (78-146)||(14420-14488)


Alignment Details
Target: chr6 (Bit Score: 156; Significance: 5e-83; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 29622698 - 29622881
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  29622698 ctaaaattccactctctttcacccaccaacgatcaaacaatcttgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattt 29622797  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  29622798 atactcgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaattttcttcttcttgttcaactgca 29622881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 6926605 - 6926422
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  6926605 ctaaaattccactctctttcacctaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaattaaaacatctttcattc 6926506  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  6926505 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 6926422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 31090569 - 31090752
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31090569 ctaaaattccactctctttcacccaccaactatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 31090668  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||| || |||||||||||| |||||||| | |||||||||    
T  31090669 atactcgattgcatataaataagtgcattttttcttctttttcaatagcgctggtttcaattttcttcttcttgttcaactgca 31090752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 8526008 - 8525825
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  8526008 ctaaaatttcactctctttcacccatcaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaatatctttcattc 8525909  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| |||||||| | |||||||||    
T  8525908 atactcgattgcatataaataagtgaattttttcttctttttcagtaatgctggtttcaattttcttcttcttgttcaactgca 8525825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 13444556 - 13444739
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  13444556 ctaaaatttcactctctttcatccaccaaggatcaaacaatcctgatgttcaattaatctatatggaagattaaagagtgaatcaaaacatctttcattc 13444655  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  13444656 atactcgattgcacataaataagtgatttttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 13444739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 34085081 - 34085251
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  34085081 ctaaaattccactctctttcacacaccaacgatcaaacaatcctgatattcaattaatctctatggaagattaaagagtga-tcaaaacatctttcattc 34085179  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||| |||||| |||||||||||||||| |||||||||||| ||||||||    
T  34085180 atactcgattgcatataaataagtgattttttttttctttttcaataacgctggtttcaattttcttcttct 34085251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 5715641 - 5715473
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  5715641 ctaaaatttcactctctttcacccaccaac-atcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgactcaaaacatctttcattc 5715543  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttctt 178  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||| ||||||    
T  5715542 atactggattgcatataaataagtgatttttttcttctttttcaataacgctgatttcaattttcttctt 5715473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 11368157 - 11368328
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||||||||||||| ||||||||||| || | ||||||||||||||||||    
T  11368157 ctaaaattccactctctttcacccatcaatgatcaaacaatcctgaagttcaattaatctctatagaagattaaagagtaagtcaaaacatctttcattc 11368256  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  11368257 atactcgattgcatataaataagtgaattttttcttccttttcaataactctggtttcaattttcttcttct 11368328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 29880749 - 29880931
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  29880749 ctaaaattccattctctttcacccatcaacgatcaaacaatcctgatgttcaattaatctttatggaagattaaagagtgaatcaaaacatcttttattc 29880848  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||| ||||||||||||| ||||||| |||||||||||||| | |||||||||||| |||| ||| | |||||||||    
T  29880849 atactcgattggatataaataagtggatttttt-ttctttttcaataatgctggtttcaattttcttcatcttgttcaactgca 29880931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 18024891 - 18024711
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||| | || ||||||||||||||| ||||||||||| ||||||||||||||||||| | ||||||||||| ||||||||| |    
T  18024891 ctaaaatttcactctctttcatc-acaaacgatcaaacaatcctgatgttcaatcaatctctatggaagattaaggagtgaatcaaaaaatctttcatcc 18024793  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    ||||| |||||||||||| ||| ||||||| ||||||||||||||||| | | |||||||||| |||||||| | |||||||    
T  18024792 atactcgattgcatataagtaactgaatttcttcttctttttcaataatgctagtttcaattttcttcttcttgttcaactg 18024711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 7082242 - 7082095
Alignment:
Q  25 tttcacccaccaacgatcaaacaatcatg-atgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcata 123  Q
    |||||||||| |||||||||||||||||  ||||||||| |||||  |||||||||||||| ||||||||||| |||| |||| || ||| |||||||||    
T  7082242 tttcacccacaaacgatcaaacaatcatccatgttcaatcaatctacatggaagattaaagagtgaatcaaaatatctctcatccaaactcgattgcata 7082143  T
Q  124 taaataagtgaattttttcttctttttcaataacgttggtttcaattt 171  Q
    ||| ||||||||||| ||||||||||||||| | | | ||||||||||    
T  7082142 taagtaagtgaatttcttcttctttttcaatgatgctagtttcaattt 7082095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 8810114 - 8810261
Alignment:
Q  25 tttcacccaccaacgatcaaacaatcat-gatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcata 123  Q
    |||||||||| |||||| |||||||||| |||||||||| ||||   |||||||||||||| |||||||||||||||| |||| || |||  ||||||||    
T  8810114 tttcacccacaaacgatgaaacaatcatcgatgttcaatcaatcaacatggaagattaaagagtgaatcaaaacatctctcatccaaactcaattgcata 8810213  T
Q  124 taaataagtgaattttttcttctttttcaataacgttggtttcaattt 171  Q
    ||| ||||||||||| ||||||||||||||| | | | ||||||||||    
T  8810214 taagtaagtgaatttcttcttctttttcaatgatgctagtttcaattt 8810261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 6675257 - 6675354
Alignment:
Q  53 gatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttcttttt 150  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| ||||  ||||||||||    
T  6675257 gatgttcaatcaatctctatagaagattaaagagtgaatcaaaacatctttcatccatactcgattgcatataaataagtggatttcctcttcttttt 6675354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 17314992 - 17314879
Alignment:
Q  42 caaacaatcatga-tgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttt 140  Q
    ||||||||||||| |||||||| ||||| |||  | |||||||| |||||||||||||| |||||| ||||||  ||||||||||| ||| ||||||| |    
T  17314992 caaacaatcatgaatgttcaatcaatctttataaaggattaaagagtgaatcaaaacatatttcatccatactctattgcatataagtaactgaatttct 17314893  T
Q  141 tcttctttttcaat 154  Q
    ||||||||||||||    
T  17314892 tcttctttttcaat 17314879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 137
Target Start/End: Original strand, 26947207 - 26947302
Alignment:
Q  42 caaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaatt 137  Q
    ||||||||||||   |||||| ||||||||| ||||||| ||| ||||||||||||||||||||||||| ||  ||||||||||| ||||||||||    
T  26947207 caaacaatcatggatttcaatcaatctctatagaagattgaagagtgaatcaaaacatctttcattcattctcaattgcatataagtaagtgaatt 26947302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 32173021 - 32173139
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatca----tgatgttcaattaatctct---atggaagattaaagcgtgaatcaaaacatct 101  Q
    |||||||| ||||||||||||||||  ||| ||||||||| ||    ||||||||||| |||||||   |||||||||||||| ||||||||||| || |    
T  32173021 ctaaaatttcactctctttcacccagaaacaatcaaacaaacaaacctgatgttcaatcaatctctgttatggaagattaaagagtgaatcaaaatattt 32173120  T
Q  102 ttcattcatacttgattgc 120  Q
    |||||  ||||| ||||||    
T  32173121 ttcatctatactcgattgc 32173139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 14253149 - 14253214
Alignment:
Q  42 caaacaatcatg-atgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcat 106  Q
    |||||||||||| ||||||||| |||||||||  |||||||||| ||||||||||| || ||||||    
T  14253149 caaacaatcatggatgttcaatcaatctctataaaagattaaagagtgaatcaaaatatttttcat 14253214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 18894369 - 18894301
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  18894369 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 18894301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 6167446 - 6167513
Alignment:
Q  79 ttaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    |||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  6167446 ttaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 6167513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 3095171 - 3095103
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| ||  ||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  3095171 attaaagagtgaatcaaaatattcttcatccatactcaattggatataagtaagtgaatttcttcttct 3095103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 13889504 - 13889564
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattt 138  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| |||||||||||    
T  13889504 attaaagagtgaatcaaaatatttttcatccatactcaattgaatataagtaagtgaattt 13889564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 25332347 - 25332407
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattt 138  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| |||||||||||    
T  25332347 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaattt 25332407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 29121813 - 29121881
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||| ||||||| |||||||    
T  29121813 attaaagagtgaatcaaaatatttttcatacatactcaattggatataagtaaatgaatttcttcttct 29121881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 29629960 - 29630028
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||| ||||||| |||||||    
T  29629960 attaaagagtgaatcaaaatatttttcatccatactcaattgaatataagtaattgaatttcttcttct 29630028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 5e-83; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 7721833 - 7722016
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  7721833 ctaaaattccactctctttcacccaccaacgatcaaacaatcttgatgttcaattaatctctatggaagattaaagagtgaatcaaaccatctttcattc 7721932  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  7721933 atactcgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaattttcttcttcttgttcaactgca 7722016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 9 - 190
Target Start/End: Original strand, 44456141 - 44456322
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44456141 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 44456240  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||  |||||||||||| |||||||| | |||||||    
T  44456241 atactcgattgcatataaataagtgaattttttcttcttttttaataacactggtttcaattttcttcttcttgttcaactg 44456322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 8034060 - 8034222
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8034060 ctaaaattccactctctttcatccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 8034159  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaattt 171  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8034160 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattt 8034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 9 - 191
Target Start/End: Complemental strand, 10522407 - 10522226
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10522407 ctaaaattccactctctttcacccgccaacgatcaa-caatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 10522309  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgc 191  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| | ||||||||    
T  10522308 atactcgattgcatataaataagtgaattttttcttctttttcaataacgttggtttctattttcttcttcttgttcaactgc 10522226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 4072689 - 4072872
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  4072689 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaatatctttcattc 4072788  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||||| | |||||||||    
T  4072789 atactcgattgtatataaataggtgaattttttcttctttttcaataacgctggtttcaatttttttcttcttgttcaactgca 4072872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 4330829 - 4331000
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  4330829 ctaaaatttcactctctttcacccaccaatgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaatatctttcattc 4330928  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  4330929 atactcgattgcatataaataagtgaattttttcttctttttcaataatgttggtttcaattttcttcttct 4331000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 13479765 - 13479936
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  13479765 ctaaaattccactctctttcactcaccaacgattaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatccaaacatctttcattc 13479864  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  13479865 atactcgattgcatataaataagtgaatttttttttctttttcaataacgttggtttcaattttcttcttct 13479936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 16312920 - 16313103
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| || |||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  16312920 ctaaaatttcattctctttcacccaccaacgatcaaacaatcctgttgttcaattaatctctatgaaagattaaagagtgagtcaaaacatctttcattc 16313019  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  16313020 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 16313103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 26171898 - 26171715
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||| |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  26171898 ctaaaatttcactctttttcacccaccaacgatcaaacaatcctaatgttcaattaatctctttggaagattaaagagtgaatcaaaatatctttcattc 26171799  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  26171798 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 26171715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 38628364 - 38628535
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  38628364 ctaaaatttcactctctttcacccatcaatgatcaaacaatcctgattttcaattaatctctatggaatattaaagagtgaatcaaaacatctttcattc 38628463  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  38628464 atactcgattgcatataaataagtgaattttttcttctttttcaataatgttggtttcaattttcttcttct 38628535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 31568987 - 31569168
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattca 109  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  31568987 taaaattccactctctttcacccaccaacaatcaaacaatcctgatgtttaattaatctctatagaagattaaagagtgaatcaaaacatctttcattca 31569086  T
Q  110 tacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||| ||| ||||||||||||||||| |||||||||||||| || |||| |||||||||||| |||||||| | |||||||||    
T  31569087 tactcgatcgcatataaataagtgaa-tttttcttctttttaaacaacgctggtttcaattttcttcttcttgttcaactgca 31569168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 31639830 - 31640002
Alignment:
Q  9 ctaaaattccactctctttcacccaccaac-gatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcatt 107  Q
    |||||||| |||||||||||| |||| ||  |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||     
T  31639830 ctaaaatttcactctctttcatccacaaaatgatcaaacaatcctgatgttcaatcaatctctatggaagattaaagagtgaatcaaaacatctttcatc 31639929  T
Q  108 catacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    |||||| |||||||||||| |  |||| ||| ||||||||||| ||||| | | |||||||||| ||||||||    
T  31639930 catactcgattgcatataagtgtgtgattttattcttcttttttaataatgctagtttcaattttcttcttct 31640002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 40658596 - 40658700
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||| |    
T  40658596 ctaaaattccaatctctttcacccacaaacgatcaaacaatcctgatgttcaatcaatctctatggaagattaaagagtgaatcaaaatatctttcatcc 40658695  T
Q  109 atact 113  Q
    |||||    
T  40658696 atact 40658700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 45442956 - 45443063
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctc---tatggaagattaaagcgtgaatcaaaacatctttca 105  Q
    |||||| ||||||||||||||||||  ||||||||||||| | ||||||||||| ||||||   ||||||||||||||| |||||||||||||| |||||    
T  45442956 ctaaaactccactctctttcacccagaaacgatcaaacaaacctgatgttcaatcaatctctgttatggaagattaaagagtgaatcaaaacatttttca 45443055  T
Q  106 ttcatact 113  Q
    | ||||||    
T  45443056 tccatact 45443063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 35006392 - 35006299
Alignment:
Q  42 caaacaatcatg-atgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtga 134  Q
    |||||||||||| ||||||||| ||||||||| ||||||| ||| |||||||||||||||||||||  ||| | |||||||||||| |||||||    
T  35006392 caaacaatcatggatgttcaatcaatctctatagaagattgaagagtgaatcaaaacatctttcatctatattcgattgcatataagtaagtga 35006299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 44799438 - 44799325
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctct---atggaagattaaagcgtgaatcaaaacatctttcat 106  Q
    ||||||||||||||||||||||    ||||||||| |||   ||||||||||| |||||||   |||||||||||||| ||||||||||| || ||||||    
T  44799438 taaaattccactctctttcaccttgaaacgatcaatcaaatctgatgttcaatcaatctctgttatggaagattaaagagtgaatcaaaatatttttcat 44799339  T
Q  107 tcatacttgattgc 120  Q
    ||||| | ||||||    
T  44799338 tcatattcgattgc 44799325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 1482491 - 1482423
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  1482491 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 1482423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 1520843 - 1520775
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  1520843 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 1520775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 2390128 - 2390196
