View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5654_low_33 (Length: 212)

Name: NF5654_low_33
Description: NF5654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5654_low_33
NF5654_low_33
[»] chr3 (39 HSPs)
chr3 (31-77)||(49088752-49088798)
chr3 (31-76)||(51505874-51505919)
chr3 (30-78)||(5428450-5428498)
chr3 (30-74)||(39100098-39100142)
chr3 (31-77)||(20370296-20370342)
chr3 (35-77)||(51379798-51379840)
chr3 (30-71)||(38894043-38894084)
chr3 (39-76)||(38911173-38911210)
chr3 (30-71)||(52575953-52575994)
chr3 (31-78)||(7202931-7202978)
chr3 (30-77)||(7824807-7824854)
chr3 (18-77)||(14827525-14827584)
chr3 (30-77)||(21506772-21506819)
chr3 (30-77)||(22722402-22722449)
chr3 (30-77)||(25340938-25340985)
chr3 (30-77)||(28244118-28244165)
chr3 (30-77)||(32629080-32629127)
chr3 (30-77)||(33745099-33745146)
chr3 (30-77)||(43345021-43345068)
chr3 (30-77)||(43490431-43490478)
chr3 (30-77)||(44579636-44579683)
chr3 (29-71)||(46090216-46090259)
chr3 (23-77)||(12976609-12976663)
chr3 (23-77)||(30229533-30229587)
chr3 (31-77)||(33223868-33223914)
chr3 (22-64)||(39552477-39552519)
chr3 (30-76)||(49710721-49710767)
chr3 (31-77)||(53162198-53162244)
chr3 (26-71)||(4216409-4216454)
chr3 (23-67)||(12101555-12101600)
chr3 (30-79)||(13800665-13800714)
chr3 (29-77)||(43316613-43316662)
chr3 (31-72)||(47787736-47787777)
chr3 (31-76)||(50570204-50570249)
chr3 (31-71)||(17507714-17507754)
chr3 (34-74)||(47185822-47185862)
chr3 (30-78)||(53996298-53996346)
chr3 (30-77)||(54113340-54113388)
chr3 (29-72)||(54203844-54203888)
[»] chr1 (37 HSPs)
chr1 (31-78)||(3393583-3393630)
chr1 (30-77)||(29233988-29234035)
chr1 (18-78)||(17917140-17917200)
chr1 (30-77)||(7158773-7158820)
chr1 (30-77)||(45701328-45701375)
chr1 (23-77)||(7550896-7550950)
chr1 (32-77)||(44641527-44641572)
chr1 (30-78)||(25086482-25086530)
chr1 (30-78)||(34521204-34521252)
chr1 (18-77)||(39452460-39452520)
chr1 (30-77)||(3528483-3528530)
chr1 (30-77)||(16826354-16826401)
chr1 (30-77)||(31401667-31401714)
chr1 (30-77)||(32950775-32950822)
chr1 (30-77)||(41032931-41032978)
chr1 (30-77)||(42888575-42888622)
chr1 (31-78)||(48100721-48100768)
chr1 (30-77)||(52441525-52441572)
chr1 (30-71)||(15549250-15549292)
chr1 (33-71)||(24506930-24506968)
chr1 (29-74)||(39879238-39879284)
chr1 (31-77)||(48681948-48681994)
chr1 (34-71)||(13779584-13779621)
chr1 (30-67)||(32962573-32962610)
chr1 (32-77)||(34877671-34877716)
chr1 (31-72)||(36228572-36228613)
chr1 (38-71)||(50372383-50372416)
chr1 (31-71)||(5503780-5503820)
chr1 (30-78)||(12213992-12214040)
chr1 (30-78)||(15382833-15382881)
chr1 (37-77)||(26834520-26834560)
chr1 (30-78)||(28832185-28832233)
chr1 (31-74)||(43119214-43119258)
chr1 (30-78)||(43545864-43545912)
chr1 (37-77)||(43840346-43840386)
chr1 (30-78)||(49868010-49868058)
chr1 (33-77)||(50595900-50595944)
[»] chr2 (33 HSPs)
chr2 (31-76)||(16221361-16221406)
chr2 (33-78)||(30762512-30762557)
chr2 (30-78)||(29734690-29734738)
chr2 (30-77)||(23718935-23718982)
chr2 (30-77)||(24106607-24106654)
chr2 (30-77)||(25186256-25186303)
chr2 (30-77)||(42475124-42475171)
chr2 (32-78)||(37119274-37119320)
chr2 (33-74)||(29133501-29133542)
chr2 (31-71)||(6228640-6228680)
chr2 (31-71)||(23756718-23756758)
chr2 (30-78)||(41859851-41859899)
chr2 (38-77)||(7121782-7121821)
chr2 (30-77)||(33063986-33064033)
chr2 (30-77)||(39761438-39761485)
chr2 (31-74)||(41672299-41672342)
chr2 (30-76)||(18782554-18782600)
chr2 (31-77)||(19967418-19967464)
chr2 (31-77)||(24305320-24305366)
chr2 (31-77)||(29896309-29896355)
chr2 (30-76)||(32901382-32901428)
chr2 (30-71)||(7302155-7302196)
chr2 (34-71)||(22571883-22571920)
chr2 (30-71)||(36474768-36474809)
chr2 (23-71)||(3113734-3113782)
chr2 (37-77)||(17736793-17736833)
chr2 (31-67)||(19159951-19159987)
chr2 (30-77)||(19976153-19976201)
chr2 (31-71)||(24581032-24581072)
chr2 (33-77)||(34464426-34464470)
chr2 (17-77)||(35287665-35287725)
chr2 (37-77)||(35327356-35327396)
chr2 (30-78)||(40853832-40853880)
[»] chr5 (26 HSPs)
chr5 (30-78)||(18489090-18489138)
chr5 (30-71)||(9893685-9893726)
chr5 (17-78)||(10704332-10704393)
chr5 (29-71)||(2530016-2530059)
chr5 (29-71)||(8314759-8314802)
chr5 (29-71)||(16166388-16166431)
chr5 (18-77)||(18589869-18589928)
chr5 (30-77)||(28207132-28207179)
chr5 (30-77)||(32760510-32760557)
chr5 (31-77)||(7713532-7713578)
chr5 (31-77)||(16193107-16193153)
chr5 (30-72)||(25709738-25709780)
chr5 (31-77)||(27903113-27903159)
chr5 (29-74)||(29382675-29382721)
chr5 (31-77)||(42659577-42659623)
chr5 (31-76)||(25385053-25385098)
chr5 (31-76)||(29962359-29962404)
chr5 (31-76)||(30012394-30012439)
chr5 (44-76)||(12909094-12909126)
chr5 (30-74)||(13409553-13409597)
chr5 (31-67)||(17708084-17708120)
chr5 (30-78)||(18331706-18331754)
chr5 (31-71)||(18789042-18789082)
chr5 (33-77)||(22619874-22619918)
chr5 (31-71)||(31602840-31602880)
chr5 (37-77)||(33584084-33584124)
[»] chr4 (46 HSPs)
chr4 (33-77)||(12671765-12671809)
chr4 (30-77)||(35287521-35287568)
chr4 (30-77)||(54857629-54857676)
chr4 (31-77)||(27740740-27740786)
chr4 (31-77)||(39171385-39171431)
chr4 (31-77)||(43374287-43374333)
chr4 (34-71)||(42198594-42198631)
chr4 (30-78)||(3936626-3936674)
chr4 (18-74)||(16304100-16304156)
chr4 (32-72)||(19347335-19347375)
chr4 (30-78)||(19479491-19479539)
chr4 (29-77)||(19935174-19935222)
chr4 (31-75)||(22040652-22040696)
chr4 (30-78)||(28031811-28031859)
chr4 (30-77)||(7030907-7030954)
chr4 (30-77)||(9946427-9946474)
chr4 (30-77)||(14079252-14079298)
chr4 (30-77)||(18903772-18903819)
chr4 (31-78)||(28435263-28435310)
chr4 (29-71)||(29099722-29099765)
chr4 (34-77)||(32180830-32180873)
chr4 (30-77)||(36662383-36662430)
chr4 (29-71)||(52620570-52620613)
chr4 (30-77)||(56564997-56565044)
chr4 (31-77)||(2430997-2431043)
chr4 (30-71)||(8151136-8151178)
chr4 (29-74)||(18138265-18138311)
chr4 (30-76)||(20403182-20403228)
chr4 (31-77)||(35021482-35021528)
chr4 (29-74)||(49125474-49125520)
chr4 (31-77)||(51002287-51002333)
chr4 (30-71)||(241398-241439)
chr4 (23-76)||(7291635-7291688)
chr4 (30-71)||(16431622-16431663)
chr4 (30-79)||(20383486-20383535)
chr4 (30-71)||(27655737-27655778)
chr4 (38-71)||(35151463-35151496)
chr4 (31-72)||(48251923-48251964)
chr4 (30-78)||(6087746-6087794)
chr4 (33-77)||(9913899-9913943)
chr4 (31-71)||(16584964-16585004)
chr4 (33-77)||(23154594-23154638)
chr4 (30-78)||(31780744-31780792)
chr4 (30-78)||(34247439-34247487)
chr4 (30-78)||(49021765-49021813)
chr4 (30-78)||(51458677-51458725)
[»] chr8 (44 HSPs)
chr8 (33-76)||(17002356-17002399)
chr8 (34-77)||(37750017-37750060)
chr8 (30-77)||(39433410-39433457)
chr8 (31-77)||(14279586-14279632)
chr8 (30-76)||(29652219-29652265)
chr8 (17-70)||(2297346-2297399)
chr8 (30-78)||(574383-574431)
chr8 (30-78)||(2554226-2554274)
chr8 (30-77)||(15310322-15310370)
chr8 (30-77)||(15490691-15490739)
chr8 (37-77)||(26885659-26885699)
chr8 (30-77)||(34997458-34997506)
chr8 (30-74)||(43778022-43778066)
chr8 (30-77)||(1877676-1877723)
chr8 (34-77)||(5325525-5325568)
chr8 (30-77)||(6314337-6314384)
chr8 (31-70)||(11479652-11479691)
chr8 (28-71)||(24687785-24687828)
chr8 (30-77)||(27718908-27718955)
chr8 (29-71)||(40048769-40048812)
chr8 (23-77)||(1644680-1644734)
chr8 (31-77)||(8717490-8717536)
chr8 (31-77)||(8828172-8828218)
chr8 (31-77)||(10152456-10152502)
chr8 (27-77)||(14975874-14975924)
chr8 (31-77)||(20469326-20469372)
chr8 (17-71)||(24195255-24195309)
chr8 (31-77)||(32555254-32555300)
chr8 (29-74)||(35004199-35004245)
chr8 (29-74)||(39525381-39525427)
chr8 (30-71)||(5251018-5251059)
chr8 (31-76)||(26991772-26991817)
chr8 (30-78)||(943096-943144)
chr8 (33-77)||(1764971-1765015)
chr8 (31-67)||(5155578-5155614)
chr8 (18-78)||(6235553-6235613)
chr8 (30-78)||(6248300-6248348)
chr8 (30-78)||(12910820-12910868)
chr8 (33-77)||(13286131-13286175)
chr8 (30-78)||(24338218-24338266)
chr8 (30-78)||(30427730-30427778)
chr8 (17-77)||(30694440-30694500)
chr8 (30-74)||(40919373-40919417)
chr8 (30-77)||(44654994-44655042)
[»] chr7 (34 HSPs)
chr7 (18-77)||(5458073-5458132)
chr7 (29-74)||(4406725-4406771)
chr7 (29-74)||(5483333-5483379)
chr7 (31-77)||(13955480-13955526)
chr7 (33-77)||(25246771-25246815)
chr7 (30-77)||(19416514-19416561)
chr7 (30-77)||(19578151-19578198)
chr7 (34-77)||(23198767-23198810)
chr7 (30-77)||(27993043-27993090)
chr7 (34-77)||(29734808-29734851)
chr7 (31-77)||(34807218-34807265)
chr7 (30-77)||(44558788-44558835)
chr7 (34-77)||(46207760-46207803)
chr7 (34-77)||(47589571-47589614)
chr7 (29-70)||(21134452-21134494)
chr7 (33-75)||(37307891-37307933)
chr7 (30-76)||(41250061-41250107)
chr7 (31-68)||(1311817-1311854)
chr7 (33-78)||(3672569-3672614)
chr7 (26-71)||(24027069-24027114)
chr7 (37-77)||(1261175-1261215)
chr7 (33-77)||(1285086-1285130)
chr7 (33-77)||(3948054-3948098)
chr7 (33-77)||(8683070-8683114)
chr7 (31-71)||(9522918-9522958)
chr7 (30-70)||(25288671-25288711)
chr7 (41-77)||(30781452-30781488)
chr7 (18-78)||(31281767-31281827)
chr7 (29-76)||(35444192-35444240)
chr7 (30-78)||(43539118-43539166)
chr7 (29-64)||(44651978-44652014)
chr7 (31-79)||(45425451-45425499)
chr7 (31-71)||(47342683-47342723)
chr7 (17-77)||(48069838-48069898)
[»] chr6 (21 HSPs)
chr6 (31-77)||(14350949-14350995)
chr6 (30-77)||(6833478-6833526)
chr6 (30-77)||(1918472-1918519)
chr6 (30-77)||(4450262-4450309)
chr6 (30-77)||(13496116-13496163)
chr6 (30-77)||(21373420-21373467)
chr6 (31-69)||(24162727-24162766)
chr6 (31-78)||(24623332-24623379)
chr6 (30-77)||(26320577-26320624)
chr6 (23-77)||(4494878-4494932)
chr6 (29-74)||(6018672-6018718)
chr6 (31-77)||(9444957-9445003)
chr6 (31-77)||(12904332-12904378)
chr6 (31-77)||(32193874-32193920)
chr6 (31-77)||(33938694-33938740)
chr6 (30-71)||(334146-334187)
chr6 (18-67)||(14772984-14773033)
chr6 (30-79)||(21936047-21936096)
chr6 (30-78)||(655763-655811)
chr6 (33-77)||(8809306-8809350)
chr6 (30-78)||(12700435-12700483)
[»] scaffold0768 (1 HSPs)
scaffold0768 (30-77)||(6402-6450)
[»] scaffold0735 (1 HSPs)
scaffold0735 (30-77)||(1528-1575)
[»] scaffold0188 (1 HSPs)
scaffold0188 (18-77)||(28115-28174)
[»] scaffold0160 (1 HSPs)
scaffold0160 (30-77)||(22911-22958)
[»] scaffold0154 (2 HSPs)
