View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5657_high_3 (Length: 328)

Name: NF5657_high_3
Description: NF5657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5657_high_3
NF5657_high_3
[»] chr4 (43 HSPs)
chr4 (11-312)||(55064714-55065011)
chr4 (93-213)||(17822841-17822959)
chr4 (103-222)||(55414406-55414523)
chr4 (85-194)||(2244044-2244153)
chr4 (85-169)||(13126544-13126628)
chr4 (85-211)||(50681057-50681181)
chr4 (85-163)||(25904191-25904269)
chr4 (88-213)||(35571602-35571725)
chr4 (85-210)||(53294082-53294205)
chr4 (85-208)||(2996554-2996674)
chr4 (89-169)||(24169281-24169361)
chr4 (103-221)||(7839347-7839463)
chr4 (87-205)||(21731626-21731742)
chr4 (89-160)||(22030230-22030301)
chr4 (85-168)||(54426062-54426145)
chr4 (104-212)||(1407933-1408040)
chr4 (89-217)||(25332746-25332873)
chr4 (117-228)||(18425773-18425882)
chr4 (85-153)||(21523592-21523659)
chr4 (112-207)||(41512633-41512726)
chr4 (142-204)||(16200006-16200066)
chr4 (88-222)||(20108976-20109108)
chr4 (79-181)||(29912956-29913055)
chr4 (85-211)||(54069385-54069509)
chr4 (106-228)||(55302210-55302330)
chr4 (85-213)||(3069941-3070067)
chr4 (135-228)||(3155564-3155655)
chr4 (85-163)||(26590338-26590416)
chr4 (85-202)||(29774227-29774342)
chr4 (85-163)||(39603138-39603216)
chr4 (86-163)||(46588042-46588119)
chr4 (88-191)||(1706620-1706721)
chr4 (142-228)||(42685385-42685469)
chr4 (98-165)||(49803230-49803297)
chr4 (172-227)||(52746893-52746948)
chr4 (135-213)||(54392837-54392913)
chr4 (143-213)||(56480324-56480392)
chr4 (94-160)||(20109612-20109678)
chr4 (142-227)||(27043855-27043938)
chr4 (135-228)||(51630072-51630163)
chr4 (86-163)||(46592178-46592255)
chr4 (172-228)||(25885820-25885876)
chr4 (85-121)||(31642258-31642294)
[»] chr1 (43 HSPs)
chr1 (86-222)||(24915020-24915154)
chr1 (87-167)||(37473423-37473503)
chr1 (85-211)||(3233983-3234107)
chr1 (82-213)||(41195159-41195287)
chr1 (87-202)||(49938734-49938847)
chr1 (85-222)||(14576622-14576756)
chr1 (97-222)||(37631539-37631662)
chr1 (89-213)||(473140-473261)
chr1 (89-160)||(40977375-40977446)
chr1 (92-211)||(17603359-17603476)
chr1 (82-210)||(27970259-27970386)
chr1 (97-213)||(27976571-27976694)
chr1 (87-208)||(51929509-51929628)
chr1 (94-228)||(13809959-13810091)
chr1 (89-160)||(15477592-15477663)
chr1 (112-209)||(27820332-27820427)
chr1 (85-159)||(29904779-29904853)
chr1 (85-182)||(51695463-51695558)
chr1 (135-227)||(7472274-7472363)
chr1 (130-213)||(2294887-2294968)
chr1 (85-210)||(2295078-2295198)
chr1 (86-161)||(3887601-3887676)
chr1 (88-190)||(10744300-10744399)
chr1 (85-227)||(31517709-31517848)
chr1 (154-222)||(3069971-3070038)
chr1 (85-213)||(38018332-38018458)
chr1 (135-190)||(7137016-7137069)
chr1 (85-161)||(7941632-7941708)
chr1 (135-222)||(34290203-34290288)
chr1 (85-120)||(5741673-5741708)
chr1 (94-169)||(38503442-38503517)
chr1 (89-166)||(43990275-43990355)
chr1 (85-182)||(601046-601141)
chr1 (85-202)||(14331970-14332083)
chr1 (89-167)||(27145708-27145785)
chr1 (85-167)||(36514644-36514726)
chr1 (95-153)||(37517144-37517202)
chr1 (93-202)||(45975677-45975784)
chr1 (85-154)||(11941295-11941364)
chr1 (85-139)||(50644223-50644279)
chr1 (85-125)||(10233616-10233656)
chr1 (95-163)||(41184628-41184696)
chr1 (112-203)||(42174841-42174930)
[»] chr3 (41 HSPs)
chr3 (85-222)||(30443860-30443995)
chr3 (88-213)||(46778162-46778284)
chr3 (89-213)||(20880452-20880574)
chr3 (85-213)||(21367643-21367769)
chr3 (89-210)||(53789433-53789552)
chr3 (85-211)||(39980707-39980831)
chr3 (89-167)||(7301359-7301437)
chr3 (96-213)||(36631030-36631145)
chr3 (85-229)||(20170483-20170625)
chr3 (130-213)||(28622012-28622093)
chr3 (86-169)||(901942-902025)
chr3 (132-222)||(3845577-3845665)
chr3 (82-153)||(37689264-37689334)
chr3 (85-210)||(402510-402633)
chr3 (85-182)||(9832723-9832818)
chr3 (130-210)||(47132310-47132388)
chr3 (85-153)||(31365156-31365224)
chr3 (135-217)||(1217818-1217898)
chr3 (89-222)||(34610778-34610909)
chr3 (92-169)||(37389201-37389278)
chr3 (85-226)||(584009-584148)
chr3 (150-228)||(30956659-30956735)
chr3 (150-228)||(30972471-30972547)
chr3 (85-168)||(46031009-46031092)
chr3 (112-163)||(46478713-46478764)
chr3 (85-191)||(50600147-50600250)
chr3 (86-116)||(2128221-2128251)
chr3 (142-187)||(5436261-5436304)
chr3 (85-202)||(18405799-18405914)
chr3 (110-227)||(36189528-36189642)