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  2390128 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 2390196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 3178865 - 3178797
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  3178865 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 3178797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 10639361 - 10639293
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  10639361 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 10639293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 13195648 - 13195716
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  13195648 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 13195716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 21658545 - 21658477
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  21658545 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 21658477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 27980399 - 27980467
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  27980399 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 27980467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 34202929 - 34202861
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  34202929 attaaagagtgaatcaaaatatttttcatacatactcaattggatataagtaagtgaatttcttcttct 34202861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 37094688 - 37094620
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  37094688 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 37094620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 39697273 - 39697341
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  39697273 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 39697341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 40811183 - 40811251
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  40811183 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 40811251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 42343586 - 42343518
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  42343586 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 42343518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 43577557 - 43577489
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  43577557 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 43577489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 44144034 - 44143966
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  44144034 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 44143966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 10554265 - 10554374
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctct---atggaagattaaagcgtgaatcaaaacatctttca 105  Q
    |||||||| ||| |||||||||| |  ||||||||||||| ||||   |||||  |||||||   |||||||||||||| |||||||||||||  |||||    
T  10554265 ctaaaatttcaccctctttcacctagaaacgatcaaacaaacatg---ttcaaccaatctctgtcatggaagattaaagagtgaatcaaaaca--tttca 10554359  T
Q  106 ttcatacttgattgc 120  Q
    | |||||| ||||||    
T  10554360 tccatactcgattgc 10554374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 138
Target Start/End: Original strand, 43653062 - 43653143
Alignment:
Q  57 ttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattt 138  Q
    |||||| |||||| ||| |||||||||| |||||| ||||| |||||||| |||| |  |||||| |||  |||||||||||    
T  43653062 ttcaatcaatctcaatgaaagattaaagagtgaattaaaacgtctttcatccatagtctattgcaaataggtaagtgaattt 43653143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 25852847 - 25852915
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| || ||| ||||||||||| |||||||    
T  25852847 attaaagagtgaatcaaaatatttttcatccatactcaattggatgtaagtaagtgaatttcttcttct 25852915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 156; Significance: 5e-83; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 48934083 - 48933900
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48934083 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 48933984  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  48933983 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 48933900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 19247179 - 19247362
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  19247179 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaatagtgaatcaaaacatctttcattc 19247278  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  19247279 atactcgattgcatataaattagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 19247362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 32117352 - 32117535
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32117352 ctaaaattccactctctttcacctatcaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 32117451  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  32117452 atacttgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 32117535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 26308370 - 26308188
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattca 109  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26308370 taaaattccactttctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattca 26308271  T
Q  110 tacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  26308270 tactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 26308188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 5673666 - 5673483
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5673666 ctaaaatttcactctctttcacccaccaacaatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 5673567  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  5673566 atactcgattgcataaaaataagtgaattttttcttctttttcaataacgttggtttcaattttcttcttcttgttcaactgca 5673483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 29921166 - 29921349
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  29921166 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattgaagagtgaatcaaaacatctttcattc 29921265  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  29921266 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 29921349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 51001311 - 51001494
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| || ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51001311 ctaaaatttcattctctttcatccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 51001410  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  51001411 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 51001494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 8113154 - 8113335
Alignment:
Q  11 aaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcat 110  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  8113154 aaaattccactctctttcacccaccaacgatcaaacaatcttgatgttcaattaatgtctatggaagattaaagagtgaatcaaaacatctttcattcat 8113253  T
Q  111 acttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||| |||||||| | |||||||||    
T  8113254 actcgattgcatataaataagtgaatttttttttctttttcaataacgtcgatttcaattttcttcttcttgttcaactgca 8113335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 32087281 - 32087100
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32087281 ctaaaatttcactctctttcatccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 32087182  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| | |||||||    
T  32087181 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttgttcttcttgttcaactg 32087100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 41713635 - 41713454
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  41713635 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctatatggaagattaaagagtgaatcaaaacatctttcattc 41713536  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| | |||||||    
T  41713535 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttgttcttcttgttcaactg 41713454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 40499337 - 40499154
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  40499337 ctaaaattccactctctttcacccactaacgatcaaacaatcctgatgttcaattaatctctatgaaagattaaagagtgaatcaaaacatctttcattc 40499238  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  40499237 atactcgattgcatataaataatcgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 40499154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 46291001 - 46291184
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  46291001 ctaaaattacaatctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 46291100  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| | |||||||||    
T  46291101 atactcgattgcatacaaataagtgaattttttcttctttttcaataacgctggtttcaattttattcttcttgttcaactgca 46291184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 6015893 - 6016076
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  6015893 ctaaaattccactctctttcacccaccaacgattaaacaatcatgatgttcaattaatctctatagaagattaaagagtcaatcaaaacatctttcattc 6015992  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  ||||||| | |||||||||    
T  6015993 atactctattgcatataaataagtgaattttttcttctttttcaataatgctggtttcaattttgttcttcttgttcaactgca 6016076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 17702794 - 17702611
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  17702794 ctaaaattccactctctttcacccaccaacgattaaacaattctgatgttcaattaatctctatcgaagattaaagagtgaatcaaaacatctttcattc 17702695  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||| | |||||||||    
T  17702694 atactcgattacatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcctcttcttgttcaactgca 17702611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 35274631 - 35274460
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  35274631 ctaaaatttcactcactttcacccaccaacgatcaaacaatcctgatgttcaattaatctctgtggaagattaaagagtgaatcaaaacatctttcattc 35274532  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||    
T  35274531 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttgttcttct 35274460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 191
Target Start/End: Complemental strand, 13073907 - 13073725
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  13073907 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctcatgttcaattaatctctatggaagattaaagagtgaatcaaaaaatctttcattc 13073808  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgc 191  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||| | | ||||||||    
T  13073807 atactcgattgcatataaataagtgaattttatcttctttttcaataacgctggtttcaattttcttctttttgttcaactgc 13073725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 19513497 - 19513678
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattca 109  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  19513497 taaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctttatgtaagattaaagagtgaatcaaaacatctttcattca 19513596  T
Q  110 tacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| |||||||| | |||||||||    
T  19513597 tactcgattgcatataaacaagtgaattttttctt-tttttcaataacgctggtttcaattttcttcttcttgttcaactgca 19513678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 17475180 - 17475011
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  17475180 ctaaaattccactctctttcacccattaacgatcaaacaatcctgatgttcaattaatctctatagaagattaaagagtgaataaaaacatctttcattc 17475081  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttctt 178  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  17475080 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttctt 17475011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 23443576 - 23443746
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23443576 ctaaaattacaatctctttcaaccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 23443675  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||    
T  23443676 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctgg-ttcaattttcttcttct 23443746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 32562220 - 32562048
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| |||||||||||    
T  32562220 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagtgttaatcaaaatatctttcattc 32562121  T
Q  109 atacttgattgcatataaataagtgaatt-ttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||  |||||||    
T  32562120 atactcgattgcatataaataagtgaatttttttcttctttttcaataatgttggtttcaattttattcttct 32562048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 45942233 - 45942062
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||| ||||||||||| |||||||||||||||||| ||||    
T  45942233 ctaaaattccactatctttcacccatcaacgatcaaacaatcctgatgttcaattaatctatatagaagattaaagagtgaatcaaaacatctttaattc 45942134  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||    
T  45942133 atactcgattgcatataaataagtgaatttttccttctttttcaataacgctggtttcaattttcttcttct 45942062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 1702603 - 1702423
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||    
T  1702603 ctaaaatttcactctctttcacccaccaacaatcaaacaatcttgatgttcaattaatttctatggaagattaaagaatgaatcaaaacacctttcattc 1702504  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaact 189  Q
    ||||| |||||| |||||| ||||||| ||||| |||||||||||||| |||||||||||||| |||||||| | ||||||    
T  1702503 atactcgattgcgtataaaaaagtgaaattttttttctttttcaataatgttggtttcaattttcttcttcttgttcaact 1702423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 12602687 - 12602523
Alignment:
Q  27 tcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataa 126  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| || ||||||| ||||| ||||||||||||    
T  12602687 tcacccaccaacgatcaaacaatcctgatgttcaattaatctctatgaaagattaaagagtgaatcaaaatatatttcatttatactcgattgcatataa 12602588  T
Q  127 ataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| |||||||| | |||||||||    
T  12602587 ataagtgaattttttcttc-ttttcaataacgctggtttcaatttccttcttcttgttcaactgca 12602523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 14289582 - 14289745
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||||||||||| ||||||||| ||         ||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  14289582 ctaaaattccactctctttcatccaccaacgttcc--------tgatgttcaattaatctctattgaagattaaagagtggatcaaaacatctttcattc 14289673  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||    
T  14289674 atactcgattgcatataaataagtgaattttttcttctttttcaataaagctggtttcaattttcttcttct 14289745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 192
Target Start/End: Complemental strand, 1442067 - 1441929
Alignment:
Q  54 atgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttctttttcaa 153  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||| |||||| |||||| |||||||||||| ||| ||||||| ||||||||||||||    
T  1442067 atgttcaatcaatctctatgaaagattaaagaatgaatcaaaacatatttcatccatactcgattgcatataagtaaatgaatttcttcttctttttcaa 1441968  T
Q  154 taacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||| ||| |||||||||| |||||| | | |||||||||    
T  1441967 taatgttagtttcaattttcttctttttgttcaactgca 1441929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 9640025 - 9640098
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaa 82  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  9640025 ctaaaattccactctctttcacccaccaacgatcaaacaattctgatgttcaattaatctctatggaagattaa 9640098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 24663638 - 24663756
Alignment:
Q  30 cccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaata 129  Q
    ||||| || |||||||||||| ||||||||||| |||||||||| |||||||||| |||||| |||||||||||||  |||||| |||| ||||||| ||    
T  24663638 cccacaaatgatcaaacaatcctgatgttcaatcaatctctatgaaagattaaagagtgaattaaaacatctttcacccatactcgatttcatataagta 24663737  T
Q  130 agtgaattttttcttcttt 148  Q
    ||||| ||| || ||||||    
T  24663738 agtgattttatttttcttt 24663756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 7009757 - 7009594
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||        ||||||| ||||||||||||||||||||| |    
T  7009757 ctaaaattccaatctctttcacccacaaacgatcaaacaatcatgatgttcaatcaatctc--------attaaagagtgaatcaaaacatctttcatcc 7009666  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| || |            |||||||| ||||||||||||||||| | | |||||||||| |||||||| | |||||||||    
T  7009665 atactcgact------------gtgaatttcttcttctttttcaataatgctagtttcaattttcttcttcttgttcaactgca 7009594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 45926181 - 45926088
Alignment:
Q  42 caaacaatcatg-atgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtga 134  Q
    |||||||||||| ||||||||| ||||||||| ||||||| ||| ||||||||||||||||||||| |||||| |||||||||||| |||||||    
T  45926181 caaacaatcatgtatgttcaatcaatctctatagaagattgaagagtgaatcaaaacatctttcatccatactcgattgcatataagtaagtga 45926088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 24527054 - 24527211
Alignment:
Q  23 tctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcat 122  Q
    ||||||||| || ||| ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||| |||||| || |||      
T  24527054 tctttcaccaacaaacaatcaaacaatcctgatgttcaatcaatctttatggaagattaaagagtgaattaaaacatctttcatccatactcgactgc-- 24527151  T
Q  123 ataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
              |||||| ||||||||||||||||| | | |||||||||| |||||||| | |||||||||    
T  24527152 ----------gaatttcttcttctttttcaataatgctagtttcaattttcttcttcttgttcaactgca 24527211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 3486480 - 3486366
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctc---tatggaagattaaagcgtgaatcaaaacatctttca 105  Q
