View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5654_1D_low_71 (Length: 208)

Name: NF5654_1D_low_71
Description: NF5654_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5654_1D_low_71
NF5654_1D_low_71
[»] chr4 (36 HSPs)
chr4 (2-161)||(25091577-25091736)
chr4 (2-158)||(53630446-53630602)
chr4 (2-161)||(10356405-10356564)
chr4 (2-151)||(16998449-16998598)
chr4 (2-152)||(11425867-11426017)
chr4 (2-157)||(19610248-19610403)
chr4 (2-161)||(42875721-42875880)
chr4 (2-130)||(15115146-15115274)
chr4 (2-130)||(37019594-37019722)
chr4 (2-126)||(6633541-6633665)
chr4 (2-126)||(46001535-46001659)
chr4 (10-130)||(9924085-9924206)
chr4 (78-161)||(10694214-10694297)
chr4 (78-161)||(10907980-10908063)
chr4 (17-130)||(19434559-19434672)
chr4 (12-130)||(11478653-11478772)
chr4 (13-130)||(14549695-14549812)
chr4 (78-161)||(12424259-12424342)
chr4 (8-130)||(9870444-9870568)
chr4 (100-161)||(40230328-40230389)
chr4 (58-130)||(15613070-15613142)
chr4 (78-161)||(25513851-25513934)
chr4 (78-143)||(2424374-2424439)
chr4 (100-161)||(19022366-19022427)
chr4 (2-43)||(26921708-26921749)
chr4 (27-130)||(21144-21248)
chr4 (58-130)||(51993541-51993613)
chr4 (78-157)||(9639010-9639089)
chr4 (78-161)||(33186903-33186986)
chr4 (78-131)||(35811375-35811428)
chr4 (8-41)||(9638939-9638972)
chr4 (29-81)||(18238875-18238928)
chr4 (74-130)||(14186955-14187010)
chr4 (78-130)||(15008963-15009015)
chr4 (29-72)||(15117624-15117668)
chr4 (29-72)||(44616137-44616181)
[»] chr2 (50 HSPs)
chr2 (2-158)||(9975853-9976009)
chr2 (2-161)||(5031098-5031257)
chr2 (2-161)||(24780809-24780968)
chr2 (2-157)||(22251421-22251576)
chr2 (2-161)||(24436572-24436731)
chr2 (2-143)||(17307410-17307551)
chr2 (2-130)||(24516110-24516238)
chr2 (2-130)||(40912244-40912372)
chr2 (2-161)||(2523716-2523875)
chr2 (2-143)||(19201187-19201328)
chr2 (2-126)||(37270623-37270747)
chr2 (8-130)||(25142133-25142256)
chr2 (2-93)||(27484514-27484605)
chr2 (6-130)||(357809-357933)
chr2 (8-130)||(3539766-3539889)
chr2 (6-157)||(22501897-22502050)
chr2 (6-157)||(22509831-22509984)
chr2 (6-128)||(1383545-1383667)
chr2 (16-161)||(27852605-27852747)
chr2 (2-82)||(36841188-36841268)
chr2 (111-161)||(14179697-14179747)
chr2 (119-161)||(36841268-36841310)
chr2 (101-161)||(21369316-21369376)
chr2 (82-157)||(149474-149549)
chr2 (119-161)||(20916348-20916390)
chr2 (58-130)||(25046097-25046170)
chr2 (30-130)||(44072509-44072609)
chr2 (27-130)||(5986125-5986229)
chr2 (7-43)||(24884399-24884435)
chr2 (29-80)||(39683162-39683214)
chr2 (13-130)||(22259974-22260090)
chr2 (119-161)||(31521210-31521252)
chr2 (111-160)||(14183436-14183485)
chr2 (8-80)||(19358820-19358893)
chr2 (29-81)||(26506225-26506278)
chr2 (29-81)||(26508703-26508756)
chr2 (29-81)||(27920027-27920080)
chr2 (29-72)||(572244-572288)
chr2 (29-72)||(18809789-18809833)
chr2 (78-130)||(21080969-21081021)
chr2 (29-72)||(22690585-22690629)
chr2 (29-72)||(22695181-22695225)
chr2 (29-72)||(23711285-23711329)
chr2 (29-72)||(24897467-24897511)
chr2 (29-72)||(24899950-24899994)
chr2 (29-72)||(24902427-24902471)
chr2 (29-72)||(24904904-24904948)
chr2 (29-72)||(24907379-24907423)
chr2 (29-72)||(28577951-28577995)
chr2 (29-72)||(32038769-32038813)
[»] chr7 (58 HSPs)
chr7 (2-161)||(12465229-12465388)
chr7 (1-161)||(13147441-13147601)
chr7 (2-161)||(8851128-8851287)
chr7 (2-161)||(12372198-12372357)
chr7 (2-161)||(12322899-12323058)
chr7 (2-161)||(32433558-32433717)
chr7 (2-161)||(11067392-11067551)
chr7 (4-161)||(12127132-12127289)
chr7 (2-131)||(20620210-20620339)
chr7 (2-157)||(16999357-16999515)
chr7 (2-161)||(46386061-46386216)
chr7 (2-135)||(20214071-20214204)
chr7 (2-130)||(14180398-14180526)
chr7 (2-126)||(10277251-10277375)
chr7 (2-130)||(20586276-20586404)
chr7 (2-130)||(24269947-24270075)
chr7 (6-161)||(47974789-47974944)
chr7 (8-130)||(48807325-48807448)
chr7 (68-161)||(44374833-44374926)
chr7 (68-161)||(44383698-44383791)
chr7 (6-136)||(33002089-33002211)
chr7 (8-130)||(15095637-15095759)
chr7 (78-161)||(43276713-43276796)
chr7 (8-130)||(8135238-8135359)
chr7 (18-130)||(14218895-14219008)
chr7 (2-131)||(25943042-25943171)
chr7 (18-130)||(35771441-35771554)
chr7 (30-130)||(16078281-16078382)
chr7 (8-88)||(13132363-13132443)
chr7 (78-158)||(19195611-19195691)
chr7 (8-130)||(13698638-13698761)
chr7 (8-130)||(15140143-15140265)
chr7 (84-158)||(18074619-18074693)
chr7 (18-130)||(4071759-4071872)
chr7 (78-143)||(4690650-4690715)
chr7 (60-133)||(13744655-13744728)
chr7 (9-130)||(15623950-15624070)
chr7 (101-157)||(19283079-19283135)
chr7 (111-161)||(14160825-14160875)
chr7 (10-90)||(41284963-41285043)
chr7 (78-161)||(12754582-12754664)
chr7 (78-161)||(32160169-32160252)
chr7 (100-158)||(58385-58443)
chr7 (58-130)||(10658851-10658923)
chr7 (100-141)||(8930754-8930795)
chr7 (26-130)||(15289052-15289157)
chr7 (29-72)||(457169-457213)
chr7 (29-72)||(13870192-13870236)
chr7 (29-72)||(15375985-15376029)
chr7 (29-72)||(16233368-16233412)
chr7 (29-72)||(16460093-16460137)
chr7 (29-72)||(18628412-18628456)
chr7 (29-72)||(20384395-20384439)
chr7 (78-130)||(29052182-29052234)
chr7 (29-72)||(32126337-32126381)
chr7 (59-135)||(36704566-36704642)
chr7 (29-72)||(41523766-41523810)
chr7 (29-72)||(41526228-41526272)
[»] chr6 (37 HSPs)
chr6 (2-161)||(7827896-7828055)
chr6 (2-161)||(23150256-23150415)
chr6 (2-161)||(19655200-19655359)
chr6 (2-161)||(27125446-27125605)
chr6 (13-158)||(18703503-18703648)
chr6 (13-158)||(18709438-18709583)
chr6 (2-130)||(15890712-15890840)
chr6 (2-130)||(27329981-27330109)
chr6 (2-130)||(27390721-27390849)
chr6 (30-129)||(24267801-24267900)
chr6 (12-130)||(18928614-18928733)
chr6 (6-127)||(18585733-18585854)
chr6 (1-130)||(19235047-19235175)
chr6 (6-130)||(28948502-28948627)
chr6 (12-131)||(19401028-19401147)
chr6 (112-161)||(17318135-17318184)
chr6 (78-161)||(20410481-20410564)
chr6 (64-131)||(27572121-27572188)
chr6 (64-130)||(30673402-30673468)
chr6 (69-130)||(15998880-15998941)
chr6 (8-130)||(23501601-23501724)
chr6 (58-130)||(24550168-24550240)
chr6 (2-41)||(19167926-19167965)
chr6 (26-130)||(31731904-31732009)
chr6 (78-130)||(12041620-12041672)
chr6 (29-80)||(26923709-26923761)
chr6 (60-130)||(19167853-19167923)
chr6 (111-157)||(23431420-23431466)
chr6 (111-161)||(25922034-25922084)
chr6 (100-161)||(19825455-19825516)
chr6 (29-72)||(1540183-1540227)
chr6 (29-80)||(2290442-2290494)
chr6 (29-72)||(18333864-18333908)
chr6 (29-72)||(18343037-18343081)
chr6 (29-72)||(22783074-22783118)
chr6 (29-72)||(24423393-24423437)
chr6 (29-72)||(33865124-33865168)
[»] scaffold0737 (1 HSPs)
scaffold0737 (2-161)||(4683-4842)
[»] chr3 (51 HSPs)
chr3 (2-157)||(17044890-17045045)
chr3 (2-161)||(22306552-22306711)
chr3 (2-157)||(17047050-17047205)
chr3 (1-161)||(11259354-11259514)
chr3 (2-157)||(49900654-49900809)
chr3 (2-161)||(41172340-41172499)
chr3 (2-157)||(17518846-17519001)
chr3 (2-157)||(17533708-17533863)
chr3 (2-130)||(40807920-40808048)
chr3 (7-157)||(14508775-14508926)
chr3 (2-157)||(17539030-17539185)
chr3 (2-161)||(17693991-17694150)
chr3 (6-161)||(35354530-35354685)
chr3 (2-158)||(40812757-40812909)
chr3 (2-130)||(44274342-44274470)
chr3 (2-130)||(10563632-10563760)
chr3 (2-115)||(50348041-50348154)
chr3 (2-126)||(10311451-10311575)
chr3 (67-161)||(17541423-17541517)
chr3 (13-157)||(15931481-15931624)
chr3 (8-143)||(11563654-11563790)
chr3 (13-105)||(35064566-35064658)
chr3 (6-130)||(9510916-9511040)
chr3 (6-130)||(9518891-9519015)
chr3 (10-130)||(19568208-19568328)
chr3 (10-130)||(33565018-33565139)
chr3 (8-130)||(42323971-42324094)
chr3 (10-130)||(35960928-35961049)
chr3 (26-130)||(16050875-16050979)
chr3 (78-157)||(15566744-15566823)
chr3 (8-131)||(49968858-49968981)
chr3 (18-130)||(13185834-13185947)
chr3 (8-161)||(45530572-45530725)
chr3 (8-108)||(37038978-37039080)
chr3 (119-161)||(50347604-50347646)
chr3 (78-130)||(15446868-15446920)
chr3 (26-130)||(24177736-24177840)
chr3 (58-130)||(12509350-12509422)
chr3 (62-130)||(36528851-36528919)
chr3 (29-127)||(11885560-11885658)
chr3 (119-157)||(6159446-6159484)
chr3 (111-153)||(50350793-50350835)
chr3 (111-157)||(53646032-53646078)
chr3 (29-81)||(1864416-1864469)
chr3 (89-130)||(5200243-5200284)
chr3 (100-161)||(14641517-14641578)
chr3 (29-72)||(6468406-6468450)
chr3 (29-72)||(17464024-17464068)
chr3 (29-72)||(34160172-34160216)
chr3 (29-72)||(45577713-45577757)
chr3 (29-72)||(55477338-55477382)
[»] chr1 (36 HSPs)
chr1 (2-161)||(19676635-19676794)
chr1 (2-159)||(21046020-21046177)
chr1 (2-161)||(20633600-20633762)
chr1 (2-157)||(16058287-16058441)
chr1 (2-130)||(42912973-42913101)
chr1 (6-130)||(7051922-7052046)
chr1 (6-130)||(24723351-24723475)
chr1 (26-130)||(13302849-13302954)
chr1 (6-130)||(51324432-51324556)
chr1 (8-130)||(7320594-7320716)
chr1 (78-161)||(28476703-28476786)
chr1 (22-130)||(21168877-21168985)
chr1 (111-161)||(41225423-41225473)
chr1 (111-161)||(41226676-41226726)
chr1 (100-161)||(20588660-20588721)
chr1 (100-161)||(20593198-20593259)
chr1 (8-161)||(22350646-22350795)
chr1 (27-130)||(42697732-42697836)
chr1 (78-130)||(51336479-51336531)
chr1 (6-43)||(44822108-44822145)
chr1 (60-133)||(45499374-45499446)
chr1 (78-130)||(12327743-12327795)
chr1 (78-130)||(21239049-21239101)
chr1 (40-130)||(4595853-4595944)
chr1 (78-161)||(12710867-12710950)
chr1 (8-41)||(8276079-8276112)
chr1 (100-161)||(8306628-8306689)
chr1 (8-41)||(38056762-38056795)
chr1 (29-72)||(13989712-13989756)
chr1 (29-72)||(14237713-14237757)
chr1 (29-72)||(21474356-21474400)
chr1 (29-72)||(23593002-23593046)
chr1 (78-130)||(29763632-29763684)
chr1 (29-72)||(41373320-41373364)
chr1 (78-130)||(46197745-46197797)
chr1 (29-72)||(51083124-51083168)
[»] scaffold1283 (1 HSPs)
scaffold1283 (2-158)||(440-596)
[»] scaffold0001 (3 HSPs)
scaffold0001 (2-161)||(31918-32077)
scaffold0001 (2-161)||(37225-37384)
scaffold0001 (2-157)||(77611-77766)
[»] scaffold1633 (1 HSPs)
scaffold1633 (2-160)||(1129-1287)
[»] scaffold0077 (2 HSPs)
scaffold0077 (2-160)||(34263-34421)
scaffold0077 (58-130)||(5930-6002)
[»] chr8 (47 HSPs)
chr8 (1-161)||(42817876-42818036)
chr8 (2-161)||(19140689-19140847)
chr8 (2-155)||(39935982-39936138)
chr8 (2-130)||(20083638-20083766)
chr8 (2-143)||(5761458-5761598)
chr8 (2-117)||(5082225-5082340)
chr8 (2-130)||(6101753-6101881)
chr8 (2-126)||(6573060-6573184)
chr8 (2-126)||(37292629-37292753)
chr8 (2-126)||(6202700-6202824)
chr8 (78-161)||(18761448-18761531)
chr8 (60-130)||(20397510-20397580)
chr8 (6-130)||(22532132-22532256)
chr8 (6-130)||(22536817-22536941)
chr8 (8-143)||(20022027-20022155)
chr8 (8-130)||(31722493-31722616)
chr8 (8-130)||(45469219-45469342)
chr8 (18-130)||(36727038-36727151)
chr8 (78-143)||(4380604-4380669)
chr8 (26-130)||(17906849-17906953)
chr8 (8-130)||(22317911-22318033)
chr8 (7-109)||(39694298-39694400)
chr8 (2-77)||(20178581-20178658)
chr8 (90-161)||(23943795-23943866)
chr8 (119-161)||(21579175-21579217)
chr8 (83-161)||(22258275-22258353)
chr8 (119-161)||(29762837-29762879)
chr8 (100-161)||(36306019-36306080)
chr8 (100-159)||(18834444-18834503)
chr8 (78-161)||(22208269-22208352)
chr8 (111-161)||(12037133-12037183)
chr8 (82-143)||(21514695-21514756)
chr8 (18-130)||(23899987-23900100)
chr8 (8-80)||(42265559-42265631)
chr8 (63-130)||(22583660-22583727)
chr8 (63-130)||(23889784-23889851)
chr8 (60-131)||(36305837-36305908)
chr8 (80-130)||(23419443-23419493)
chr8 (29-72)||(1485248-1485292)
chr8 (29-72)||(4484126-4484170)
chr8 (29-72)||(14408716-14408760)
chr8 (29-72)||(14824622-14824666)
chr8 (82-130)||(19700165-19700213)
chr8 (2-41)||(20397590-20397630)
chr8 (78-130)||(22254766-22254818)
chr8 (27-130)||(23948211-23948315)
chr8 (78-130)||(26454708-26454760)
[»] scaffold0080 (1 HSPs)
scaffold0080 (2-161)||(21762-21921)
[»] scaffold0064 (1 HSPs)
scaffold0064 (2-161)||(58670-58829)
[»] scaffold0036 (1 HSPs)
scaffold0036 (17-161)||(78154-78298)
[»] scaffold0407 (1 HSPs)
scaffold0407 (2-153)||(11251-11402)
[»] scaffold0111 (2 HSPs)
scaffold0111 (2-157)||(12506-12661)
scaffold0111 (2-127)||(5307-5432)
[»] scaffold0019 (2 HSPs)
scaffold0019 (26-161)||(24100-24235)
scaffold0019 (29-72)||(158631-158675)
[»] chr5 (26 HSPs)
chr5 (2-157)||(21300017-21300172)
chr5 (2-126)||(7484926-7485050)
chr5 (2-161)||(19921562-19921727)
chr5 (2-130)||(20566478-20566598)
chr5 (2-139)||(31622049-31622178)
chr5 (6-135)||(36508628-36508757)
chr5 (78-161)||(23199176-23199259)
chr5 (12-130)||(21617928-21618047)
chr5 (6-130)||(31456888-31457012)
chr5 (12-131)||(22111762-22111881)
chr5 (100-161)||(21398613-21398674)
chr5 (78-130)||(6551290-6551342)
chr5 (10-90)||(31251931-31252011)
chr5 (6-49)||(30138055-30138098)
chr5 (22-130)||(10774664-10774771)
chr5 (26-130)||(20469176-20469281)
chr5 (7-43)||(17876132-17876168)
chr5 (78-131)||(266038-266091)
chr5 (8-80)||(21405678-21405751)
chr5 (78-127)||(30616614-30616663)
chr5 (100-161)||(32607285-32607346)
chr5 (58-130)||(10954069-10954141)
chr5 (78-130)||(17011728-17011780)
chr5 (47-130)||(25249828-25249912)
chr5 (47-130)||(25313612-25313696)
chr5 (29-72)||(39245982-39246026)
[»] scaffold1941 (1 HSPs)
scaffold1941 (2-130)||(62-190)
[»] scaffold0241 (2 HSPs)
scaffold0241 (2-130)||(3106-3234)
scaffold0241 (2-72)||(2488-2558)
[»] scaffold0207 (1 HSPs)
scaffold0207 (2-130)||(13392-13520)
[»] scaffold0020 (2 HSPs)
scaffold0020 (2-134)||(143535-143667)
scaffold0020 (2-130)||(168999-169127)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-161)||(78987-79132)
[»] scaffold1766 (1 HSPs)
scaffold1766 (2-130)||(696-824)
[»] scaffold0149 (2 HSPs)
scaffold0149 (2-130)||(29573-29701)
scaffold0149 (6-130)||(21539-21663)
[»] scaffold0026 (1 HSPs)
scaffold0026 (2-130)||(146647-146775)
[»] scaffold0004 (4 HSPs)
scaffold0004 (2-143)||(328275-328418)
scaffold0004 (24-131)||(75732-75839)
scaffold0004 (2-93)||(72868-72951)
scaffold0004 (26-131)||(110121-110227)
[»] scaffold0113 (1 HSPs)
scaffold0113 (4-130)||(35418-35542)
[»] scaffold0334 (1 HSPs)
scaffold0334 (2-130)||(442-570)
[»] scaffold0632 (1 HSPs)
scaffold0632 (2-130)||(1089-1217)
[»] scaffold0956 (1 HSPs)
scaffold0956 (49-161)||(2526-2638)
[»] scaffold0156 (1 HSPs)
scaffold0156 (6-124)||(16532-16650)
[»] scaffold0802 (1 HSPs)
scaffold0802 (10-130)||(4709-4830)
[»] scaffold0230 (1 HSPs)
scaffold0230 (6-127)||(6688-6809)
[»] scaffold0285 (1 HSPs)
scaffold0285 (2-130)||(19685-19805)
[»] scaffold0213 (1 HSPs)
scaffold0213 (78-161)||(19207-19290)
[»] scaffold0203 (1 HSPs)
scaffold0203 (78-157)||(17913-17992)
[»] scaffold0037 (3 HSPs)
scaffold0037 (6-130)||(112966-113092)
scaffold0037 (12-131)||(81501-81620)
scaffold0037 (6-130)||(117807-117925)
[»] scaffold0628 (1 HSPs)
scaffold0628 (8-143)||(1045-1181)
[»] scaffold0083 (2 HSPs)
scaffold0083 (6-130)||(10755-10877)
scaffold0083 (78-130)||(5045-5097)
[»] scaffold0040 (1 HSPs)
scaffold0040 (6-130)||(106051-106175)
[»] scaffold0032 (1 HSPs)
scaffold0032 (78-157)||(61821-61900)
[»] scaffold0174 (6 HSPs)
scaffold0174 (1-131)||(19629-19759)
scaffold0174 (2-126)||(5194-5310)
scaffold0174 (2-126)||(11314-11430)
scaffold0174 (78-161)||(5454-5537)
scaffold0174 (100-161)||(19878-19939)
scaffold0174 (101-161)||(11639-11699)
[»] scaffold0379 (2 HSPs)
scaffold0379 (13-131)||(10741-10851)
scaffold0379 (100-161)||(10969-11030)
[»] scaffold0431 (1 HSPs)
scaffold0431 (78-161)||(5633-5716)
[»] scaffold0112 (1 HSPs)
scaffold0112 (60-130)||(2871-2941)
[»] scaffold0008 (1 HSPs)
scaffold0008 (9-130)||(135504-135625)
[»] scaffold1256 (1 HSPs)
scaffold1256 (78-143)||(2187-2252)
[»] scaffold0175 (1 HSPs)
scaffold0175 (8-130)||(8571-8694)
[»] scaffold0123 (1 HSPs)
scaffold0123 (8-130)||(7205-7329)
[»] scaffold0010 (1 HSPs)
scaffold0010 (27-130)||(126305-126407)
[»] scaffold0028 (6 HSPs)
scaffold0028 (8-129)||(3053-3174)
scaffold0028 (29-72)||(135059-135103)
scaffold0028 (29-72)||(137528-137572)
scaffold0028 (29-72)||(139997-140041)
scaffold0028 (29-72)||(142466-142510)
scaffold0028 (29-72)||(144935-144979)
[»] scaffold0056 (1 HSPs)
scaffold0056 (18-130)||(67060-67173)
[»] scaffold0848 (1 HSPs)
scaffold0848 (8-80)||(2071-2143)
[»] scaffold0853 (1 HSPs)
scaffold0853 (78-161)||(2423-2506)
[»] scaffold0256 (1 HSPs)
scaffold0256 (60-122)||(1855-1917)
[»] scaffold0251 (1 HSPs)
scaffold0251 (13-130)||(20086-20202)
[»] scaffold0107 (1 HSPs)
scaffold0107 (111-157)||(13525-13571)
[»] scaffold0516 (1 HSPs)
scaffold0516 (82-143)||(5292-5353)
[»] scaffold0328 (2 HSPs)
scaffold0328 (100-157)||(18613-18670)
scaffold0328 (8-41)||(18731-18764)
[»] scaffold0162 (1 HSPs)
scaffold0162 (100-161)||(23861-23922)
[»] scaffold0041 (1 HSPs)
scaffold0041 (76-125)||(5712-5761)
[»] scaffold0439 (1 HSPs)
scaffold0439 (7-86)||(12323-12403)
[»] scaffold0075 (1 HSPs)
scaffold0075 (27-130)||(60843-60947)
[»] scaffold0071 (1 HSPs)
scaffold0071 (78-130)||(15272-15324)
[»] scaffold0577 (1 HSPs)
scaffold0577 (22-88)||(9004-9070)
[»] scaffold0819 (1 HSPs)
scaffold0819 (22-130)||(5311-5418)
[»] scaffold0261 (1 HSPs)
scaffold0261 (2-43)||(6620-6661)
[»] scaffold0100 (1 HSPs)
scaffold0100 (2-126)||(26638-26756)
[»] scaffold0859 (1 HSPs)
scaffold0859 (8-92)||(4612-4696)
[»] scaffold0220 (2 HSPs)
scaffold0220 (78-130)||(19954-20006)
scaffold0220 (8-41)||(13878-13911)
[»] scaffold0676 (1 HSPs)
scaffold0676 (78-157)||(2881-2960)
[»] scaffold0338 (1 HSPs)
scaffold0338 (6-49)||(165-208)
[»] scaffold0671 (1 HSPs)
scaffold0671 (80-130)||(4942-4992)
[»] scaffold0125 (1 HSPs)
scaffold0125 (111-161)||(28584-28634)
[»] scaffold0070 (1 HSPs)
scaffold0070 (119-157)||(11194-11232)
[»] scaffold0007 (1 HSPs)
scaffold0007 (3-64)||(158888-158949)
[»] scaffold0002 (1 HSPs)
scaffold0002 (58-130)||(398541-398614)
[»] scaffold0601 (1 HSPs)
scaffold0601 (95-131)||(195-231)
[»] scaffold0589 (1 HSPs)
scaffold0589 (27-130)||(4333-4437)
[»] scaffold0515 (1 HSPs)
scaffold0515 (78-130)||(5029-5081)
[»] scaffold0436 (1 HSPs)
scaffold0436 (78-130)||(8960-9012)
[»] scaffold0414 (1 HSPs)
scaffold0414 (100-160)||(11130-11190)
[»] scaffold0306 (1 HSPs)
scaffold0306 (78-130)||(5029-5081)
[»] scaffold0254 (1 HSPs)
scaffold0254 (29-72)||(19119-19163)
[»] scaffold0138 (2 HSPs)
scaffold0138 (78-130)||(21097-21149)
scaffold0138 (78-130)||(34112-34164)
[»] scaffold0134 (1 HSPs)
scaffold0134 (29-72)||(38668-38712)
[»] scaffold0057 (1 HSPs)
scaffold0057 (78-130)||(69853-69905)
[»] scaffold0042 (1 HSPs)
scaffold0042 (78-130)||(29388-29440)
[»] scaffold0031 (1 HSPs)
scaffold0031 (29-72)||(56278-56322)
[»] scaffold0023 (1 HSPs)
scaffold0023 (29-72)||(95257-95301)


Alignment Details
Target: chr4 (Bit Score: 132; Significance: 9e-69; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 25091577 - 25091736
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  25091577 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 25091676  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25091677 tagagaaagttagtcccacccttaccttaaattagatgatcgaactctacaagattgctc 25091736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 53630602 - 53630446
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  53630602 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 53630503  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattg 158  Q
    |||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||    
T  53630502 tagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattg 53630446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 10356564 - 10356405
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||| |||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  10356564 tattaactaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 10356465  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| | ||||||||||||||| | |||||||||||||||||||||||    
T  10356464 tagagaaagttagtcccaaccttaccttaaattaaaagatcgaactctacaagattgctc 10356405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 16998449 - 16998598
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||||||||||||||||||||||||| |||||||||| |||||||    
T  16998449 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcataattatacaacttagaat 16998548  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctac 151  Q
    |||||||| ||||||  || |||||||||||||||||||||| |||||||    
T  16998549 tagagaaagttagtctcactcttaccttaaattagatgatcggactctac 16998598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 11425867 - 11426017
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  11425867 tattaacaaccaattacaatttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 11425966  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctaca 152  Q
    |||||||| ||||||| |||||||||||||||  ||||||||  |||||||    
T  11425967 tagagaaagttagtcccacccttaccttaaatatgatgatcggtctctaca 11426017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 19610248 - 19610403
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||| ||||||| |||||| |||||||| | ||||| || |||||||||||||||||||||||||||||||||||| ||| |||    
T  19610248 tattaacaaccaattacaacgtcaaaacttaattctcaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttaaaat 19610347  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||| ||||||  ||||||||||||||||||||||||| | |||||||||||    
T  19610348 tagagaaagttagtctcacccttaccttaaattagatgatcggattctacaagatt 19610403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 42875721 - 42875880
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||| ||||||||||||||||||||| |||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  42875721 tattaacaatcaattacaacttcaaaacctatttcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 42875820  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    || | ||| ||||||| |||||||||||||||||||| |||  ||||||||| |||||||    
T  42875821 tatataaagttagtcccacccttaccttaaattagataatcagactctacaaaattgctc 42875880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 15115146 - 15115274
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||  ||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  15115146 tattaacaaccaattacaacttcaaaaaataattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 15115245  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||| ||||||||||||    
T  15115246 tagagaaagttagtcccacccttacctta 15115274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 37019594 - 37019722
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | ||||| || |||||||||| ||||||||||||||||||||||||| ||| |||    
T  37019594 tattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaacatgttaaactcaatttcagaattatacaacttaaaat 37019693  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||  ||||||||||||    
T  37019694 tagagaaagttagtcacacccttacctta 37019722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 6633665 - 6633541
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||  | ||||| || ||||||||||||||||| ||||||||||||||||||  ||||||    
T  6633665 tattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgctaaacttaatttcagaattatacaacgtagaat 6633566  T
Q  102 tagagaaatttagtccaacccttac 126  Q
    |||||||| ||||||| ||||||||    
T  6633565 tagagaaagttagtcccacccttac 6633541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 46001659 - 46001535