chr3 (130-191)||(44747421-44747480)
chr3 (143-212)||(46886718-46886785)
chr3 (85-158)||(944591-944664)
chr3 (85-210)||(13715540-13715665)
chr3 (142-222)||(14145879-14145957)
chr3 (85-169)||(466211-466295)
chr3 (142-201)||(2719456-2719513)
chr3 (85-121)||(21574555-21574591)
chr3 (87-190)||(30573885-30573985)
chr3 (85-121)||(34707465-34707501)
chr3 (115-222)||(35959454-35959559)
[»] chr8 (33 HSPs)
chr8 (87-215)||(27028805-27028931)
chr8 (85-210)||(26771244-26771367)
chr8 (85-228)||(1058045-1058183)
chr8 (85-217)||(18133628-18133758)
chr8 (94-213)||(10114465-10114582)
chr8 (85-222)||(35534581-35534714)
chr8 (82-222)||(29205775-29205912)
chr8 (85-205)||(30251422-30251540)
chr8 (85-212)||(10120733-10120858)
chr8 (85-169)||(31716195-31716279)
chr8 (79-154)||(32840948-32841023)
chr8 (85-228)||(10758225-10758365)
chr8 (85-208)||(29168025-29168146)
chr8 (143-213)||(37353275-37353343)
chr8 (86-136)||(40981155-40981205)
chr8 (89-189)||(1930035-1930133)
chr8 (93-153)||(36338196-36338256)
chr8 (85-168)||(35643956-35644039)
chr8 (85-210)||(38648330-38648453)
chr8 (87-124)||(13958054-13958091)
chr8 (103-151)||(15247763-15247811)
chr8 (95-139)||(27694930-27694974)
chr8 (85-168)||(43045693-43045776)
chr8 (85-171)||(42215275-42215360)
chr8 (135-228)||(3537047-3537140)
chr8 (85-208)||(6881908-6882029)
chr8 (85-138)||(28763417-28763470)
chr8 (85-134)||(41589639-41589688)
chr8 (85-121)||(2487977-2488013)
chr8 (130-213)||(18930678-18930759)
chr8 (89-153)||(27492971-27493035)
chr8 (85-149)||(36963322-36963386)
chr8 (85-169)||(43504769-43504852)
[»] chr2 (50 HSPs)
chr2 (88-228)||(45229473-45229610)
chr2 (86-228)||(41812061-41812199)
chr2 (85-222)||(41851502-41851637)
chr2 (85-213)||(33319782-33319906)
chr2 (112-222)||(12464468-12464576)
chr2 (88-189)||(16451118-16451217)
chr2 (97-213)||(18066104-18066218)
chr2 (89-169)||(4606943-4607023)
chr2 (85-168)||(11863920-11864003)
chr2 (85-163)||(15305698-15305776)
chr2 (85-213)||(26626849-26626975)
chr2 (83-163)||(12289821-12289901)
chr2 (85-184)||(26143608-26143705)
chr2 (94-208)||(43279506-43279616)
chr2 (85-226)||(15757626-15757766)
chr2 (103-217)||(40279169-40279281)
chr2 (105-213)||(3611202-3611308)
chr2 (83-163)||(12194976-12195057)
chr2 (87-160)||(13325597-13325670)
chr2 (103-222)||(42457915-42458032)
chr2 (107-163)||(26202052-26202108)
chr2 (85-169)||(36114437-36114521)
chr2 (87-222)||(41241103-41241235)
chr2 (85-202)||(2142640-2142756)
chr2 (95-169)||(7928276-7928351)
chr2 (94-169)||(20952373-20952448)
chr2 (89-211)||(32592565-32592684)
chr2 (105-190)||(9174814-9174897)
chr2 (85-167)||(31561710-31561792)
chr2 (87-127)||(449907-449947)
chr2 (113-169)||(20926521-20926577)
chr2 (94-153)||(42420200-42420260)
chr2 (85-124)||(28677628-28677667)
chr2 (85-167)||(5902518-5902599)
chr2 (97-171)||(33981138-33981212)
chr2 (85-182)||(40279414-40279508)
chr2 (85-127)||(42419853-42419895)
chr2 (89-213)||(1625876-1625998)
chr2 (88-125)||(12140593-12140630)
chr2 (79-120)||(39622017-39622058)
chr2 (87-160)||(40682365-40682438)
chr2 (144-213)||(42907335-42907404)
chr2 (93-217)||(43570386-43570507)
chr2 (172-228)||(10494629-10494685)
chr2 (85-153)||(25800870-25800937)
chr2 (103-182)||(40279274-40279351)
chr2 (103-182)||(40279344-40279421)
chr2 (89-169)||(41293135-41293215)
chr2 (85-121)||(42659179-42659215)
chr2 (85-121)||(44606079-44606115)
[»] chr5 (39 HSPs)
chr5 (89-217)||(39105436-39105562)
chr5 (88-213)||(40438925-40439047)
chr5 (82-228)||(10639914-10640058)
chr5 (87-211)||(16937853-16937975)
chr5 (85-210)||(16457947-16458070)
chr5 (93-169)||(12857681-12857757)
chr5 (88-211)||(29925819-29925940)
chr5 (85-169)||(37954704-37954788)
chr5 (94-228)||(35446016-35446148)
chr5 (82-160)||(3735123-3735201)
chr5 (93-226)||(12857314-12857445)
chr5 (135-222)||(12425538-12425623)
chr5 (85-228)||(40426726-40426867)
chr5 (135-217)||(41957469-41957549)
chr5 (87-204)||(28776978-28777093)
chr5 (82-206)||(25461074-25461196)
chr5 (89-169)||(7705970-7706050)
chr5 (95-171)||(11700179-11700254)
chr5 (106-228)||(9202737-9202857)
chr5 (134-223)||(32372590-32372678)
chr5 (85-159)||(19460355-19460428)
chr5 (78-222)||(1464981-1465122)
chr5 (85-209)||(32859688-32859808)
chr5 (85-209)||(32861860-32861980)
chr5 (85-169)||(42100329-42100413)
chr5 (93-169)||(42500218-42500293)
chr5 (130-184)||(4014437-4014489)
chr5 (89-191)||(7984967-7985067)