scaffold0154 (30-77)||(37535-37582)
scaffold0154 (31-77)||(10772-10818)
[»] scaffold0031 (1 HSPs)
scaffold0031 (30-77)||(47255-47302)
[»] scaffold0197 (1 HSPs)
scaffold0197 (31-77)||(21770-21816)
[»] scaffold0122 (1 HSPs)
scaffold0122 (31-77)||(14201-14247)
[»] scaffold0334 (1 HSPs)
scaffold0334 (30-78)||(5181-5229)
[»] scaffold0259 (1 HSPs)
scaffold0259 (30-74)||(5416-5460)
[»] scaffold0011 (1 HSPs)
scaffold0011 (33-77)||(185263-185307)


Alignment Details
Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 49088798 - 49088752
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  49088798 accttacatattttatgcattgtttatatcaactgagctaaactcac 49088752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 51505919 - 51505874
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    
T  51505919 accttgcatattttatgcattgtccatatcaactgagctaaactca 51505874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 5428450 - 5428498
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  5428450 gaccttgcatatattatgcattgtttttatcaattgagctaaactcaca 5428498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 39100098 - 39100142
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaact 74  Q
    |||||||||||| |||||||||||||||| |||||||||||||||    
T  39100098 gaccttgcatatattatgcattgtttataacaactgagctaaact 39100142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 20370296 - 20370342
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||    
T  20370296 accttgcatattttatgcattgtccatatcaactgagctaagctcac 20370342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 51379798 - 51379840
Alignment:
Q  35 tgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||| |||||||||||| |||||||||    
T  51379798 tgcatattttatgcattgttcatatcaactgaggtaaactcac 51379840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 38894084 - 38894043
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  38894084 gaccttgcatattttatacattgttcatatcaactgagctaa 38894043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 38911210 - 38911173
Alignment:
Q  39 tattttatgcattgtttatatcaactgagctaaactca 76  Q
    |||||||||||||||||||||||| |||||||||||||    
T  38911210 tattttatgcattgtttatatcaattgagctaaactca 38911173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 52575994 - 52575953
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||||||||||||||| ||| ||||||||||||    
T  52575994 gaccttgcatattttatgcattgttcataccaactgagctaa 52575953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 7202931 - 7202978
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    ||||||||||||||||||||||||   | |||||||||||||||||||    
T  7202931 accttgcatattttatgcattgttccaaccaactgagctaaactcaca 7202978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 7824854 - 7824807
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| ||||| ||||| ||||||||||||| |||||||||    
T  7824854 gaccttgcatatattatgtattgtctatatcaactgagttaaactcac 7824807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 14827584 - 14827525
Alignment:
Q  18 gtttaaatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||| ||| || |||||||||||||||||||||  ||| |||||||||||| |||||    
T  14827584 gtttaaaccccggatcttgcatattttatgcattgtccataccaactgagctaagctcac 14827525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 21506772 - 21506819
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  21506772 gaccttgcatattttatgcattgtccataccaactgagctaagctcac 21506819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 22722449 - 22722402
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||| |||  ||||||||||| |||||    
T  22722449 gaccttgcatattttatgcattgttcatactaactgagctaagctcac 22722402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 25340938 - 25340985
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  25340938 gaccttgcatattttatgcattgtccataccaactgagctaagctcac 25340985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 28244118 - 28244165
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||| ||| |||||||| ||| |||||    
T  28244118 gaccttgcatattttatgcattgttcataccaactgagttaagctcac 28244165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 32629127 - 32629080
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  32629127 gaccttgcatattttatgcattgtccataccaactgagctaagctcac 32629080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 33745146 - 33745099
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||||||| |||||||| |||||    
T  33745146 gaccttgcatattttatgcattgtccatatcaattgagctaagctcac 33745099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 43345021 - 43345068
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| ||||| |||||| ||| ||||||||||||||||||    
T  43345021 gaccttgcatatattatgtattgttcataccaactgagctaaactcac 43345068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 43490431 - 43490478
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||| ||| |||||||||||| |||||    
T  43490431 gaccttgcatatattatgcattgttcataccaactgagctaagctcac 43490478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 44579683 - 44579636
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  44579683 gaccttgcatattttatgcattgtccataccaactgagctaagctcac 44579636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 46090216 - 46090259
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  46090216 cgaccttgcatatatttatgcattgtctatatcaactgagctaa 46090259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 12976609 - 12976663
Alignment:
Q  23 aatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||| |||||||||||| |||||||||||   ||||||||||| |||||||||    
T  12976609 aatcccagaccttgcatatattatgcattgtccctatcaactgagttaaactcac 12976663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 30229533 - 30229587
Alignment:
Q  23 aatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||| ||||||||||||||||||||||||  ||| ||| |||||||| |||||    
T  30229533 aatcccggaccttgcatattttatgcattgtcaataccaattgagctaagctcac 30229587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 33223914 - 33223868
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||| ||||||||||||| || |||||||||||| |||||    
T  33223914 accttgcatatattatgcattgtttctaccaactgagctaagctcac 33223868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 39552519 - 39552477
Alignment:
Q  22 aaatccccgaccttgcatattttatgcattgtttatatcaact 64  Q
    |||||||  |||||||||||||||||||||||||||| |||||    
T  39552519 aaatcccgaaccttgcatattttatgcattgtttataccaact 39552477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 49710767 - 49710721
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    ||||||||||||||||||||||||| ||| |||||||| ||| ||||    
T  49710767 gaccttgcatattttatgcattgttaataccaactgagttaagctca 49710721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 53162244 - 53162198
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||||||  ||||||| |||||||| |||||    
T  53162244 accttgcatattttatgcattgtccatatcaattgagctaagctcac 53162198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 4216409 - 4216454
Alignment:
Q  26 ccccgaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    |||||||||||||||| |||||||||||   |||||||||||||||    
T  4216409 ccccgaccttgcatatattatgcattgtccttatcaactgagctaa 4216454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 12101555 - 12101600
Alignment:
Q  23 aatccccgaccttgcatat-tttatgcattgtttatatcaactgag 67  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||    
T  12101555 aatccgcgaccttgcatatatttatgcattgtctatatcaactgag 12101600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 13800714 - 13800665
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcacat 79  Q
    |||||||||||| ||||||||||||  || |||||||||||| |||||||    
T  13800714 gaccttgcatatattatgcattgttcttaccaactgagctaagctcacat 13800665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 43316613 - 43316662
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||| |||||||||| | ||||||||||||||||| |||||    
T  43316613 cgaccttgcatatatttatgcattatctatatcaactgagctaagctcac 43316662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 47787736 - 47787777
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaa 72  Q
    ||||||||||||| ||||||| | ||||||||||||||||||    
T  47787736 accttgcatatttcatgcattatctatatcaactgagctaaa 47787777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 50570204 - 50570249
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    ||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  50570204 accttgcatatattatgcattgtctataccaactgagctaagctca 50570249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 17507714 - 17507754
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||| |||||||||||  ||||||||||||||||    
T  17507714 accttgcatatattatgcattgtcaatatcaactgagctaa 17507754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 47185822 - 47185862
Alignment:
Q  34 ttgcatattttatgcattgtttatatcaactgagctaaact 74  Q
    |||||||||||||||||||| | || |||||||||||||||    
T  47185822 ttgcatattttatgcattgtctttaccaactgagctaaact 47185862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 53996346 - 53996298
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| |||||||||||  ||| |||||||||||| ||||||    
T  53996346 gaccttgcatatattatgcattgtccataccaactgagctaagctcaca 53996298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 54113388 - 54113340
Alignment:
Q  30 gaccttgcatat-tttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||  |||||||||||| ||||||||||||||||| |||||    
T  54113388 gaccttgcatacatttatgcattgtctatatcaactgagctaagctcac 54113340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 54203844 - 54203888
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaaa 72  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||||    
T  54203844 cgaccttgcatatatttatacattgtctatatcaactgagctaaa 54203888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 3393583 - 3393630
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  3393583 accttgcatatattatgcattgttcatatcaactgagctaaactcaca 3393630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 29233988 - 29234035
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  29233988 gaccttgcatattttatgcattgtctataccaactgagctaaactcac 29234035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 17917140 - 17917200