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||  | ||||| || ||||||||||||||||| ||||||||||||||||||  ||||||    
T  46001659 tattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgctaaacttaatttcagaattatacaacgtagaat 46001560  T
Q  102 tagagaaatttagtccaacccttac 126  Q
    |||||||| ||||||  ||||||||    
T  46001559 tagagaaagttagtctcacccttac 46001535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 9924085 - 9924206
Alignment:
Q  10 accaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagagaa 108  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||  || ||||||| || |||| |||| |||||||||||||| | ||||||||||||||    
T  9924085 accaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaa 9924184  T
Q  109 atttagtccaacccttacctta 130  Q
    | ||||||  ||||||||||||    
T  9924185 agttagtctcacccttacctta 9924206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 10694297 - 10694214
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||| |  | ||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  10694297 tttcagaattaaattacttagaattagagaaatttagtctcacccttaccttaaattagatgatcggactctacaagattgctc 10694214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 10908063 - 10907980
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||| |  | ||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  10908063 tttcagaattaaattacttagaattagagaaatttagtctcacccttaccttaaattagatgatcggactctacaagattgctc 10907980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 19434672 - 19434559
Alignment:
Q  17 acaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtc 116  Q
    |||||||| |||| ||||||||||||| ||||||||| || |||| || || ||||  || ||||||||| |||||| ||||||||||||||| ||||||    
T  19434672 acaacttctaaacttaattcccaaatttcaaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtc 19434573  T
Q  117 caacccttacctta 130  Q
    | ||||||||||||    
T  19434572 ccacccttacctta 19434559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 11478772 - 11478653
Alignment:
Q  12 caattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaat 110  Q
    ||||||||| ||| |||||||||| ||||||||| ||||||  |||||||||| || |||| ||||||| ||||||||||| | |||||||||||| ||     
T  11478772 caattacaagttctaaacctaatttccaaattcccaaaacttcaatctacaacttgttaaattcaattttcagaattataccacttagaattagaggaag 11478673  T
Q  111 ttagtccaacccttacctta 130  Q
    ||||||  ||||||||||||    
T  11478672 ttagtctcacccttacctta 11478653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 14549695 - 14549812
Alignment:
Q  13 aattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaattt 112  Q
    |||||||||||| |||||||||||||||||| | ||||||| || |||| || || ||||  || ||||||||  |||||| ||||||||||||||| ||    
T  14549695 aattacaacttctaaacctaattcccaaatttccaaaactacaacctaccacctgttaaatccagtttcagaaacatacaacttagaattagagaaagtt 14549794  T
Q  113 agtccaacccttacctta 130  Q
    ||||  ||||||||||||    
T  14549795 agtctcacccttacctta 14549812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 12424342 - 12424259
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||   |  ||||||||||  |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  12424342 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgatcggactctacaagattgctc 12424259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 9870568 - 9870444
Alignment:
Q  8 caaccaattacaacttcaaaacctaatt-cccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattaga 105  Q
    ||||||||||||||||| || ||||||| |||||||||| ||||||| || ||||| ||||  |||  |||||| ||||||||||||| |||||||||      
T  9870568 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctacatcatgtcaaatccaattttcagaattatacaacttagaattatg 9870469  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||| ||||||| ||||||| ||||    
T  9870468 gaaagttagtcccacccttagctta 9870444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 40230328 - 40230389
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||| ||||| ||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  40230328 attaaagaaagttagtcccacccttaccttagattagatgattgaactctacaagattgctc 40230389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 15613070 - 15613142
Alignment:
Q  58 ctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||| ||||  ||||||||||||||||||| ||||||||| ||||  ||||||| ||||||||||||    
T  15613070 ctacaacatgttaaatccaatttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 15613142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 25513851 - 25513934
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||||||||||| | |  ||||||||||  |||||| ||| |||||||| |||||||||||  |||||||||||||||||    
T  25513851 tttcagaattatacaactcattattagagaaagctagtcccaccattaccttagattagatgatcagactctacaagattgctc 25513934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 2424439 - 2424374
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcg 143  Q
    ||||| |||||||||| ||||||||||||||| ||||||  ||||||||||||  |||||||||||    
T  2424439 tttcaaaattatacaacttagaattagagaaagttagtctcacccttaccttaggttagatgatcg 2424374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 19022366 - 19022427
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||||| ||||||  ||| |||||||| |||||||||||| |||||||||||||||||    
T  19022366 attagagaaagttagtctcacctttaccttagattagatgatcggactctacaagattgctc 19022427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 26921749 - 26921708
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaatt 43  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  26921749 tattaacaaccaattacgacttcaaaacctaattcccaaatt 26921708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 21144 - 21248
Alignment:
Q  27 aacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatt-tcagaattatacaaattagaattagagaaatttagtccaaccctta 125  Q
    |||||||||| ||||| |  ||||||| || |||||||||| |||| |||||| |||||||||||||| ||||||||| ||||  ||||||  | |||||    
T  21144 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaattcaattctcagaattatacaacttagaattaaagaaggttagtctcatcctta 21243  T
Q  126 cctta 130  Q
    |||||    
T  21244 cctta 21248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 51993541 - 51993613
Alignment:
Q  58 ctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||| ||||  |||||||||||||| |||| ||||||||| ||||  ||||||| ||||||||||||    
T  51993541 ctacaacatgttaaatccaatttcagaattacacaacttagaattaaagaaggttagtcccacccttacctta 51993613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 9639010 - 9639089
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    ||||||||||| |||| | |  ||||||||||  |||||| |||||||||||| ||||||| |||| |||||||||||||    
T  9639010 tttcagaattacacaactcattattagagaaagctagtcccacccttaccttagattagattatcggactctacaagatt 9639089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 33186903 - 33186986
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||   |  ||||||||||  |||||  |||| |||||||||||||||||||| ||||||||| |||||||    
T  33186903 tttcagaattatacaacccattattagagaaagctagtctcacccctaccttaaattagatgatcggactctacaaaattgctc 33186986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 35811428 - 35811375
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaa 131  Q
    ||||| |||||||| | ||||||||||||||| ||||||| |||||||||||||    
T  35811428 tttcaaaattataccacttagaattagagaaagttagtcccacccttaccttaa 35811375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 9638939 - 9638972
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaa 41  Q
    ||||||||||||||||| ||||||||||||||||    
T  9638939 caaccaattacaacttctaaacctaattcccaaa 9638972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 18238928 - 18238875
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaactcaatttc 81  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||  |||||||    
T  18238928 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttc 18238875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 14186955 - 14187010
Alignment:
Q  74 tcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||||| |||||  ||||||||||||||| ||| ||| ||||||||||||    
T  14186955 tcaatttcagaatcatacac-ttagaattagagaaagttactcccacccttacctta 14187010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 15008963 - 15009015
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||| |  | ||||||||||||||| ||||||| ||||||||||||    
T  15008963 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 15009015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 15117668 - 15117624
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  15117668 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 15117624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 44616137 - 44616181
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  44616137 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 44616181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 6e-67; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 9975853 - 9976009
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  9975853 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 9975952  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattg 158  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9975953 tagagaaagttagtccaacccttaccttaaattagatgatcggactctacaagattg 9976009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 5031257 - 5031098
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  5031257 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 5031158  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  5031157 tagagaaagttagtcccacccttaccttaaattagatgattggactctacaagattgctc 5031098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 24780968 - 24780809
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||||  |||||||||||||||||||||||||||||| |||||||    
T  24780968 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacttcatgctaaactcaatttcagaattatacaacttagaat 24780869  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  24780868 tagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctc 24780809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 22251576 - 22251421
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  22251576 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 22251477  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||| |||||   ||||||||||||||||||||||||  |||||||||||||    
T  22251476 tagagaaaattagtttcacccttaccttaaattagatgatcagactctacaagatt 22251421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 24436572 - 24436731
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  24436572 tattaacaactaattacaacttcaaaacctaatttccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 24436671  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    | |||||| ||||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  24436672 tcgagaaagttagtcccacccttatcttaaattagatgatcggactctacaagattgctc 24436731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 17307410 - 17307551
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  17307410 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 17307509  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcg 143  Q
    |||||||| ||||||| |||||||||||| ||||||||||||    
T  17307510 tagagaaagttagtcccacccttaccttagattagatgatcg 17307551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 24516110 - 24516238
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||||| |||||||    
T  24516110 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgttaaactcaatttcagaattatacaacttagaat 24516209  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||| ||||||||||||    
T  24516210 tagagaaagttagtcccacccttacctta 24516238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 40912244 - 40912372
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  40912244 tattaacaaccaactacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 40912343  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||| ||||||||||||    
T  40912344 tagagaaagttagtcccacccttacctta 40912372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 2523875 - 2523716
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||| |||||||||||| || ||||||||||| ||||||||| | || || || |||||||||| |||||||||||| |||||||||||| |||||||    
T  2523875 tattaataaccaattacaatttaaaaacctaatttccaaattcccataaatacaacctacaacatgttaaactcaatttaagaattatacaacttagaat 2523776  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  2523775 tagagaaagttagtcccacccttaccttaaattagatgatcggactttacaagattgctc 2523716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 19201328 - 19201187
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||||| |||||||    
T  19201328 tattaacaaccaattacaacttcaaaacctaattcccaaattcctataactacaacctacaacatgataaactcaatttcagaattatacaacttagaat 19201229  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcg 143  Q
    |||||||| ||||||  ||||||| ||||  |||||||||||    
T  19201228 tagagaaagttagtctcacccttaacttaggttagatgatcg 19201187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 37270623 - 37270747
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||| |||||||||||||||| |||||| |||||||  | ||||| || ||||||||||||||||||||||||||||||||||||  ||||||    
T  37270623 tattaacaacccattacaacttcaaaacttaattctcaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaacgtagaat 37270722  T
Q  102 tagagaaatttagtccaacccttac 126  Q
    |||||||| ||||||| ||||||||    
T  37270723 tagagaaagttagtcccacccttac 37270747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 25142133 - 25142256
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagag 106  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||| || ||||||| || |||| |||| |||||||||||||| | ||||||||||||    
T  25142133 caaccaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagag 25142232  T
Q  107 aaatttagtccaacccttacctta 130  Q
    ||| ||||||| ||||||||||||    
T  25142233 aaagttagtcccacccttacctta 25142256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 27484605 - 27484514
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaa 93  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||||||    
T  27484605 tattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaa 27484514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 357809 - 357933
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| || |||| || || ||||  || ||||||||| |||||| |||||||||||    
T  357809 aacaaccaattacaacttctaaacctaattcccaaatttcaaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 357908  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||| ||||||| ||||||||||||    
T  357909 gaaagttagtcccacccttacctta 357933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 3539766 - 3539889
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactc-aatttcagaattatacaaattagaattagag 106  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| || ||||||| || |||| || | |||||||||||||| | ||| ||||||||    
T  3539766 caaccaattacaacttctaaacctaattctcaaattccaaaaactacaacctacaacttgttaaattcgattttcagaattataccacttaaaattagag 3539865  T
Q  107 aaatttagtccaacccttacctta 130  Q
    ||| ||||||| ||||||||||||    
T  3539866 aaagttagtcccacccttacctta 3539889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 157
Target Start/End: Original strand, 22501897 - 22502050
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaatt-cccaaattccaaaaactaaaatctacaacatgctaaactcaatt-tcagaattatacaaattagaatta 103  Q
    |||||||||| |||||||| || ||||||| |||||||||  ||||||| || | |||||||| ||||  ||||| ||||||||| |  | |||||||||    
T  22501897 aacaaccaatcacaacttctaaccctaatttcccaaattcataaaactacaacccacaacatgttaaatccaattctcagaattaaattacttagaatta 22501996  T
Q  104 gagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||| ||||||| |||||||||||| |||||||||||| |||||||||||||    
T  22501997 gagaaagttagtcccacccttaccttagattagatgatcggactctacaagatt 22502050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 157
Target Start/End: Original strand, 22509831 - 22509984
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaatt-cccaaattccaaaaactaaaatctacaacatgctaaactcaatt-tcagaattatacaaattagaatta 103  Q
    |||||||||| |||||||| || ||||||| |||||||||  ||||||| || | |||||||| ||||  ||||| ||||||||| |  | |||||||||    
T  22509831 aacaaccaatcacaacttctaaccctaatttcccaaattcataaaactacaacccacaacatgttaaatccaattctcagaattaaattacttagaatta 22509930  T
Q  104 gagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||| ||||||| |||||||||||| |||||||||||| |||||||||||||    
T  22509931 gagaaagttagtcccacccttaccttagattagatgatcggactctacaagatt 22509984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 1383667 - 1383545
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||||| || |||| || || ||||  || ||||||||| |||||| |||||||||||    
T  1383667 aacaaccaattacaacttctaaacctaattcccaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatgatacaacttagaattaga 1383568  T
Q  106 gaaatttagtccaacccttacct 128  Q
    |||| ||||||  ||||||||||    
T  1383567 gaaagttagtctcacccttacct 1383545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 27852605 - 27852747
Alignment:
Q  16 tacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttag 114  Q
    ||||||||| ||| |||||||||||||||| ||||| | || ||||||| || |||| ||||||| ||||||||||| | ||||||||||||||| ||||    
T  27852605 tacaacttctaaatctaattcccaaattcccaaaacaacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttag 27852704  T
Q  115 tccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||| |||||||||||| ||    |||||| ||||||||||| |||||    
T  27852705 tcccacccttaccttagat----tgatcggactctacaagaatgctc 27852747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 36841188 - 36841268
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttca 82  Q
    |||||||||||||||||||||||||||||||||| | ||||||| | ||||| || |||||||||| ||||||||||||||    
T  36841188 tattaacaaccaattacaacttcaaaacctaatttctaaattcccataactacaacctacaacatgttaaactcaatttca 36841268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 14179747 - 14179697
Alignment:
Q  111 ttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  14179747 ttagtcccacccttaccttatattagatgatcgaactctacaagattgctc 14179697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 36841268 - 36841310
Alignment:
Q  119 acccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  36841268 acccttaccttaaattagatgatcggactctacaagattgctc 36841310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 21369316 - 21369376
Alignment:
Q  101 ttagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||||  | |||| |||||||||||| |||||||||||| |||||||||||||||||    
T  21369316 ttagagaaagcttgtcccacccttaccttagattagatgatcggactctacaagattgctc 21369376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 149549 - 149474
Alignment:
Q  82 agaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||||||| | |  ||||||||||  |||| | |||||||||||| |||||||||||| |||||||||||||    
T  149549 agaattatacaactcattattagagaaagctagttccacccttaccttagattagatgatcggactctacaagatt 149474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 20916348 - 20916390
Alignment:
Q  119 acccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||||||||||||| ||||||||||||||||    
T  20916348 acccttactttaaattagatgatcgagctctacaagattgctc 20916390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 25046097 - 25046170
Alignment:
Q  58 ctacaacatgctaaactcaatt-tcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||| ||||  ||||| |||||||||||||| ||||||||| ||||  ||||||| ||||||||||||    
T  25046097 ctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 25046170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 130
Target Start/End: Original strand, 44072509 - 44072609
Alignment:
Q  30 ctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaacccttacct 128  Q
    |||||| ||||||||| ||||||| || ||||||| ||||||| ||||||| || ||| |||||  |||||||||| |||| ||||||  ||||||||||    
T  44072509 ctaatttccaaattcccaaaactacaacctacaacttgctaaattcaattttcaaaatcatacac-ttagaattagtgaaagttagtctcacccttacct 44072607  T
Q  129 ta 130  Q
    ||    
T  44072608 ta 44072609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 5986125 - 5986229
Alignment:
Q  27 aacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaaccctta 125  Q
    |||||||||| ||||| |  ||||||| || ||||||| || ||||  |||||| ||||||||||||| ||||||||| ||||  || |||| |||||||    
T  5986125 aacctaattctcaaatcctcaaaactataacctacaacttgttaaatccaattttcagaattatacaacttagaattaaagaaggttcgtcccaccctta 5986224  T
Q  126 cctta 130  Q
    |||||    
T  5986225 cctta 5986229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 24884399 - 24884435
Alignment:
Q  7 acaaccaattacaacttcaaaacctaattcccaaatt 43  Q
    |||||||||||||||||| ||||||||||||||||||    
T  24884399 acaaccaattacaacttctaaacctaattcccaaatt 24884435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 39683162 - 39683214
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaactcaattt 80  Q
    |||||||||||||||| |||||||||||| |||||||||| |||| |||||||    
T  39683162 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaattcaattt 39683214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 22259974 - 22260090
Alignment:
Q  13 aattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagagaaatt 111  Q
    |||||||||||| || |||||||||||||||||  |||||| || ||||||| || |||| |||| ||||||||| || | | |||||||||| |||| |    
T  22259974 aattacaacttctaagcctaattcccaaattcc-taaactacaacctacaacctgttaaattcaattttcagaatcatgc-acttagaattagtgaaagt 22260071  T
Q  112 tagtccaacccttacctta 130  Q
    |||||  || |||||||||    
T  22260072 tagtcacactcttacctta 22260090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 31521210 - 31521252
Alignment:
Q  119 acccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||    
T  31521210 acccttaccctaaattagatgatcggactgtacaagattgctc 31521252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 14183485 - 14183436
Alignment:
Q  111 ttagtccaacccttaccttaaattagatgatcgaactctacaagattgct 160  Q
    ||||||| ||||||||||||||||||||||||| | | || |||||||||    
T  14183485 ttagtcccacccttaccttaaattagatgatcggattttataagattgct 14183436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 19358820 - 19358893
Alignment:
Q  8 caaccaattacaacttcaaaacctaa-ttcccaaattccaaaaactaaaatctacaacatgctaaactcaattt 80  Q
    ||||||||||||||||| || ||||| |||||||||||| ||||||| || | ||||| || |||| |||||||    
T  19358820 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacttgttaaattcaattt 19358893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 26506225 - 26506278
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaactcaatttc 81  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||  |||||||    
T  26506225 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttc 26506278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 26508703 - 26508756
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaactcaatttc 81  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||  |||||||    
T  26508703 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttc 26508756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 27920080 - 27920027
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaactcaatttc 81  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||  |||||||    
T  27920080 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttc 27920027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 572244 - 572288