    |||||||||||| ||||||||||||  || |||||||||| | ||||||||||| ||||||   || |||||||||||| |||||||||||||| |||||    
T  3486480 ctaaaattccacactctttcacccagaaatgatcaaacaaacttgatgttcaatcaatctctgttacggaagattaaagagtgaatcaaaacatttttca 3486381  T
Q  106 ttcatacttgattgc 120  Q
    | |||||| ||||||    
T  3486380 tccatactcgattgc 3486366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 1701441 - 1701562
Alignment:
Q  22 ctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgca 121  Q
    ||||||||||||| ||||||||||||| |  ||||||| || ||| | ||||||||||||||| ||||||||||  ||||||||| |||||| |||| ||    
T  1701441 ctctttcacccacaaacgatcaaacaaacc-gatgttcgatcaatttatatggaagattaaagagtgaatcaaattatctttcatccatactcgatttca 1701539  T
Q  122 tataaataagtgaattttttctt 144  Q
    || || ||| ||||||| |||||    
T  1701540 tacaagtaaatgaatttcttctt 1701562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 2482120 - 2482188
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  2482120 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 2482188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 14246709 - 14246777
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || || ||| ||||||  |||| |||||| |||||||||||||||||||    
T  14246709 attaaagagtgaatcaaaatattttacatccatactcaattggatataagtaagtgaattttttcttct 14246777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 18909799 - 18909731
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  18909799 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 18909731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 20582221 - 20582153
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  20582221 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 20582153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 24317804 - 24317736
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  24317804 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 24317736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 26163989 - 26164057
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  26163989 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 26164057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 39568845 - 39568913
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  39568845 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 39568913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 39982995 - 39982927
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  39982995 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 39982927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 49823824 - 49823756
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  49823824 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 49823756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 51290905 - 51290837
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  51290905 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 51290837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 51676682 - 51676750
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  51676682 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 51676750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 2137829 - 2137897
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    |||||||  |||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  2137829 attaaagaatgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 2137897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 11172813 - 11172881
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || || ||| ||||||  |||| |||||| ||||||||||| |||||||    
T  11172813 attaaagagtgaatcaaaatattttacatccatactcaattggatataagtaagtgaatttcttcttct 11172881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 40400649 - 40400581
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||| ||||||| |||||||    
T  40400649 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaattgaatttcttcttct 40400581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 42948815 - 42948747
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||  |||||| ||||||||||| |||||||    
T  42948815 attaaagagtgaatcaaaatatttttcatacatactcaattagatataagtaagtgaatttcttcttct 42948747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 44722530 - 44722462
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| |||||| |||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  44722530 attaaagagtgaattaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 44722462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 52025275 - 52025207
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||  |||||| ||||||||||| |||||||    
T  52025275 attaaagagtgaatcaaaatatttttcatccatactcaattcgatataagtaagtgaatttcttcttct 52025207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 52043863 - 52043931
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || ||||||  |||||  |||| |||||| ||||||||||| |||||||    
T  52043863 attaaagagtgaatcaaaatatttttcatctatactcaattggatataagtaagtgaatttcttcttct 52043931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 4006570 - 4006387
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  4006570 ctaaaatttcactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctcaatggaagattaaagagtgaatcaaaacatctttcattc 4006471  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  4006470 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 4006387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 38946601 - 38946418
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38946601 ctaaaattccactttctttcacccactaacgatcaaacaatcttgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 38946502  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  38946501 atactcgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaattttcttcttcttgttcaactgca 38946418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 38235239 - 38235056
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  38235239 ctaaaattccactctctttcacccaccaacgatcaaacaatcttgatgttcaattaatctctatggaagattaaagagtgaatcaaaatatctttcattc 38235140  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
     |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  38235139 gtactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 38235056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 38459333 - 38459504
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38459333 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 38459432  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  38459433 atactcgattgcatataaataagtgaattttttcttctttttcaataatgttggtttcaattttattcttct 38459504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 41941358 - 41941529
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  41941358 ctaaaattccactctctttcacccatcaacgatcaaacaatcatgatgttcaattaatttctatgaaagattaaagagtgaatcaaaacatctttcattc 41941457  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  41941458 atactcgattgcatataaataagtgaattttttcttctttttcaataatgttggtttcaattttcttcttct 41941529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 4230192 - 4230011
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4230192 ctaaaatttcactctctttcacccaccaacgatcaaacaattctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 4230093  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| | |||||||    
T  4230092 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttgttcttcttgttcaactg 4230011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 44026395 - 44026226
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  44026395 ctaaaattccactctctttcacccaccaacgatcaaacaatcttgatgttcaattaatctctatggaagattaaggagtgaatcaaaacatctttcattc 44026296  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttctt 178  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||    
T  44026295 atactcgattgcatataaataagtgaattttttcttctttttcaataacactggtttcaattttcttctt 44026226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 11266931 - 11266748
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  11266931 ctaaaattccactctcattcacccaccaacgatcaaacaatcctgatgttcaattaatctctatcgaagattaaagagtgaatcaaaacatctttcattc 11266832  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||| | |||||||||    
T  11266831 atactcgattgtatataaataagtgaattttttcttctttttcaataacgctagtttcaattttcttcttcttgttcaactgca 11266748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 31793032 - 31793203
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||    
T  31793032 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatcgttatggaagattaaagagtgaatcaaaacatctttcattc 31793131  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  31793132 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttct 31793203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 12723231 - 12723050
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12723231 ctaaaattccactctctttcaccgaccaacgatcaaacaatcc--atgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 12723134  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||| | |||||||||    
T  12723133 atactcgattgcatataaataagtgaattttttcttctttttcaatgacgctggtttcaattttcttcttcttgttcaactgca 12723050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 193
Target Start/End: Original strand, 42687176 - 42687360
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||  ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  42687176 ctaaaatttaactctctttcatccaccaacaatcaaacaatcctgatgttcaattaatctctatagaatattaaagagtgaatcaaaacatctttcattc 42687275  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgcag 193  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  42687276 atactcgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaattttcttcttcttgttcaactgcag 42687360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 38167805 - 38167985
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  38167805 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtcaatcaaaacatctttcattc 38167904  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||| ||||||||||||||   ||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  38167905 atactcgattgcatatgaataagtgaatttt---ttctttttcaataacgttggtttcaattttcttcttcttgttcaactgca 38167985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 6385 - 6202
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||    
T  6385 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgatcaattaatctctatggaagattacagagtgaatcaaaacatctttcattc 6286  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |   |||||||||| |||||||| | |||||||||    
T  6285 atactcgattgcatataaataagtgaattttttcttctttttcaataatgcatgtttcaattttcttcttcttgttcaactgca 6202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 28152189 - 28152007
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||||| |||| ||||||||| ||||||||    
T  28152189 ctaaaattccactctctttcacccaccaacaatcaaacaatcctaatgttcaattaatctctatgaaagattaaagagtgattcaaaacatatttcattc 28152090  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  28152089 atactcgattgcatataaataagtgaatttttt-ttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 28152007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 35329065 - 35329248
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  35329065 ctaaaatttcactttctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctttggaagattaaagagtgaatcaaaacatctttcattc 35329164  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| | ||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||  ||||||| | |||||||||    
T  35329165 atactagcttgtatataaataagtgaatttttttttctttttcaataacgctggtttcaattttattcttcttgttcaactgca 35329248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 44704028 - 44704199
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  44704028 ctaaaatttcactctctttcacccaccaacgaccaaacaatcctgatgttcaattaatctctatggaagattaaagagcgaatcaaaacatctttcattc 44704127  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| ||||    
T  44704128 atacccgattgcatataaataagtgaattttttcttctttttcaataaagctggtttcaattttctttttct 44704199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 33772091 - 33771907
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||  |||| ||||||||||||||||||    
T  33772091 ctaaaattccactctctttcacccaccaacgatcaaacaattttgatgttcaattaatctctatggaagatcaaatagtgagtcaaaacatctttcattc 33771992  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgcagct 195  Q
    |||||  |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||  || |||| | ||||||||||||    
T  33771991 atactcaattgcatataaataagtgaatttttttttctttttcaataacgctggtttcaattt--tttttcttgttcaactgcagct 33771907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 36056947 - 36057069
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattca 109  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36056947 taaaatttcactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattca 36057046  T
Q  110 tacttgattgcatataaataagt 132  Q
    |||| |||| |||||||||||||    
T  36057047 tactcgattacatataaataagt 36057069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 25 - 192
Target Start/End: Complemental strand, 44696349 - 44696182
Alignment:
Q  25 tttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatat 124  Q
    |||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||   |||||  | |||||||    
T  44696349 tttcacccacaaacgatcaaacaattctgatgttcaatcaatctctatggaagattaaagagtgaatcaaaacatctttcaccgatactcaagtgcatat 44696250  T
Q  125 aaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    || ||| ||||||| ||||||||||||||||| ||| |||||||| | ||| |||| | |||||||||    
T  44696249 aagtaaatgaatttcttcttctttttcaataatgttagtttcaatcttcttgttcttgttcaactgca 44696182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 44025506 - 44025389
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||| |||| |||||||||| |||||||||||||| ||||||||    
T  44025506 ctaaaatttcactctctttcacccaccaacgatcaaaca-tcctgatgttcaattaatctgtatgaaagattaaagagtgaatcaaaacatatttcattc 44025408  T
Q  109 atacttgattgcatataaa 127  Q
     |||| |||||||||||||    
T  44025407 gtactcgattgcatataaa 44025389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 39713388 - 39713277
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||||||| ||||||||||||||||||||| |    
T  39713388 ctaaaatttcaatctctttcacccacaaacgatcaaacaatcatgatgttcaatcaattcctatggaagattaaagagtgaatcaaaacatctttcatcc 39713289  T
Q  109 atacttgattgc 120  Q
    ||||| ||||||    
T  39713288 atactcgattgc 39713277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 30 - 171
Target Start/End: Original strand, 7988090 - 7988230
Alignment:
Q  30 cccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaata 129  Q
    ||||| ||||||||||||||| |||| || ||| ||||||||||||||||||||| |||||||||||| |||||||| ||||||| |||||||||||  |    
T  7988090 cccacaaacgatcaaacaatc-tgatatttaatcaatctctatggaagattaaagagtgaatcaaaacttctttcatccatactttattgcatataagca 7988188  T
Q  130 agtgaattttttcttctttttcaataacgttggtttcaattt 171  Q
    |||| |||| ||||||||||||||||| | | ||||||||||    
T  7988189 agtgtatttcttcttctttttcaataatgctagtttcaattt 7988230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 7969364 - 7969483
Alignment:
Q  36 aacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaa 135  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||  | ||| |    
T  7969364 aacgatcaaacaatc-tgatgttcaatcaatctctatggaagattaaagagtgaatcaaaacttctttcatccatacttgattgcatataagcaggtgta 7969462  T
Q  136 ttttttcttctttttcaataa 156  Q
    ||| ||||||| |||||||||    
T  7969463 tttcttcttctatttcaataa 7969483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 45 - 154
Target Start/End: Original strand, 1848393 - 1848503
Alignment:
Q  45 acaatcatg-atgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttct 143  Q
    ||||||||| ||||||||| ||| | ||| ||||||||||| ||| |||||||||| |||||| ||||||||||||||||||| ||| ||| ||| ||||    
T  1848393 acaatcatggatgttcaatcaatatttatagaagattaaagagtggatcaaaacatatttcatccatacttgattgcatataagtaaatgagtttcttct 1848492  T
Q  144 tctttttcaat 154  Q
    |||||||||||    
T  1848493 tctttttcaat 1848503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 5346872 - 5346985
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctc---tatggaagattaaagcgtgaatcaaaacatctttcat 106  Q
    |||||||||||||||||||||||   ||||||||| ||| | ||||||||||| ||||||   ||||||||||||||| ||||||||||| || ||||||    
T  5346872 taaaattccactctctttcaccctgaaacgatcaatcaaacctgatgttcaatcaatctctattatggaagattaaagagtgaatcaaaatatttttcat 5346971  T
Q  107 tcatacttgattgc 120  Q
     |||||| ||||||    
T  5346972 ccatactcgattgc 5346985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 26991927 - 26992003
Alignment:
Q  58 tcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtga 134  Q
    ||||| ||||||||| ||||||| ||| ||||||||||||||||||| ||||||||  ||||||||||| |||||||    
T  26991927 tcaatcaatctctatagaagattgaagagtgaatcaaaacatctttcgttcatactcaattgcatataagtaagtga 26992003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 155
Target Start/End: Complemental strand, 40184662 - 40184582
Alignment:
Q  75 aagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttctttttcaata 155  Q
    ||||| |||| ||||||||||||| ||||||| |||||| |||||||||||| ||||||||||| ||||||  ||||||||    
T  40184662 aagatgaaagagtgaatcaaaacaactttcatccatactcgattgcatataagtaagtgaatttcttcttccatttcaata 40184582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 32911067 - 32911010
Alignment:
Q  87 tgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttctt 144  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||    
T  32911067 tgaatcaaaacatctttcattcatactctattgcatataagtaagtgaatttcttctt 32911010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 35979430 - 35979531