chr5 (85-127)||(3520637-3520679)
chr5 (87-184)||(15246838-15246933)
chr5 (88-122)||(41535446-41535480)
chr5 (85-209)||(32862644-32862764)
chr5 (146-194)||(32942613-32942659)
chr5 (85-169)||(4619725-4619808)
chr5 (87-163)||(9107114-9107190)
chr5 (85-121)||(12459970-12460006)
chr5 (89-121)||(23160734-23160766)
chr5 (171-227)||(42646877-42646933)
chr5 (85-169)||(43300896-43300980)
[»] chr7 (44 HSPs)
chr7 (85-228)||(420321-420462)
chr7 (79-235)||(38499875-38500034)
chr7 (87-228)||(48470005-48470144)
chr7 (89-213)||(33678756-33678878)
chr7 (85-207)||(34744010-34744130)
chr7 (105-230)||(39279921-39280044)
chr7 (85-228)||(20526407-20526548)
chr7 (95-213)||(30570909-30571025)
chr7 (90-163)||(11619131-11619204)
chr7 (130-210)||(46280285-46280363)
chr7 (87-210)||(19022555-19022676)
chr7 (94-213)||(33601387-33601503)
chr7 (85-202)||(45593514-45593630)
chr7 (89-190)||(5947183-5947282)
chr7 (142-235)||(40252132-40252223)
chr7 (85-160)||(3308219-3308295)
chr7 (85-169)||(21568463-21568547)
chr7 (124-211)||(39907781-39907866)
chr7 (89-159)||(3927982-3928052)
chr7 (89-159)||(19302535-19302605)
chr7 (135-204)||(43648225-43648292)
chr7 (85-189)||(44989645-44989748)
chr7 (88-213)||(45790397-45790519)
chr7 (113-217)||(48507694-48507797)
chr7 (105-213)||(17944331-17944437)
chr7 (90-163)||(28614457-28614530)
chr7 (143-222)||(12110327-12110404)
chr7 (85-128)||(4970760-4970803)
chr7 (85-148)||(5947280-5947343)
chr7 (94-228)||(39967881-39968013)
chr7 (135-213)||(44821935-44822011)
chr7 (87-169)||(19214376-19214458)
chr7 (97-210)||(33602007-33602117)
chr7 (130-222)||(22283757-22283847)
chr7 (90-182)||(34035924-34036014)
chr7 (85-169)||(36517597-36517679)
chr7 (135-180)||(39280976-39281021)
chr7 (142-210)||(43694595-43694661)
chr7 (145-217)||(752939-753011)
chr7 (103-167)||(30181232-30181296)
chr7 (172-228)||(34083578-34083634)
chr7 (110-213)||(39279739-39279840)
chr7 (86-169)||(39629928-39630009)
chr7 (142-213)||(47177612-47177681)
[»] chr6 (25 HSPs)
chr6 (103-208)||(34430447-34430550)
chr6 (89-226)||(20368153-20368287)
chr6 (85-227)||(2735031-2735171)
chr6 (89-169)||(31813179-31813259)
chr6 (89-227)||(9093528-9093664)
chr6 (85-168)||(9912159-9912242)
chr6 (135-212)||(837234-837309)
chr6 (85-194)||(24982700-24982807)
chr6 (87-191)||(31624088-31624190)
chr6 (135-194)||(835267-835324)
chr6 (85-153)||(848023-848091)
chr6 (85-227)||(6016343-6016483)
chr6 (156-210)||(11784069-11784121)
chr6 (87-150)||(19411519-19411582)
chr6 (130-207)||(6536597-6536672)
chr6 (86-207)||(35099019-35099137)
chr6 (89-189)||(2455259-2455357)
chr6 (172-213)||(6909925-6909966)
chr6 (89-122)||(9559511-9559544)
chr6 (85-163)||(2455015-2455090)
chr6 (143-210)||(8201212-8201277)
chr6 (103-182)||(9763567-9763644)
chr6 (158-213)||(24626271-24626324)
chr6 (85-121)||(27857423-27857459)
chr6 (87-159)||(34430743-34430815)
[»] scaffold0221 (1 HSPs)
scaffold0221 (106-228)||(22192-22312)
[»] scaffold0103 (1 HSPs)
scaffold0103 (110-159)||(52005-52054)
[»] scaffold0057 (1 HSPs)
scaffold0057 (85-133)||(24675-24723)


Alignment Details
Target: chr4 (Bit Score: 273; Significance: 1e-152; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 11 - 312
Target Start/End: Complemental strand, 55065011 - 55064714
Alignment:
Q  11 ttatactccaatagtaccagtctatcaaataagcatacaatttagtacatcaaagcacaaggcgggactgcgatactgtttgggagaacttttgaaaaca 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  55065011 ttatactccaatagtaccagtctatcaaataagcatacaatttagtacatcaaagcacaaagcgggactgcgatactgtttgggagaacttttgaaaaca 55064912  T
Q  111 acttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaa 210  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  55064911 acttatgacatttttcaatagcttttttcatcttattttcataagttctccaagataacatttatgaaaacagcatatagcatacacaaaaacaatttaa 55064812  T
Q  211 cttcattatatcatttgcaacaaaattgtatatatgcttatttgttcaaattccgctacactatagccgctatatatgatggagactacatatgtattga 310  Q
    ||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55064811 cttcattatatcatttgcaacaaaattg----tatgcttatttgttcaaattccgctacactatagccgctatatatgatggagactacatatgtattga 55064716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 17822841 - 17822959
Alignment:
Q  93 ggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagca 192  Q
    ||||||| | |||||||| ||||||||||||||||  ||||||||| | |||||||||||| |||||||||||||||  ||||||||||| | |||||||    