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  572244 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 572288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 18809789 - 18809833
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  18809789 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 18809833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 21081021 - 21080969
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||| |  | ||||||||||||||| ||||||| ||||||||||||    
T  21081021 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 21080969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 22690585 - 22690629
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  22690585 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 22690629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 22695181 - 22695225
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  22695181 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 22695225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 23711329 - 23711285
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  23711329 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 23711285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 24897511 - 24897467
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  24897511 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 24897467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 24899994 - 24899950
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  24899994 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 24899950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 24902471 - 24902427
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  24902471 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 24902427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 24904948 - 24904904
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  24904948 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 24904904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 24907423 - 24907379
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  24907423 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 24907379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 28577951 - 28577995
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  28577951 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 28577995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 32038813 - 32038769
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  32038813 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 32038769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 2e-66; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 12465388 - 12465229
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  12465388 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 12465289  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  12465288 tagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctc 12465229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 13147601 - 13147441
Alignment:
Q  1 ttattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||| || ||||||    
T  13147601 ttattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatataacttagaa 13147502  T
Q  101 ttagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  13147501 ttagagaaagttagtcccacccttaccttaatttagatgatcggactctacaagattgctc 13147441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 8851287 - 8851128
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||| ||||||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  8851287 tattaacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 8851188  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  8851187 tagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctc 8851128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 12372198 - 12372357
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | ||||| || || ||||||||||||||||||||||||||||||||| |||||||    
T  12372198 tattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctgcaacatgctaaactcaatttcagaattatacaacttagaat 12372297  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  12372298 tagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctc 12372357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 12323058 - 12322899
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||| |||||||||||||||||||||||||||| | | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  12323058 tattaacaaccaagtacaacttcaaaacctaattcccaaatttccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 12322959  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||| | ||||||||||||||||||||||||| |||||||||||||||||    
T  12322958 tagagaaagttagttccacccttaccttaaattagatgatcggactctacaagattgctc 12322899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 32433717 - 32433558
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  32433717 tattaacaaccaattacaacttcaaaacctaattcacaaattcacataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 32433618  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  32433617 tagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattgctc 32433558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 11067392 - 11067551
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||| || ||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  11067392 tattaacaaccaattactacatcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 11067491  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||  ||||||||||||||||||||||||| |||||| ||||||||||    
T  11067492 tagagaaagttagtctcacccttaccttaaattagatgatcggactctataagattgctc 11067551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 12127289 - 12127132
Alignment:
Q  4 ttaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaatta 103  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  12127289 ttaacaaccaattacaacttcaaaacctaattcccaaatttccataactaaaacctacaacatgttaaactcaatttcagaattatacaacttagaatta 12127190  T
Q  104 gagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||| ||||||| |||||||||||| ||||||||||||  |||||| |||||||||    
T  12127189 gagaaagttagtcccacccttaccttagattagatgatcggtctctacgagattgctc 12127132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 20620210 - 20620339
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||| | | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  20620210 tattaacaaccaattacaacttcaaaacctaattcccaaatttccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 20620309  T
Q  102 tagagaaatttagtccaacccttaccttaa 131  Q
    |||||||| ||||||| || ||||||||||    
T  20620310 tagagaaagttagtcccacacttaccttaa 20620339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 16999357 - 16999515
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaa-ttccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaatta--g 98  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| | ||||| ||  || |||||||||||||||||||||||||||||||| |||  |    
T  16999357 tattaacaaccgattacaacttcaaaacctaattcccaaaattcccataactacaacatataacatgctaaactcaatttcagaattatacaacttatag 16999456  T
Q  99 aattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||    
T  16999457 aattagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagatt 16999515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 46386216 - 46386061
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | ||||| || |||||||||  ||||||||||||||||||||||||| |||||||    
T  46386216 tattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaacatattaaactcaatttcagaattatacaacttagaat 46386117  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| ||||||| |||| ||    ||||||||| ||||||||||||||    
T  46386116 tagagaaagttagtcctacccttatcttagat----tgatcgaacactacaagattgctc 46386061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 20214071 - 20214204
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| | |||||    
T  20214071 tattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaactcagaat 20214170  T
Q  102 tagagaaatttagtccaacccttaccttaaatta 135  Q
    | |||||| ||||||| |||||||||||| ||||    
T  20214171 ttgagaaagttagtcccacccttaccttagatta 20214204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 14180526 - 14180398
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | ||||| || |||||| ||||||||||||||||||||||||||||| |||||||    
T  14180526 tattaacaaccaattacaacttcaaaacataattcccaaattcccataactacaacctacaatatgctaaactcaatttcagaattatacaacttagaat 14180427  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||  ||||||||||||    
T  14180426 tagagaaaattagtcacacccttacctta 14180398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 10277251 - 10277375
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||  | ||||| || ||||||||||||||||| ||||||||||||||||||  ||||||    
T  10277251 tattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgctaaacttaatttcagaattatacaacgtagaat 10277350  T
Q  102 tagagaaatttagtccaacccttac 126  Q
    |||||||| ||||||| ||||||||    
T  10277351 tagagaaagttagtcccacccttac 10277375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 20586276 - 20586404
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||| |||||||||| |||| || || |||||| | ||||| || |||||||||| ||||||||||||||||||||||||| |||||||    
T  20586276 tattaacaaccaattgcaacttcaaaccctagtttcctaattcccataactacaacctacaacatggtaaactcaatttcagaattatacaacttagaat 20586375  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||| ||||||||||||    
T  20586376 tagagaaagttagtcccacccttacctta 20586404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 24270075 - 24269947
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||| ||||||||||||||||||||| |||  |||   | || | |||||||||||||||||||||||||||||||||| ||| |||    
T  24270075 tattaacaaccaattacgacttcaaaacctaattcccaacttcacaaattcacaaacaacaacatgctaaactcaatttcagaattatacaacttaaaat 24269976  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||| ||| ||||||||||||    
T  24269975 tagagaaagttaatcccacccttacctta 24269947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 161
Target Start/End: Complemental strand, 47974944 - 47974789
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||| |||| ||||||||||||| | ||||||| || |||| || || ||||  || ||||||||| |||||| |||||||||||    
T  47974944 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 47974845  T
Q  106 gaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||| ||||||  ||||||||||||  |||   ||||||||||||||| |||||||    
T  47974844 gaaagttagtctcacccttaccttaggttaatcgatcgaactctacaatattgctc 47974789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 48807448 - 48807325
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagag 106  Q
    |||||||||||||||||   ||| |||||||||||||| ||||||| |||||||||| || |||| || |||| ||||||||||| | ||||||||||||    
T  48807448 caaccaattacaacttctgtaccaaattcccaaattcccaaaactacaatctacaacttgttaaattcgattttcagaattataccacttagaattagag 48807349  T
Q  107 aaatttagtccaacccttacctta 130  Q
    ||| ||||||| ||||||||||||    
T  48807348 aaagttagtcccacccttacctta 48807325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 68 - 161
Target Start/End: Original strand, 44374833 - 44374926
Alignment:
Q  68 ctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| ||  |||||||||||| ||||||||||||  |||||| |||||||||    
T  44374833 ctaaactcaatttcagaattatacaacttagaattagagaaagttactctcacccttaccttagattagatgatcggtctctacgagattgctc 44374926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 68 - 161
Target Start/End: Original strand, 44383698 - 44383791
Alignment:
Q  68 ctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| ||  |||||||||||| ||||||||||||  |||||| |||||||||    
T  44383698 ctaaactcaatttcagaattatacaacttagaattagagaaagttactctcacccttaccttagattagatgatcggtctctacgagattgctc 44383791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 33002089 - 33002211
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||| || ||||||||||||||||| |||        ||||||| || ||||  |||||||||||| |||||| |||||||||||    
T  33002089 aacaaccaattacaacttctaaccctaattcccaaattcccaaa--------ctacaacctgttaaatccaatttcagaatcatacaacttagaattaga 33002180  T
Q  106 gaaatttagtccaacccttaccttaaattag 136  Q
    |||| ||||||| ||||||||||||| ||||    
T  33002181 gaaagttagtccgacccttaccttaagttag 33002211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 15095759 - 15095637
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagag 106  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||| || ||||||| || |||| |||| ||||||||| |||| | |||||||||| |    
T  15095759 caactaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtg 15095661  T
Q  107 aaatttagtccaacccttacctta 130  Q
    ||  ||||||| ||||||||||||    
T  15095660 aaggttagtcccacccttacctta 15095637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 43276796 - 43276713
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||   |  |||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  43276796 tttcagaattatacaacccattattagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctc 43276713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 8135359 - 8135238
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagaga 107  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||||| || ||||||| || |||| ||||||||||||| |||| | |||| ||||| ||    
T  8135359 caaccaattacaacttctaaacctaattctcaaattcctaaaactacaacctacaacctgttaaattcaatttcagaatcatac-acttaggattagtga 8135261  T
Q  108 aatttagtccaacccttacctta 130  Q
    |  ||||||  ||||||||||||    
T  8135260 aggttagtctcacccttacctta 8135238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 14219008 - 14218895
Alignment:
Q  18 caacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtc 116  Q
    ||||||| |||||||||||| ||||||  ||||||| || ||||||| || |||| ||||||| ||||||||||| | ||||||||||||||| ||||||    
T  14219008 caacttctaaacctaattccaaaattctcaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtc 14218909  T
Q  117 caacccttacctta 130  Q
      ||||||||||||    
T  14218908 tcacccttacctta 14218895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 25943042 - 25943171
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||| |||||||||||||||| ||||||||  |||   | || | ||||||||||||| ||||||||||||||||||||   | |||    
T  25943042 tattaacaaccaattacgacttcaaaacctaatttccaaattcacaaattcacaaacaacaacatgctaaattcaatttcagaattatacaacccaaaat 25943141  T
Q  102 tagagaaatttagtccaacccttaccttaa 131  Q
    |||||||| ||| ||| ||| |||| ||||    
T  25943142 tagagaaagttaatcccaccgttacattaa 25943171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 35771554 - 35771441
Alignment:
Q  18 caacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtc 116  Q
    ||||||| |||||||||||||||||| | ||||||| || ||||||| || |||| || |||| ||||||||||  | ||||||||||||||| ||||||    
T  35771554 caacttctaaacctaattcccaaatttccaaaactacaacctacaacttgttaaattcgattttcagaattatatcacttagaattagagaaagttagtc 35771455  T
Q  117 caacccttacctta 130  Q
    | ||||||||||||    
T  35771454 ccacccttacctta 35771441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 130
Target Start/End: Original strand, 16078281 - 16078382
Alignment:
Q  30 ctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaacccttacct 128  Q
    |||||||||||||||| ||||||| || ||||||| || |||| || |||| || |||||||| | ||||||||||||||| ||||||| ||||||||||    
T  16078281 ctaattcccaaattcccaaaactacaaactacaacttgttaaattcgattttcataattataccacttagaattagagaaagttagtcccacccttacct 16078380  T
Q  129 ta 130  Q
    ||    
T  16078381 ta 16078382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 13132443 - 13132363
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaatta 88  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||||  | ||||||| || |||| |||||||||||||||    
T  13132443 caaccgattacaacttctaaacctaattcccaaattcccaaaactacgacctacaacttgttaaattcaatttcagaatta 13132363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 78 - 158
Target Start/End: Original strand, 19195611 - 19195691
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattg 158  Q
    |||||||||||||||| | |  ||||||||||  |||||| |||||||||||| |||||||||||| ||||||||||||||    
T  19195611 tttcagaattatacaactcattattagagaaagctagtcccacccttaccttagattagatgatcggactctacaagattg 19195691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 13698761 - 13698638
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagag 106  Q
    ||||||||||||||||| || ||||||||||||||| | ||||||| || ||| ||||||  |||  ||| |||||||||||  ||| ||| ||||| ||    
T  13698761 caaccaattacaacttctaaccctaattcccaaatttccaaaactacaacctaaaacatgtcaaatccaattttcagaattaatcaacttaaaattaaag 13698662  T
Q  107 aaatttagtccaacccttacctta 130  Q
    ||| ||||||| ||||||||||||    
T  13698661 aaagttagtcctacccttacctta 13698638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 15140143 - 15140265
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagag 106  Q
    ||||||||||||||||  |||||||||||||||||||| ||||||| || ||||||| || |||| |||| ||||||||| |||| | |||||||||| |    
T  15140143 caaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtg 15140241  T
Q  107 aaatttagtccaacccttacctta 130  Q
    ||  ||||||  |||| |||||||    
T  15140242 aaggttagtctcacccatacctta 15140265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 18074693 - 18074619
Alignment:
Q  84 aattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattg 158  Q
    |||||||| | ||||||||||||||| ||| ||| || |||||||||||||||||| ||| ||||||||||||||    
T  18074693 aattataccacttagaattagagaaagttaatcccactcttaccttaaattagatggtcggactctacaagattg 18074619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 4071759 - 4071872
Alignment:
Q  18 caacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtc 116  Q
    ||||||| ||||||||||| ||||| || ||||||| || ||||||| || ||||  |||||| |||| |||||  | ||||||||||||||| ||||||    
T  4071759 caacttctaaacctaattctcaaatccccaaaactacaacctacaacttgttaaatccaattttcagagttatatcacttagaattagagaaagttagtc 4071858  T
Q  117 caacccttacctta 130  Q
    | ||||||||||||    
T  4071859 ccacccttacctta 4071872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 4690715 - 4690650
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcg 143  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||| ||||||||  |||||||||||    
T  4690715 tttcagaattatacaacttagaattagagaaagttagtcccacctttaccttaggttagatgatcg 4690650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 13744728 - 13744655
Alignment:
Q  60 acaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaat 133  Q
    ||||||||||||||| ||||||||||||||||||  || ||||||||||| ||| ||| |||||||| ||||||    
T  13744728 acaacatgctaaacttaatttcagaattatacaacctaaaattagagaaagttaatcccacccttacgttaaat 13744655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 15623950 - 15624070
Alignment:
Q  9 aaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaa 108  Q
    |||||||||||||| | ||||||||||| |||||||| ||||||| || ||||||| |  |||| ||||||||||||| |||| | |||||||||  |||    
T  15623950 aaccaattacaactcctaaacctaattctcaaattcccaaaactacaaactacaacctattaaattcaatttcagaatcatac-acttagaattattgaa 15624048  T
Q  109 atttagtccaacccttacctta 130  Q
      ||||||  ||||||||||||    
T  15624049 ggttagtctcacccttacctta 15624070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 19283079 - 19283135
Alignment:
Q  101 ttagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    ||||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||    
T  19283079 ttagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagatt 19283135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 14160875 - 14160825
Alignment:
Q  111 ttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  14160875 ttagtcccacccttatcttaaattagatgatcggactctacaagattgctc 14160825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 41284963 - 41285043
Alignment:
Q  10 accaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattata 90  Q
    |||||||| |||||| |||||||||||||||||||| ||||||| || ||| ||| |  ||||  ||||||||||||||||    
T  41284963 accaattataacttctaaacctaattcccaaattcctaaaactacaacctataacctattaaatccaatttcagaattata 41285043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 12754664 - 12754582
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||| ||| || ||||||||||||||| ||||||| ||||||||||||  |||   ||| |||||||||||||||||||    
T  12754664 tttcagaatcatataacttagaattagagaaagttagtcccacccttaccttaggttaatcgat-gaactctacaagattgctc 12754582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 32160252 - 32160169
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||| |  | ||||||||||||||| ||||||  ||||||||||||  |||   |||||||||||||||||||||||    
T  32160252 tttcagaattaaattacttagaattagagaaagttagtcttacccttaccttaggttaatcgatcgaactctacaagattgctc 32160169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 58443 - 58385
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattg 158  Q
    ||||||||||  |||||| |||||||||||| |||||||||||| | ||||||||||||    
T  58443 attagagaaagctagtcccacccttaccttagattagatgatcggaatctacaagattg 58385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 10658923 - 10658851
Alignment:
Q  58 ctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||| ||| ||||  |||||||||||| |||||| ||||||||| ||||  ||||||| ||||||||||||    
T  10658923 ctacaaaatgttaaatccaatttcagaatcatacaacttagaattaaagaaggttagtcccacccttacctta 10658851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 8930795 - 8930754
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgat 141  Q
    ||||||||||| |||||| |||||||||||| ||||||||||    
T  8930795 attagagaaatgtagtcccacccttaccttagattagatgat 8930754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 15289052 - 15289157
Alignment:
Q  26 aaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaaccctt 124  Q
    ||||||||||| ||||| |  ||||||| || ||||||| || ||||  |||||| |||| |||||  | ||||||||||||||| || |||| ||||||    
T  15289052 aaacctaattctcaaatcctcaaaactacaacctacaacttgttaaatccaattttcagagttataatacttagaattagagaaagttggtcccaccctt 15289151  T
Q  125 acctta 130  Q
    ||||||    
T  15289152 acctta 15289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 457169 - 457213
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  457169 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 457213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 13870192 - 13870236
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  13870192 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 13870236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 15376029 - 15375985
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  15376029 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 15375985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 16233368 - 16233412
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  16233368 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 16233412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 16460137 - 16460093
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  16460137 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 16460093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 18628412 - 18628456