Alignment:
Q  53 gatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttctttttca 152  Q
    |||||||||| ||||||||   ||||||||||  |||||||||| ||||||||| ||||||   |||||||||| ||||||||||| ||||| || ||||    
T  35979430 gatgttcaatcaatctctaaaaaagattaaagactgaatcaaaatatctttcatccatactatgttgcatataagtaagtgaatttcttctttttgttca 35979529  T
Q  153 at 154  Q
    ||    
T  35979530 at 35979531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 44953756 - 44953653
Alignment:
Q  42 caaacaatcat-gatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttt 140  Q
    ||||||||||| |||||||||| |||||||||  |||||||||| || ||||||| ||  ||||| |||||||  |||| |||||| ||||||||||| |    
T  44953756 caaacaatcatagatgttcaatcaatctctataaaagattaaagagtaaatcaaatcacttttcactcatactctattggatataagtaagtgaatttct 44953657  T
Q  141 tctt 144  Q
    ||||    
T  44953656 tctt 44953653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 37145020 - 37145062
Alignment:
Q  185 caactgcagctagctgactctgattgggattttgaccaatggg 227  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  37145020 caactgcagctagctgactctgattgggattttcaccaatggg 37145062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 17602272 - 17602204
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||||||||||  |||| |||||| ||||||||||| |||||||    
T  17602272 attaaagagtgaatcaaaatatttttcattcatactcaattggatataagtaagtgaatttcttcttct 17602204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 37578849 - 37578781
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| |||||| ||||| |||||| ||||||||||| |||||||    
T  37578849 attaaagagtgaatcaaaatatttttcatccatactcgattgaatataagtaagtgaatttcttcttct 37578781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 26290187 - 26290295
Alignment:
Q  38 cgatcaaacaatcatgatgttcaatt--aatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaa 135  Q
    ||||||||||||| |||||||||||   |||||| ||| || ||||||| || |||||||| || |||||||||||||  |||| |||||| ||||||||    
T  26290187 cgatcaaacaatc-tgatgttcaatatcaatctccatgaaa-attaaagagtaaatcaaaatatttttcattcatactcaattggatataagtaagtgaa 26290284  T
Q  136 ttttttcttct 146  Q
    ||| |||||||    
T  26290285 tttcttcttct 26290295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 26303444 - 26303552
Alignment:
Q  38 cgatcaaacaatcatgatgttcaatt--aatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaa 135  Q
    ||||||||||||| |||||||||||   |||||| ||| || ||||||| || |||||||| || |||||||||||||  |||| |||||| ||||||||    
T  26303444 cgatcaaacaatc-tgatgttcaatatcaatctccatgaaa-attaaagagtaaatcaaaatatttttcattcatactcaattggatataagtaagtgaa 26303541  T
Q  136 ttttttcttct 146  Q
    ||| |||||||    
T  26303542 tttcttcttct 26303552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 26315438 - 26315546
Alignment:
Q  38 cgatcaaacaatcatgatgttcaatt--aatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaa 135  Q
    ||||||||||||| |||||||||||   |||||| ||| || ||||||| || |||||||| || |||||||||||||  |||| |||||| ||||||||    
T  26315438 cgatcaaacaatc-tgatgttcaatatcaatctccatgaaa-attaaagagtaaatcaaaatatttttcattcatactcaattggatataagtaagtgaa 26315535  T
Q  136 ttttttcttct 146  Q
    ||| |||||||    
T  26315536 tttcttcttct 26315546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 3032392 - 3032460
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  3032392 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 3032460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 5599349 - 5599409
Alignment:
Q  86 gtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||||||| || |||||| ||||||  |||| |||||||||||||||||| |||||||    
T  5599349 gtgaatcaaaatatttttcatccatactcaattggatataaataagtgaatttcttcttct 5599409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 8376845 - 8376777
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  8376845 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 8376777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 15840419 - 15840351
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  15840419 attaaagagtgaatcaaaatatttttcatccatactcaattgaatataagtaagtgaatttcttcttct 15840351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 24822182 - 24822250
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  24822182 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 24822250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 26122067 - 26122127
Alignment:
Q  86 gtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||||||| || |||||||||||||  |||| |||||| ||||||||||| |||||||    
T  26122067 gtgaatcaaaatatttttcattcatactcaattggatataagtaagtgaatttcttcttct 26122127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 28884856 - 28884924
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  28884856 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttattcttct 28884924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 28910600 - 28910532
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  28910600 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttattcttct 28910532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 34564512 - 34564580
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  34564512 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 34564580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 35605965 - 35605897
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  35605965 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 35605897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 39365908 - 39365840
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  39365908 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 39365840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 42512809 - 42512741
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  42512809 attaaagagtgaatcaaaatatttttcatacatactcaattggatataagtaagtgaatttcttcttct 42512741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 43663799 - 43663865
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttctt 144  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||    
T  43663799 attaaagagtgaatcaaaatatttttcatacatactcaattggatataagtaagtgaatttcttctt 43663865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 3136692 - 3136760
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||| ||||||| |||||||    
T  3136692 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaattgaatttcttcttct 3136760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 5988775 - 5988707
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||| ||||||| |||||||    
T  5988775 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaattgaatttcttcttct 5988707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 242364 - 242181
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  242364 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctttatggaagattaaagagtgaatcaaaacatctttcattc 242265  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  242264 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 242181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 29042746 - 29042563
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29042746 ctaaaattccactctctttcacccaccaacaatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 29042647  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  29042646 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 29042563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 42435740 - 42435923
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  42435740 ctaaaatttcactctctttcacccaccaacgatcaaacaatcatgatattcaattaatctctatcgaagattaaagagtgaatcaaaacatctttcattc 42435839  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  42435840 atactcgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaattttcttcttcttgttcaactgca 42435923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 7883204 - 7883387
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||     
T  7883204 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaaaatctttcattg 7883303  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  7883304 atactcgattgcatataaataagtggattttttcttctttttcaataacgttggtttcaattttcttcttcttgttcaactgca 7883387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 20493553 - 20493370
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20493553 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 20493454  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||| | |||||||||    
T  20493453 atactcgattgcatataaataagtgaattttttcttctttttcaatagcgctggtttcaattttcttcttcttgttcaactgca 20493370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 40863237 - 40863054
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40863237 ctaaaatttcacactctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 40863138  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| | |||||||||    
T  40863137 atactcgattgcatataaataagtgaattttttcttctttttcaataacgcgggtttcaattttcttcttcttgttcaactgca 40863054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 47541153 - 47540970
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  47541153 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtaaatcaaaacatctttcattc 47541054  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  47541053 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 47540970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 25226296 - 25226114
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25226296 ctaaaattcca-tctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 25226198  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||| | |||||||||    
T  25226197 atactcgattgcatataaataagtgaattttttcttccttttcaataacgctggtttcaattttcttcttcttgttcaactgca 25226114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 12846766 - 12846949
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||    
T  12846766 ctaaaatttcactctctttcacccaccaacgatcaaacattcctgatgttcaattaatcgttatggaagattaaagagtgaatcaaaacatctttcattc 12846865  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  12846866 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 12846949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 24981707 - 24981524
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24981707 ctaaaattcccttctctttcacccaccaacgatcaaacaatcttgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 24981608  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||| | |||||||||    
T  24981607 atactcgattgcatataaataagtgaattttttcttcttttttaataacgctggtttccattttcttcttcttgttcaactgca 24981524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 43501526 - 43501709
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||| |||||||||||||||||||||||    
T  43501526 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctttgaaagattaaagagtgaatcaaaacatctttcattc 43501625  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||| | |||||||||    
T  43501626 atactcgattgcatataaataagtgaattttttcttctttttcgataacgttagtttcaattttcttcttcttgttcaactgca 43501709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 48613688 - 48613505
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  48613688 ctaaaatttcactctttttcacccaccaacgattaaacaatcatgatgttcaattaatctctatggaagattaaagagtgaatcaaaatatctttcattc 48613589  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  48613588 atactcgattgtatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 48613505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 10594864 - 10594684
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10594864 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 10594765  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    ||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||  ||||||| | |||||||    
T  10594764 atactcgattgcatataaataagtgaatttttt-ttcttttttaataacgttggtttcaattttgttcttcttgttcaactg 10594684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 46102555 - 46102371
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  46102555 ctaaaattccactctttttcacccaccaacgatcaaacaatcttgatgttcaattaatctctacggaagattaaagagtgaatcaaaatatctttcattc 46102456  T
Q  109 atacttgattgcatataaataagtgaatt-ttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  46102455 atactcgattgcatataaataagtgaatttttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 46102371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 40304904 - 40305087
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40304904 ctaaaatttcactctctttcacccaccaacgatcaaacaattttgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 40305003  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||| || |||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| | |||||||||    
T  40305004 atactcgattacacataaataagtgaattttttcttctttttcaataacgctggttttaattttcttcttcttgttcaactgca 40305087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 47011174 - 47010991
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||| |||||||||||||||||||||||||  ||||||| ||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  47011174 ctaaaatttcactctttttcacccaccaacgatcaaacaattctgatgtttaattaatatctatggaagattaaagagtgaatcaaaatatctttcattc 47011075  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  47011074 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 47010991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 43777147 - 43776976
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  43777147 ctaaaattccactctctttctcccatcaacgatcaaacaatcctgatgttcaattaatctctatagaagattaaagagtgaatcaaaacatttttcattc 43777048  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| ||||||||    
T  43777047 atactcgattgcatataaataagtgaattttttcttccttttcaataatgctggtttcaattttcttcttct 43776976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 45869598 - 45869769
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  45869598 ctaaaattccattctttttcacccaccaacgatcaaacaatcgtgatgttcaattaatctctatggaagattaaaaagtgaatcaaaatatctttcattc 45869697  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    | ||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  45869698 acactcgattgaatataaataagtgaattttttcttcttttttaataacgttggtttcaattttcttcttct 45869769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 30172943 - 30173112
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||| ||||||||||| |||| ||||||    
T  30172943 ctaaaattccactctcttgcacccaccaacgatcaaacaatcatgatgttcaattaatctct--gaaagattaaagagtgaatcaaaatatctgtcattc 30173040  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  30173041 atactcgattgtatataaataagtgaattttttcttctttttcaataacgttggtttcaatgttcttcttct 30173112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 36688042 - 36688225
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||| ||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||| |||     
T  36688042 ctaaaattctactctctttcatccaccaacgatcaaacaatcccgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttaattt 36688141  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||| |||| | |||||||||    
T  36688142 atactcgattggatataaataagtgatttttttcttctttttcaataacgatggtttcaattttctttttcttgttcaactgca 36688225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 48873762 - 48873940
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattca 109  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||  ||||||||||     
T  48873762 taaaattccattctctttcacccatcaacgatcaaacaatcttgatgttcagttaatctctatggaagattaaagagtgaatcaaaa-ttctttcattcg 48873860  T
Q  110 tacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaact 189  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||| | ||||||    
T  48873861 tactcgattgcatataaataagtgaattttttcttctttttcaataatgctggtttcaattttcttcttcttgttcaact 48873940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 44709304 - 44709486
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| || ||||||||| ||||||||||||||| |||| ||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||    
T  44709304 ctaaaatttcaatctctttcatccaccaacgatcaaaaaatcttgatgttcaattaatctatatggaagattaaacaatgaatcaaaacatctttcattc 44709403  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  44709404 atactcgattgcatataaataagtgaaattttt-ttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 44709486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 39597057 - 39597237
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  39597057 ctaaaatttcactctctttcagccaccaacgatcaaacaatcttgatgttcatttaatctatatggaagattaaagagtgaatcaaaacatctttaattc 39597156  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| ||| |  |||||||||| |||||||| | |||||||||    
T  39597157 atactcgattgcatataaataagtgatttttttcttctttttcaa-aacat--gtttcaattttcttcttcttgttcaactgca 39597237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 87 - 192
Target Start/End: Complemental strand, 12429598 - 12429493
Alignment:
Q  87 tgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctca 186  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||    
T  12429598 tgaatcaaaacatctttcattcatactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttca 12429499  T
Q  187 actgca 192  Q
    ||||||    
T  12429498 actgca 12429493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 24 - 192
Target Start/End: Complemental strand, 48642551 - 48642383
Alignment:
Q  24 ctttcaccc-accaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcat 122  Q
    ||||||||| || ||| |||||||||| |||||||||||| |||||||||| |||||||||  |||||||||||| |||||| |||||| | ||||||||    
T  48642551 ctttcacccgacaaactatcaaacaat-atgatgttcaatcaatctctatgaaagattaaacagtgaatcaaaacttctttcgttcatattcgattgcat 48642453  T