Alignment:
Q  18 gtttaaatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||| ||||||  ||||| |||||||||||||||||  |||||||||||||||||||||||    
T  17917140 gtttgaatcccgaaccttacatattttatgcattgtccatatcaactgagctaaactcaca 17917200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 7158820 - 7158773
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||    
T  7158820 gaccttgcatattttatgcattgtccatatcaactgggctaaactcac 7158773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 45701375 - 45701328
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  45701375 gaccttacatattttatgcattgttcataccaactgagctaaactcac 45701328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 7550950 - 7550896
Alignment:
Q  23 aatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||| ||||||| ||||||||||||||||| |||||||||||| ||| |||||    
T  7550950 aatcccggaccttgtatattttatgcattgttcatatcaactgagttaagctcac 7550896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 44641572 - 44641527
Alignment:
Q  32 ccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||| |||||||||||  ||||||||||||||||||||||    
T  44641572 ccttgcatatattatgcattgtccatatcaactgagctaaactcac 44641527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 25086530 - 25086482
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    ||||||||||||||||||||||||  ||| |||||||||||| ||||||    
T  25086530 gaccttgcatattttatgcattgtccataccaactgagctaagctcaca 25086482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 34521204 - 34521252
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| |||||||||||  ||| |||||||||||||||||||    
T  34521204 gaccttgcatatattatgcattgtccataccaactgagctaaactcaca 34521252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 39452520 - 39452460
Alignment:
Q  18 gtttaaatccccgaccttgcatatttt-atgcattgtttatatcaactgagctaaactcac 77  Q
    |||| |||||| ||||||||||||||| |||||||||| ||| |||||||||||| |||||    
T  39452520 gtttgaatcccagaccttgcatatttttatgcattgttcataccaactgagctaagctcac 39452460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 3528483 - 3528530
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||| ||||| |||| |||||||| |||||||||||||||||||||    
T  3528483 gaccttacatatattatacattgtttctatcaactgagctaaactcac 3528530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 16826401 - 16826354
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  16826401 gaccttgcatattttatgcattgtccatagcaactgagctaagctcac 16826354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 31401667 - 31401714
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| ||||||||||||| | ||||||||| |||||||||    
T  31401667 gaccttgcatatattatgcattgtttttgtcaactgagttaaactcac 31401714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 32950775 - 32950822
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||||||| |||||||| ||| |||||    
T  32950775 gaccttgcatatattatgcattgtttataccaactgagttaagctcac 32950822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 41032978 - 41032931
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||| ||||||||||||||||| |||||||||||| ||| |||||    
T  41032978 gaccttgtatattttatgcattgttcatatcaactgagttaagctcac 41032931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 42888622 - 42888575
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  42888622 gaccttgcatattttatgcattgtccataccaactgagctaagctcac 42888575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 48100768 - 48100721
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||||||||||||||  ||| |||||||||||| ||||||    
T  48100768 accttgcatattttatgcattgtccataccaactgagctaagctcaca 48100721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 52441525 - 52441572
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| ||||||||||| |||| |||||||||||| |||||    
T  52441525 gaccttgcatatattatgcattgtctataccaactgagctaagctcac 52441572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 15549250 - 15549292
Alignment:
Q  30 gaccttgcatatt-ttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  15549250 gaccttgcatattattatgcattgtctatatcaactgagctaa 15549292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 24506930 - 24506968
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  24506930 cttgcatattttatacattgtctatatcaactgagctaa 24506968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 39879238 - 39879284
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaaact 74  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||||||    
T  39879238 cgaccttgcatatatttatacattgtctatatcaactgagctaaact 39879284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 48681948 - 48681994
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||| |||||||||||| ||| |||||||||||| |||||    
T  48681948 accttgcatatattatgcattgttcataccaactgagctaagctcac 48681994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 13779621 - 13779584
Alignment:
Q  34 ttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  13779621 ttgcatatattatgcattgtctatatcaactgagctaa 13779584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 32962610 - 32962573
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgag 67  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  32962610 gaccttgcatattttatgcattgttcataccaactgag 32962573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 34877716 - 34877671
Alignment:
Q  32 ccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||||| | |||||| |||| |||||||||    
T  34877716 ccttgcatattttatgcattgtctctatcaattgagttaaactcac 34877671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 36228613 - 36228572
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaa 72  Q
    |||||||||||||||||||||||  ||||||||| |||||||    
T  36228613 accttgcatattttatgcattgtccatatcaactaagctaaa 36228572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 50372383 - 50372416
Alignment:
Q  38 atattttatgcattgtttatatcaactgagctaa 71  Q
    |||| |||||||||||||||||||||||||||||    
T  50372383 atatattatgcattgtttatatcaactgagctaa 50372416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 5503780 - 5503820
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    |||||| |||||||||||||||||| || ||||||||||||    
T  5503780 accttgtatattttatgcattgtttctaccaactgagctaa 5503820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 12214040 - 12213992
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| ||||| ||||||  ||||||||||||||| ||||||    
T  12214040 gaccttgcatatattatgtattgttcctatcaactgagctaagctcaca 12213992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 15382833 - 15382881
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| |||| ||||||| |||||||||||| ||| ||||||    
T  15382833 gaccttgcatatattatacattgttcatatcaactgagttaagctcaca 15382881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 26834560 - 26834520
Alignment:
Q  37 catattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||| ||| |||||||||||||||| |||||    
T  26834560 catattttatgcatcgttcatatcaactgagctaagctcac 26834520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 28832185 - 28832233
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| |||||||||||| ||| |||||||| ||| ||||||    
T  28832185 gaccttgcatatattatgcattgttcataccaactgagttaagctcaca 28832233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 43119214 - 43119258
Alignment:
Q  31 accttgcatat-tttatgcattgtttatatcaactgagctaaact 74  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||    
T  43119214 accttgcatatatttatacattgtctatatcaactgagctaaact 43119258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 43545864 - 43545912
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    ||||||||||||||||||||||||  ||| ||||| || ||||||||||    
T  43545864 gaccttgcatattttatgcattgtcaataccaactaagttaaactcaca 43545912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 43840346 - 43840386
Alignment:
Q  37 catattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  43840346 catattttatgcattgtccatatcaactgagttaaactcac 43840386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 49868058 - 49868010
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| ||||||||| |  |||||||||||| ||||||||||    
T  49868058 gaccttgcatatattatgcattatccatatcaactgagttaaactcaca 49868010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 50595900 - 50595944
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||||| ||| ||| |||||||| |||||    
T  50595900 cttgcatattttatgcattgttcataccaattgagctaagctcac 50595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 16221361 - 16221406
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||    
T  16221361 accttgcatattttatgcattgttcataccaactgagctaaactca 16221406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 30762512 - 30762557
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||    
T  30762512 cttgcatattttatgcattgtctataccaactgagctaaactcaca 30762557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 29734738 - 29734690
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| |||||||||||  |||||||||||||||||||||||    
T  29734738 gaccttgcatatattatgcattgtccatatcaactgagctaaactcaca 29734690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 23718982 - 23718935
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  23718982 gaccttgcatattttatgcgttgttcaaatcaactgagctaaactcac 23718935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 24106654 - 24106607
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  24106654 gaccttgcatattttatgcgttgttcaaatcaactgagctaaactcac 24106607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 25186256 - 25186303
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||||    
T  25186256 gaccttgcatatattatgcattgtccatatcaactgagctaaactcac 25186303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 42475124 - 42475171
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  42475124 gaccttgcatattttatgcattgtttataccaactgagttaagctcac 42475171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 37119274 - 37119320
Alignment:
Q  32 ccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||    
T  37119274 ccttgcatatattatgcattgttcatatcaactgagttaaactcaca 37119320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 29133501 - 29133542