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  18628412 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 18628456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 20384439 - 20384395
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  20384439 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 20384395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 29052234 - 29052182
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||| |  | ||||||||||||||| ||||||| ||||||||||||    
T  29052234 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 29052182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 32126337 - 32126381
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  32126337 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 32126381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 36704642 - 36704566
Alignment:
Q  59 tacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaatta 135  Q
    ||||||||| ||||   ||||||||||||| |||| ||| ||||| ||||  ||||||| |||||||||||| ||||    
T  36704642 tacaacatgttaaatcaaatttcagaattacacaacttaaaattaaagaaggttagtcccacccttaccttagatta 36704566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 41523766 - 41523810
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  41523766 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 41523810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 41526228 - 41526272
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  41526228 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 41526272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 2e-66; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 7827896 - 7828055
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  7827896 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 7827995  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  7827996 tagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctc 7828055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 23150415 - 23150256
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  23150415 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 23150316  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  23150315 tagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctc 23150256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 19655359 - 19655200
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||||| |||||||    
T  19655359 tattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgttaaactcaatttcagaattatacaacttagaat 19655260  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  19655259 tagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattgctc 19655200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 27125605 - 27125446
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||| ||||||||||||||||||||| ||||||||||| | ||||| || |||||||||||||| |||||||| ||| |||||||| |||||||    
T  27125605 tattaacaactaattacaacttcaaaacctaagtcccaaattcccataactacaacctacaacatgctaatctcaattttagacttatacaacttagaat 27125506  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  27125505 tagagaaagttagtctcacccttaccttaaattagatgatcggactctacaagattgctc 27125446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 18703503 - 18703648
Alignment:
Q  13 aattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaattt 112  Q
    |||||||||||||||| |||||||||||||||| | ||||| || ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||    
T  18703503 aattacaacttcaaaatctaattcccaaattcccataactacaacctacaacattctaaactcaatttcagaattatacaacttagaattagagaaagtt 18703602  T
Q  113 agtccaacccttaccttaaattagatgatcgaactctacaagattg 158  Q
    ||||| || |||||||||||||||||||||| ||||||||||||||    
T  18703603 agtcccacacttaccttaaattagatgatcggactctacaagattg 18703648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 18709438 - 18709583
Alignment:
Q  13 aattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaattt 112  Q
    |||||||||||||||| |||||||||||||||| | ||||| || ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||    
T  18709438 aattacaacttcaaaatctaattcccaaattcccataactacaacctacaacattctaaactcaatttcagaattatacaacttagaattagagaaagtt 18709537  T
Q  113 agtccaacccttaccttaaattagatgatcgaactctacaagattg 158  Q
    ||||| || |||||||||||||||||||||| ||||||||||||||    
T  18709538 agtcccacacttaccttaaattagatgatcggactctacaagattg 18709583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 15890840 - 15890712
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||   ||||||| || |||||||||| ||||||||||||||||||||||||| |||||||    
T  15890840 tattaacaaccaattacaacttcaaaacctaattcccaaattaacaaaactacaacctacaacatgttaaactcaatttcagaattatacaacttagaat 15890741  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||| ||||||||||||    
T  15890740 tagagaaagttagtcccacccttacctta 15890712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 27330109 - 27329981
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||| | | ||||| || |||||||||| |||||||||||||||||||||||||  ||||||    
T  27330109 tattaacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacatgttaaactcaatttcagaattatacaacctagaat 27330010  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||  || |||||||||    
T  27330009 tagagaaagttagtcacactcttacctta 27329981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 27390849 - 27390721
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||| | | ||||| || |||||||||| |||||||||||||||||||||||||  ||||||    
T  27390849 tattaacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacatgttaaactcaatttcagaattatacaacctagaat 27390750  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||  || |||||||||    
T  27390749 tagagaaagttagtcacactcttacctta 27390721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 24267801 - 24267900
Alignment:
Q  30 ctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctt 129  Q
    ||||||| |||||||| | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  24267801 ctaattctcaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctt 24267900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 18928614 - 18928733
Alignment:
Q  12 caattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaat 110  Q
    ||||||||||||| |||||||||| ||||||||| ||||||  || ||||||| || |||| ||||||| ||||||||||| | |||||||||||||||     
T  18928614 caattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaag 18928713  T
Q  111 ttagtccaacccttacctta 130  Q
    ||||||| ||||||||||||    
T  18928714 ttagtcctacccttacctta 18928733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 18585733 - 18585854
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||| |||||||||||| ||||| | ||||||| || |||| || || ||||  || ||||||||| |||||| |||||||||||    
T  18585733 aacaaccaattacaacttctaaacctaattcctaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 18585832  T
Q  106 gaaatttagtccaacccttacc 127  Q
    |||| ||||||| |||||||||    
T  18585833 gaaagttagtcccacccttacc 18585854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 19235047 - 19235175
Alignment:
Q  1 ttattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaa 100  Q
    |||||||||||||||||| ||||||||||||||| |||||||||  |||   | || | ||||||| ||||| ||||||||||||||||||||  || ||    
T  19235047 ttattaacaaccaattacgacttcaaaacctaat-cccaaattcacaaattcacaaacaacaacatcctaaaatcaatttcagaattatacaacctaaaa 19235145  T
Q  101 ttagagaaatttagtccaacccttacctta 130  Q
    ||||||||| ||| ||| ||||||| ||||    
T  19235146 ttagagaaagttaatcccacccttaactta 19235175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 28948502 - 28948627
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaac-taaaatctacaacatgctaaactcaatttcagaattatacaaattagaattag 104  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||| || ||  ||| || || ||||  || ||||||||| |||||| ||||||||||    
T  28948502 aacaaccaattacaacttctaaacctaattcccaaatttctaaaacctacaacttaccacttgttaaatccagtttcagaatcatacaacttagaattag 28948601  T
Q  105 agaaatttagtccaacccttacctta 130  Q
    ||||| ||||||  ||||||||||||    
T  28948602 agaaagttagtctcacccttacctta 28948627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 19401028 - 19401147
Alignment:
Q  12 caattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagagaaat 110  Q
    ||||||||||||  ||||||||||| |||||||| ||||||| || ||||||| || |||| |||| ||||||||| |||| | |||||||||| |||      
T  19401028 caattacaacttataaacctaattctcaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtgaagg 19401126  T
Q  111 ttagtccaacccttaccttaa 131  Q
    ||||||| |||||||||||||    
T  19401127 ttagtcccacccttaccttaa 19401147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 17318184 - 17318135
Alignment:
Q  112 tagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  17318184 tagtcccacccttaccttaaattagatgatcggactctacaagattgctc 17318135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 20410564 - 20410481
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||   |  ||||||||||  || | | ||||||||||||||||||||||||| |||||||||||||||||    
T  20410564 tttcagaattatacaacccattattagagaaagctatttccacccttaccttaaattagatgatcgcactctacaagattgctc 20410481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 27572188 - 27572121
Alignment:
Q  64 catgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaa 131  Q
    |||| |||| |||||||||||||||||| | ||||||||||||||| ||||||  |||||||||||||    
T  27572188 catgttaaattcaatttcagaattatacgacttagaattagagaaagttagtctcacccttaccttaa 27572121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 30673468 - 30673402
Alignment:
Q  64 catgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||||||||||| ||||||||||  || ||||||||||| ||| ||| ||||||||||||    
T  30673468 catgctaaactcaatttcaaaattatacaacctaaaattagagaaagttaatcccacccttacctta 30673402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 15998880 - 15998941
Alignment:
Q  69 taaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||  |||||||||||||||| ||||||||||||||| ||||||  ||||||||||||    
T  15998880 taaactctttttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 15998941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 23501601 - 23501724
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaa-ttccaaaaactaaaatctacaacatgctaaactca-atttcagaattatacaaattagaattaga 105  Q
    |||| |||||||||||| |||||||||||||||| |||||||||||| || ||||||| || |||| |||  ||||||||||| || | |||||||||      
T  23501601 caacaaattacaacttctaaacctaattcccaaatttccaaaaactacaacctacaacttgttaaattcagttttcagaattaaac-atttagaattatt 23501699  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||  ||||||  ||||||||||||    
T  23501700 gaaggttagtctcacccttacctta 23501724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 24550240 - 24550168
Alignment:
Q  58 ctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||| ||||  |||||||||||||| |||| ||| ||||| |||| |||||||| ||||||||||||    
T  24550240 ctacaacatgttaaatccaatttcagaattacacaacttacaattaaagaagtttagtcccacccttacctta 24550168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 19167965 - 19167926
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaa 41  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  19167965 tattaacaaccaattacgacttcaaaacctaattcccaaa 19167926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 31732009 - 31731904
Alignment:
Q  26 aaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaaccctt 124  Q
    ||||||||||| ||||| || ||||||| || ||||||| ||  |||  |||||| ||||||||||  | |||||||| |||||| ||||||| ||||||    
T  31732009 aaacctaattctcaaatccccaaaactacaacctacaacttgtcaaatccaattttcagaattataacacttagaattggagaaagttagtcccaccctt 31731910  T
Q  125 acctta 130  Q
    ||||||    
T  31731909 acctta 31731904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 12041672 - 12041620
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||||||||| ||||||||| ||||  ||||||| ||||||||||||    
T  12041672 tttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 12041620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 26923761 - 26923709
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaactcaattt 80  Q
    |||||||||||||||| |||||||||||| |||||||||| |||| |||||||    
T  26923761 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaattcaattt 26923709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 19167923 - 19167853
Alignment:
Q  60 acaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||||||||||| ||||||||||||||  ||  |||||| ||| ||| | | ||||||||||||    
T  19167923 acaacatgctaaactcaatatcagaattatacaacctaatattagacaaagttaattccacccttacctta 19167853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 23431466 - 23431420
Alignment:
Q  111 ttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    ||||||| || ||||||||| |||||||||||| |||||||||||||    
T  23431466 ttagtcccacgcttaccttagattagatgatcggactctacaagatt 23431420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 25922034 - 25922084
Alignment:
Q  111 ttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||| |||||||||||| ||||||||||||  |||||| |||||||||    
T  25922034 ttagtcccacccttaccttagattagatgatcggtctctacgagattgctc 25922084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 19825516 - 19825455
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||  |||||  |||||||||||| ||||||||||||  |||||| |||||||||    
T  19825516 attagagaaagctagtctcacccttaccttagattagatgatcggtctctacgagattgctc 19825455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 1540227 - 1540183
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  1540227 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 1540183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 2290494 - 2290442
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaactcaattt 80  Q
    |||||||||||||||| |||||||||||  |||||||||| |||| |||||||    
T  2290494 cctaattcccaaattctcaaaaactaaaccctacaacatgttaaattcaattt 2290442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 18333908 - 18333864
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  18333908 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 18333864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 18343037 - 18343081
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  18343037 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 18343081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 22783074 - 22783118
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  22783074 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 22783118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 24423393 - 24423437
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  24423393 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 24423437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 33865124 - 33865168
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  33865124 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 33865168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 4842 - 4683
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||  | |||||||||||||||||||||||||||||||||||| |||||||    
T  4842 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacgacctacaacatgctaaactcaatttcagaattatacaacttagaat 4743  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  4742 tagagaaagttagtccgacccttaccttaaattagatgatcggactctacaagattgctc 4683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 6e-64; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 17044890 - 17045045
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  17044890 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 17044989  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  17044990 tagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 17045045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 22306711 - 22306552
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  22306711 tattaacaaccaattacaacttcaaaacctaattcacaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 22306612  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  22306611 tagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctc 22306552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 17047050 - 17047205
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||| |||||||||||||| || ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  17047050 tattaacaaccaattacaacttcaaaacttaattcccaaattcaaataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 17047149  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  17047150 tagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagatt 17047205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 11259354 - 11259514
Alignment:
Q  1 ttattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaa 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||  | ||||| |||||||||||||||||| |||||||||||||||||||| ||||||    
T  11259354 ttattaacaatcaattacaacttcaaaacctaattcccaaattctcataactacaatctacaacatgctaaattcaatttcagaattatacaacttagaa 11259453  T
Q  101 ttagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||| ||||||  |||||||||||||||||||| |||| |||||||||||||||||    
T  11259454 ttagagaaagttagtctcacccttaccttaaattagataatcggactctacaagattgctc 11259514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 49900654 - 49900809
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  49900654 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 49900753  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||| ||||||| |||||||||||| ||||||||||||  |||||| |||||    
T  49900754 tagagaaaattagtcccacccttaccttagattagatgatcggtctctacgagatt 49900809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 41172499 - 41172340
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||||| |||||| | ||||| || ||||||||||||||||||||||||||| |||||||| ||| ||     
T  41172499 tattaacaaccaattacaacttcaaaacctaattccctaattcccataactacaacctacaacatgctaaactcaatttcagagttatacaacttataag 41172400  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  41172399 tagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattgctc 41172340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 17519001 - 17518846
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||||||||| ||||| |||||||||||||||||||| |||||||    
T  17519001 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacattctaaagtcaatttcagaattatacaacttagaat 17518902  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||| ||||||| |||||| ||||| |||||||||||| |||||| ||||||    
T  17518901 tagagaaagttagtcccacccttgccttagattagatgatcggactctagaagatt 17518846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 17533863 - 17533708
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||||||||| ||||| |||||||||||||||||||| |||||||    
T  17533863 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacattctaaagtcaatttcagaattatacaacttagaat 17533764  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||| ||||||| |||||| ||||| |||||||||||| |||||| ||||||    
T  17533763 tagagaaagttagtcccacccttgccttagattagatgatcggactctagaagatt 17533708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 40807920 - 40808048
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  40807920 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 40808019  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||| ||||||||||||    
T  40808020 tagagaaagttagtcccacccttacctta 40808048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 157
Target Start/End: Original strand, 14508775 - 14508926
Alignment:
Q  7 acaaccaattacaacttc-aaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    |||||||||||||||||| ||||||||||||| ||||||| | ||||| || |||||||||||||| ||||||||||||||||||||| |||||||||||    
T  14508775 acaaccaattacaacttccaaaacctaattccaaaattcccataactacaacctacaacatgctaacctcaatttcagaattatacaacttagaattaga 14508874  T
Q  106 gaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||| ||||||  ||||||||| ||||||||||||||| |||||||||||||    
T  14508875 gaaagttagtctcacccttaccataaattagatgatcggactctacaagatt 14508926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 17539030 - 17539185
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| | ||||| || |||||||||| |||| |||||||||||||||||||| |||||||    
T  17539030 tattaacaaccaattacatcttcaaaacctaatttccaaattcccataactacaacctacaacatgataaaatcaatttcagaattatacaacttagaat 17539129  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||| ||| ||||||  ||||||||||||||||||||||||| | |||||||||||    
T  17539130 tagataaagttagtctcacccttaccttaaattagatgatcggattctacaagatt 17539185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 17693991 - 17694150
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||| | ||||||||||||||||| ||||||| |||||| | | ||||| || ||||||||||||||||||||||| |||||||||||| |||||||    
T  17693991 tattaacgatcaattacaacttcaaaatctaattcacaaatttccataactacaacctacaacatgctaaactcaattttagaattatacaacttagaat 17694090  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||  |||||||| |||||||||||||||| |||||||||||||||||    
T  17694091 tagagaaagttagtctcacccttacattaaattagatgatcggactctacaagattgctc 17694150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 161
Target Start/End: Original strand, 35354530 - 35354685
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||| |||||||||||||||||||||||| ||||||||| | ||||| || | |||||||||||||||||||||||||||||||||| ||| |||||||    
T  35354530 aacaatcaattacaacttcaaaacctaatttccaaattcccataactacaaccaacaacatgctaaactcaatttcagaattatacaacttaaaattaga 35354629  T
Q  106 gaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||| ||||||| || |||| ||||||||||||||| | |||||||||||||||||    
T  35354630 gaaagttagtcccacacttagcttaaattagatgattggactctacaagattgctc 35354685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 40812757 - 40812909
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||| |||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||| ||| |||||||    
T  40812757 tattaacaatcaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatgcaacttagaat 40812856  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattg 158  Q
    |||||||| ||||||| |||||||||||| ||    |||||||||||||||| ||||    
T  40812857 tagagaaagttagtcccacccttaccttagat----tgatcgaactctacaaaattg 40812909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 44274342 - 44274470
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||  ||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  44274342 tattaacaaccaattacaacttcaaaatataattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 44274441  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||| ||||||||||||    
T  44274442 tagagaaagttagtcccacccttacctta 44274470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 10563632 - 10563760
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||| | | ||||| || ||||||||||||||||||||||||| |||||||||| ||| |||    
T  10563632 tattaacaaccaattacaacttcaaaacctaattcccaaatttccataactacaaactacaacatgctaaactcaatttcataattatacaacttaaaat 10563731  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||| ||| ||||||||    
T  10563732 tagagaaagttagtcccaccattacctta 10563760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 50348154 - 50348041
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||||||||||||||||||||||| | |||||||||| |||||||    
T  50348154 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaattttaaaattatacaacttagaat 50348055  T
Q  102 tagagaaatttagt 115  Q