Q  123 ataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||  ||||||||||||||||||||||||||||   | ||||||||||  ||||||| | |||||||||    
T  48642452 ataagcaagtgaattttttcttctttttcaataaatctagtttcaatttttttcttcttgttcaactgca 48642383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 148
Target Start/End: Original strand, 19020592 - 19020718
Alignment:
Q  23 tctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcat 122  Q
    |||||||||||| | ||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||    
T  19020592 tctttcacccacaagcgatcaaacaatc-tgatgttcaatcaatttctatggaagattaaagagtgaatcaaaacatctttcatccatactcgattgcat 19020690  T
Q  123 ataa--ataagtgaattttttcttcttt 148  Q
    ||||  | |||||| |||||| ||||||    
T  19020691 ataagtaaaagtgattttttttttcttt 19020718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 19475036 - 19474932
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||| |||||||||||||| |||||| ||| |||| ||||||||||| |||||||||||||||||||||  |||||||||||||||||||| |    
T  19475036 ctaaaattccaatctctttcacccacaaacgataaaagaatcttgatgttcaatcaatctctatggaagattaaagaatgaatcaaaacatctttcatcc 19474937  T
Q  109 atact 113  Q
    |||||    
T  19474936 atact 19474932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 41469551 - 41469663
Alignment:
Q  42 caaacaatcatga-tgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttt 140  Q
    |||||||| |||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||||| |||| | | |||||||||||||||||||||| |    
T  41469551 caaacaattatgaatgttcaatcaatctctatagaagattaaagggtgaatcaaaacatctttcatccatattcggttgcatataaataagtgaatttct 41469650  T
Q  141 tcttctttttcaa 153  Q
    |||||||||||||    
T  41469651 tcttctttttcaa 41469663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 25236128 - 25236054
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaag 84  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25236128 ctaaaattcca-tctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaag 25236054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 21202985 - 21203098
Alignment:
Q  42 caaacaatcatg-atgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttt 140  Q
    |||||||||||| | ||||||| ||||||||| ||| ||||||   | ||||||||||||||||||  |||||  ||||||||||| ||| ||||||| |    
T  21202985 caaacaatcatggacgttcaatcaatctctatagaatattaaataataaatcaaaacatctttcatctatactctattgcatataagtaattgaatttct 21203084  T
Q  141 tcttctttttcaat 154  Q
    | ||||||||||||    
T  21203085 tattctttttcaat 21203098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 34012758 - 34012843
Alignment:
Q  42 caaacaatcat-gatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataa 126  Q
    ||||||||||| |||||||||| |||||||||  |||||||||| ||||||||||||||||| ||| |||| |  |||||||||||    
T  34012758 caaacaatcatagatgttcaatcaatctctataaaagattaaagagtgaatcaaaacatcttccatccatattctattgcatataa 34012843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 26015296 - 26015364
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| ||||||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  26015296 attaaagagtgaatcaaaatatctttcatccatactcaattgaatataagtaagtgaatttcttcttct 26015364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 32541590 - 32541658
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||||||||||  |||| |||||| ||||||||||| |||||||    
T  32541590 attaaagagtgaatcaaaatatttttcattcatactcaattggatataagtaagtgaatttcttcttct 32541658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 45236499 - 45236582
Alignment:
Q  44 aacaatcatg-atgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataa 126  Q
    |||||||||| ||||||||| | |||| || ||||| || || ||||||||||||||||||||| ||||||  |||||||||||    
T  45236499 aacaatcatggatgttcaatcactctccatagaagaatagagagtgaatcaaaacatctttcatccatactcaattgcatataa 45236582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 40994268 - 40994378
Alignment:
Q  36 aacgatcaaacaatcatgatgttcaatt--aatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtg 133  Q
    ||||||||||||||  |||||||||||   |||||| ||| || ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||    
T  40994268 aacgatcaaacaatt-tgatgttcaatatcaatctccatgaaa-attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtg 40994365  T
Q  134 aattttttcttct 146  Q
    ||||| |||||||    
T  40994366 aatttcttcttct 40994378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 42094920 - 42095027
Alignment:
Q  38 cgatcaaacaatcatgatgttcaatt--aatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaa 135  Q
    ||||||||||||  |||||||||||   |||||| || ||| ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||    
T  42094920 cgatcaaacaatt-tgatgttcaatatcaatctccattgaaaattaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaa 42095018  T
Q  136 ttttttctt 144  Q
    ||| |||||    
T  42095019 tttcttctt 42095027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 7901091 - 7901023
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  7901091 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 7901023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 21873955 - 21874023
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  21873955 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 21874023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 27325490 - 27325422
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  27325490 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 27325422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 32661779 - 32661847
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  32661779 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 32661847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 40704917 - 40704985
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  40704917 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 40704985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 40995813 - 40995745
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  40995813 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 40995745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 43246437 - 43246505
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  43246437 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 43246505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 46321518 - 46321586
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  46321518 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 46321586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 46924528 - 46924460
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  46924528 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 46924460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 19474924 - 19474867
Alignment:
Q  133 gaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    |||||| ||||||||||||||||| | | |||||||||| |||||||| | |||||||    
T  19474924 gaatttcttcttctttttcaataatgctagtttcaattttcttcttcttgttcaactg 19474867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 25066100 - 25066197
Alignment:
Q  42 caaacaatcat-gatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattt 138  Q
    ||||||||||| ||| |||||| |||  | ||| |||||||||| |||||||||||| ||||| || |||| |  ||||||||||  |||||||||||    
T  25066100 caaacaatcatagatattcaatcaattccaatgaaagattaaagagtgaatcaaaacgtcttttatccatagtctattgcatataggtaagtgaattt 25066197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 7791496 - 7791436
Alignment:
Q  86 gtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  7791496 gtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 7791436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 8215123 - 8215191
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| ||||||  |||||||||| |||||||    
T  8215123 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagaaagtgaatttcttcttct 8215191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 19699646 - 19699578
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| ||||||  |||||||||| |||||||    
T  19699646 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagcaagtgaatttcttcttct 19699578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 21278463 - 21278531
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||| ||||||| |||||||    
T  21278463 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaattgaatttcttcttct 21278531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 25765663 - 25765599
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatgg 74  Q
    ||||||| ||| ||||||||||||  |||||| |||||||| | ||||||||| |||| ||||||    
T  25765663 taaaatttcacactctttcacccataaacgataaaacaatcctaatgttcaatcaatccctatgg 25765599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 25877428 - 25877360
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||| ||||||| |||||||    
T  25877428 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaattgaatttcttcttct 25877360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 35924755 - 35924687
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| |||||| |||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  35924755 attaaagagtgaattaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 35924687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 47065346 - 47065414
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| | ||||||||| |||||||    
T  47065346 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtgagtgaatttcttcttct 47065414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 47778965 - 47779033
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| |||||| |||| || |||||| ||||||  |||| |||||| ||| |||||||||||||||    
T  47778965 attaaagagtgaataaaaatatttttcatccatactcaattggatataagtaattgaattttttcttct 47779033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 18865405 - 18865222
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18865405 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 18865306  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  18865305 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 18865222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 40739998 - 40739815
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40739998 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 40739899  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  40739898 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 40739815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 38769127 - 38768945
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattca 109  Q
    ||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38769127 taaaatttcactctcttttacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattca 38769028  T
Q  110 tacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  38769027 tactcgattgcatataaataagtgaattttttattctttttcaataacgttggtttcaattttcttcttcttgttcaactgca 38768945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 4622022 - 4621839
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4622022 ctaaaatttcattctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 4621923  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  4621922 atactcgattgcatataaataagtgaattttttcttctttttcaataacgatggtttcaattttcttcttcttgttcaactgca 4621839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 7339649 - 7339466
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  7339649 ctaaaatttcactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctaaggaagattaaagagtgaatcaaaacatctttcattc 7339550  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||| | |||||||||    
T  7339549 atactcgattgcatataaataagtgaattttttcttctttttcaataatgctggtttcaattttcttcttcttgttcaactgca 7339466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 8233408 - 8233225
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8233408 ctaaaatttcactcttttacacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 8233309  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  8233308 gtactcgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaattttcttcttcttgttcaactgca 8233225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 15271953 - 15272136
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  15271953 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatttttcattc 15272052  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||| | |||||||||    
T  15272053 atactcgattgcatataaataagtgaattttttcttctttttcaataatgctggtttcaattttcttcttcttgttcaactgca 15272136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 41881128 - 41881311
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||    
T  41881128 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatcgttatggaagattaaagagtgaatcaaaacatctttcattc 41881227  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  41881228 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 41881311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 9 - 190
Target Start/End: Original strand, 42436580 - 42436761
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42436580 ctaaaatttcactctctttcacccatcaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 42436679  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||| | |||||||    
T  42436680 atactcgattgcatataaataagtgaattttttcttctttttcaataatgttggtttcaattttgttcttcttgttcaactg 42436761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 6246089 - 6245906
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6246089 ctaaaatttcattctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 6245990  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  6245989 atacccgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 6245906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 10553024 - 10552853
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  10553024 ctaaaatttcactctcattcacccaccaacgatcaaacaatcgtgatgttcaattaatctctatggaagattaaagagtggatcaaaacatctttcattc 10552925  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  10552924 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttct 10552853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 18522840 - 18522658
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  18522840 ctaaaattccactatctttcacccaccaacgatcaaacaatcctgatgttcaattaatctatatggaagattaaagagtgaatcaaaacatctttcattc 18522741  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||| |||||||| | |||||||||    
T  18522740 atacttgattgcatataaataagtgaat-ttttcttctttttcaataacaatggtttcaattttcttcttcttgttcaactgca 18522658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 24478258 - 24478075
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  24478258 ctaaaatttcactctctttcaccaaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaatagtgaatcaaaacatctttcattc 24478159  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| | |||||||||    
T  24478158 atactcgattgcatataaataagtaaattttttcttccttttcaataacgttggtttcaattttcttcttcttgttcaactgca 24478075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 37106854 - 37106670
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37106854 ctaaaatttcactctctttcacccaccaacgatcaaacaatcttgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 37106755  T
Q  109 atacttgattgcatataaataagtgaatt-ttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||||  |||||||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||| | |||||||||    
T  37106754 atactcaattgcatataaataagtgaatttttttcttctttttcaataatgctggtttcaattttcttcttcttgttcaactgca 37106670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 10665411 - 10665594
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||  ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10665411 ctaaaattttactctctttcacccatcaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 10665510  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||| | | |||||||||    
T  10665511 atactcgattgcatataaataagtgaattttttcttctttttcaatagcgctggtttcaattttcttctttttgttcaactgca 10665594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 37274047 - 37274230
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  37274047 ctaaaattccactctctttcacccaccaatgatcaaacaatcctgatgtttaattaatttctatggaagattaaagagtgaatcaaaacatctttcattc 37274146  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||  | ||||||||| |||||||| | |||||||||    
T  37274147 atactcgattgcatataaataagtgaattttttcttctttttcaataacgccgatttcaattttcttcttcttgttcaactgca 37274230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 18979303 - 18979122
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||| | ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18979303 ctaaaacttcactctctttcacccaccaacgatcaaacaattctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 18979204  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  ||||||| | |||||||    
T  18979203 atactcgattgcatataaataagtgaattttttcttctttttcaataatgctggtttcaattttgttcttcttgttcaactg 18979122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 13210295 - 13210479
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  13210295 ctaaaattccactctctttcacccaccaacgatcaaacaattctaatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctctcattc 13210394  T
Q  109 atacttgattgcatataaataagtgaa-ttttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  13210395 atactcgattgcatataaataagtgaattttttttttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 13210479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 9 - 190
Target Start/End: Original strand, 43547840 - 43548021
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||| | ||||||||| |||||||||||    
T  43547840 ctaaaatttcactctctttcaccaaccaacgatcaaacaatcatgatgttcaattaatctatgtggaagattaaagagcgaatcaaaatatctttcattc 43547939  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| | |||||||    