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaact 74  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  29133501 cttgcatattttatgcattgttcataccaactgagctaaact 29133542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 6228680 - 6228640
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  6228680 accttgcatatattatgcattgtttatatcaattgagctaa 6228640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 23756758 - 23756718
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  23756758 accttgcatattttatgtattgtctatatcaactgagctaa 23756718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 41859899 - 41859851
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    ||||||||||||||||||||||||  ||| |||||||| ||||||||||    
T  41859899 gaccttgcatattttatgcattgtccataccaactgagttaaactcaca 41859851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 7121782 - 7121821
Alignment:
Q  38 atattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  7121782 atattttatgcattgtttatatcaattgagttaaactcac 7121821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 33064033 - 33063986
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||  |||||||||||||||| |||||    
T  33064033 gaccttgcatatattatgcattgtccatatcaactgagctaagctcac 33063986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 39761485 - 39761438
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||   |||||||||||||||||||||    
T  39761485 gaccttgcatatattatgcattgtccttatcaactgagctaaactcac 39761438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 41672299 - 41672342
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaact 74  Q
    ||||| |||||||||||||||||||||| ||||||| |||||||    
T  41672299 accttacatattttatgcattgtttataccaactgaactaaact 41672342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 18782554 - 18782600
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    |||||||||||| ||||||||||||| || ||||| |||||||||||    
T  18782554 gaccttgcatatattatgcattgtttctaccaacttagctaaactca 18782600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 19967464 - 19967418
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||| || |||||||||||| |||||||||||||||| |||||    
T  19967464 accttgcacatattatgcattgttcatatcaactgagctaagctcac 19967418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 24305320 - 24305366
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||||||  |||| ||||||||||| |||||    
T  24305320 accttgcatattttatgcattgtccatattaactgagctaagctcac 24305366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 29896309 - 29896355
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||| ||||||||||||| ||||||||||  |||||||||    
T  29896309 accttgcatatattatgcattgtttctatcaactgaattaaactcac 29896355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 32901428 - 32901382
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    |||||| ||||||||||||||| |  |||||||||||||||||||||    
T  32901428 gacctttcatattttatgcattatccatatcaactgagctaaactca 32901382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 7302155 - 7302196
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||||||||||||||   |||||||||||||||    
T  7302155 gaccttgcatattttatgcattgtccctatcaactgagctaa 7302196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 22571883 - 22571920
Alignment:
Q  34 ttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  22571883 ttgcatatattatgcattgtctatatcaactgagctaa 22571920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 36474809 - 36474768
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||||||||||||||   |||||||||||||||    
T  36474809 gaccttgcatattttatgcattgtccctatcaactgagctaa 36474768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 3113734 - 3113782
Alignment:
Q  23 aatccccgaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    |||||| ||||||||||||||||||||||||   |||||||||| ||||    
T  3113734 aatcccggaccttgcatattttatgcattgtccttatcaactgaactaa 3113782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 17736833 - 17736793
Alignment:
Q  37 catattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||| ||| |||||||||||| |||||    
T  17736833 catattttatgcattgttcataccaactgagctaagctcac 17736793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 19159987 - 19159951
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgag 67  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  19159987 accttgcatatattatgcattgttcatatcaactgag 19159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 19976201 - 19976153
Alignment:
Q  30 gaccttgcatatt-ttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||| |||||||||||  ||| ||||||||||||||||||    
T  19976201 gaccttgcatattattatgcattgtccataccaactgagctaaactcac 19976153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 24581032 - 24581072
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||| ||||||||||||| ||| |||||||||||    
T  24581032 accttgcatatattatgcattgtttttatgaactgagctaa 24581072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 34464426 - 34464470
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||| |||||||||||  ||| ||||||||||||||||||    
T  34464426 cttgcatatattatgcattgtccataccaactgagctaaactcac 34464470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 35287665 - 35287725
Alignment:
Q  17 agtttaaatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||| ||| |||||||||| | |||||||||||   |||||||||||| ||||||||    
T  35287665 agtttaaaccccggaccttgcatctattatgcattgtccctatcaactgagccaaactcac 35287725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 35327396 - 35327356
Alignment:
Q  37 catattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||| ||||||| |||||||||||| |||||||||    
T  35327396 catattttatacattgttcatatcaactgagttaaactcac 35327356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 40853832 - 40853880
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| ||||||||  || |||||||||||||||| ||||||    
T  40853832 gaccttgcatatattatgcatatttcatatcaactgagctaagctcaca 40853880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 18489090 - 18489138
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  18489090 gaccttgcatatattatgcattgtctataccaactgagctaaactcaca 18489138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 9893685 - 9893726
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  9893685 gaccttgcatattttatgcattatctatatcaactgagctaa 9893726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 10704332 - 10704393
Alignment:
Q  17 agtttaaatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    ||||| || ||| ||||||||||||||||||||||||  ||| |||||||||||| ||||||    
T  10704332 agtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcaca 10704393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 2530059 - 2530016
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  2530059 cgaccttgcatatatttatgcattgtctatatcaactgagctaa 2530016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 8314802 - 8314759
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||    
T  8314802 cgaccttgcatatatttatacattgtttatatcaactgagctaa 8314759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 16166388 - 16166431
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  16166388 cgaccttgcatatatttatgcattgtctatatcaactgagctaa 16166431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 18589869 - 18589928
Alignment:
Q  18 gtttaaatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||| ||| |||||||||||| |||||||||||| ||| |||||||| ||| |||||    
T  18589869 gtttaaaccccggaccttgcatatattatgcattgttcataccaactgagttaagctcac 18589928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 28207179 - 28207132
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  28207179 gaccttgcatattttatgcattgtccataccaactgagctaagctcac 28207132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 32760557 - 32760510
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||| ||||||||||||||| ||||| |||||| |||||    
T  32760557 gaccttgcatattctatgcattgtttataccaactaagctaatctcac 32760510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 7713578 - 7713532
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||| ||||||||| || |||||||||||| |||||||||    
T  7713578 accttgcatatattatgcattattcatatcaactgagttaaactcac 7713532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 16193153 - 16193107
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||| |||||||||||||||||| ||| ||||||| ||||||||||    
T  16193153 accttacatattttatgcattgttcataccaactgaactaaactcac 16193107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 25709780 - 25709738
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaa 72  Q
    |||||||||||| ||||||||||||| |||||||||| |||||    
T  25709780 gaccttgcatatattatgcattgtttttatcaactgaactaaa 25709738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 27903159 - 27903113
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||| |||||||||||| ||| ||||||| ||||||||||    
T  27903159 accttgcatatattatgcattgttcataccaactgaactaaactcac 27903113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 29382675 - 29382721
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaaact 74  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||||||    
T  29382675 cgaccttgcatatatttatacattgtctatatcaactgagctaaact 29382721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 42659623 - 42659577
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||| ||||| ||||||||| |||||||||| ||||||||||||||    
T  42659623 accttacatatattatgcattatttatatcaattgagctaaactcac 42659577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 25385098 - 25385053
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    |||||||||||||||||||||||| ||| ||| |||| ||||||||    
T  25385098 accttgcatattttatgcattgttcataccaattgagttaaactca 25385053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 29962404 - 29962359
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||    
T  29962404 accttgcatatattatacattgtttctatcaactgagctaagctca 29962359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 30012394 - 30012439
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    ||||||||||| |||| |||||||| ||||||||||||||| ||||    