    |||||||| |||||    
T  50348054 tagagaaagttagt 50348041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 10311451 - 10311575
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||  | ||||| || ||||||||||| ||| ||||||||||||||||||||  ||||||    
T  10311451 tattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgcaaaattcaatttcagaattatacaacgtagaat 10311550  T
Q  102 tagagaaatttagtccaacccttac 126  Q
    |||||||| ||||||| ||||||||    
T  10311551 tagagaaagttagtcccacccttac 10311575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 67 - 161
Target Start/End: Original strand, 17541423 - 17541517
Alignment:
Q  67 gctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  17541423 gctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattgctc 17541517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 15931624 - 15931481
Alignment:
Q  13 aattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaattt 112  Q
    |||||||||||| |||||||||||| ||||||  | ||||| || ||| |||||||||||||| ||||||||||||||| | ||||||||||||||| ||    
T  15931624 aattacaacttcgaaacctaattccaaaattctcataactacaacctaaaacatgctaaactctatttcagaattatac-acttagaattagagaaagtt 15931526  T
Q  113 agtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    ||||  ||| ||||||||||||| ||||||| |||||||||||||    
T  15931525 agtctcacctttaccttaaattaaatgatcggactctacaagatt 15931481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 11563654 - 11563790
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagag 106  Q
    ||||||||||||||||  |||||||||||||||||||| ||||||| || ||||||| || |||| |  |||| ||||||||||| | ||||||||||||    
T  11563654 caaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaacttgttaaatttgattttcagaattataccacttagaattagag 11563753  T
Q  107 aaatttagtccaacccttaccttaaattagatgatcg 143  Q
    ||  ||||||| |||||||||||| ||||||||||||    
T  11563754 aaggttagtcccacccttaccttagattagatgatcg 11563790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 35064658 - 35064566
Alignment:
Q  13 aattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||||||||||||||| | | ||||| || ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  35064658 aattacaacttcaaaacctaattcccaaatttccataactacaacctacaacatgctaaactcaatttcaaaattatacaacttagaattaga 35064566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 9511040 - 9510916
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||| || || ||||  || ||||||||| |||||| |||||||||||    
T  9511040 aacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 9510941  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||| |||||   ||||||||||||    
T  9510940 gaaagttagtttcacccttacctta 9510916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 9519015 - 9518891
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||| || || ||||  || ||||||||| |||||| |||||||||||    
T  9519015 aacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 9518916  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||| |||||   ||||||||||||    
T  9518915 gaaagttagtttcacccttacctta 9518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 19568328 - 19568208
Alignment:
Q  10 accaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaa 109  Q
    ||||||||||||||| || ||||||||||||||||| ||||||| || ||||||| || ||||   | ||||||||| |||||| |||||||||||||||    
T  19568328 accaattacaacttctaaccctaattcccaaattcccaaaactacaacctacaacctgttaaatctagtttcagaatcatacaacttagaattagagaaa 19568229  T
Q  110 tttagtccaacccttacctta 130  Q
     ||||||| ||||||||||||    
T  19568228 gttagtcccacccttacctta 19568208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 33565018 - 33565139
Alignment:
Q  10 accaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagagaa 108  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||  || ||||||| || |||| |||| |||||||||||||| | ||||||||||||||    
T  33565018 accaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaa 33565117  T
Q  109 atttagtccaacccttacctta 130  Q
    | ||||||  ||||||||||||    
T  33565118 agttagtcacacccttacctta 33565139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 42324094 - 42323971
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagag 106  Q
    ||||||||||||||||| || ||||||| ||||||||| ||||||| || ||||||||||  ||| |||| |||||||||||||||| ||| ||||| |     
T  42324094 caaccaattacaacttctaaccctaatttccaaattcccaaaactacaacctacaacatgtcaaattcaattttcagaattatacaacttaaaattaaat 42323995  T
Q  107 aaatttagtccaacccttacctta 130  Q
    ||  ||||||| ||||||||||||    
T  42323994 aatgttagtcccacccttacctta 42323971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 35961049 - 35960928
Alignment:
Q  10 accaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagagaa 108  Q
    ||||||||||||||| |||||||||| ||||||| | ||||||  || ||||||| || |||| |||| |||||||||||||| |  |||||||||||||    
T  35961049 accaattacaacttctaaacctaatttccaaatttccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacatagaattagagaa 35960950  T
Q  109 atttagtccaacccttacctta 130  Q
    | ||| ||| ||||||||||||    
T  35960949 agttaatcccacccttacctta 35960928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 16050875 - 16050979
Alignment:
Q  26 aaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaaccctta 125  Q
    ||||||||||| ||||| |  ||||||| ||  |||||| || ||||| |||||||||||| |||||| ||||||||||||||| ||||||| |||||||    
T  16050875 aaacctaattctcaaatcctcaaaactacaacatacaacttgttaaacccaatttcagaatcatacaacttagaattagagaaagttagtcccaccctta 16050974  T
Q  126 cctta 130  Q
    |||||    
T  16050975 cctta 16050979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 15566744 - 15566823
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||||||||||| ||||||||||||||| ||||||| |||||||| ||| |||| ||||||| |||| ||||||||    
T  15566744 tttcagaattatacaacttagaattagagaaagttagtcccacccttactttagattacatgatcggactcaacaagatt 15566823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 49968981 - 49968858
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagag 106  Q
    ||||||||||||||||  |||||||||||||||||||  ||||||| || ||||||| || |||| |||| ||||||||| |||| | |||||||||| |    
T  49968981 caaccaattacaacttataaacctaattcccaaattctcaaaactacaagctacaacctgttaaattcaattttcagaatcatac-acttagaattagtg 49968883  T
Q  107 aaatttagtccaacccttaccttaa 131  Q
    ||  ||||||| || ||||||||||    
T  49968882 aaggttagtcccactcttaccttaa 49968858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 13185834 - 13185947
Alignment:
Q  18 caacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactc-aatttcagaattatacaaattagaattagagaaatttagtc 116  Q
    ||||||| |||||||||||||||||| | ||||||| || ||||||| || |||| || | ||| |||||||||  | ||| ||||||||||| ||||||    
T  13185834 caacttctaaacctaattcccaaatttccaaaactacaacctacaacttgttaaattcgatttttagaattatatcacttaaaattagagaaagttagtc 13185933  T
Q  117 caacccttacctta 130  Q
    | ||||||||||||    
T  13185934 ccacccttacctta 13185947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 45530725 - 45530572
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcc-caaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattaga 105  Q
    ||||||||||||||||| || ||||||| | |||||||| ||||||| || | ||||| || |||| ||||||| |||||| ||| |  |||||||||      
T  45530725 caaccaattacaacttctaaccctaatttcgcaaattcccaaaactacaacccacaacctgttaaattcaattttcagaatcatatac-ttagaattatt 45530627  T
Q  106 gaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
     ||  ||||||| | | ||||||||||||||||||||| |||||||||||||||||    
T  45530626 aaatgttagtcccatc-ttaccttaaattagatgatcggactctacaagattgctc 45530572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 37038978 - 37039080
Alignment:
Q  8 caaccaattacaacttcaaaacctaatt-cccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||  || ||||||| |||||||||| ||||||| || |||||||||| ||||  ||| |||||||||||||||| ||| ||||| |    
T  37038978 caaccaattacaacttttaaccctaatttcccaaattcccaaaactacaacctacaacatgttaaatccaattttcagaattatacaacttataattaaa 37039077  T
Q  106 gaa 108  Q
    |||    
T  37039078 gaa 37039080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 50347646 - 50347604
Alignment:
Q  119 acccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  50347646 acccttaccttaaattagatgatcggactctacaagattgctc 50347604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 15446920 - 15446868
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||| |||||| ||||||||||||||| ||||||| ||||||||||||    
T  15446920 tttcagaataatacaacttagaattagagaaagttagtcccacccttacctta 15446868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 24177840 - 24177736
Alignment:
Q  26 aaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaaccctta 125  Q
    |||| ||||||||||||| | ||||||| || |||| || |  ||||  || |||||||||||||||| ||| ||||||||||| || |||| |||||||    
T  24177840 aaacataattcccaaatttccaaaactacaacctaccacctattaaatccagtttcagaattatacaacttataattagagaaagtttgtcccaccctta 24177741  T
Q  126 cctta 130  Q
    |||||    
T  24177740 cctta 24177736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 12509422 - 12509350
Alignment:
Q  58 ctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||| ||||| ||||  ||||||||||||||||||| ||||||||| ||||  || |||| ||||||||||||    
T  12509422 ctaccacatgttaaatccaatttcagaattatacaacttagaattaaagaaggtttgtcccacccttacctta 12509350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 36528851 - 36528919
Alignment:
Q  62 aacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||| ||||| |||| |||||||||||  | ||||||||||||||| ||| ||| ||||||||||||    
T  36528851 aacatgttaaacccaatctcagaattatattacttagaattagagaaagttaatcccacccttacctta 36528919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 11885658 - 11885560
Alignment:
Q  29 cctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaacccttacc 127  Q
    |||||||| |||||||| ||| ||| || ||||||| || ||||  |||||| ||||||||||  | ||||||||||||||| ||||||| |||||||||    
T  11885658 cctaattctcaaattcccaaa-ctacaacctacaacttgttaaatccaattttcagaattataacacttagaattagagaaagttagtcccacccttacc 11885560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 6159446 - 6159484
Alignment:
Q  119 acccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||||||| |||||||||||| |||||||||||||    
T  6159446 acccttaccttagattagatgatcggactctacaagatt 6159484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 50350835 - 50350793
Alignment:
Q  111 ttagtccaacccttaccttaaattagatgatcgaactctacaa 153  Q
    ||||||| |||||||||||| |||||||||||| |||||||||    
T  50350835 ttagtcccacccttaccttagattagatgatcggactctacaa 50350793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 53646078 - 53646032
Alignment:
Q  111 ttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    ||||||| |||||||||||| |||||||||||  |||||||||||||    
T  53646078 ttagtcccacccttaccttagattagatgatcagactctacaagatt 53646032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 1864469 - 1864416
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaactcaatttc 81  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||  |||||||    
T  1864469 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttc 1864416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 5200284 - 5200243
Alignment:
Q  89 tacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||    
T  5200284 tacaacttagaattagagaaagttagtcccacccttacctta 5200243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 14641578 - 14641517
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||  || ||| |||||||||||| ||||||||||||  |||||| |||||||||    
T  14641578 attagagaaagctaatcccacccttaccttagattagatgatcggtctctacgagattgctc 14641517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 6468450 - 6468406
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  6468450 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 6468406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 17464024 - 17464068
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  17464024 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 17464068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 34160172 - 34160216
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  34160172 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 34160216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 45577757 - 45577713
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  45577757 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 45577713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 55477338 - 55477382
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  55477338 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 55477382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 6e-64; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 19676635 - 19676794
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  19676635 tattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 19676734  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  19676735 tagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgctc 19676794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 21046177 - 21046020
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  21046177 tattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 21046078  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgc 159  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  21046077 tagagaaagttagtcccacccttaccttaaattagatgatcggactctacaagattgc 21046020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 20633762 - 20633600
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattcc---aaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattag 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||   || ||||| || |||||||||||||||||||||||||||||||||||| ||||    
T  20633762 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataataactataacctacaacatgctaaactcaatttcagaattatacaacttag 20633663  T
Q  99 aattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| || ||||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  20633662 aattagagcaagttagtcccacccttatcttaaattagatgatcggactctacaagattgctc 20633600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 16058441 - 16058287
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||| ||||||||||||||| | | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  16058441 tattaacaaccaattacaacttcaaa-cctaattcccaaatttccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 16058343  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||    
T  16058342 tagagaaatttagtcccacccttaccttagattagatgatcggactctacaagatt 16058287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 42912973 - 42913101
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||| ||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  42912973 tattaacaaccaattacaacttcaaaacctaattcctaaattcccacaactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 42913072  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||  ||||||||||||    
T  42913073 tagagaaagttagtctcacccttacctta 42913101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 7052046 - 7051922
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||| ||| |||||||||||||||||| | ||||||||||||||| || || ||||  || ||||||||| |||||| |||||||||||    
T  7052046 aacaaccaattacaatttctaaacctaattcccaaatttctaaaactaaaatctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 7051947  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||| ||||||| ||||||||||||    
T  7051946 gaaagttagtcccacccttacctta 7051922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 24723475 - 24723351
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||| |||| |||||| |||||| | ||||||| ||||||| || || |||| ||| ||||||||| |||||| |||||||||||    
T  24723475 aacaaccaattacaacttctaaacataattctcaaatttccaaaactacaatctaccacctgttaaattcagtttcagaatcatacaacttagaattaga 24723376  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||| ||||||| ||||||||||||    
T  24723375 gaaagttagtcccacccttacctta 24723351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 13302849 - 13302954
Alignment:
Q  26 aaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaaccctt 124  Q
    |||||||||||||||||||| ||||||| || ||||||| || |||| ||||||| ||||||||||| | ||||||||||||||| ||||||  ||||||    
T  13302849 aaacctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtctcaccctt 13302948  T
Q  125 acctta 130  Q
    ||||||    
T  13302949 acctta 13302954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 51324432 - 51324556
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||  ||||||||||||||| |||| ||||||| || |||| || || ||||  || ||||||||| |||||| ||||||||||     
T  51324432 aacaaccaattacaacttttaaacctaattcccaatttcccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattagg 51324531  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||| ||||||  ||||||||||||    
T  51324532 gaaagttagtctcacccttacctta 51324556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 7320716 - 7320594
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagag 106  Q
    |||||||||||||| || |||| ||||||||||||||| ||||||| |||||||||| || |||| |||| ||||||||| |||| | |||||||||| |    
T  7320716 caaccaattacaacatctaaacataattcccaaattcccaaaactacaatctacaacctgttaaattcaattttcagaataatac-acttagaattagtg 7320618  T
Q  107 aaatttagtccaacccttacctta 130  Q
     |  ||||||| ||||||||||||    
T  7320617 taggttagtcccacccttacctta 7320594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 28476786 - 28476703
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||||||||||| | |  ||||||||||| |||||| |||||||||||| ||||||||| || ||||| |||||||||||    
T  28476786 tttcagaattatacaactcattattagagaaatctagtcccacccttaccttagattagatgaccggactctgcaagattgctc 28476703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 21168877 - 21168985
Alignment:
Q  22 ttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacc 121  Q
    |||||||||| ||||||||||||  |||   | || | ||||||||||||||||||||| ||||||||||||  || ||||||||||| ||| | | |||    
T  21168877 ttcaaaaccttattcccaaattcacaaattcacaaacaacaacatgctaaactcaattttagaattatacaacctaaaattagagaaagttaattccacc 21168976  T
Q  122 cttacctta 130  Q
    |||||||||    
T  21168977 cttacctta 21168985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 41225473 - 41225423
Alignment:
Q  111 ttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||| ||||||||||||||||||||||||| |||| ||||||||||||    
T  41225473 ttagtcccacccttaccttaaattagatgatcgtactcgacaagattgctc 41225423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 41226726 - 41226676
Alignment:
Q  111 ttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||| ||||||||||||||||||||||||| |||| ||||||||||||    
T  41226726 ttagtcccacccttaccttaaattagatgatcgtactcgacaagattgctc 41226676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 20588660 - 20588721
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||  || ||| |||||||||||||||| |||||||| |||||||||||||||||    
T  20588660 attagagaaagctaatcccacccttaccttaaattggatgatcggactctacaagattgctc 20588721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 20593198 - 20593259
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||  || ||| |||||||||||||||| |||||||| |||||||||||||||||    
T  20593198 attagagaaagctaatcccacccttaccttaaattggatgatcggactctacaagattgctc 20593259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 22350646 - 22350795
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagag 106  Q
    |||||| || ||||||| || ||||||||||||||||| ||||||| || ||||||| || |||| |||| ||||||||| |||  | | |||||||  |    
T  22350646 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaatcata-tactcagaattattg 22350744  T
Q  107 aaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||  ||||||| |||||||||||| ||    |||||| |||||||||||||||||    
T  22350745 aaggttagtcccacccttaccttagat----tgatcggactctacaagattgctc 22350795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 42697732 - 42697836
Alignment:
Q  27 aacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatt-tcagaattatacaaattagaattagagaaatttagtccaaccctta 125  Q
    |||||||||| ||||| |  ||||||| || |||||||||| ||||  ||||| |||||||||||||| ||||||||| ||||  ||||||  |||||||    
T  42697732 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtctcaccctta 42697831  T
Q  126 cctta 130  Q
    |||||    
T  42697832 cctta 42697836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 51336479 - 51336531
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||| |||||| ||||||||||||||| ||||||| ||||||||||||    
T  51336479 tttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 51336531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 44822145 - 44822108
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaatt 43  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  44822145 aacaaccaattacaacttctaaacctaattcccaaatt 44822108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 45499374 - 45499446
Alignment:
Q  60 acaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaat 133  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||| | ||| ||| |||||||| ||||||    
T  45499374 acaatatgctaaactcaatttcagaattatacaacctaaaattagagagagttaatcc-acccttacgttaaat 45499446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 12327795 - 12327743
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||| |||||| ||||||||||||||| ||||||  ||||||||||||    
T  12327795 tttcagaatcatacaacttagaattagagaaagttagtctcacccttacctta 12327743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 21239101 - 21239049
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||| |||||| ||||||||||||||| ||||||| |||| |||||||    
T  21239101 tttcagaatcatacaacttagaattagagaaagttagtcccacccatacctta 21239049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 4595944 - 4595853
Alignment:
Q  40 aattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||| ||||||| || ||||||| || |||| || |||| |||||||||||   ||||||||||||||| ||||||  ||||||||||||    
T  4595944 aattcccaaaactacaacctacaacttgttaaattcgattttcagaattatacctcttagaattagagaaagttagtctcacccttacctta 4595853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 12710867 - 12710950
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||   |  ||||||||||  |||||| | | |||||||| |||||||||| | |||||||||||||||||    
T  12710867 tttcagaattatacaacccaatattagagaaagctagtcccatctttaccttagattagatgatgggactctacaagattgctc 12710950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 8276112 - 8276079
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaa 41  Q
    ||||||||||||||||| ||||||||||||||||    
T  8276112 caaccaattacaacttctaaacctaattcccaaa 8276079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 8306628 - 8306689
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||  |||||| || ||||||||| ||||||||||||  |||||| |||||||||    
T  8306628 attagagaaagctagtcccactcttaccttagattagatgatcggtctctacgagattgctc 8306689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 38056795 - 38056762
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaa 41  Q
    ||||||||||||||||| ||||||||||||||||    
T  38056795 caaccaattacaacttctaaacctaattcccaaa 38056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 13989712 - 13989756
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  13989712 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 13989756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 14237757 - 14237713