T  43547940 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttgttcttcttgttcaactg 43548021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 8048082 - 8048253
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||| |||||||||||||| |||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8048082 ctaaaaatccactctctttcatccaccaacgatcaaacaattctgatgtttaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 8048181  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||  |||||||||||| ||||||||    
T  8048182 atactcgattgcatataaataagtgaattttttcttcttttttaataacactggtttcaattttcttcttct 8048253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 31499654 - 31499483
Alignment:
Q  18 cactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgat 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||        
T  31499654 cactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatgaaagattaaagagtgaattaaaacatctttcattcatact---c 31499558  T
Q  118 tgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  31499557 tgcatataaataagtgaattttttattctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 31499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 70 - 192
Target Start/End: Complemental strand, 31485439 - 31485317
Alignment:
Q  70 tatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaat 169  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31485439 tatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaat 31485340  T
Q  170 ttacttcttctcgctcaactgca 192  Q
    || |||||||| | |||||||||    
T  31485339 tttcttcttcttgttcaactgca 31485317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 37341670 - 37341548
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattca 109  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  37341670 taaaatttcactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatgaaagattaaagagtgaatcaaaacatctttcattca 37341571  T
Q  110 tacttgattgcatataaataagt 132  Q
    |||| |||| |||||||||||||    
T  37341570 tactcgattacatataaataagt 37341548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 192
Target Start/End: Original strand, 12188669 - 12188774
Alignment:
Q  87 tgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctca 186  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| | | |||||||||| |||||||| | |||    
T  12188669 tgaatcaaaacatcgttcatccatacttgattgcatataagtaagtgaatttcttcttctttttcaataatgatagtttcaattttcttcttcttgttca 12188768  T
Q  187 actgca 192  Q
    ||||||    
T  12188769 actgca 12188774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 165
Target Start/End: Original strand, 29385664 - 29385794
Alignment:
Q  36 aacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataa--ataagtg 133  Q
    ||||||||| ||||| |||||||||||  |||| ||||||||||||||  |||||| ||||||||||||||| ||||||||||||||||||  | |||||    
T  29385664 aacgatcaatcaatc-tgatgttcaatcgatctttatggaagattaaatagtgaattaaaacatctttcattaatacttgattgcatataattaaaagtg 29385762  T
Q  134 aattttttcttctttttcaataacgttggttt 165  Q
    ||||| || |||||||||||||| ||| ||||    
T  29385763 aatttcttattctttttcaataaagttagttt 29385794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 27309758 - 27309651
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctc---tatggaagattaaagcgtgaatcaaaacatctttca 105  Q
    |||||||||||||||||||||||||  ||| ||||||||| | ||||||||||| ||||||   ||||||||||||||| ||||||||||| || |||||    
T  27309758 ctaaaattccactctctttcacccagaaacaatcaaacaaacctgatgttcaatcaatctctgttatggaagattaaagagtgaatcaaaatatttttca 27309659  T
Q  106 ttcatact 113  Q
    | ||||||    
T  27309658 tccatact 27309651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 36294690 - 36294609
Alignment:
Q  99 tctttcattcatacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    |||||||| |||||| |||||||||||| |  |||||||| ||||||||||||| ||| | | |||||||||| ||||||||    
T  36294690 tctttcatccatactcgattgcatataagtgtgtgaatttcttcttctttttcagtaatgctagtttcaatttgcttcttct 36294609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 171
Target Start/End: Original strand, 35318796 - 35318885
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaattt 171  Q
    ||||||| ||||||||||||||||||| | |||||| |||||||||| | ||||| ||||||||    || |||||||| ||| ||||||||||    
T  35318796 attaaagagtgaatcaaaacatctttcttccatactcgattgcatattagtaagtcaatttttt----ttcttcaataatgttagtttcaattt 35318885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 13145350 - 13145418
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  13145350 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 13145418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 19034181 - 19034249
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  19034181 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 19034249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 19617063 - 19617131
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  19617063 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 19617131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 24559719 - 24559651
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  24559719 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 24559651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 24600752 - 24600684
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  24600752 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 24600684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 25085627 - 25085559
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  25085627 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 25085559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 25143599 - 25143531
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  25143599 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 25143531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 29921067 - 29920999
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||| | || |||||| ||||||  |||| |||||| |||||||||||||||||||    
T  29921067 attaaagagtgaatcaacatatttttcatccatactcaattggatataagtaagtgaattttttcttct 29920999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 31485485 - 31485445
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaat 49  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  31485485 ctaaaattccattctctttcaaccaccaacgatcaaacaat 31485445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 31510903 - 31510971
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  31510903 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 31510971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 33281477 - 33281409
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  33281477 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 33281409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 37866500 - 37866432
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  37866500 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 37866432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 43293143 - 43293211
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  43293143 attaaagggtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 43293211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 43517753 - 43517821
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||| |||||||||||||||    
T  43517753 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaattgaattttttcttct 43517821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 4155612 - 4155672
Alignment:
Q  86 gtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  4155612 gtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 4155672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 9066308 - 9066240
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || ||||||  |||||  |||| |||||| ||||||||||| |||||||    
T  9066308 attaaagagtgaatcaaaatatttttcatctatactcaattggatataagtaagtgaatttcttcttct 9066240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 1523660 - 1523477
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1523660 ctaaaatttcactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 1523561  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| | |||||||||    
T  1523560 atactcgattgcatataaataagtgaattttttcttcttttttaataacgctggtttcaattttcttcttcttgttcaactgca 1523477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 13961673 - 13961844
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13961673 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 13961772  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  13961773 atactcgattgcatataaataaatgaattttttcttctttttcaataacgctggtttcaattttcttcttct 13961844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 35338930 - 35339113
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  35338930 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatgtttcattc 35339029  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  35339030 atacccgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 35339113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 36852532 - 36852349
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36852532 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 36852433  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | | |||||||||    
T  36852432 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttgttgttcaactgca 36852349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 9 - 191
Target Start/End: Complemental strand, 3027309 - 3027125
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtg--aatcaaaacatctttcat 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  3027309 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgtgaatcaaaacatctttcat 3027210  T
Q  107 tcatacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgc 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | | ||||||||    
T  3027209 tcatacttgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttctttttgttcaactgc 3027125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 32933487 - 32933318
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32933487 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 32933388  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttctt 178  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  32933387 atactcgattgcatataaatatgtgaattttttcttctttttcaataacgctggtttcaattttcttctt 32933318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 48991244 - 48991061
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  48991244 ctaaaattccactttctttcacccaccaacgatcaaacaatcttgatgttcaattaatctctatgtaagattaaagagtgaatcaaaacgtctttcattc 48991145  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  48991144 atactcaattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaattttcttcttcttgttcaactgca 48991061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 30215097 - 30215279
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattca 109  Q
    ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  30215097 taaaatttcactatctttcacccaccaacgatcaaacaatcctgatgttcaattactctgtatggaagattaaagagtgaatcaaaacatctttcattca 30215196  T
Q  110 tacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  30215197 tactcgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaattttcttcttcttgttcaactgca 30215279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 7318995 - 7318814
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  7318995 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctgatgtttaattaatctctatggaagattaaaaagtggatcaaaacatctttcattc 7318896  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||    
T  7318895 atactcgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaattttcttcttcttgttcaactg 7318814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 37829732 - 37829549
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37829732 ctaaaatttcactctctttcacccaccaacaatcaaacaataaagatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 37829633  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  37829632 atactcaattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 37829549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 47466748 - 47466931
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  47466748 ctaaaattctactatctttcacccaccaacgatcaaacaatcctgatattcaattaatctttatggaagattaaagagtaaatcaaaacatctttcattc 47466847  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  47466848 atactcgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaattttcttcttcttgttcaactgca 47466931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 34160192 - 34160012
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  34160192 ctaaaattccactctctttcacccatcaacgatcaaacaatcttgatgttcagttaatctctatggaagattaaagagtgaatcaaaacatctttcattc 34160093  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaact 189  Q
     |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||| | ||||||    
T  34160092 gtactcgattgcatataaataagtgaattttttcttctttttcaataatgctggtttcaattttcttcttcttgttcaact 34160012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 50469861 - 50469678
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||  |||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50469861 ctaaaatttaactctctttcacccac-aacaatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 50469763  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgcag 193  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  50469762 atactcgattacatataaataagtgaattttttcttctttttcaataacgttggtttcaattttcttcttcttgttcaactgcag 50469678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 43457594 - 43457777
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43457594 ctaaaatttcactctctttcacccatcaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 43457693  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| |||||| | | |||||||||    
T  43457694 atactcgattgcatataaataagtgaattttttcttcttttccaatagcgctggtttcaattttcttctttttgttcaactgca 43457777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 51323352 - 51323169
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  51323352 ctaaaattccattctctttcatccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 51323253  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||| || |||| |||| |||||||| | |||||||||    
T  51323252 atactcgattgcatataaataagtgatttttttcttctttttcaataacgctgatttcgattttcttcttcttgttcaactgca 51323169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 41201647 - 41201809
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  41201647 ctaaaatttcactctctttcacccaccaacgatcaaacaattctgatgttcaattaatctctatggaagattaaaaagtgaatcaaaacatctttcattc 41201746  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaattt 171  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41201747 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattt 41201809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 40431106 - 40430934
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgtt-caattaatctctatggaagattaaagcgtgaatcaaaacatctttcatt 107  Q
    |||||||||||||||||||| |||| |||||||||||||||| ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  40431106 ctaaaattccactctctttcccccatcaacgatcaaacaatcctgatgttgcaattaatctctatagaagattaaagagtgaatcaaaacatctttcatt 40431007  T
Q  108 catacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  40431006 catactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttct 40430934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 3025605 - 3025776
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  3025605 ctaaaatttcactctctttcacccaccaacgatcaaacaatcctaatgttcaattaatctctatgaaagattaaagagtgaatcaaaacatctttcattc 3025704  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| | | |||||||||| ||||||||    
T  3025705 atactcgattgcatataaataagtgaattttttcttctttttcaataatgctagtttcaattttcttcttct 3025776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 11691691 - 11691520
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||||    
T  11691691 ctaaaattccactctctttcacccatcaacgatcaaacaatcctgatgttcaattaatctctatagaagattaaagagtgaataaaaacatatttcattc 11691592  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  11691591 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattgtcttcttct 11691520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 24035327 - 24035144
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| || ||||| |||||||||||||||||    
T  24035327 ctaaaattccactctctttcacccaccaacgatcaaacaattctgatgttcaattaatctctatgaaagattagagagtgaaccaaaacatctttcattc 24035228  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  24035227 atactcgattgcatataaataatcgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 24035144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 48639 - 48821
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattca 109  Q
    |||||||  |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||    
T  48639 taaaattttactctcttgcacccaccaacgatcaaacaatcctgatgttcaattattctctatggaagattaaagagtgaatcaaaatatctttcattca 48738  T
Q  110 tacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||| | |||||||||    
T  48739 tactcgattgcatataaataagtgaattttttcttcattttcaataacgctggtttcaattttcttcttcttgttcaactgca 48821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 43620945 - 43621129
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  43620945 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttca-tc 43621043  T
Q  109 atacttgattgcatataaataagtgaa--ttttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||| | |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||| |||||||| | |||||||||    