T  30012394 accttgcatatattatacattgtttctatcaactgagctaagctca 30012439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 12909094 - 12909126
Alignment:
Q  44 tatgcattgtttatatcaactgagctaaactca 76  Q
    |||| ||||||||||||||||||||||||||||    
T  12909094 tatgtattgtttatatcaactgagctaaactca 12909126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 13409597 - 13409553
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaact 74  Q
    ||||||| |||| ||||||||||||  ||||||||||||||||||    
T  13409597 gaccttgtatatattatgcattgttcttatcaactgagctaaact 13409553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 17708120 - 17708084
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgag 67  Q
    |||||||||||||||||||||||  ||||||||||||    
T  17708120 accttgcatattttatgcattgtccatatcaactgag 17708084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 18331754 - 18331706
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    ||||||||||||||||||||||||  ||| ||| |||||||| ||||||    
T  18331754 gaccttgcatattttatgcattgtccataccaagtgagctaagctcaca 18331706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 18789082 - 18789042
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||||||||||||| | || ||||||||||||    
T  18789082 accttgcatattttatgcattgtctctaccaactgagctaa 18789042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 22619918 - 22619874
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||| ||||||||||||||||| ||| |||||||||||| |||||    
T  22619918 cttgtatattttatgcattgttcataccaactgagctaagctcac 22619874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 31602840 - 31602880
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||| |||||||||||| ||| ||||||||||||    
T  31602840 accttgcatatattatgcattgttcataccaactgagctaa 31602880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 33584124 - 33584084
Alignment:
Q  37 catattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||| |||| ||||||| ||||||||||||||||||||||    
T  33584124 catatattatacattgttcatatcaactgagctaaactcac 33584084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 12671765 - 12671809
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||    
T  12671765 cttgcatattttatgcattgtctataccaactgagctaaactcac 12671809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 35287521 - 35287568
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  35287521 gaccttgcatattttatgcattgttcataccaactgagctaagctcac 35287568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 54857629 - 54857676
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||||||| |||| ||||||| |||||    
T  54857629 gaccttgcatattttatgcattgtttataccaaccgagctaagctcac 54857676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 27740786 - 27740740
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||    
T  27740786 accttgcatattttatgcattgtctatatcaactgagccaacctcac 27740740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 39171385 - 39171431
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||    
T  39171385 accttgcatattttatgcattgtccatatcaactgagctaagctcac 39171431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 43374287 - 43374333
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||    
T  43374287 accttgcatattttatgcattgtccatatcaactgagctaagctcac 43374333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 42198594 - 42198631
Alignment:
Q  34 ttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  42198594 ttgcatattttatgcattgtttataccaactgagctaa 42198631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 3936674 - 3936626
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| |||||||||||| ||| |||||||||||| ||||||    
T  3936674 gaccttgcatatattatgcattgttcataccaactgagctaagctcaca 3936626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 16304100 - 16304156
Alignment:
Q  18 gtttaaatccccgaccttgcatattttatgcattgtttatatcaactgagctaaact 74  Q
    |||| |||||| |||||||||||| |||||||||||  ||| |||||||||||||||    
T  16304100 gtttgaatcccggaccttgcatatattatgcattgtccataccaactgagctaaact 16304156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 19347335 - 19347375
Alignment:
Q  32 ccttgcatattttatgcattgtttatatcaactgagctaaa 72  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  19347335 ccttgcatattttatgcattgtccatatcaactgagctaaa 19347375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 19479491 - 19479539
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| |||||||||||| |||| ||||||||||| ||||||    
T  19479491 gaccttgcatatattatgcattgttcatattaactgagctaagctcaca 19479539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 19935174 - 19935222
Alignment:
Q  29 cgaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  19935174 cgaccttgcatagattatgcattgttcttatcaactgagctaaactcac 19935222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 22040696 - 22040652
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactc 75  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||    
T  22040696 accttgcatatattatgcattgtccatatcaactgagctaaactc 22040652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 28031859 - 28031811
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||||||||||||||||   | |||||||||||||||||||    
T  28031859 gaccttgcatattttatgcattgttccaaccaactgagctaaactcaca 28031811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 7030907 - 7030954
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||||||| |||| |||||||| ||| |||||    
T  7030907 gaccttgcatattttatgcattgtctataccaactgagttaagctcac 7030954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 9946474 - 9946427
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  9946474 gaccttgcatattttatgcattgtccataccaactgagctaagctcac 9946427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 14079298 - 14079252
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  14079298 gaccttgcatatattatgcattgttaata-caactgagctaaactcac 14079252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 18903772 - 18903819
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||| ||||| ||||||||| ||| |||||||||||||||||||||    
T  18903772 gaccttacatatattatgcattatttttatcaactgagctaaactcac 18903819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 28435263 - 28435310
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    ||||||||||| |||||||||||  ||| |||||||||||||||||||    
T  28435263 accttgcatatattatgcattgtccataccaactgagctaaactcaca 28435310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 29099722 - 29099765
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  29099722 cgaccttgcatatatttatgcattgtctatatcaactgagctaa 29099765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 32180873 - 32180830
Alignment:
Q  34 ttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||| |||| |||||||||||| |||||    
T  32180873 ttgcatattttatgcattgtctataccaactgagctaagctcac 32180830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 36662383 - 36662430
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||| |||||||||||||||| |||| |||||||| |||||||||    
T  36662383 gaccttgtatattttatgcattgtctataccaactgagttaaactcac 36662430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 52620613 - 52620570
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  52620613 cgaccttgcatatatttatgcattgtctatatcaactgagctaa 52620570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 56564997 - 56565044
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||||||| |||||||| |||||    
T  56564997 gaccttgcatattttatgcattgtccatatcaattgagctaagctcac 56565044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 2431043 - 2430997
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||| |||||  ||| ||||||||||||||||||    
T  2431043 accttgcatattttatgtattgtcaataccaactgagctaaactcac 2430997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 8151178 - 8151136
Alignment:
Q  30 gaccttgcatat-tttatgcattgtttatatcaactgagctaa 71  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  8151178 gaccttgcatatatttatacattgtttatatcaactgagctaa 8151136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 18138311 - 18138265
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaaact 74  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||||    
T  18138311 cgaccttgcatatatttatgcattgactatatcaactgagctaaact 18138265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 20403182 - 20403228
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    |||||||||||| ||||||||||||  ||||||||||||||| ||||    
T  20403182 gaccttgcatatattatgcattgttcctatcaactgagctaagctca 20403228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 35021482 - 35021528
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||    
T  35021482 accttgcatattttatgtattgtccatatcaactgagctaagctcac 35021528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 49125520 - 49125474
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaaact 74  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||||    
T  49125520 cgaccttgcatatatttatgcattgactatatcaactgagctaaact 49125474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 51002333 - 51002287
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||| |||| |||||||| ||| |||||    
T  51002333 accttgcatattttatgcattgtctataccaactgagttaagctcac 51002287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 241398 - 241439
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||||||||||||||| ||| |||| |||||||    
T  241398 gaccttgcatattttatgcattgttcataccaaccgagctaa 241439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 7291635 - 7291688
Alignment:
Q  23 aatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    ||||||||||||||||||| ||||  ||| |||||| ||||||| |||||||||    
T  7291635 aatccccgaccttgcatatattatagattatttataccaactgaactaaactca 7291688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 16431663 - 16431622
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||||||||||||||  ||| ||||||||||||    
T  16431663 gaccttgcatattttatgcattgtccataccaactgagctaa 16431622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 20383535 - 20383486
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcacat 79  Q
    |||||||||||| |||||||||||  ||| |||||||||||| |||||||    