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  14237757 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 14237713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 21474400 - 21474356
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  21474400 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 21474356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 23593046 - 23593002
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  23593046 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 23593002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 29763684 - 29763632
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||| |  | ||||||||||||||| ||||||| ||||||||||||    
T  29763684 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 29763632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 41373320 - 41373364
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  41373320 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 41373364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 46197797 - 46197745
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||| |  | ||||||||||||||| ||||||| ||||||||||||    
T  46197797 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 46197745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 51083124 - 51083168
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  51083124 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 51083168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 121; Significance: 3e-62; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 596 - 440
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  596 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 497  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattg 158  Q
    |||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||    
T  496 tagagaaagttagtcccacccttaccttaaattagatgatcagactctacaagattg 440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 120; Significance: 1e-61; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 31918 - 32077
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||| |||||||||||||||||||||||||||||||| |||||||    
T  31918 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataacatgctaaactcaatttcagaattatacaacttagaat 32017  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  32018 tagagaaagttagtcacacccttaccttaaattagatgatcggactctacaagattgctc 32077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 37225 - 37384
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||| |||||||||||||||||||||||||||||||| |||||||    
T  37225 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataacatgctaaactcaatttcagaattatacaacttagaat 37324  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  37325 tagagaaagttagtcacacccttaccttaaattagatgatcggactctacaagattgctc 37384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 77611 - 77766
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  77611 tattaacaacctattacaacttcaaaacctaattctcaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 77710  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||| ||||||  |||||||||||| |||||||||||  |||||||||||||    
T  77711 tagagaaagttagtctcacccttaccttagattagatgatcagactctacaagatt 77766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 1129 - 1287
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  1129 tattaacaaccaattacaacttcaaaacctaattcccaaattacaataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 1228  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgct 160  Q
    |||||||| ||||||| ||||||||||||||||||||||||| | ||||||| ||||||    
T  1229 tagagaaagttagtcccacccttaccttaaattagatgatcggattctacaaaattgct 1287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 119; Significance: 5e-61; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 34263 - 34421
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||| | ||||| || ||||||||||||||||||||||||||||||| ||||||||||||    
T  34263 tattaacaaccaattacaacttcaaaacctgattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattaaacaaattagaat 34362  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgct 160  Q
    |||||||| ||||||| ||||||||||||||||||||||||| ||||||||| ||||||    
T  34363 tagagaaagttagtcccacccttaccttaaattagatgatcggactctacaaaattgct 34421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 5930 - 6002
Alignment:
Q  58 ctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||| |||| |||||||||||||||||||| ||||||||| ||||  ||||||| ||||||||||||    
T  5930 ctacaacatgttaaattcaatttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 6002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 8e-60; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 42818036 - 42817876
Alignment:
Q  1 ttattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaa 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| ||||||    
T  42818036 ttattaacaaccaattacaacttcaaaatctaatttccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaa 42817937  T
Q  101 ttagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||| | ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  42817936 ttagagaaagtaagtcccacccttaccttaaattagatgatcggactctacaagattgctc 42817876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 19140689 - 19140847
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||    
T  19140689 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacttgctaaactcaatttcagaattatacaacttagaat 19140788  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||  |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  19140789 tagagaaa-gtagtcccacccttaccttaaattagatgatcggactctacaagattgctc 19140847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 155
Target Start/End: Complemental strand, 39936138 - 39935982
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaaca---tgctaaactcaatttcagaattatacaaattag 98  Q
    |||||||||| |||||||||||||||||||||||| |||||||| | ||||| || ||||||||   ||||||||||||||||| |||||||||| ||||    
T  39936138 tattaacaactaattacaacttcaaaacctaattcgcaaattcccataactacaacctacaacaacatgctaaactcaatttcataattatacaacttag 39936039  T
Q  99 aattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaaga 155  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||||| |||||||||||    
T  39936038 aattagagaaagttaatcccacccttaccttaaattagatgatcggactctacaaga 39935982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 20083766 - 20083638
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  20083766 tattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 20083667  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||  ||||||||||||    
T  20083666 tagagaaagttagtctcacccttacctta 20083638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 5761458 - 5761598
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | ||||| || ||||||||||||||||||||||||| |||||||| | |||||||    
T  5761458 tattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcaaaattatac-acttagaat 5761556  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcg 143  Q
    |||||||| ||||||| ||||||||||||  |||||||||||    
T  5761557 tagagaaagttagtcccacccttaccttaggttagatgatcg 5761598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 5082340 - 5082225
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||||||||||||||||||||||||| |||||||||| |||||||    
T  5082340 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcataattatacaacttagaat 5082241  T
Q  102 tagagaaatttagtcc 117  Q
    |||||||| |||||||    
T  5082240 tagagaaagttagtcc 5082225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 6101881 - 6101753
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| | ||||| || |||||||||||||||| ||||||||||||||||||| |||||||    
T  6101881 tattaacaaccaattataacttcaaaacctgattcccaaattcccataactacaacctacaacatgctaaacacaatttcagaattatacaacttagaat 6101782  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||| ||| ||||||||    
T  6101781 tagagaaagttagtcccacctttacctta 6101753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 6573184 - 6573060
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||| | ||||| || ||||||||||||||||||||||||| |||||||||| |||||||    
T  6573184 tattaacaaccaattacaacttcaaaacctcattcccaaattcccataactacaacctacaacatgctaaactcaatttcaaaattatacaacttagaat 6573085  T
Q  102 tagagaaatttagtccaacccttac 126  Q
    |||||||| ||||||  ||||||||    
T  6573084 tagagaaagttagtctcacccttac 6573060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 37292629 - 37292753
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||  | ||||| || ||||||||||||||||| ||||||||||||||||||  ||||||    
T  37292629 tattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgctaaacttaatttcagaattatacaacgtagaat 37292728  T
Q  102 tagagaaatttagtccaacccttac 126  Q
    |||||||| ||||||| ||||||||    
T  37292729 tagagaaagttagtcccacccttac 37292753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 6202700 - 6202824
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||  | ||||| || ||||||||||| ||| ||||||||||||||||||||  ||||||    
T  6202700 tattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgcaaaattcaatttcagaattatacaacgtagaat 6202799  T
Q  102 tagagaaatttagtccaacccttac 126  Q
    |||||||| ||||||  ||||||||    
T  6202800 tagagaaagttagtctcacccttac 6202824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 18761448 - 18761531
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||||||||| | ||||||||||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  18761448 tttcagaattataccacttagaattagagaaagttagtcgcacccttaccttaaattagatgatcggactctacaagattgctc 18761531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 20397580 - 20397510
Alignment:
Q  60 acaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| ||||||||||||    
T  20397580 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttaatcccacccttacctta 20397510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 22532256 - 22532132
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||| ||||||||||||  ||||||||||||||| || | ||||||| || |||| || || ||||  || ||||||||| |||||| |||||||||||    
T  22532256 aacaatcaattacaacttttaaacctaattcccaattttccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 22532157  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||| ||||||| ||||||||||||    
T  22532156 gaaagttagtcccacccttacctta 22532132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 22536941 - 22536817
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||| ||||||||||||  ||||||||||||||| || | ||||||| || |||| || || ||||  || ||||||||| |||||| |||||||||||    
T  22536941 aacaatcaattacaacttttaaacctaattcccaattttccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 22536842  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||| ||||||| ||||||||||||    
T  22536841 gaaagttagtcccacccttacctta 22536817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 20022155 - 20022027
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagag 106  Q
    ||||||||||||||||| ||||||||||||||||        |||| || ||||||| || |||| || |||| ||||||||||| | ||||||||||||    
T  20022155 caaccaattacaacttctaaacctaattcccaaa--------actacaacctacaacttgttaaattcgattttcagaattataccacttagaattagag 20022064  T
Q  107 aaatttagtccaacccttaccttaaattagatgatcg 143  Q
    ||| ||||||| |||||||||||| ||||||||||||    
T  20022063 aaagttagtcccacccttaccttagattagatgatcg 20022027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 31722616 - 31722493
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactc-aatttcagaattatacaaattagaattagag 106  Q
    ||||||||||||||||| ||||| |||| ||||||||| ||||||| || ||||||| || |||| || | ||||| |||||||| | ||||||||||||    
T  31722616 caaccaattacaacttctaaaccaaatttccaaattcccaaaactacaacctacaacttgttaaattcgattttcaaaattataccacttagaattagag 31722517  T
Q  107 aaatttagtccaacccttacctta 130  Q
    ||| ||||||| ||||||| ||||    
T  31722516 aaagttagtcccacccttatctta 31722493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 45469342 - 45469219
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagag 106  Q
    ||||||||||||||||| |||| |||||||||||||   ||||||| || ||||||| || |||| || |||| ||||||||||| | ||||||||||||    
T  45469342 caaccaattacaacttctaaacataattcccaaatttacaaaactataacctacaacttgttaaattcgattttcagaattataccacttagaattagag 45469243  T
Q  107 aaatttagtccaacccttacctta 130  Q
    ||| ||||||  ||||||||||||    
T  45469242 aaagttagtctcacccttacctta 45469219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 36727151 - 36727038
Alignment:
Q  18 caacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtc 116  Q
    ||||||| ||||||||||| ||||| |||||||||| || ||||||| || ||||  |||||| ||||||||||| | ||||||||||||||| ||||||    
T  36727151 caacttctaaacctaattctcaaatcccaaaaactacaacctacaacttgttaaatccaattttcagaattataccacttagaattagagaaagttagtc 36727052  T
Q  117 caacccttacctta 130  Q
      ||||||||||||    
T  36727051 tcacccttacctta 36727038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 4380669 - 4380604
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcg 143  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||  |||||||||||    
T  4380669 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaggttagatgatcg 4380604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 17906953 - 17906849
Alignment:
Q  26 aaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaaccctta 125  Q
    ||||||||||| ||||| || || |||| || ||||||| || ||||  || ||||||||| |||||| ||||||||||||||| ||||||| |||||||    
T  17906953 aaacctaattctcaaatccccaacactacaacctacaacttgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtcccaccctta 17906854  T
Q  126 cctta 130  Q
    |||||    
T  17906853 cctta 17906849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 22318033 - 22317911
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagag 106  Q
    ||||||||||||||||| |||||||| |||||||||||  |||||| || ||| ||| || |||| |||| ||||||||| |||| | |||||||||| |    
T  22318033 caaccaattacaacttctaaacctaaatcccaaattcccgaaactacaacctagaacctgttaaattcaattttcagaatcatac-acttagaattagtg 22317935  T
Q  107 aaatttagtccaacccttacctta 130  Q
    ||  ||||||| ||||||||||||    
T  22317934 aaggttagtcccacccttacctta 22317911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 39694400 - 39694298
Alignment:
Q  7 acaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagag 106  Q
    ||||| ||||||||| || || ||||||||||||||||| ||||||| || ||||||| || ||||  || ||||||||| |||||| ||| ||||||||    
T  39694400 acaactaattacaacgtctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaatccagtttcagaatcatacaacttataattagag 39694301  T
Q  107 aaa 109  Q
    |||    
T  39694300 aaa 39694298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 20178658 - 20178581
Alignment:
Q  2 tattaacaaccaatt-acaacttcaaaacctaattcccaaattccaaaaactaaaatctacaaca-tgctaaactcaa 77  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | ||||| || |||||||| ||||||||||||    
T  20178658 tattaacaaccaatttacaacttcaaaacctaattcccaaattctcataactacaacctacaacattgctaaactcaa 20178581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 23943866 - 23943795
Alignment:
Q  90 acaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||| |||||||||||||||  ||  || |||||||||||||||||||||| || |||||||||||||||||    
T  23943866 acaacttagaattagagaaagctatacccacccttaccttaaattagatgaccggactctacaagattgctc 23943795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 21579217 - 21579175
Alignment:
Q  119 acccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  21579217 acccttaccttaaattagatgatcggactctacaagattgctc 21579175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 22258353 - 22258275
Alignment:
Q  83 gaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||| | |  ||||||||||  |||||  ||||||||||||||||||||||||| || ||||||||||||||    
T  22258353 gaattatacaactcattattagagaaagctagtctcacccttaccttaaattagatgatcggacactacaagattgctc 22258275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 29762879 - 29762837
Alignment:
Q  119 acccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  29762879 acccttaccttaaattagatgatcggactctacaagattgctc 29762837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 36306019 - 36306080
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||  |||||  |||||||||||| |||||||||||| |||||||||||||||||    
T  36306019 attagagaaagctagtctcacccttaccttagattagatgatcggactctacaagattgctc 36306080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 18834444 - 18834503
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgc 159  Q
    ||||||||||  |||||| |||||||||||||||||||||||||  | ||||||||||||    
T  18834444 attagagaaagctagtcccacccttaccttaaattagatgatcgggcactacaagattgc 18834503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 22208269 - 22208352
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||   |  ||||||||||  |||||| |||||||||||| ||||||||||||  |||||| |||||||||    
T  22208269 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattagatgatcggtctctaccagattgctc 22208352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 12037183 - 12037133
Alignment:
Q  111 ttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||| |||||||||||| |||||||||||| ||||||| |||||||||    
T  12037183 ttagtcccacccttaccttatattagatgatcggactctacgagattgctc 12037133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 21514695 - 21514756
Alignment:
Q  82 agaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcg 143  Q
    |||||||||||| | |  ||||||||||| |||||| ||||||||||||| |||||||||||    
T  21514695 agaattatacaactcattattagagaaatctagtcccacccttaccttaagttagatgatcg 21514756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 23900100 - 23899987
Alignment:
Q  18 caacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatt-tcagaattatacaaattagaattagagaaatttagtc 116  Q
    ||||||| ||||||| ||| ||||| || ||||||| |  ||||||| || |||| |||||| ||||| |||||  | ||||||||||||||| ||||||    
T  23900100 caacttctaaacctagttctcaaatccccaaaactacagcctacaacttgttaaattcaattctcagagttatatcacttagaattagagaaagttagtc 23900001  T
Q  117 caacccttacctta 130  Q
      ||||||||||||    
T  23900000 acacccttacctta 23899987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 42265631 - 42265559
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt 80  Q
    |||||| || ||||||| || ||||||||||||||||| ||||||| || ||||||| || |||| |||||||    
T  42265631 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattt 42265559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 22583727 - 22583660
Alignment:
Q  63 acatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||| |||| ||||||||||||||||||||  |||||||| ||||  ||| ||| ||||||||||||    
T  22583727 acatgttaaattcaatttcagaattatacaacctagaattaaagaatgttaatcccacccttacctta 22583660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 23889784 - 23889851
Alignment:
Q  63 acatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||| |||| ||||||||||||||||||||  |||||||||||||| ||| ||  ||||||| ||||    
T  23889784 acatgttaaattcaatttcagaattatacaacctagaattagagaaagttaatctcacccttagctta 23889851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 36305837 - 36305908
Alignment:
Q  60 acaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaa 131  Q
    ||||||||||||||||||||||| ||||||||||  || ||||| ||||| ||| ||  |||||||| ||||    
T  36305837 acaacatgctaaactcaatttcataattatacaacctaaaattaaagaaagttaatcacacccttacgttaa 36305908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 23419443 - 23419493
Alignment:
Q  80 tcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||||||| ||||||||| ||||  ||||||| ||||||||||||    
T  23419443 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 23419493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 1485248 - 1485292
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  1485248 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 1485292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 4484126 - 4484170
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  4484126 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 4484170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 14408760 - 14408716
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  14408760 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 14408716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 14824622 - 14824666
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  14824622 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 14824666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 19700165 - 19700213
Alignment:
Q  82 agaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||||| ||||||||| ||||  ||||||| ||||||||||||    
T  19700165 agaattatacaacttagaattaaagaaggttagtcccacccttacctta 19700213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 20397630 - 20397590
Alignment:
Q  2 tattaacaacc-aattacaacttcaaaacctaattcccaaa 41  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  20397630 tattaacaacctaattacaactttaaaacctaattcccaaa 20397590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 22254766 - 22254818
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||||||  | ||||||||||||||| ||||||| ||| ||||||||    
T  22254766 tttcagaattataacacttagaattagagaaagttagtcccaccattacctta 22254818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 23948211 - 23948315
Alignment:
Q  27 aacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaaccctta 125  Q
    |||||||||| ||||| || ||||||| || ||||||| || ||||  || ||| |||||| |||||| ||||||||| ||||  ||||| | |||||||    
T  23948211 aacctaattctcaaatccccaaaactacaacctacaacttgttaaatccacttttcagaatcatacaacttagaattaaagaaggttagtaccaccctta 23948310  T
Q  126 cctta 130  Q
    |||||    
T  23948311 cctta 23948315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 26454708 - 26454760
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||| |  | ||||||||||||||| ||||||| ||||||||||||    
T  26454708 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 26454760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 21921 - 21762
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | || || || ||||||||||||||| |||||||||||| ||||||| |||||||    
T  21921 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataaatacaacctacaacatgctaaattcaatttcagaactatacaacttagaat 21822  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||    
T  21821 tagagaaatttagtcccaccattaccttaaattagatgatcggactctacaagattgctc 21762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 58670 - 58829
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | ||||| || |||||||||||||||||||||||||||||| ||||| |||||||    
T  58670 tattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaacatgctaaactcaatttcagaattgtacaacttagaat 58769  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  58770 tagagaaagttagtcccacccttaccttaatttagatgatcggactctacaagattgctc 58829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 78298 - 78154
Alignment:
Q  17 acaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtc 116  Q
    ||||||||||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  78298 acaacttcaaaacctaatttccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtc 78199  T
Q  117 caacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    | ||||||||||||||||||||||||| |||||||||||||||||    