T  17822841 ggagaacatatgaaaacagcttatgacatttttcataagctttttttagcttattttcataagttctccaagatagc--ttatgaaaacaacttatagca 17822938  T
Q  193 tacacaaaaacaatttaactt 213  Q
    || | || |||||||||||||    
T  17822939 tataaaataacaatttaactt 17822959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 103 - 222
Target Start/End: Original strand, 55414406 - 55414523
Alignment:
Q  103 tgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaa 202  Q
    |||||||| ||||||||||||||||  ||||||||||| |||||||||||| |||||||||||||  | |||||||||||   |||||||||  ||||||    
T  55414406 tgaaaacagcttatgacatttttcataagcttttttcaacttattttcataagttctccaagata--acttatgaaaacaatttatagcatatgcaaaaa 55414503  T
Q  203 caatttaacttcattatatc 222  Q
     || ||||||| ||| ||||    
T  55414504 aaaattaactttattttatc 55414523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 2244153 - 2244044
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||||||||||| |||| |||||| ||||||||| | ||||  | ||||||||| |||||||||||| ||||||||| ||||| | ||| |||||| |    
T  2244153 actgtttgggagaatttttaaaaacagcttatgacaatattcataaacttttttcaccttattttcataagttctccaatatagcttatattaaaacaac 2244054  T
Q  185 atatagcata 194  Q
     |||||||||    
T  2244053 ttatagcata 2244044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 13126544 - 13126628
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||||| ||||||| | |||||| |||||||||||| |||  ||||||||||| |||||||||||| |||||| ||||||||    
T  13126544 actgtttggaagaacttataaaaacagcttatgacatttatcataagcttttttcagcttattttcataagttctcgaagatagc 13126628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 50681057 - 50681181
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||||| |||||||| ||||||||  | |||||| ||||||  |||||||||||  |||||||||||  |||||||| |||||  ||||  ||||| |    
T  50681057 actgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttcaatttattttcataatttctccaatatagc--ttatataaacaac 50681154  T
Q  185 atatagcatacacaaaaacaatttaac 211  Q
     ||||||||| ||||||||||||||||    
T  50681155 ttatagcatatacaaaaacaatttaac 50681181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 25904191 - 25904269
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    ||||||||||||| ||| |||||||| |||||| |||||||||  ||||||||||| |||||||| ||| |||||||||    
T  25904191 actgtttgggagagcttatgaaaacagcttatgccatttttcataagcttttttcagcttatttttataagttctccaa 25904269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 35571602 - 35571725
Alignment:
Q  88 gtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcata 187  Q
    |||||||||||||||| |||||| ||||| ||| | ||||  ||||  ||||| |||||||||| | |||||| ||||||||  ||||||||||||| ||    
T  35571602 gtttgggagaacttttaaaaacagcttattacactgttcatgagctggtttcaacttattttcacaagttctctaagatagc--ttatgaaaacagctta 35571699  T
Q  188 tagcatacacaaaaacaatttaactt 213  Q
    |||| || || |||||||| ||||||    
T  35571700 tagcttatacgaaaacaatataactt 35571725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 210
Target Start/End: Original strand, 53294082 - 53294205
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||||| ||||  ||||||||| ||||||   ||||||| |||| |||||| ||| |||||||| |||||| || ||||  ||||| |||||| |    
T  53294082 actgtttgggaaaactcatgaaaacaaattatgatggttttcaaaagctattttcagcttgttttcataagttctctaatatag--tttataaaaacaac 53294179  T
Q  185 atatagcatacacaaaaacaatttaa 210  Q
     ||||||||| |||||||||||||||    
T  53294180 ttatagcatatacaaaaacaatttaa 53294205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 208
Target Start/End: Complemental strand, 2996674 - 2996554
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||||| |||| ||| ||||||||||||||||||| |  ||  ||||||||||| |||||||||||| | |||||||||||||  ||||||||||| |    
T  2996674 actgtttgagagagcttatgaaaacaacttatgacatgtc-cataagcttttttcaacttattttcatacgctctccaagatagc--ttatgaaaacaac 2996578  T
Q  185 atatagcatacacaaaaacaattt 208  Q
     |||| | || | |||||||||||    
T  2996577 ttataacttatataaaaacaattt 2996554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 24169361 - 24169281
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    |||| |||||||||| |||| | ||||||||||||||||  || |||||||| |||||||||||| | |||||||||||||    
T  24169361 tttgagagaacttttaaaaatagcttatgacatttttcataagattttttcaacttattttcataagctctccaagatagc 24169281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 221
Target Start/End: Original strand, 7839347 - 7839463