T  20383535 gaccttgcatatattatgcattgtccataccaactgagctaagctcacat 20383486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 27655778 - 27655737
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    |||||||||||| ||||||||||||| |||||||||| ||||    
T  27655778 gaccttgcatatattatgcattgtttctatcaactgaactaa 27655737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 35151496 - 35151463
Alignment:
Q  38 atattttatgcattgtttatatcaactgagctaa 71  Q
    |||||||||||||||||||||| |||||||||||    
T  35151496 atattttatgcattgtttatataaactgagctaa 35151463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 48251923 - 48251964
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaa 72  Q
    ||||||||||| |||| ||||||| |||||||||||||||||    
T  48251923 accttgcatatattatacattgttcatatcaactgagctaaa 48251964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 6087794 - 6087746
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| ||||||||| | |||| |||||||||||| ||||||    
T  6087794 gaccttgcatatattatgcattatctataccaactgagctaagctcaca 6087746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 9913943 - 9913899
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||| ||||||||||||||||| ||| |||||||||||| |||||    
T  9913943 cttgtatattttatgcattgttcataccaactgagctaagctcac 9913899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 16584964 - 16585004
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    |||||||||||||||||||||||  ||||||| ||||||||    
T  16584964 accttgcatattttatgcattgtccatatcaattgagctaa 16585004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 23154638 - 23154594
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||||||  | |||||||||||| |||||    
T  23154638 cttgcatattttatgcattgtttcaaccaactgagctaagctcac 23154594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 31780792 - 31780744
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    ||||||||||||||||||||||||   || |||||||||||| ||||||    
T  31780792 gaccttgcatattttatgcattgtccttaccaactgagctaagctcaca 31780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 34247487 - 34247439
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| |||||||||||   || |||||||||||||||||||    
T  34247487 gaccttgcatatattatgcattgtccttaccaactgagctaaactcaca 34247439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 49021813 - 49021765
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||||||||| |||||  ||| |||||| ||||||||||||    
T  49021813 gaccttgcatattttatgtattgtccataccaactgcgctaaactcaca 49021765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 51458725 - 51458677
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||||||||| |||||  ||| |||||||||||| ||||||    
T  51458725 gaccttgcatattttatgtattgtccataccaactgagctaagctcaca 51458677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 17002356 - 17002399
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||    
T  17002356 cttgcatattttatgcattgtctatatcaactgagctaatctca 17002399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 37750017 - 37750060
Alignment:
Q  34 ttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  37750017 ttgcatatattatgcattgttcatatcaactgagctaaactcac 37750060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 39433457 - 39433410
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||| |||||| |||||||||||||||| |||||    
T  39433457 gaccttgcatattttatgtattgttcatatcaactgagctaagctcac 39433410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 14279586 - 14279632
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||| |||| |||||||| |||||||||    
T  14279586 accttgcatattttatgcattgtctataccaactgagttaaactcac 14279632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 29652265 - 29652219
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||    
T  29652265 gaccttgcatatattatgcattgttcttatcaactgagctaaactca 29652219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 2297399 - 2297346
Alignment:
Q  17 agtttaaatccccgaccttgcatattttatgcattgtttatatcaactgagcta 70  Q
    ||||||||||||  ||| |||||||||||||||||||  |||||||||||||||    
T  2297399 agtttaaatcccaaaccatgcatattttatgcattgtccatatcaactgagcta 2297346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 574431 - 574383
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||| ||||| ||||||||||| ||||||||||||||||| ||||||    
T  574431 gaccttacatatattatgcattgtctatatcaactgagctaagctcaca 574383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 2554226 - 2554274
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||||||||| |||||  |||||||||||||||| ||||||    
T  2554226 gaccttgcatattttatgtattgtccatatcaactgagctaagctcaca 2554274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 15310370 - 15310322
Alignment:
Q  30 gaccttgcatat-tttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  15310370 gaccttgcatatatttatgcattgtctatatcaactgagctaagctcac 15310322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 15490739 - 15490691
Alignment:
Q  30 gaccttgcatat-tttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  15490739 gaccttgcatatatttatgcattgtctatatcaactgagctaagctcac 15490691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 26885659 - 26885699
Alignment:
Q  37 catattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||| ||| ||||||||||||||||||    
T  26885659 catattttatgcattgttcataccaactgagctaaactcac 26885699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 34997506 - 34997458
Alignment:
Q  30 gaccttgcatat-tttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  34997506 gaccttgcatatatttatgcattgtctatatcaactgagctaagctcac 34997458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 43778066 - 43778022
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaact 74  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||    
T  43778066 gaccttgcatattttatgcattgtctataccaactgagttaaact 43778022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 1877676 - 1877723
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| ||||||||||| ||||||||||||| ||| |||||    
T  1877676 gaccttgcatatattatgcattgtctatatcaactgagttaagctcac 1877723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 5325525 - 5325568
Alignment:
Q  34 ttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||| |  ||||||||||||||||||||    
T  5325525 ttgcatattttatgcattgtctcaatcaactgagctaaactcac 5325568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 6314337 - 6314384
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||   ||||||||||||||| |||||    
T  6314337 gaccttgcatattttatgcattgtccttatcaactgagctaagctcac 6314384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 11479652 - 11479691
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagcta 70  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  11479652 accttgcatattttatgcattgtctataccaactgagcta 11479691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 24687828 - 24687785
Alignment:
Q  28 ccgaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    |||||||| ||||| |||||||||||||||||||| ||||||||    
T  24687828 ccgaccttacatatattatgcattgtttatatcaattgagctaa 24687785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 27718908 - 27718955
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||  |||||||||||||||| |||||    
T  27718908 gaccttgcatatattatgcattgtccatatcaactgagctaagctcac 27718955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 40048769 - 40048812
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  40048769 cgaccttgcatatatttatgcattgtctatatcaactgagctaa 40048812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 1644680 - 1644734
Alignment:
Q  23 aatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||| |||||| |||||||||||||||| | ||| |||||||||||| |||||    
T  1644680 aatcccagaccttacatattttatgcattgctcataccaactgagctaagctcac 1644734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 8717490 - 8717536
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||| |||||||||||  ||| ||||||||||||||||||    
T  8717490 accttgcatatattatgcattgtccataccaactgagctaaactcac 8717536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 8828172 - 8828218
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||  ||||||| || ||||||||||||||||||    
T  8828172 accttgcatattttataaattgtttttaacaactgagctaaactcac 8828218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 10152502 - 10152456
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||| |||||| |||| |||||||||||| |||||    
T  10152502 accttgcatattttatacattgtctataccaactgagctaagctcac 10152456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 14975874 - 14975924
Alignment:
Q  27 cccgaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||||| |||||    
T  14975874 cccgaccctgcatattttatgcactgttcataccaactgagctaagctcac 14975924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 20469326 - 20469372
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||| |||||||||||||||| ||||||| |||| |||||    
T  20469326 accttgcatatattatgcattgtttataccaactgatctaagctcac 20469372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 24195309 - 24195255
Alignment:
Q  17 agtttaaatccccgaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||| || ||| |||||||||||| ||||| |||||| ||||||||||||||||    
T  24195309 agtttgaaccccggaccttgcatatattatgtattgttcatatcaactgagctaa 24195255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 32555300 - 32555254
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||||||  ||| ||||| ||||||||||||    
T  32555300 accttgcatattttatgcattgtccataccaactaagctaaactcac 32555254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 35004245 - 35004199
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaaact 74  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||||||    
T  35004245 cgaccttgcatatatttatacattgtctatatcaactgagctaaact 35004199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 39525427 - 39525381
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaaact 74  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||||||    
T  39525427 cgaccttgcatatatttatacattgtctatatcaactgagctaaact 39525381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 5251018 - 5251059
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||||||||||||||| | ||||||| ||||||||    