T  78198 ccacccttaccttaaattagatgatcgtactctacaagattgctc 78154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 11402 - 11251
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | ||||| || |||||||||||||||||||||||||||| ||||||| |||||||    
T  11402 tattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaaatatacaacttagaat 11303  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaa 153  Q
    |||||||| ||||||  ||||||||||||||||||||||||| |||||||||    
T  11302 tagagaaagttagtctcacccttaccttaaattagatgatcggactctacaa 11251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 12661 - 12506
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||| |||||||||||||||||||||||||||||||| |||||||    
T  12661 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataacatgctaaactcaatttcagaattatacaacttagaat 12562  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||| ||| ||| |||||||||||  |||||||||||| |||||||||||||    
T  12561 tagagaaagttattcccacccttaccttggattagatgatcggactctacaagatt 12506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 5307 - 5432
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | ||||| || ||||||||||||||||| |||||||||||||||||| |||||||    
T  5307 tattaacaaccaattacgacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaacttaatttcagaattatacaacttagaat 5406  T
Q  102 tagagaaatttagtccaacccttacc 127  Q
    |||||||| ||||||| |||||||||    
T  5407 tagagaaagttagtcccacccttacc 5432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 104; Significance: 5e-52; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 24235 - 24100
Alignment:
Q  26 aaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaaccctta 125  Q
    |||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  24235 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaccctta 24136  T
Q  126 ccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||||||||||||| |||||||||||||||||    
T  24135 ccttaaattagatgatcggactctacaagattgctc 24100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 158631 - 158675
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  158631 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 158675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 21300172 - 21300017
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | |||||  | ||||||||||||||||| |||||||||||||||||| ||| |||    
T  21300172 tattaacaaccaattacaacttcaaaacctaattctcaaattcccataactactacctacaacatgctaaacttaatttcagaattatacaacttaaaat 21300073  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||| ||||||| |||||||||||| |||||||||||  |||||||||||||    
T  21300072 tagagaaagttagtcccacccttaccttagattagatgatcagactctacaagatt 21300017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 7484926 - 7485050
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||  | ||||| || ||||||||||||||||||||||||||||||||||||  ||||||    
T  7484926 tattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaacgtagaat 7485025  T
Q  102 tagagaaatttagtccaacccttac 126  Q
    |||||||| ||||||| ||||||||    
T  7485026 tagagaaagttagtcccacccttac 7485050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 19921562 - 19921727
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||| ||||| ||||||||||||||||||||||||| | | || || || |||||||||| ||||||||||||||||||||||||| |||||||    
T  19921562 tattaacaactaattataacttcaaaacctaattcccaaatttccataattacaacctacaacatgttaaactcaatttcagaattatacaacttagaat 19921661  T
Q  102 tagagaaatttag------tccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||  |||      ||| |||||||||||| ||||||||||||  |||||| |||||||||    
T  19921662 tagagaaaggtagtcccactcccacccttaccttagattagatgatcggtctctacgagattgctc 19921727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 20566478 - 20566598
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||| |        |||| || |||||||||||||||||||||||||||||||||||| || ||||    
T  20566478 tattaacaaccaattacaacttcaaaacctaattcccata--------actacaacctacaacatgctaaactcaatttcagaattatacaactttgaat 20566569  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||  ||||||||||||    
T  20566570 tagagaaagttagtctcacccttacctta 20566598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 31622049 - 31622178
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    ||||||||||||||||| ||||||||||||||||||||||||        || || | ||||||||||||||||||||||||||||||||||  || |||    
T  31622049 tattaacaaccaattacgacttcaaaacctaattcccaaatt--------tacaaacaacaacatgctaaactcaatttcagaattatacaacctaaaat 31622140  T
Q  102 tagagaaatttagtccaacccttaccttaaattagatg 139  Q
    |||||||| ||| ||| |||||||||||| ||||||||    
T  31622141 tagagaaagttaatcccacccttaccttagattagatg 31622178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 36508757 - 36508628
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||| |||| ||||||||||||| | ||||||| || |||| || || ||||  || ||||||||| |||||| |||||||||||    
T  36508757 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctaccacctgttaaatccattttcagaatcatacaacttagaattaga 36508658  T
Q  106 gaaatttagtccaacccttaccttaaatta 135  Q
    |||| ||||||  |||||||||||||||||    
T  36508657 gaaagttagtctcacccttaccttaaatta 36508628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 23199259 - 23199176
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||   |  ||||||||||  |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  23199259 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgatcggactctacaagattgctc 23199176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 21618047 - 21617928
Alignment:
Q  12 caattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttc-agaattatacaaattagaattagagaaat 110  Q
    ||||| ||||||| || |||||||| |||||||| ||||||| || ||||||| || |||| |||||||  ||| |||||  | |||||||||||||||     
T  21618047 caatttcaacttctaaccctaattctcaaattcccaaaactacaacctacaacttgttaaattcaatttttagagttatatcacttagaattagagaaag 21617948  T
Q  111 ttagtccaacccttacctta 130  Q
    ||||||| ||||||||||||    
T  21617947 ttagtcccacccttacctta 21617928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 31456888 - 31457012
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||| |||||||||| ||||||| | ||||||| || ||||    || ||||  || ||||||||| |||| | ||| |||||||    
T  31456888 aacaaccaattacaacttctaaacctaatttccaaatttccaaaactacaacctaccttgtgttaaatccagtttcagaatcataccacttaaaattaga 31456987  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||| ||||||  ||||||||||||    
T  31456988 gaaagttagtctcacccttacctta 31457012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 22111762 - 22111881
Alignment:
Q  12 caattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatt 111  Q
    ||||||| |||| |||||||||||| |||||||  |||   | || | ||||||||||||||||||||||| ||||||||||   | ||||||||||| |    
T  22111762 caattacgacttgaaaacctaattctcaaattcgcaaattcacaaacaacaacatgctaaactcaatttcaaaattatacaaccaaaaattagagaaagt 22111861  T
Q  112 tagtccaacccttaccttaa 131  Q
    || ||| |||||||| ||||    
T  22111862 taatcccacccttacgttaa 22111881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 21398674 - 21398613
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||  || ||| |||||||||||| |||||||||||| |||||||||||||||||    
T  21398674 attagagaaagctaatcccacccttaccttagattagatgatcggactctacaagattgctc 21398613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 6551342 - 6551290
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||||||||| ||||||||||||||| ||||||  ||||||||||||    
T  6551342 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 6551290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 31252011 - 31251931
Alignment:
Q  10 accaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattata 90  Q
    |||||||| |||||| ||||||||||| |||||||| ||||||| || ||| ||| || ||||  ||||||||||||||||    
T  31252011 accaattataacttctaaacctaattctcaaattcctaaaactacaacctataacctgttaaatccaatttcagaattata 31251931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 30138098 - 30138055
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaa 49  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||    
T  30138098 aacaaccaattacaacttctaaacctaattcccaatttccaaaa 30138055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 10774771 - 10774664
Alignment:
Q  22 ttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaac 120  Q
    |||||| |||||||||| |||||  ||||||| |||||||| |||| |||| ||||||| |||||| |||||  |||||||||| |||  ||||||| ||    
T  10774771 ttcaaaccctaattcccgaattcacaaaactacaatctaca-catgttaaattcaattttcagaatcatacac-ttagaattagtgaaggttagtcccac 10774674  T
Q  121 ccttacctta 130  Q
    ||||||||||    
T  10774673 ccttacctta 10774664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 20469281 - 20469176
Alignment:
Q  26 aaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaaccctt 124  Q
    ||||||||||| ||| | || ||||||| || ||||||| || ||||  |||||| |||| |||||  | ||||||||||||||| ||||||| ||||||    
T  20469281 aaacctaattctcaagtccccaaaactacaacctacaacttgttaaatccaattttcagagttatatcacttagaattagagaaagttagtcccaccctt 20469182  T
Q  125 acctta 130  Q
    ||||||    
T  20469181 acctta 20469176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 17876132 - 17876168
Alignment:
Q  7 acaaccaattacaacttcaaaacctaattcccaaatt 43  Q
    |||||||||||||||||| ||||||||||||||||||    
T  17876132 acaaccaattacaacttctaaacctaattcccaaatt 17876168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 266038 - 266091
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaa 131  Q
    ||||||||||| |  | ||||||||||||||| ||||||| |||||||||||||    
T  266038 tttcagaattaaattacttagaattagagaaagttagtcccacccttaccttaa 266091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 21405751 - 21405678
Alignment:
Q  8 caaccaattacaacttcaaaacctaa-ttcccaaattccaaaaactaaaatctacaacatgctaaactcaattt 80  Q
    ||||||||||||||||| || ||||| |||||||||||| ||||||| || | ||||| || |||| |||||||    
T  21405751 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacctgttaaattcaattt 21405678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 30616614 - 30616663
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacc 127  Q
    ||||||||| |||||| ||||||||||||||| | ||||| |||||||||    
T  30616614 tttcagaatcatacaacttagaattagagaaagtcagtcccacccttacc 30616663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 32607346 - 32607285
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||  |||||| |||||||||||| ||||||| ||||  |||||| |||||||||    
T  32607346 attagagaaagctagtcccacccttaccttagattagataatcggtctctacgagattgctc 32607285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 10954069 - 10954141
Alignment:
Q  58 ctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||| ||||  |||||||| ||||| |||| |||||||||  |||  ||||||| ||||||||||||    
T  10954069 ctacaacatgttaaatccaatttcataattacacaacttagaattaaggaaggttagtcccacccttacctta 10954141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 17011728 - 17011780
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||| |  | ||||||||||||||| ||||||| ||||||||||||    
T  17011728 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 17011780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 25249912 - 25249828
Alignment:
Q  47 aaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||| || |||||||||| ||||  |||||| |||||||||| || ||| ||||| ||||  ||||||| ||||||||||||    
T  25249912 aaaactataacctacaacatgttaaatccaattttcagaattatataacttaaaattaaagaaggttagtcctacccttacctta 25249828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 25313696 - 25313612
Alignment:
Q  47 aaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||| || |||||||||| ||||  |||||| |||||||||| || ||| ||||| ||||  ||||||| ||||||||||||    
T  25313696 aaaactataacctacaacatgttaaatccaattttcagaattatataacttaaaattaaagaaggttagtcctacccttacctta 25313612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 39245982 - 39246026
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  39245982 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 39246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 62 - 190
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||||| |||||||    
T  62 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgttaaactcaatttcagaattatacaacttagaat 161  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||| ||||||||||||    
T  162 tagagaaagttagtcccacccttacctta 190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 97; Significance: 7e-48; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 3106 - 3234
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||||||||| ||||| |||||||||||||||||||| |||||||    
T  3106 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatactaaagtcaatttcagaattatacaacttagaat 3205  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||||||||||||||||    
T  3206 tagagaaagttagtccaacccttacctta 3234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 2488 - 2558
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||    
T  2488 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaa 2558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 13520 - 13392
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||| || ||||    
T  13520 tattaacaaccaattataacttcaaaacctaattcccaaattcccaaaactacaacctacaacatgctaaactcaatttcagaattatacaacttggaat 13421  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||| ||||||||||||    
T  13420 tagagaaagttagtcccacccttacctta 13392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 143535 - 143667
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||| |||||||||||||  || ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  143535 tattaacaaccaattacaacttcaaaacataattcccaaattaaaataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 143634  T
Q  102 tagagaaatttagtccaacccttaccttaaatt 134  Q
    |||||||| ||||||  ||||||||||||||||    
T  143635 tagagaaagttagtcacacccttaccttaaatt 143667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 169127 - 168999
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||| |||||||| |||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  169127 tattaacaactaattacaagttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 169028  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||| |||| |||||||    
T  169027 tagagaaagttagtcccacccctacctta 168999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 78987 - 79132
Alignment:
Q  1 ttattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaa 100  Q
    |||||||||||||||||||||||||||||||||||||||            |||   |||||||||||||||||||||||||||||||||||| ||||||    
T  78987 ttattaacaaccaattacaacttcaaaacctaattccca------------taa---ctacaacatgctaaactcaatttcagaattatacaacttagaa 79071  T
Q  101 ttagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  79072 ttagagaaagttagtctcacccttaccttaaattagatgatcgaactctacaagattgctc 79132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 824 - 696
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||||| |||||||    
T  824 tattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgttaaactcaatttcagaattatacaacttagaat 725  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||| |||| |||||||    
T  724 tagagaaagttagtcccacccctacctta 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 89; Significance: 4e-43; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 29701 - 29573
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | ||||| || |||| ||||||||||||||||||||||||||||||| |||||||    
T  29701 tatttacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacgacatgctaaactcaatttcagaattatacaacttagaat 29602  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    || ||||| ||||||| ||||||||||||    
T  29601 tatagaaagttagtcccacccttacctta 29573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 21539 - 21663
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||| |||| ||||||||||||| | ||||||| || |||| |  || ||||  || |||| |||| |||||| |||||||||||    
T  21539 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaagctaccatctgttaaatccagtttctgaatcatacaacttagaattaga 21638  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    ||||  |||||| ||||||||||||    
T  21639 gaaagctagtcccacccttacctta 21663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 146647 - 146775
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||| ||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  146647 tattaacaaccaattataacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaat 146746  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    ||||| || ||||||| |||| |||||||    
T  146747 tagagtaagttagtcccacccatacctta 146775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 89; Significance: 4e-43; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 328418 - 328275
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaatt--aga 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| | | ||||| ||||| ||||||||||||||||||||||||||||||||| ||  |||    
T  328418 tattaacaaccaattacaacttcgaaacctaattcccaaatttccataactacaatcttcaacatgctaaactcaatttcagaattatacaacttagaga 328319  T
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcg 143  Q
    |||||||||| ||||||| ||||||||||||  |||||||||||    
T  328318 attagagaaagttagtcccacccttaccttaggttagatgatcg 328275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 75732 - 75839
Alignment:
Q  24 caaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaaccct 123  Q
    |||||||||||||||||||||  |||  || || | ||||||||||| ||||||||||||||||||||||  ||  |||||||||| ||| ||| |||||    
T  75732 caaaacctaattcccaaattcacaaatttacaaacaacaacatgctacactcaatttcagaattatacaacctaagattagagaaagttaatcccaccct 75831  T
Q  124 taccttaa 131  Q
    ||| ||||    
T  75832 tacgttaa 75839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 72868 - 72951
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaa 93  Q
    ||||||||||||||||||||||||||||||||||| |||||||     |||||   | ||||||| ||||||||||||| ||||||||||||    
T  72868 tattaacaaccaattacaacttcaaaacctaattcacaaattc-----actaa---caacaacatactaaactcaattttagaattatacaa 72951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 110121 - 110227
Alignment:
Q  26 aaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaaccctt 124  Q
    ||||||||| | ||||| || ||||||| || ||||||| || |||| ||||||| ||||||||||  | ||||||||||||||| ||||||  ||||||    
T  110121 aaacctaatcctcaaatccccaaaactacaacctacaacttgttaaattcaattttcagaattatatcacttagaattagagaaagttagtctcaccctt 110220  T
Q  125 accttaa 131  Q
    || ||||    
T  110221 acgttaa 110227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 35418 - 35542
Alignment:
Q  4 ttaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaatta 103  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||| |||||||||    
T  35418 ttaacaaccaattacgacttcaaaacctaattcccaaattcccaaaactaac--ctacaacatgctaaactcaatttcagaattatacaacttagaatta 35515  T
Q  104 gagaaatttagtccaacccttacctta 130  Q
    |||||| ||||||  ||||||||||||    
T  35516 gagaaagttagtctcacccttacctta 35542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 442 - 570
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||| ||||||||  | ||||| || ||||||||||||||||||||||||||||| |||||| |||||||    
T  442 tattaacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaacatgctaaactcaatttcagaatgatacaacttagaat 541  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| ||||||  ||||||||||||    
T  542 tagagaaagttagtctcacccttacctta 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 1089 - 1217
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| || ||| ||||||||||| |||||||||||||||||||| |||||||    
T  1089 tattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctaaaacatgctaaattcaatttcagaattatacaacttagaat 1188  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||  ||| ||||||  ||||||||||||    
T  1189 taggaaaagttagtcacacccttacctta 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 2526 - 2638
Alignment:
Q  49 aactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactc 148  Q
    ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| || ||||||||||||  |||    
T  2526 aactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccgtagattagatgatcggtctc 2625  T
Q  149 tacaagattgctc 161  Q
    ||| |||||||||    
T  2626 tacgagattgctc 2638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 16532 - 16650
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||| |||||||||| ||||||| | ||||||| || |||| ||||| ||||  || ||||||||| |||||| |||||||||||    
T  16532 aacaaccaattacaacttctaaacctaattgccaaatttccaaaactacaacctaccacatgttaaatccagtttcagaatcatacaacttagaattaga 16631  T
Q  106 gaaatttagtccaaccctt 124  Q
     ||||||||||| ||||||    
T  16632 taaatttagtcccaccctt 16650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 4830 - 4709
Alignment:
Q  10 accaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaa 108  Q
    |||||| |||||||| |||||||||| |||||||||| |||||  || ||||||| || |||| ||||||| ||||||||||| | ||||||||||||||    
T  4830 accaatgacaacttctaaacctaatttccaaattccacaaacttcaacctacaacttgttaaattcaattttcagaattatactacttagaattagagaa 4731  T
Q  109 atttagtccaacccttacctta 130  Q
    | ||||||| ||||||||||||    
T  4730 agttagtcccacccttacctta 4709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 6809 - 6688
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||| |||||||||||| ||||| | ||||||| || |||| || || ||||  || ||||||||| |||||| |||||||||||    
T  6809 aacaaccaattacaacttctaaacctaattcctaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 6710  T
Q  106 gaaatttagtccaacccttacc 127  Q
    |||| ||||||| |||||||||    
T  6709 gaaagttagtcccacccttacc 6688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 19685 - 19805
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||        | |  ||||||| ||||||||||||||| |||||||||||| |||||||    
T  19685 tattaacaaccaattacaacttaaaaacctaattcccaaattc--------acagcctacaacttgctaaactcaatttgagaattatacaacttagaat 19776  T
Q  102 tagagaaatttagtccaacccttacctta 130  Q
    |||||||| | ||||  ||||||||||||    
T  19777 tagagaaagtcagtctcacccttacctta 19805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 19207 - 19290
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||||||||||| ||||||||||||||| ||||||| |||||||| ||| ||||||| |||| |||||||||||||||||    
T  19207 tttcagaattatacaacttagaattagagaaagttagtcccacccttacgttagattagatcatcggactctacaagattgctc 19290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 17992 - 17913
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||||||||||| ||||||||||||||| ||||||| |||||||||||| |||||||||||| | |||||||||||    
T  17992 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcggattctacaagatt 17913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 56; Significance: 2e-23; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 113092 - 112966
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa--tttcagaattatacaaattagaatta 103  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| || || ||||||| || |||| ||||  ||||||| |||||  | |||||||||    
T  113092 aacaaccaattacaacttctaaacctaattcccaaattcccaaaattacaacctacaacttgttaaattcaatttttcagagttatatcacttagaatta 112993  T
Q  104 gagaaatttagtccaacccttacctta 130  Q
    |||||| ||||||| ||||||| ||||    
T  112992 gagaaagttagtcccacccttatctta 112966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 81501 - 81620