Alignment:
Q  103 tgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaa 202  Q
    |||||||||||||||||| ||||||  ||||||||||| ||||||||| || ||||| |||  ||||  |||| ||||||   ||||||||| |||||||    
T  7839347 tgaaaacaacttatgacaattttcataagcttttttcaacttattttcgtaagttcttcaatctagc--ttataaaaacaatttatagcatatacaaaaa 7839444  T
Q  203 caatttaacttcattatat 221  Q
    |||||| || ||| |||||    
T  7839445 caatttcacatcaatatat 7839463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 21731626 - 21731742
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcat 186  Q
    ||||||||||||||| |||||||| ||||| ||| ||||||  | ||||||||| |||| |||||||  |||||||| |||||  |||| |||||| | |    
T  21731626 tgtttgggagaacttatgaaaacagcttatcacaattttcataaacttttttcaacttactttcataaattctccaatatagc--ttataaaaacaactt 21731723  T
Q  187 atagcatacacaaaaacaa 205  Q
    |||||| | ||||||||||    
T  21731724 atagcacatacaaaaacaa 21731742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 22030301 - 22030230
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctc 160  Q
    ||||||||||||| |||||||| ||||||||| ||||||| ||||||| |||  ||||||||||| ||||||    
T  22030301 tttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttctcaggttattttcataagttctc 22030230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 54426145 - 54426062
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatag 168  Q
    |||| ||||||||||||  ||||||| ||||||||| ||||||  |||||||||||  ||||||||||| ||||||||| ||||    
T  54426145 actgcttgggagaacttaggaaaacagcttatgacaattttcataagcttttttcaagttattttcataagttctccaatatag 54426062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 212
Target Start/End: Complemental strand, 1408040 - 1407933
Alignment:
Q  104 gaaaacaacttatgacatttttcaatagct-tttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaa 202  Q
    ||||||| ||||||||||||||||  |||| ||||||| ||||| ||||||  || ||| |||||||  ||||||||||||| |  ||| ||||||||||    
T  1408040 gaaaacagcttatgacatttttcataagctgtttttcagcttatcttcataaattttcctagatagc--ttatgaaaacagcttgcagcttacacaaaaa 1407943  T
Q  203 caatttaact 212  Q
    ||||||||||    
T  1407942 caatttaact 1407933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 25332873 - 25332746
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttct-ccaagatagcatttatgaaaacagcata 187  Q
    |||||||||||||  |||||||||||||| |||| ||||  || | |||||| |||||||||||| |||||   ||||||||  |||| |||| ||| ||    
T  25332873 tttgggagaacttgcgaaaacaacttatggcattattcataagttgttttcagcttattttcataagttctgataagatagc--ttataaaaatagctta 25332776  T
Q  188 tagcatacacaaaaacaatttaacttcatt 217  Q
     ||| || ||||||||||||||||||||||    
T  25332775 gagcttatacaaaaacaatttaacttcatt 25332746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 18425882 - 18425773
Alignment:
Q  117 gacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcat 216  Q
    |||||||||||  |||||||| || |||||||| |||||||||||||||| ||  || ||||||||   |||| |||  |||||||||||||||||| ||    
T  18425882 gacatttttcataagctttttccaacttatttttatatgttctccaagatggc--ttttgaaaacattttataacatgtacaaaaacaatttaactttat 18425785  T
Q  217 tatatcatttgc 228  Q
    | || |||||||    
T  18425784 tttaccatttgc 18425773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 21523659 - 21523592
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcata 153  Q
    ||||||||| |||| || |||||||||||||||||||||||||  ||| ||||||| ||||||||||||    
T  21523659 actgtttggaagaatttatgaaaacaacttatgacatttttcataagc-tttttcagcttattttcata 21523592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 41512726 - 41512633
Alignment:
Q  112 cttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatt 207  Q
    ||||| ||| ||||||  ||||||| |||||||||||||||| ||||| | ||| |||  ||||||||||| | |||||||||| |||||||||||    
T  41512726 cttataacacttttcataagcttttatcatcttattttcataagttcttccagaaagc--ttatgaaaacaacttatagcatacgcaaaaacaatt 41512633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 16200006 - 16200066
Alignment:
Q  142 cttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaaca 204  Q
    |||||||||||| || ||||||||||||  ||||||||||||| ||||||||| |||||||||    
T  16200006 cttattttcataagtcctccaagatagc--ttatgaaaacagcttatagcatatacaaaaaca 16200066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 222
Target Start/End: Complemental strand, 20109108 - 20108976
Alignment:
Q  88 gtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcata 187  Q