T  43621044 atattcgattgcatataaataagtgaattttttttcttctttttcaataacgctagtttcaattttcttcttcttgttcaactgca 43621129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 10480616 - 10480798
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10480616 ctaaaattccactctcttgcacccaccaacgatcaaaaaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 10480715  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||| | | |||||||||    
T  10480716 atactcgattgcatataaataagtgaa-tttttcttctttttcaataatgctggttttaattttcttcttattgttcaactgca 10480798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 20292615 - 20292797
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattca 109  Q
    ||||||||||  |||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20292615 taaaattccatcctctttcacccaccaaggatcaaacaatcctgatattcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattca 20292714  T
Q  110 tacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| |||||| | | |||||||||    
T  20292715 tactcgattgcatataaataagtgaattttttcttctttttcaataacgctgatttcagttttcttcttgttgttcaactgca 20292797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 22847812 - 22847631
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||    
T  22847812 ctaaaatttcactctctttcaccaaccaacgatcaaacaatcctgatgttcaattaatctctatagaagattaaagagtgaatcaaaatatatttcattc 22847713  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  ||||||| | |||||||    
T  22847712 atactcgattgcatataaataagtgaatttattcttctttttcaataacgctggtttcaattttgttcttcttgttcaactg 22847631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 47429028 - 47429211
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||||||||||||| |||||||| | | ||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47429028 ctaaaatttcactctctttcacccaccaacgattaaacaatcctaacgtttaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 47429127  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||| | ||||||||| ||||||||||||||||| |||||||||||||||  |||||||||||| |||||||  | |||||||||    
T  47429128 atattcgattgcataaaaataagtgaatttttttttctttttcaataacactggtttcaattttcttcttcctgttcaactgca 47429211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 180
Target Start/End: Complemental strand, 15659296 - 15659140
Alignment:
Q  25 tttcacccaccaacgatcaaacaatcatgatgttcaattaatctctat-ggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcata 123  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||||  || ||||||||||||||||||||| |||  ||||| ||    
T  15659296 tttcaaccaccaacgatcaaacaatcccgatgttcaattaatctctattggaagattaaaaagtaaatcaaaacatctttcattcacactcaattgctta 15659197  T
Q  124 taaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    |||||||||||||||||||||| |||||||||||| | |||||||||| ||||||||    
T  15659196 taaataagtgaattttttcttccttttcaataacgctagtttcaattttcttcttct 15659140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 8713957 - 8713853
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||| |||||| ||||| |||| |||||||||| ||||||||||||||||||||| |    
T  8713957 ctaaaattccattatctttcacccacaaacgatcaaacaatcatgatattcaatcaatctttatgtaagattaaagagtgaatcaaaacatctttcatcc 8713858  T
Q  109 atact 113  Q
    |||||    
T  8713857 atact 8713853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 37682597 - 37682699
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| || |||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||| |||||| |||||||||||||| |    
T  37682597 ctaaaatttcaatctctttcacccacaaacgatcaaacaattctgatgttcaatcaatctctatggaagattaaagagtgaattaaaacatctttcatcc 37682696  T
Q  109 ata 111  Q
    |||    
T  37682697 ata 37682699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 15506492 - 15506402
Alignment:
Q  64 aatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttctttttcaat 154  Q
    ||||| ||| ||||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||| ||||||| |||||||||||||||    
T  15506492 aatctttatagaagattaaagagtgaatcaaaacatctttcattcatactctattgcatataagtaattgaatttcttcttctttttcaat 15506402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 32136213 - 32136050
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||        ||||||| |||||||||||||||||||||||    
T  32136213 ctaaaattccaatctctttcacccacaaacgatcaaacaatcctgatgttcaatcaatctc--------attaaagagtgaatcaaaacatctttcattc 32136122  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| || |||            |||||| ||||||||||||||||| | | |||||||||| |||||||| | |||||||||    
T  32136121 atactcgactgc------------gaatttcttcttctttttcaataatgatagtttcaattttcttcttcttgttcaactgca 32136050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 24897649 - 24897536
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctct---atggaagattaaagcgtgaatcaaaacatctttcat 106  Q
    |||||||||||| ||||||||||   ||||||||| ||| | ||||||||||| |||||||   |||||||||||||| ||||||||||| || ||||||    
T  24897649 taaaattccactatctttcaccctaaaacgatcaatcaaacctgatgttcaatcaatctctgttatggaagattaaagagtgaatcaaaatatttttcat 24897550  T
Q  107 tcatacttgattgc 120  Q
     |||||| ||||||    
T  24897549 ccatactcgattgc 24897536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 1536887 - 1536800
Alignment:
Q  53 gatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaatttttt 141  Q
    |||||||||| |||||| || ||||||||||| |||||| |||||||||||||| ||||||  ||||||||||| ||||||| ||||||    
T  1536887 gatgttcaatcaatctc-atagaagattaaagagtgaattaaaacatctttcatccatactctattgcatataagtaagtgattttttt 1536800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 7818396 - 7818283
Alignment:
Q  42 caaacaatcatga-tgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttt 140  Q
    ||||||||||||| |||||| | ||| |||||  |||||||||| ||||||| |||||||||||||  |||||  | ||||||||| ||| ||||||| |    
T  7818396 caaacaatcatgaatgttcagtcaatttctataaaagattaaagagtgaatcgaaacatctttcatctatactctaatgcatataagtaattgaatttct 7818297  T
Q  141 tcttctttttcaat 154  Q
     |||||||||||||    
T  7818296 ccttctttttcaat 7818283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 50562068 - 50562017
Alignment:
Q  129 aagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||||||||||||||||||||| |||||| ||||||||||||  |||||||    
T  50562068 aagtgaattttttcttctttttcgataacgctggtttcaattttattcttct 50562017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 53874467 - 53874575
Alignment:
Q  38 cgatcaaacaatcatgatgttcaatt--aatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaa 135  Q
    ||||||||||||  |||||||||||   |||||||||| || ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||    
T  53874467 cgatcaaacaatt-tgatgttcaatatcaatctctatgaaa-attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaa 53874564  T
Q  136 ttttttcttct 146  Q
    ||| |||||||    
T  53874565 tttcttcttct 53874575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 22301183 - 22301244
Alignment:
Q  131 gtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||||||| ||||||||||||||||| | | |||||||||| |||||||| | |||||||||    
T  22301183 gtgaatttcttcttctttttcaataatgctagtttcaattttcttcttcttgttcaactgca 22301244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 48348802 - 48348859
Alignment:
Q  75 aagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagt 132  Q
    |||||||||  || ||| |||| |||||||||||||||| ||||||||||||||||||    
T  48348802 aagattaaatagtaaattaaaatatctttcattcatactcgattgcatataaataagt 48348859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 20434737 - 20434669
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  20434737 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 20434669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 20738372 - 20738304
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  20738372 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 20738304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 23894658 - 23894726
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  23894658 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 23894726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 25858287 - 25858219
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  25858287 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 25858219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 31710470 - 31710402
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  31710470 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 31710402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 39539930 - 39539998
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  39539930 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 39539998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 42349325 - 42349257
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  42349325 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 42349257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 46563946 - 46564014
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  46563946 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 46564014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 51396370 - 51396418
Alignment:
Q  86 gtgaatcaaaacatctttcattcatacttgattgcatataaataagtga 134  Q
    ||||||||||||||||||||| ||| || |||| |||||||||||||||    
T  51396370 gtgaatcaaaacatctttcatccatgctcgattacatataaataagtga 51396418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 52912623 - 52912691
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  52912623 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 52912691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 55182990 - 55183058
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  55182990 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 55183058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 56017911 - 56017979
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  56017911 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 56017979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 37233596 - 37233704
Alignment:
Q  38 cgatcaaacaatcatgatgttcaatt--aatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaa 135  Q
    ||||||||||||  |||||||||||   |||||||||| || ||||||| |||||||||||  | |||||| ||||||  |||| |||||| ||||||||    
T  37233596 cgatcaaacaatt-tgatgttcaatatcaatctctatgaaa-attaaagagtgaatcaaaatttttttcatccatactcaattggatataagtaagtgaa 37233693  T
Q  136 ttttttcttct 146  Q
    ||| |||||||    
T  37233694 tttcttcttct 37233704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 8713845 - 8713788
Alignment:
Q  133 gaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    |||||| ||||||||||||||||| | | |||||||||| |||||||| | |||||||    
T  8713845 gaatttcttcttctttttcaataatgctagtttcaattttcttcttcttgttcaactg 8713788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 10541579 - 10541647
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||| ||||||| |||||||    
T  10541579 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaattgaatttcttcttct 10541647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 42131051 - 42131119
Alignment:
Q  76 agattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttctt 144  Q
    ||||| ||| || |||||||||||||||||||||||||  |||  |||||| ||| ||||||| |||||    
T  42131051 agatttaagagtaaatcaaaacatctttcattcatactatattatatataagtaattgaatttcttctt 42131119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 42723604 - 42723672
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| | ||||||||| |||||||    
T  42723604 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtgagtgaatttcttcttct 42723672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 55215074 - 55215134
Alignment:
Q  86 gtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  55215074 gtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 55215134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 55220484 - 55220424
Alignment:
Q  86 gtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  55220484 gtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 55220424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 56363328 - 56363260
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||  |||||| ||||||||||| |||||||    
T  56363328 attaaagagtgaatcaaaatatttttcatccatactaaattagatataagtaagtgaatttcttcttct 56363260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 152; Significance: 1e-80; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 35155003 - 35155186
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  35155003 ctaaaattccactctctttcacccaccaacgatcaaataatcatgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatttttcattc 35155102  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  35155103 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 35155186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 48585487 - 48585307
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |    
T  48585487 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctcaatggaagattaaagagtgaatcaaaacatctttcatcc 48585388  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaact 189  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||    
T  48585387 atactcgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaattttcttcttcttgttcaact 48585307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 28412109 - 28411938
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  28412109 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctttatggaagattaaagagtgaatcaaaacatctttcattc 28412010  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  28412009 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttct 28411938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 35232960 - 35233143
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  35232960 ctaaaatttcactctctttcacccaccaacaatcaaacaatcatgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatttttcattc 35233059  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  35233060 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 35233143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 36231877 - 36232060
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36231877 ctaaaatttcactctctttcacccaccaacgatcaaacaatcccgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 36231976  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  36231977 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 36232060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 49779090 - 49779261
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  49779090 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtaaatcaaaacatctttcattc 49779189  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  49779190 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttcttcttct 49779261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 14279713 - 14279542
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  14279713 ctaaaattccactatctttcacccaccaacgatcaaacaatcatgatgttcaattaatttctatgaaagattaaagagtgaatcaaaacatctttcattc 14279614  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  14279613 atactcgattgcatataaataagtgaattttttcttctttttcaataatgttggtttcaattttcttcttct 14279542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 19942441 - 19942270
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19942441 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 19942342  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||||    
T  19942341 atactcgattgcatataaataagtgaattttttcttttttttcaataacgctggtttcaatttttttcttct 19942270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 190
Target Start/End: Original strand, 44353614 - 44353795
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44353614 ctaaaatttcactctctttcacccacctacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 44353713  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| | |||||||    
T  44353714 atactcgattgcatataaataagtgaattttttcttctttttcaataacgctggtttcaattttgttcttcttgttcaactg 44353795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 7680448 - 7680630
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7680448 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattc 7680547  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| ||||||||||||||||  ||| |||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  7680548 atactcgattgcatataaataatcgaa-tttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 7680630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 2612548 - 2612731
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||| |||| ||||||| |||||||||||||| ||||||||    
T  2612548 ctaaaattccactctctttcacccaccaacgatcaaacaattctgatattcaattaatctctacggaaaattaaagagtgaatcaaaacatttttcattc 2612647  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  2612648 atactcgattgcatataaataagtgatttttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 2612731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 30419544 - 30419362
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  30419544 ctaaaatttcactctctttcacccacctacgatcaaacaatcctgatgttcaattaatctctatggaagattaaaaagtgaatcaaaacatctttcattc 30419445  T
Q  109 atacttgattgcatataaataagtgaattttttc-ttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    ||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||  ||||||| | |||||||    
T  30419444 atactcgattgcatataaataagtgaattttttctttttttttcaataacgttggtttcaattttgttcttcttgttcaactg 30419362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 52343636 - 52343456
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  52343636 ctaaaattccactctctttcacccgccaacgatcaagcaatcctgatgttcaattaatctctatgaaagattaaagagtgaatcaaaacatctttcattc 52343537  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactg 190  Q