T  5251018 gaccttgcatattttatgcattgctcatatcaattgagctaa 5251059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 26991772 - 26991817
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    ||||||||||| |||||||||||  ||||||||||||| |||||||    
T  26991772 accttgcatatattatgcattgtccatatcaactgagccaaactca 26991817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 943144 - 943096
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||||||||||||||| |||| | ||| |||||| ||||||    
T  943144 gaccttgcatattttatgcattgtctatagcgactaagctaagctcaca 943096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 1764971 - 1765015
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||| ||||| |||||||||||| ||| |||||    
T  1764971 cttgcatattttatgcgttgttcatatcaactgagttaagctcac 1765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 5155578 - 5155614
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgag 67  Q
    ||||||||||||||||||||||||  |||||||||||    
T  5155578 accttgcatattttatgcattgttcttatcaactgag 5155614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 6235553 - 6235613
Alignment:
Q  18 gtttaaatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||| |||||| |||||| ||||| |||||||| ||  ||| |||||||||||||||||||    
T  6235553 gtttgaatcccggaccttacatatattatgcatcgtccataccaactgagctaaactcaca 6235613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 6248348 - 6248300
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| ||||| || || ||||||||||||| ||||||||||    
T  6248348 gaccttgcatatattatgtatcgtatatatcaactgagttaaactcaca 6248300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 12910820 - 12910868
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| |||||||||||  ||| |||||||||||| ||||||    
T  12910820 gaccttgcatatattatgcattgtccataccaactgagctaatctcaca 12910868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 13286175 - 13286131
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||| ||||||||||| |||| |||||||||||| |||||    
T  13286175 cttgcatatattatgcattgtctataccaactgagctaagctcac 13286131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 24338218 - 24338266
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||||||||||||| | |||| || ||||||||| ||||||    
T  24338218 gaccttgcatattttatgcattatctataccatctgagctaagctcaca 24338266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 30427778 - 30427730
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| |||||||||||  ||| |||||||||||| ||||||    
T  30427778 gaccttgcatatattatgcattgtccataccaactgagctaagctcaca 30427730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 30694440 - 30694500
Alignment:
Q  17 agtttaaatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||| |||  |||||||||||||||||||||||| |||  ||||||| ||| |||||    
T  30694440 agtttaaaccccgaaccttgcatattttatgcattgttcatacaaactgagataagctcac 30694500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 40919373 - 40919417
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaact 74  Q
    |||||||||||| ||||||||||||  || |||||||||||||||    
T  40919373 gaccttgcatatattatgcattgttcctaccaactgagctaaact 40919417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 44655042 - 44654994
Alignment:
Q  30 gaccttgcatat-tttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||| |||||||||| |||||| |||||    
T  44655042 gaccttgcatatatttatgcattgtctatatcaactaagctaagctcac 44654994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 5458073 - 5458132
Alignment:
Q  18 gtttaaatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||| |||||| |||||||||||| ||||||||||||  ||||||||||||||| |||||    
T  5458073 gtttgaatcccagaccttgcatatattatgcattgttcttatcaactgagctaagctcac 5458132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 4406725 - 4406771
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaaact 74  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  4406725 cgaccttgcatatatttatgcattgtctatatcaactgagctaaact 4406771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 5483379 - 5483333
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaaact 74  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||    
T  5483379 cgaccttgcatatatttatacattgtttatatcaactgagctaaact 5483333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 13955526 - 13955480
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||    
T  13955526 accttgcatattttatgcattgttcataccaactgagctaagctcac 13955480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 25246815 - 25246771
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||    
T  25246815 cttgcatatattatgcattgtctttatcaactgagctaaactcac 25246771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 19416561 - 19416514
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  19416561 gaccttgcatattttatgcattgtccataccaactgagctaagctcac 19416514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 19578151 - 19578198
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  | |||||||||| |||||||||    
T  19578151 gaccttgcatattttatgcattgtcaaaatcaactgagttaaactcac 19578198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 23198767 - 23198810
Alignment:
Q  34 ttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||    
T  23198767 ttgcatattttatgcattgttcataccaactgagttaaactcac 23198810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 27993043 - 27993090
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||| ||| |||||||| ||| |||||    
T  27993043 gaccttgcatattttatgcattgttcataccaactgagttaagctcac 27993090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 29734808 - 29734851
Alignment:
Q  34 ttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||    
T  29734808 ttgcatatattatgcattgtttctatcgactgagctaaactcac 29734851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 34807265 - 34807218
Alignment:
Q  31 accttgcatattttatgcattgtt-tatatcaactgagctaaactcac 77  Q
    ||||||||||| |||||||||||| | |||||||||||||||||||||    
T  34807265 accttgcatatattatgcattgttctttatcaactgagctaaactcac 34807218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 44558788 - 44558835
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||  ||| ||||||||||||||||||    
T  44558788 gaccttgcatatattatgcattgtccataccaactgagctaaactcac 44558835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 46207803 - 46207760
Alignment:
Q  34 ttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||| ||| |||||||||||| |||||    
T  46207803 ttgcatattttatgcattgttcataccaactgagctaagctcac 46207760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 47589571 - 47589614
Alignment:
Q  34 ttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||| ||| |||||||||||| |||||    
T  47589571 ttgcatattttatgcattgttcataccaactgagctaagctcac 47589614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 21134452 - 21134494
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagcta 70  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  21134452 cgaccttgcatatatttatgcattgtctatatcaactgagcta 21134494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 37307891 - 37307933
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactc 75  Q
    ||||||||| ||||||||||||  |||||||||||||||||||    
T  37307891 cttgcatatattatgcattgttcctatcaactgagctaaactc 37307933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 41250061 - 41250107
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactca 76  Q
    |||||||||||| |||| |||||||  ||||||||||||||||||||    
T  41250061 gaccttgcatatattatacattgttcttatcaactgagctaaactca 41250107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 1311817 - 1311854
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagc 68  Q
    |||||||||||||||||||||||  |||||||||||||    
T  1311817 accttgcatattttatgcattgtccatatcaactgagc 1311854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 3672569 - 3672614
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    ||||||||| ||||| |||||  |||||||||||||||||||||||    
T  3672569 cttgcatatattatgtattgtccatatcaactgagctaaactcaca 3672614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 24027069 - 24027114
Alignment:
Q  26 ccccgaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    |||||||||||||||||||||||||||||   ||||||| ||||||    
T  24027069 ccccgaccttgcatattttatgcattgttccaatcaactaagctaa 24027114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 1261215 - 1261175
Alignment:
Q  37 catattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||| |||||| ||||||||||||||||| ||||||||||    
T  1261215 catatattatgctttgtttatatcaactgaactaaactcac 1261175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 1285086 - 1285130
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||| ||||||||||||  ||||||||||| |||||||||    
T  1285086 cttgcatatattatgcattgttcctatcaactgagttaaactcac 1285130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 3948098 - 3948054
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||| ||||||||||| | ||||||||||| |||||||||    
T  3948098 cttgcatatattatgcattgtctctatcaactgagttaaactcac 3948054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 8683114 - 8683070
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||| ||||||||||| |||| |||||||||||| |||||    
T  8683114 cttgcatatattatgcattgtctataccaactgagctaagctcac 8683070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 9522958 - 9522918
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    ||||||||||| |||||||||||| ||| ||||||||||||    
T  9522958 accttgcatatattatgcattgttcataccaactgagctaa 9522918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 25288711 - 25288671
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagcta 70  Q
    |||||||||||| |||||||||||  |||||||||||||||    
T  25288711 gaccttgcatatcttatgcattgtccatatcaactgagcta 25288671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 30781488 - 30781452
Alignment:
Q  41 ttttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  30781488 ttttatgcattgtctatatcaactgagctaagctcac 30781452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 31281767 - 31281827
Alignment:
Q  18 gtttaaatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||| |||||| |||||||||||| ||||||||||||| || |||  ||||||| ||||||    