    |||||||||||||| |||||||| ||| ||| |  |||||  ||||||||||  || ||||||| | |||||| || ||| |  |||| |||||||| ||    
T  20109108 gtttgggagaacttatgaaaacaccttgtgaaaaatttcacaagcttttttcgactcattttcaaaagttctctaatatatc--ttataaaaacagctta 20109011  T
Q  188 tagcatacacaaaaacaatttaacttcattatatc 222  Q
    || |||| |||||||||| ||||||||||| ||||    
T  20109010 taccatatacaaaaacaacttaacttcattttatc 20108976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 29913055 - 29912956
Alignment:
Q  79 tgcgatactgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaa 178  Q
    ||||| ||||||||||||||||| |||||| | ||| |||||||||||  ||| | |||||| |||||||| ||| ||| |||||||||||  |||||||    
T  29913055 tgcgaaactgtttgggagaacttatgaaaatagctt-tgacatttttccttagttcttttcagcttatttttataagttgtccaagatagc--ttatgaa 29912959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 54069385 - 54069509
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||| || | ||||||||||| ||||  ||| ||||||  |||| |||| | |||||||||||||||||| ||| |||  | |||| ||||||      
T  54069385 actgtttggtaggatttttgaaaacagcttacaacaattttcataagctgtttttaacttattttcatatgttcttcaatata--acttataaaaacaaa 54069482  T
Q  185 atatagcatacacaaaaacaatttaac 211  Q
     ||||||||| ||||||||||||||||    
T  54069483 ttatagcatatacaaaaacaatttaac 54069509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 228
Target Start/End: Complemental strand, 55302330 - 55302210
Alignment:
Q  106 aaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaa 205  Q
    ||||| ||||||||| |||||   ||||||||||| |||||||||||| ||| ||||| |||||  |||||| |||||| ||||| ||| ||||| | ||    
T  55302330 aaacagcttatgacaattttcgtaagcttttttcagcttattttcataagttttccaacatagc--ttatgataacagcttatagtatatacaaagataa 55302233  T
Q  206 tttaacttcattatatcatttgc 228  Q
    ||||| || ||| || |||||||    
T  55302232 tttaatttaattttaccatttgc 55302210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 3069941 - 3070067
Alignment:
Q  85 actgtttgggagaactttt-gaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacag 183  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||  ||||||||||| |||| |||  ||  || |||||||||  | ||||||||||||    
T  3069941 actgtttgggtgaactttttgaaaacatcttatgacatttttcataagcttttttcaacttaattttgta-attttccaagata--acttatgaaaacag 3070037  T
Q  184 catatagcatacacaaaaacaatttaactt 213  Q
    | | ||||||  || ||||||| |||||||    
T  3070038 cttgtagcatgtaccaaaacaagttaactt 3070067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 3155655 - 3155564
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
    |||||| |||||||||||  ||||| ||||||||  |||||||||||||| | |||| |  |||||||||||||||||| ||| |||| |||||    
T  3155655 ttttcagcttattttcattagttcttcaagatag--tttatgaaaacagcttgtagcttgtacaaaaacaatttaactttattttatcttttgc 3155564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 26590338 - 26590416
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    |||| |||| |||| || ||||||||| ||||||||  |||||| |||||||||||||||| | ||||| |||||||||    
T  26590338 actgcttggaagaatttatgaaaacaatttatgacaactttcaagagcttttttcatcttactatcataagttctccaa 26590416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 29774342 - 29774227
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||| ||||||||| |||||| | |||||| |||||||  |||  |||||| | ||||||||||   |||||| |||| |||  ||||||||||||     
T  29774342 actgtttaggagaacttatgaaaatagcttatgtcattttttcataagtttttttagcttattttcaccagttctcaaagacagc--ttatgaaaacagt 29774245  T
Q  185 atatagcatacacaaaaa 202  Q
     |||||||||||||||||    
T  29774244 ttatagcatacacaaaaa 29774227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 39603138 - 39603216
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    |||||||||||||||||  ||||||| ||||||||| |||| |  ||||||||| |  ||||||||||| |||||||||    
T  39603138 actgtttgggagaacttaggaaaacagcttatgacaatttttataagctttttttaagttattttcataagttctccaa 39603216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 46588042 - 46588119
Alignment:
Q  86 ctgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    |||||||| |||||||  ||||| ||||||||||| ||||||  ||| |||| || |||||||||||| |||||||||    
T  46588042 ctgtttggtagaacttacgaaaataacttatgacaattttcataagccttttccaacttattttcataagttctccaa 46588119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 191
Target Start/End: Complemental strand, 1706721 - 1706620
Alignment:
Q  88 gtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcata 187  Q