    ||||| |||||||||||||||||||||| ||||||||||||| ||||||| | |||||||||| |||||||| | |||||||    
T  52343536 atactcgattgcatataaataagtgaat-ttttcttcttttttaataacgctagtttcaattttcttcttcttgttcaactg 52343456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 4595774 - 4595956
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||| |||||| ||||||||||| ||| |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||    
T  4595774 ctaaaatttcactc-ctttcatccaccaacgataaaaaaatcctgatgttcaattaatctttatggaagattaaagagtgaatcaaaacatcttccattc 4595872  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||| || ||||||||| |||||||| | |||||||||    
T  4595873 atactcgattgcatataaataagtgaatcttttcttctttttcaataacgctgatttcaattttcttcttcttgttcaactgca 4595956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 38144467 - 38144630
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  38144467 ctaaaatttcactctctttcacacaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaattaaaacatctttcattc 38144566  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||| ||||||||||||||||||||        |||||||||||||||||||||||||||||  |||||||    
T  38144567 atactcgattgcatataaataagtga--------ttctttttcaataacgttggtttcaatttttttcttct 38144630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 24200310 - 24200137
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattca 109  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |    
T  24200310 taaaattccactctctttcacccaccaacgatcaaacaatcttgatgttcaattaatctctatcgaagattaaagagtgaatcaaaatatctttcattta 24200211  T
Q  110 tacttgattgcatataaataagtgaat---tttttcttctttttcaataacgttggtttcaatttacttcttct 180  Q
    ||||  |||||||||||||||||||||   | | | || ||||||||||||  | |||||||||| ||||||||    
T  24200210 tactcaattgcatataaataagtgaatatatatattttttttttcaataacactagtttcaattttcttcttct 24200137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 41589542 - 41589371
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |    
T  41589542 ctaaaattccaatctctttcacccacaaacgatcaaacaatcctgatgttcaatcaatctctatggaagattaaagagtgaatcaaaacatctttcatcc 41589443  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    ||||| || |||            |||||| ||||||||||||||||| | | |||||||||| |||||||| | |||||||||    
T  41589442 atactcgactgc------------gaatttcttcttctttttcaataatgctagtttcaattttcttcttcttgttcaactgca 41589371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 36840010 - 36840125
Alignment:
Q  76 agattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttactt 175  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||| |||    
T  36840010 agattaaagagtgaatcaaaacatctttcattcatactcgattgcatataaataagtggatttttt-ttctttttcaataacgctggtttcaattttctt 36840108  T
Q  176 cttctcgctcaactgca 192  Q
    ||||| | |||||||||    
T  36840109 cttcttgttcaactgca 36840125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 192
Target Start/End: Original strand, 8947233 - 8947367
Alignment:
Q  57 ttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttctttttcaataa 156  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||||| ||| |||||||| ||||||||||| |||||||||||||||||    
T  8947233 ttcaatcaatttctatggaagattaaagagtgaatcaaaacatctttcatccatactcgatagcatataagtaagtgaatttcttcttctttttcaataa 8947332  T
Q  157 cgttggtttcaatttacttcttctcgctcaactgca 192  Q
     | | ||||||||||  ||||||| |||||||||||    
T  8947333 tgctagtttcaattt-tttcttcttgctcaactgca 8947367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 47097625 - 47097769
Alignment:
Q  25 tttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatat 124  Q
    |||||||||| ||||||||||||||  ||||||||||| ||||| |||||||||||||||  |||||||||||| ||||||| |||||||||||||||||    
T  47097625 tttcacccacaaacgatcaaacaatactgatgttcaatcaatctttatggaagattaaagaatgaatcaaaacacctttcatccatacttgattgcatat 47097724  T
Q  125 aaataagtgaattttttcttctttttcaataacgttggtttcaattt 171  Q
    || ||| ||||||| ||||  ||||||||||| | | ||||||||||    
T  47097725 aagtaaatgaatttcttct--tttttcaataatgctagtttcaattt 47097769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 52813790 - 52813682
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    ||||||||||||| | ||| |||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| ||||||||||| |||||||||||    
T  52813790 ctaaaattccacttttttt-acccaccaacgatcaaacaatcctgatgttcaattagtctatatggaagattaaagagtgaatcaaaatatctttcattc 52813692  T
Q  109 atacttgatt 118  Q
    ||||| ||||    
T  52813691 atactcgatt 52813682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 36835517 - 36835589
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagatta 81  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  36835517 ctaaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctcaatggaagatta 36835589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 54556934 - 54556790
Alignment:
Q  22 ctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgca 121  Q
    ||||||||||||| |||||||||| ||| |||||||||||| ||| ||||||||||| ||    ||||||| ||| ||||||||| |||||| |||||||    
T  54556934 ctctttcacccacaaacgatcaaataat-atgatgttcaatcaatttctatggaagaata----gtgaatccaaatatctttcatccatactcgattgca 54556840  T
Q  122 tataaataagtgaattttttcttctttttcaataacgttggtttcaattt 171  Q
    ||||| ||| ||||||| ||||||||||||||||| | | ||||||||||    
T  54556839 tataagtaaatgaatttcttcttctttttcaataatgctagtttcaattt 54556790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 154
Target Start/End: Complemental strand, 31608320 - 31608209
Alignment:
Q  44 aacaatcatg-atgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttc 142  Q
    |||||||||| ||||||||| ||||||||| |||||||||||  | ||||||| |||||||||| ||||||| ||||||||||| ||||||||||| |||    
T  31608320 aacaatcatggatgttcaatcaatctctatagaagattaaagaataaatcaaagcatctttcatccatactttattgcatataagtaagtgaatttcttc 31608221  T
Q  143 ttctttttcaat 154  Q
    ||||||| ||||    
T  31608220 ttcttttccaat 31608209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 39626275 - 39626396
Alignment:
Q  72 tggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttc-aatt 170  Q
    |||||| |||||| |||||| ||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||||||| | | ||||| ||||    
T  39626275 tggaaggttaaagagtgaattaaaacatctttcattcatactcgattgcatataagcaagtgaatttcgtcttctttttcaataatgctagtttcaaatt 39626374  T
Q  171 tacttcttctcgctcaactgca 192  Q
    | |||||||| | |||||||||    
T  39626375 ttcttcttcttgttcaactgca 39626396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 23483248 - 23483149
Alignment:
Q  53 gatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttctttttca 152  Q
    |||| ||||| ||||| ||| ||||||||||| ||||||||||||||||||| | ||||||  ||||||||||||||| ||||||| |||||||||||||    
T  23483248 gatggtcaatcaatctatatagaagattaaagagtgaatcaaaacatctttcgtccatactctattgcatataaataattgaatttcttcttctttttca 23483149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 50507783 - 50507888
Alignment:
Q  42 caaacaatcatga-tgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttt 140  Q
    ||||||||||||| |||||||| ||||| | | ||||||||||  |||||||| |||||||||||| |||||||||||||       ||||||||||| |    
T  50507783 caaacaatcatgaatgttcaatcaatctttgtagaagattaaaa-gtgaatcataacatctttcatccatacttgattgc-------taagtgaatttct 50507874  T
Q  141 tcttctttttcaat 154  Q
    ||||||||||||||    
T  50507875 tcttctttttcaat 50507888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 154
Target Start/End: Original strand, 24989776 - 24989883
Alignment:
Q  44 aacaatcat-gatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttc 142  Q
    ||||||||| |||||||||| ||||||||| ||||||||||| || ||||||| |||||||||   ||||    |||||||||  ||||| ||||| |||    
T  24989776 aacaatcatagatgttcaatcaatctctatagaagattaaagagttaatcaaagcatctttcaacgatac----ttgcatatatgtaagtaaatttcttc 24989871  T
Q  143 ttctttttcaat 154  Q
    ||||||||||||    
T  24989872 ttctttttcaat 24989883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 33393227 - 33393140
Alignment:
Q  36 aacgatcaaacaatcatgatgttcaattaatctct---atggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgc 120  Q
    |||||| |||||| | ||||||||||| |||||||   || ||||||||||| |||||||||||||| |||||| |||||| ||||||    
T  33393227 aacgataaaacaaacttgatgttcaatcaatctctgttatagaagattaaagagtgaatcaaaacatttttcatccatactcgattgc 33393140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 22781271 - 22781339
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||||||||||||||| |||||||    
T  22781271 attaaagagtgaatcaaaatatttttcatccatactcaattggatataaataagtgaatttcttcttct 22781339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 24395824 - 24395756
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| |||||||||||||||||||    
T  24395824 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaattttttcttct 24395756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 85277 - 85209
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  85277 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttattcttct 85209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 672698 - 672630
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  672698 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 672630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 4515467 - 4515535
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  4515467 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 4515535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 7678831 - 7678899
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  7678831 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttattcttct 7678899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 10840856 - 10840924
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  10840856 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 10840924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 10999214 - 10999282
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  10999214 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 10999282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 20834973 - 20835041
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  20834973 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 20835041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 33712145 - 33712213
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  33712145 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 33712213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 38871750 - 38871682
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  38871750 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 38871682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 53974907 - 53974839
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  53974907 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 53974839  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 6267755 - 6267823
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||| ||  |||| |||||| ||||||||||| |||||||    
T  6267755 attaaagagtgaatcaaaatatttttcatccatcctcaattggatataagtaagtgaatttcttcttct 6267823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 20048933 - 20048865
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| |||||| |||| || |||||| ||||||  |||| |||||| ||| |||||||||||||||    
T  20048933 attaaagagtgaatgaaaatatttttcatccatactcaattggatataagtaattgaattttttcttct 20048865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 32236925 - 32236857
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||   ||| |||||| ||||||||||| |||||||    
T  32236925 attaaagagtgaatcaaaatatttttcatccatactcagttggatataagtaagtgaatttcttcttct 32236857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 33967544 - 33967476
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || || ||| ||||||  |||| |||||| ||||||||||| |||||||    
T  33967544 attaaagagtgaatcaaaatattttccatccatactcaattggatataagtaagtgaatttcttcttct 33967476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 40585586 - 40585654
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| ||  ||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  40585586 attaaagagtgaatcaaaatattcttcatccatactcaattggatataagtaagtgaatttcttcttct 40585654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 266 - 82
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  266 ctaaaattacactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctatatggaagattaaagagtgaatcaaaacatctttcattc 167  T
Q  109 atacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgcag 193  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | ||||||||||    
T  166 atactcgattgcatataaataagtgaattttttcttctttttcaataacgatggtttcaattttcttcttcttgttcaactgcag 82  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 9441 - 9261
Alignment:
Q  10 taaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattca 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  9441 taaaattccactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctctatgaaagattaaagagtgaatcaaaaca-ctttcattca 9343  T
Q  110 tacttgattgcatataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| |||||||| | |||||||||    
T  9342 tactcgattgcatataaacaagtgaattttttctt-tttttcaataacgctggtttcaattttcttcttcttgttcaactgca 9261  T

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Target: scaffold0003 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 365192 - 365362
Alignment:
Q  22 ctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgca 121  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  365192 ctctttcacccaccaacgatcaaacaatttcgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttcattcatactcgattgca 365291  T
Q  122 tataaataagtgaattttttcttctttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    | |||||||  |||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  365292 tctaaataatcgaattttttcttctttttcaataacgctggtttcaattttcttcttcttgttcaactgca 365362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 94; Significance: 5e-46; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 47 - 192
Target Start/End: Complemental strand, 200600 - 200455
Alignment:
Q  47 aatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||| |||| |||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  200600 aatcctgatgttcaattaatctttatggaagattaaagagtgaataaaaatatctttcattcatactcgattgcatatgaataagtgatttttttcttct 200501  T
Q  147 ttttcaataacgttggtttcaatttacttcttctcgctcaactgca 192  Q
    |||||||||| | |||||||||||| |||||||| | |||||||||    
T  200500 ttttcaataatgctggtttcaattttcttcttcttgttcaactgca 200455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 156544 - 156612
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  156544 attaaagagtgaatcaaaatatttttcatacatactcaattgaatataagtaagtgaatttcttcttct 156612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 200689 - 200653
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaa 45  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  200689 ctaaaatttcactctctttcactcaccaacgatcaaa 200653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 101 - 1
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattc 108  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  101 ctaaaattacactctctttcacccaccaacgatcaaacaatcctgatgttcaattaatctatatggaagattaaagagtgaatcaaaacatctttcattc 2  T
Q  109 a 109  Q
    |    
T  1 a 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 6913 - 7009
Alignment:
Q  9 ctaaaattccactctctttcacccaccaacgatcaaacaatcatgatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttca 105  Q
    |||||||| ||| |||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6913 ctaaaattacacactctttaaaccaccaacgatcaaacaatcctgatgttcaattaatctctatggaagattaaagagtgaatcaaaacatctttca 7009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 3866 - 3965
Alignment:
Q  53 gatgttcaattaatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttctttttca 152  Q
    |||| ||||| ||||||||| ||||||||||  ||||||||||| ||||||| | ||||||  ||||||||||||||| ||||||| |||||||||||||    
T  3866 gatggtcaatcaatctctatagaagattaaaaagtgaatcaaaatatctttcgtccatactctattgcatataaataattgaatttcttcttctttttca 3965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 41152 - 41084
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| ||||||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  41152 attaaagagtgaatcaaaatatctttcatccatactcaattggatataagtaagtgaatttcttcttct 41084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 1524 - 1632
Alignment:
Q  38 cgatcaaacaatcatgatgttcaatt--aatctctatggaagattaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaa 135  Q
    ||||||||||||| |||||||||||   |||||| ||| || ||||||| || |||||||| || |||||||||||||  |||| |||||| ||||||||    
T  1524 cgatcaaacaatc-tgatgttcaatatcaatctccatgaaa-attaaagagtaaatcaaaatatttttcattcatactcaattggatataagtaagtgaa 1621  T
Q  136 ttttttcttct 146  Q
    ||| |||||||    
T  1622 tttcttcttct 1632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 4637 - 4569
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  4637 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttcttcttct 4569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 37533 - 37601
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||| |||||| ||||||||||| |||||||    
T  37533 attaaagagtgaatcaaaatatttttcatccatactcaattggatataagtaagtgaatttattcttct 37601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 14488 - 14420
Alignment:
Q  78 attaaagcgtgaatcaaaacatctttcattcatacttgattgcatataaataagtgaattttttcttct 146  Q
    ||||||| ||||||||||| || |||||| ||||||  |||  |||||| ||||||||||| |||||||    
T  14488 attaaagagtgaatcaaaatatttttcatacatactcaattagatataagtaagtgaatttcttcttct 14420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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