Alignment:
Q  12 caattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttc-agaattatacaaattagaattagagaaat 110  Q
    ||||||||||||| |||||||||||||||||||| ||||||| || ||||||| || |||| |||||||  ||||| || ||  |||||||||| |||      
T  81501 caattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaatttttagaatcatccat-ttagaattagtgaagg 81599  T
Q  111 ttagtccaacccttaccttaa 131  Q
    ||||||| |||||||||||||    
T  81600 ttagtcccacccttaccttaa 81620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 117925 - 117807
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa--tttcagaattatacaaattagaatta 103  Q
    ||||||||||||||||||| |||||||||||||        |||| || ||||| |||| || |||| ||||  ||||||| |||||  | |||||||||    
T  117925 aacaaccaattacaacttctaaacctaattccc--------aaaattacaatcttcaacttgttaaattcaatttttcagagttatatcacttagaatta 117834  T
Q  104 gagaaatttagtccaacccttacctta 130  Q
    |||||| ||||||| ||||||||||||    
T  117833 gagaaagttagtcccacccttacctta 117807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 1181 - 1045
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagag 106  Q
    |||| |||||||||||| || ||||| ||||||||||  ||||||  || ||||||| || |||| ||||||| ||||||||||  | ||||||| ||||    
T  1181 caactaattacaacttctaaccctaaatcccaaattctcaaaactccaacctacaacttgttaaattcaattttcagaattataacacttagaataagag 1082  T
Q  107 aaatttagtccaacccttaccttaaattagatgatcg 143  Q
    ||| ||||||| |||||||||||| ||||||||||||    
T  1081 aaagttagtcccacccttaccttagattagatgatcg 1045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 10877 - 10755
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||||| || ||||||||||||||||| ||| |||||  ||||||| || ||||  || ||||| ||| |||||| |||||||||||    
T  10877 aacaaccaattacaacttctaaccctaattcccaaattcccaaa-ctaaac-ctacaacctgttaaatccagtttcacaatcatacaacttagaattaga 10780  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||| ||||||| ||||||||||||    
T  10779 gaaagttagtcccacccttacctta 10755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 5097 - 5045
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||| ||| |||||| ||||||||||||||| ||||||| ||||||||||||    
T  5097 tttcacaatcatacaacttagaattagagaaagttagtcccacccttacctta 5045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 106175 - 106051
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattaga 105  Q
    |||||||||||||||| || |||||||||||||||||| | ||||||| | ||||| || || ||||  || |||| |||| |||||| |||||||||||    
T  106175 aacaaccaattacaacgtctaaacctaattcccaaatttccaaaactacagtctaccacctgttaaatccagtttccgaatcatacaacttagaattaga 106076  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||| ||||||  ||||||||||||    
T  106075 gaaagttagtcacacccttacctta 106051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 61900 - 61821
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||||||||||| ||||||||||||||| ||||||  |||||||||||| |||||||||||| | |||||||||||    
T  61900 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattagatgatcggattctacaagatt 61821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 51; Significance: 2e-20; HSPs: 6)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 19629 - 19759
Alignment:
Q  1 ttattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaa 100  Q
    |||||||||| |||||||||||||| |||||||||| |||||||  |||   | || | ||||||||||||||||||||||||||||||| ||  ||  |    
T  19629 ttattaacaatcaattacaacttcataacctaattctcaaattcacaaattcacaaacaacaacatgctaaactcaatttcagaattatataacctaaga 19728  T
Q  101 ttagagaaatttagtccaacccttaccttaa 131  Q
    ||||||||||||| ||| || ||||| ||||    
T  19729 ttagagaaatttaatcccacacttacgttaa 19759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 5194 - 5310
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||        | || | ||||||||| ||||||||||||||||||||||||  ||  ||    
T  5194 tattaacaaccaattacaacttcaaaacgtaattcccaaattc--------acaaacaacaacatgcaaaactcaatttcagaattatacaacctaagat 5285  T
Q  102 tagagaaatttagtccaacccttac 126  Q
    |||||||| ||| ||| ||||||||    
T  5286 tagagaaagttaatcccacccttac 5310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 11314 - 11430
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||        | || | ||||||||| ||||||||||||||||| ||||||  ||  ||    
T  11314 tattaacaaccaattacaacttcaaaacctaattcccaaattc--------acaaacaacaacatgcaaaactcaatttcagaatgatacaacctaagat 11405  T
Q  102 tagagaaatttagtccaacccttac 126  Q
    |||||||| ||| ||| ||||||||    
T  11406 tagagaaagttaatcccacccttac 11430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 5454 - 5537
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    |||||||||||||||| | |  ||||||||||  |||||| |||||||||||| |||||||||| |  |||||| |||||||||    
T  5454 tttcagaattatacaactcattattagagaaaggtagtcccacccttaccttagattagatgattggtctctacgagattgctc 5537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 19878 - 19939
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||| |||||| |||||||||||| ||||||||||||   ||||| |||||||||    
T  19878 attagagaaatctagtcctacccttaccttagattagatgatcggtttctacgagattgctc 19939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 11639 - 11699
Alignment:
Q  101 ttagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||  |||| | |||||||||    
T  11639 ttagagaaatttagtcccacccttatcttacattagatgatcggtctctgcgagattgctc 11699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 10741 - 10851
Alignment:
Q  13 aattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaattt 112  Q
    ||||||||||||||||||||||||||||||||  |||        | ||||||||||||||||||||||||||||||||||  || ||||||||||| ||    
T  10741 aattacaacttcaaaacctaattcccaaattcacaaa--------caacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagtt 10832  T
Q  113 agtccaacccttaccttaa 131  Q
    | ||| |||||||| ||||    
T  10833 aatcccacccttacattaa 10851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 10969 - 11030
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||  |||| | |||||||||||| |||||||||||  | |||||||||||||||    
T  10969 attagagaaagctagttccacccttaccttatattagatgatcagattctacaagattgctc 11030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 5633 - 5716
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||   |  ||||||||||  |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  5633 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgatcggactctacaagattgctc 5716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 2871 - 2941
Alignment:
Q  60 acaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||||| ||| ||| ||||||||||||    
T  2871 acaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttacctta 2941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 135625 - 135504
Alignment:
Q  9 aaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagaga 107  Q
    |||||||| ||||||| ||  |||||||||||||||| ||||||| || ||||||| || |||| |||| |||||||||||||| | |||||||||| ||    
T  135625 aaccaatttcaacttctaactctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaattatac-acttagaattagtga 135527  T
Q  108 aatttagtccaacccttacctta 130  Q
    |  ||||||| ||||||||||||    
T  135526 aggttagtcccacccttacctta 135504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 2252 - 2187
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcg 143  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||  |||||||||||    
T  2252 tttcagaattatacaacttagaattagagaaaattagtcccacccttaccttaggttagatgatcg 2187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 8571 - 8694
Alignment:
Q  8 caaccaattacaacttcaaaacctaatt-cccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattaga 105  Q
    ||||||||||||||||| || ||||||| |||||||||| ||||||| || ||||||| || |||| |||| ||||||||| |||| | ||||||||||     
T  8571 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagt 8669  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||  ||||||| ||||||||||||    
T  8670 gaaggttagtcccacccttacctta 8694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 7205 - 7329
Alignment:
Q  8 caaccaattacaacttcaaaacctaattc-ccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattaga 105  Q
    ||||||||||||||||| || |||||||  ||||||||| ||||||| || ||||||||||  |||  |||||| ||||||||||||| ||||||||| |    
T  7205 caaccaattacaacttctaaccctaattttccaaattcccaaaactataacctacaacatgtcaaatccaattttcagaattatacaacttagaattaaa 7304  T
Q  106 gaaatttagtccaacccttacctta 130  Q
    |||  ||||||| ||||| ||||||    
T  7305 gaatgttagtcccaccctcacctta 7329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 126407 - 126305
Alignment:
Q  27 aacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaacccttac 126  Q
    |||||||||| ||||| |  ||||||| |||||||||| || ||||  |||||||||||| |||||| ||||||||||||||| ||||||| | ||||||    
T  126407 aacctaattctcaaatcctcaaaactacaatctacaacttgttaaatccaatttcagaatcatacaacttagaattagagaaagttagtccca-ccttac 126309  T
Q  127 ctta 130  Q
    ||||    
T  126308 ctta 126305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 3174 - 3053
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagag 106  Q
    ||||||||||||||||| || ||||||||| ||||||| ||||||| || ||||||| || |||| |||| ||||||||| |||| | |||||||||  |    
T  3174 caaccaattacaacttctaaccctaattcctaaattcccaaaactacaacctacaacttgttaaattcaattttcagaataatac-acttagaattattg 3076  T
Q  107 aaatttagtccaacccttacctt 129  Q
    ||  ||||||| |||||||||||    
T  3075 aaggttagtcccacccttacctt 3053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 135059 - 135103
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  135059 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 135103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 137528 - 137572
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  137528 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 137572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 139997 - 140041
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  139997 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 140041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 142466 - 142510
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  142466 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 142510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 144935 - 144979
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  144935 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 144979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 67060 - 67173
Alignment:
Q  18 caacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtc 116  Q
    ||||||| |||||| ||||||||||||| ||||||| || ||||||  || ||||  |||||| ||||||||||| | || |||||||||||| ||||||    
T  67060 caacttctaaaccttattcccaaattcctaaaactacaacctacaatttgttaaatccaattttcagaattataccacttcgaattagagaaagttagtc 67159  T
Q  117 caacccttacctta 130  Q
    | ||| ||||||||    
T  67160 ccacctttacctta 67173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 2143 - 2071
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt 80  Q
    ||||||||||||||||  |||||||||||||||||| | ||||||| || |||||||||| |||| |||||||    
T  2143 caaccaattacaacttataaacctaattcccaaatttccaaaactacaacctacaacatgttaaattcaattt 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 2506 - 2423
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||||||||   |  ||||||||||  |||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  2506 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaattagatgttcggactttacaagattgctc 2423  T

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Target: scaffold0256 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 1917 - 1855
Alignment:
Q  60 acaacatgctaaactcaatttcagaattatacaaattagaattagagaaatttagtccaaccc 122  Q
    |||||||| |||| |||||||||||||||||| | ||||||||||||||| ||||||| ||||    
T  1917 acaacatgttaaattcaatttcagaattataccacttagaattagagaaagttagtcccaccc 1855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 20202 - 20086
Alignment:
Q  13 aattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaa-tttcagaattatacaaattagaattagagaaatt 111  Q
    |||||||||||| |||| |||||||||||||||  |||||| || ||||||| || |||| |||| |||||||||||||| | |||||||||| |||  |    
T  20202 aattacaacttctaaacataattcccaaattcc-caaactataacctacaacctgttaaattcaattttcagaattatac-acttagaattagtgaaggt 20105  T
Q  112 tagtccaacccttacctta 130  Q
    ||||||  |||||||||||    
T  20104 tagtcccgcccttacctta 20086  T

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Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 13571 - 13525
Alignment:
Q  111 ttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  13571 ttagtcccacccttaccttaaattagatgatcggactctacaagatt 13525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 5353 - 5292
Alignment:
Q  82 agaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcg 143  Q
    |||||||||||| ||| ||||||||||| ||||||| ||||||||||||  |||||||||||    
T  5353 agaattatacaacttaaaattagagaaagttagtcccacccttaccttaggttagatgatcg 5292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 18670 - 18613
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    ||||||||||  |||||| |||||||||||| |||||||||||| |||||||||||||    
T  18670 attagagaaagctagtcccacccttaccttagattagatgatcggactctacaagatt 18613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 18764 - 18731
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaa 41  Q
    ||||||||||||||||| ||||||||||||||||    
T  18764 caaccaattacaacttctaaacctaattcccaaa 18731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 23922 - 23861
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||||||  |||||  ||||||||||| ||||||||||||| |||||||||||||||||    
T  23922 attagagaaagctagtctcacccttaccttgaattagatgatcggactctacaagattgctc 23861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 5761 - 5712
Alignment:
Q  76 aatttcagaattatacaaattagaattagagaaatttagtccaaccctta 125  Q
    |||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  5761 aatttcagaattatacaacttagaattagagaaagttagtcccaccctta 5712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 12323 - 12403
Alignment:
Q  7 acaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaa-catgctaaactcaatttcagaat 86  Q
    |||||| ||||||||||| ||||||||||| |||||| | ||||||| || |||||| |||| |||| |||||||||||||    
T  12323 acaacctattacaacttctaaacctaattctcaaatttccaaaactacaacctacaaccatgttaaattcaatttcagaat 12403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 60843 - 60947
Alignment:
Q  27 aacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatt-tcagaattatacaaattagaattagagaaatttagtccaaccctta 125  Q
    |||||||||| ||||| |  ||||||| || |||||||||| |||| |||||| |||||||||||||| ||||||||| ||||  ||||||  | |||||    
T  60843 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaattcaattctcagaattatacaacttagaattaaagaaggttagtctcatcctta 60942  T
Q  126 cctta 130  Q
    |||||    
T  60943 cctta 60947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 15272 - 15324
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||| |||||| ||||||||||||||| ||||||| ||||||||||||    
T  15272 tttcagaataatacaacttagaattagagaaagttagtcccacccttacctta 15324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 9004 - 9070
Alignment:
Q  22 ttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaatta 88  Q
    |||||| ||||||||||||||||||||||||| || ||||||| || ||||  || |||||||||||    
T  9004 ttcaaaccctaattcccaaattccaaaaactacaacctacaacctgttaaatccagtttcagaatta 9070  T

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Target: scaffold0819 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 5311 - 5418
Alignment:
Q  22 ttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattagaattagagaaatttagtccaac 120  Q
    |||||| |||||||||| |||||  ||||||| |||||||| |||| |||| ||||||| |||||| |||||  |||||||||| |||  ||||||| ||    
T  5311 ttcaaaccctaattcccgaattcacaaaactacaatctaca-catgttaaattcaattttcagaatcatacac-ttagaattagtgaaggttagtcccac 5408  T
Q  121 ccttacctta 130  Q
    ||||||||||    
T  5409 ccttacctta 5418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 6661 - 6620
Alignment:
Q  2 tattaacaaccaattacaacttcaaaacctaattcccaaatt 43  Q
    ||||||||||||||||| || |||||||||||||||||||||    
T  6661 tattaacaaccaattacgacatcaaaacctaattcccaaatt 6620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 26756 - 26638
Alignment:
Q  2 tattaacaaccaa-ttacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaattt-cagaattatacaaattaga 99  Q
    ||||||||||||| |||| | |||||||||||||||||||||||  |||        | ||||||||||||||||||||| |||||||||||||  || |    
T  26756 tattaacaaccaaattactaattcaaaacctaattcccaaattcacaaa--------caacaacatgctaaactcaattttcagaattatacaacctaaa 26665  T
Q  100 attagagaaatttagtccaacccttac 126  Q
    |||| ||||| ||| ||| ||||||||    
T  26664 attaaagaaagttaatcccacccttac 26638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 4612 - 4696
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatttcagaattataca 92  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||| | || ||| ||| || |||| ||||||| ||||| |||||    
T  4612 caactaattacaacttctaaacctaattctcaaattcccaaaaccacaacctaaaacctgttaaattcaattttagaatcataca 4696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 19954 - 20006
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||||||  | ||||||||||||||| ||||||| ||||||||||||    
T  19954 tttcagaattataacacttagaattagagaaagttagtcccacccttacctta 20006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 13878 - 13911
Alignment:
Q  8 caaccaattacaacttcaaaacctaattcccaaa 41  Q
    ||||||||||||||||| ||||||||||||||||    
T  13878 caaccaattacaacttctaaacctaattcccaaa 13911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 2881 - 2960
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagatt 157  Q
    ||||||||||||||||   |  ||||||||||  |||||| |||||||||||| |||| ||||||  |||||||||||||    
T  2881 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattaaatgatcagactctacaagatt 2960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 165 - 208
Alignment:
Q  6 aacaaccaattacaacttcaaaacctaattcccaaattccaaaa 49  Q
    ||||||||||||||||||| |||||||||| |||| ||||||||    
T  165 aacaaccaattacaacttctaaacctaatttccaatttccaaaa 208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 4942 - 4992
Alignment:
Q  80 tcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||||||| ||||||||| ||||  ||||||| ||||||||||||    
T  4942 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 4992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 28584 - 28634
Alignment:
Q  111 ttagtccaacccttaccttaaattagatgatcgaactctacaagattgctc 161  Q
    ||||||| || ||||||||| |||||||||| | |||||||||||||||||    
T  28584 ttagtcccactcttaccttagattagatgataggactctacaagattgctc 28634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 11194 - 11232
Alignment:
Q  119 acccttaccttaaattagatgatcgaactctacaagatt 157  Q
    |||||||||||| |||||||||||| |||||||||||||    
T  11194 acccttaccttagattagatgatcggactctacaagatt 11232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 158949 - 158888
Alignment:
Q  3 attaacaaccaattacaacttcaaaacctaattcccaaattccaaaaactaaaatctacaac 64  Q
    |||| |||||| || ||||||| || ||||||||||||||||| ||||||| || |||||||    
T  158949 attatcaaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaac 158888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 398541 - 398614
Alignment:
Q  58 ctacaacatgctaaactcaatt-tcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    |||||||||| ||||  ||||| ||||||||||||||  |||||||| ||||  ||||||| ||||||||||||    
T  398541 ctacaacatgttaaatccaattctcagaattatacaacctagaattaaagaaggttagtcccacccttacctta 398614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 231 - 195
Alignment:
Q  95 ttagaattagagaaatttagtccaacccttaccttaa 131  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  231 ttagaattagagaaagttagtcccacccttaccttaa 195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 4333 - 4437
Alignment:
Q  27 aacctaattcccaaattccaaaaactaaaatctacaacatgctaaactcaatt-tcagaattatacaaattagaattagagaaatttagtccaaccctta 125  Q
    |||||||||| ||||| |  ||||||| || |||||||||| ||||  || || |||||||||||||| ||||||||| ||||  ||||||| | | |||    
T  4333 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaatccagttctcagaattatacaacttagaattaaagaaggttagtcccatcgtta 4432  T
Q  126 cctta 130  Q
    |||||    
T  4433 cctta 4437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 5029 - 5081
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||| |  | ||||||||||||||| ||||||| ||||||||||||    
T  5029 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 8960 - 9012
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||| |  | ||||||||||||||| ||||||| ||||||||||||    
T  8960 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 9012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 11190 - 11130
Alignment:
Q  100 attagagaaatttagtccaacccttaccttaaattagatgatcgaactctacaagattgct 160  Q
    ||||||||||  |||||| | |||||||||||||||| |||||| || ||| |||||||||    
T  11190 attagagaaagctagtcccatccttaccttaaattaggtgatcggacactaaaagattgct 11130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 5029 - 5081
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||| |  | ||||||||||||||| ||||||| ||||||||||||    
T  5029 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 19119 - 19163
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  19119 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 19163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 21097 - 21149
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||| |  | ||||||||||||||| ||||||| ||||||||||||    
T  21097 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 21149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 34112 - 34164
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||| |  | ||||||||||||||| ||||||| ||||||||||||    
T  34112 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 34164  T

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Target: scaffold0134 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 38668 - 38712
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  38668 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 38712  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 69905 - 69853
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||||| |  | ||||||||||||||| ||||||| ||||||||||||    
T  69905 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 69853  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 29388 - 29440
Alignment:
Q  78 tttcagaattatacaaattagaattagagaaatttagtccaacccttacctta 130  Q
    ||||||||| |||||| ||||||||| ||||  ||||||| ||||||||||||    
T  29388 tttcagaatcatacaacttagaattaaagaagattagtcccacccttacctta 29440  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 56322 - 56278
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  56322 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 56278  T

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Target: scaffold0023 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 95257 - 95301
Alignment:
Q  29 cctaattcccaaattc-caaaaactaaaatctacaacatgctaaa 72  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||    
T  95257 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaa 95301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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