    ||||| ||||| || |||||||| |||||| |||| ||||  |||| ||| || |||||||||||| | | ||||||||||  |||||||||||||| ||    
T  1706721 gtttgagagaaattatgaaaacagcttatggcattgttcataagctatttccaacttattttcataagctgtccaagatag--tttatgaaaacagctta 1706624  T
Q  188 tagc 191  Q
    ||||    
T  1706623 tagc 1706620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 42685469 - 42685385
Alignment:
Q  142 cttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
    |||||||||| | ||||||||| |||||  ||||||||||| | || ||| || | |||||||||||||||||||| |||| |||||    
T  42685469 cttattttcacacgttctccaaaatagc--ttatgaaaacaacttagagcttataaaaaaacaatttaacttcattttatcttttgc 42685385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 49803297 - 49803230
Alignment:
Q  98 acttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaaga 165  Q
    |||| ||||| |||||||||||||| |||| ||||| |||||| |||||| || || |||||||||||    
T  49803297 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaagttctccaaga 49803230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 52746893 - 52746948
Alignment:
Q  172 ttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatcatttg 227  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||| |||| ||||    
T  52746893 ttatgaaaacagcttatggcttacacaaaaacaatttaactttattttatcttttg 52746948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 54392837 - 54392913
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaactt 213  Q
    |||||| |||||||||| |  |||||||||||| |  |||| ||||||||  |||||||| ||||||||||||||||||    
T  54392837 ttttcaacttattttcaaaatttctccaagatatc--ttattaaaacagctaatagcatatacaaaaacaatttaactt 54392913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 56480392 - 56480324
Alignment:
Q  143 ttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaactt 213  Q
    ||||||||||| | ||||||||||||  |||||||||||||| |||| | || ||| ||||||||||||||    
T  56480392 ttattttcataagctctccaagatag--tttatgaaaacagcttataacttatacataaacaatttaactt 56480324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 20109678 - 20109612
Alignment:
Q  94 gagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctc 160  Q
    ||||||||||||||||| ||||||||||||||||  || |||||||  || ||||| ||| ||||||    
T  20109678 gagaacttttgaaaacagcttatgacatttttcataagtttttttctgctgatttttataagttctc 20109612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 27043855 - 27043938
Alignment:
Q  142 cttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatcatttg 227  Q
    ||||| |||||| ||||||||||||||  ||||| |||||| | |||||| || || ||||||||||||||| ||| |||| ||||    
T  27043855 cttatattcatacgttctccaagatag--tttataaaaacatcttatagcttatacgaaaacaatttaactttattttatcctttg 27043938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 51630163 - 51630072
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
    |||||| ||||||||||||  |||| |||||||||  ||||||||| ||| |||||| || |  ||||||||||||||| ||| |||| |||||    
T  51630163 ttttcagcttattttcataaattcttcaagatagc--ttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatcttttgc 51630072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 46592178 - 46592255
Alignment:
Q  86 ctgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    |||||||| |||||||   |||| ||||||||||| ||||||  ||| |||| || |||||||||||| |||||||||    
T  46592178 ctgtttggaagaacttacaaaaataacttatgacaattttcataagccttttccaacttattttcataagttctccaa 46592255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 25885876 - 25885820
Alignment:
Q  172 ttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
    ||||||||||| | |||||| ||||| ||||||||||||||| ||| |||| |||||    
T  25885876 ttatgaaaacaacttatagcttacacgaaaacaatttaactttattttatcttttgc 25885820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 31642294 - 31642258
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacat 121  Q
    |||||||| |||||||| |||||||||||||||||||    
T  31642294 actgtttgagagaacttatgaaaacaacttatgacat 31642258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 6e-34; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 24915020 - 24915154
Alignment:
Q  86 ctgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagca 185  Q
    |||||||||| || || |||||||||||||||||||||||||  ||||||||||| |||||||||| | ||||||||||| |||  |||||||||||||     
T  24915020 ctgtttgggacaatttatgaaaacaacttatgacatttttcataagcttttttcaacttattttcacaagttctccaagacagc--ttatgaaaacagct 24915117  T