T  31281767 gtttgaatcccagaccttgcatatattatgcattgtttttaccaagagagctaagctcaca 31281827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 35444192 - 35444240
Alignment:
Q  29 cgaccttgcatatt-ttatgcattgtttatatcaactgagctaaactca 76  Q
    ||||| |||||||| |||||||||||| |||||||| ||||||||||||    
T  35444192 cgaccatgcatattattatgcattgttcatatcaacggagctaaactca 35444240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 43539118 - 43539166
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||| ||||| ||||||||||||  ||||||||||||||| ||||||    
T  43539118 gaccttacatatattatgcattgttcctatcaactgagctaagctcaca 43539166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 44651978 - 44652014
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaact 64  Q
    ||||||||||||| |||||||||||||||||||||||    
T  44651978 cgaccttgcatatatttatgcattgtttatatcaact 44652014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 45425499 - 45425451
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcacat 79  Q
    ||||||||||| ||||||||||| | ||||||||||| |||||| ||||    
T  45425499 accttgcatatattatgcattgtctttatcaactgagttaaactgacat 45425451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 47342723 - 47342683
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    |||||||||||||||||||||||  ||| ||||||||||||    
T  47342723 accttgcatattttatgcattgtccataccaactgagctaa 47342683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 48069838 - 48069898
Alignment:
Q  17 agtttaaatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||| ||||||  ||||| ||||| |||||||||||| || ||||||||||||| |||||    
T  48069838 agtttcaatcccaaaccttacatatattatgcattgttcatgtcaactgagctaagctcac 48069898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000007; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 14350995 - 14350949
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||| ||||||||||||||||| |||||||||||| |||||||||    
T  14350995 accttgtatattttatgcattgttcatatcaactgagttaaactcac 14350949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 6833526 - 6833478
Alignment:
Q  30 gaccttgcatat-tttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  6833526 gaccttgcatatatttatgcattgtctatatcaactgagctaagctcac 6833478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 1918472 - 1918519
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| ||||||||||| |||| |||||||| |||||||||    
T  1918472 gaccttgcatatattatgcattgtctataccaactgagttaaactcac 1918519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 4450309 - 4450262
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| ||||||||||| | ||||||||||||||| |||||    
T  4450309 gaccttgcatatattatgcattgtctttatcaactgagctaagctcac 4450262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 13496163 - 13496116
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||| |||||||||||| ||| |||||    
T  13496163 gaccttgcatatattatgcattgttcatatcaactgagttaagctcac 13496116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 21373420 - 21373467
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||| ||| ||||||||||||||    
T  21373420 gaccttgcatattttatgcattgtccataccaattgagctaaactcac 21373467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 24162766 - 24162727
Alignment:
Q  31 accttgcatat-tttatgcattgtttatatcaactgagct 69  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  24162766 accttgcatatatttatgcattgtttatatcaactgagct 24162727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 24623332 - 24623379
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    ||||| ||||| |||||||||||  |||||||||||||||||||||||    
T  24623332 accttacatatattatgcattgtccatatcaactgagctaaactcaca 24623379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 26320577 - 26320624
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  26320577 gaccttgcatattttatgcattgtccataccaactgagctaagctcac 26320624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 4494878 - 4494932
Alignment:
Q  23 aatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||| ||||| ||||||||||||||||||  ||| |||||||||||| |||||    
T  4494878 aatcccagacctcgcatattttatgcattgtccataccaactgagctaagctcac 4494932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 6018672 - 6018718
Alignment:
Q  29 cgaccttgcatat-tttatgcattgtttatatcaactgagctaaact 74  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||||||    
T  6018672 cgaccttgcatatatttatacattgtctatatcaactgagctaaact 6018718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 9445003 - 9444957
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||| ||||||| ||| |||||||||||| |||||    
T  9445003 accttgcatattttatacattgttcataccaactgagctaagctcac 9444957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 12904332 - 12904378
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||| |||||||||||| |||||||||||| ||| |||||    
T  12904332 accttgcatatattatgcattgttcatatcaactgaggtaagctcac 12904378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 32193874 - 32193920
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||| ||||||||||||  || ||||||||||||||||||    
T  32193874 accttgcatatattatgcattgttcttaccaactgagctaaactcac 32193920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 33938694 - 33938740
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||| |||||||||||| ||| |||||||||||| |||||    
T  33938694 accttgcatatattatgcattgttcataccaactgagctaagctcac 33938740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 334187 - 334146
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaa 71  Q
    |||||||||||| ||||||||||| | |||||||||||||||    
T  334187 gaccttgcatatattatgcattgtctttatcaactgagctaa 334146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 14772984 - 14773033
Alignment:
Q  18 gtttaaatccccgaccttgcatattttatgcattgtttatatcaactgag 67  Q
    |||| |||||||||||||| |||| |||||||||||| ||| ||||||||    
T  14772984 gtttgaatccccgaccttggatatattatgcattgttcataccaactgag 14773033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 21936047 - 21936096
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcacat 79  Q
    |||||||||||| ||||| ||||||  || ||||||||||||||||||||    
T  21936047 gaccttgcatatattatgaattgttcttaccaactgagctaaactcacat 21936096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 655763 - 655811
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| |||||||||||  ||| |||||||||||| ||||||    
T  655763 gaccttgcatatattatgcattgtcgataccaactgagctaagctcaca 655811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 8809350 - 8809306
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||| ||||||||||||| |||||| ||| ||||||||||    
T  8809350 cttgcatatattatgcattgtttttatcaattgaactaaactcac 8809306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 12700435 - 12700483
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| |||||||||||| ||| ||||||| |||| ||||||    
T  12700435 gaccttgcatatattatgcattgttcataccaactgaactaagctcaca 12700483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 6402 - 6450
Alignment:
Q  30 gaccttgcatat-tttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  6402 gaccttgcatatatttatgcattgtctatatcaactgagctaagctcac 6450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 1575 - 1528
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  1575 gaccttgcatattttatgcattgtccataccaactgagctaagctcac 1528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 28115 - 28174
Alignment:
Q  18 gtttaaatccccgaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||| |||||| |||||||||||  |||||||||||  ||| ||||||||||||||||||    
T  28115 gtttgaatcccagaccttgcatacgttatgcattgtccataccaactgagctaaactcac 28174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 22958 - 22911
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||| ||||||||| | |||| |||||    
T  22958 gaccttgcatattttatgcattgttcatatcaactaaactaagctcac 22911  T

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Target: scaffold0154 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 37582 - 37535
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||| ||| ||||| |||||| |||||    
T  37582 gaccttgcatattttatgcattgttcataccaacttagctaagctcac 37535  T

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Target: scaffold0154; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 10772 - 10818
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||||||   || ||||||||||||||||||    
T  10772 accttgcatattttatgcattgtccttaccaactgagctaaactcac 10818  T

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Target: scaffold0031 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 47255 - 47302
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  47255 gaccttgcatattttatgcattgtccataccaactgagctaagctcac 47302  T

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Target: scaffold0197 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 21770 - 21816
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||| |||||||||||||||| |||| |||||||||||| |||||    
T  21770 accttgtatattttatgcattgtctataccaactgagctaagctcac 21816  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 14201 - 14247
Alignment:
Q  31 accttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    ||||||||||| |||||||||||| ||| |||||||| |||||||||    
T  14201 accttgcatatattatgcattgttcataccaactgagttaaactcac 14247  T

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Target: scaffold0334 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 5229 - 5181
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaactcaca 78  Q
    |||||||||||| |||||||||||  ||| ||| |||||||||||||||    
T  5229 gaccttgcatatattatgcattgtccataccaattgagctaaactcaca 5181  T

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Target: scaffold0259 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 5460 - 5416
Alignment:
Q  30 gaccttgcatattttatgcattgtttatatcaactgagctaaact 74  Q
    ||||||||||||||||||||||||  ||| |||| ||||||||||    
T  5460 gaccttgcatattttatgcattgtccataccaaccgagctaaact 5416  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 185307 - 185263
Alignment:
Q  33 cttgcatattttatgcattgtttatatcaactgagctaaactcac 77  Q
    |||||||||||||||||||||  ||| |||||||||||| |||||    
T  185307 cttgcatattttatgcattgtccataccaactgagctaagctcac 185263  T

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