Q  186 tatagcatacacaaaaacaatttaacttcattatatc 222  Q
    ||||||||| |||||||||||||||||| ||| ||||    
T  24915118 tatagcatatacaaaaacaatttaactttattttatc 24915154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 37473503 - 37473423
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagata 167  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| || |||||||||||| |||||||||||||    
T  37473503 tgtttgggagaacttttgaaaacaacttatgacatttttcataagctttttccagcttattttcataagttctccaagata 37473423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 3233983 - 3234107
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||| |||||||||| |||||||||||||| ||| ||||||  || |||||||  |||||||||||| ||||||||| |||||  |||| |||||| |    
T  3233983 actgttagggagaacttatgaaaacaacttataacagttttcataagtttttttctacttattttcataagttctccaatatagc--ttataaaaacaac 3234080  T
Q  185 atatagcatacacaaaaacaatttaac 211  Q
     ||||||||| ||||||||||||||||    
T  3234081 ttatagcatatacaaaaacaatttaac 3234107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 41195159 - 41195287
Alignment:
Q  82 gatactgtttgggagaacttttgaaaacaacttatgacatttttcaata-gcttttttcatcttattttcatatgttctccaagatagcatttatgaaaa 180  Q
    ||||||||||||||||||||||  ||| | |||||||||||||  |||| |||||||||| |||||||||||| ||||||||||||||  ||||||||||    
T  41195159 gatactgtttgggagaacttttataaatagcttatgacatttt--aataagcttttttcagcttattttcataagttctccaagatag--tttatgaaaa 41195254  T
Q  181 cagcatatagcatacacaaaaacaatttaactt 213  Q
    |||   |||| ||| ||||||||| ||||||||    
T  41195255 cagttgatagtatatacaaaaacagtttaactt 41195287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 49938847 - 49938734
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcat 186  Q
    ||||||||||||||| |||||||| ||||||||| ||||||| ||||||||||| |||||||||||| |||||| || |||||  |||| |||||| | |    
T  49938847 tgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttttcaacttattttcataagttctctaatatagc--ttataaaaacaactt 49938750  T
Q  187 atagcatacacaaaaa 202  Q
    ||| |||| |||||||    
T  49938749 ataacatatacaaaaa 49938734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 222
Target Start/End: Original strand, 14576622 - 14576756
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||||| ||||| |||||||| ||||||||| ||||||| ||||||||||| |||||||||| | |||||| || |||||  |||| |||| |      
T  14576622 actgtttgggacaacttgtgaaaacagcttatgacaattttcaaaagcttttttcagcttattttca-aagttctctaatatagc--ttataaaaaaaaa 14576718  T
Q  185 atatagcatacacaaaaacaatttaacttcattatatc 222  Q
     ||||||||| |||||||||||||||||| ||| ||||    
T  14576719 ttatagcatatacaaaaacaatttaactttattttatc 14576756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 37631539 - 37631662
Alignment:
Q  97 aacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcataca 196  Q
    ||||| |||||||| ||| ||||| ||||||  ||||||||||| |||||||||||| ||||||||| |||||  |||  ||||||||  ||| ||||||    
T  37631539 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaatatagc--ttacaaaaacagctaatatcataca 37631636  T
Q  197 caaaaacaatttaacttcattatatc 222  Q
    ||||||||||||| ||||||| ||||    
T  37631637 caaaaacaatttagcttcattttatc 37631662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 473261 - 473140
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatat 188  Q
    ||||||||||||| |||||| | ||||| ||| ||||||  ||||||||||| |||||||||||| |||||||||  ||| | |||| |||||| | |||    
T  473261 tttgggagaacttatgaaaaaagcttat-acaattttcataagcttttttcaacttattttcataagttctccaa--tagaacttataaaaacaacttat 473165  T
Q  189 agcatacacaaaaacaatttaactt 213  Q
    ||||||||| |||||||||||||||    
T  473164 agcatacacgaaaacaatttaactt 473140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 40977375 - 40977446
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctc 160  Q
    ||||||||||||| ||||||||| |||||||| ||||||| |||||||| || |||||||||||||||||||    
T  40977375 tttgggagaacttatgaaaacaatttatgacaattttcaaaagctttttccagcttattttcatatgttctc 40977446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 211
Target Start/End: Original strand, 17603359 - 17603476
Alignment:
Q  92 gggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagc 191  Q
    ||||||||||  ||||||| ||||||||| ||||||  | |||||| || |||||||||| | ||||||||| |||||  |||| |||||| | ||||||    
T  17603359 gggagaacttacgaaaacagcttatgacaattttcataaactttttacaacttattttcagaagttctccaatatagc--ttataaaaacaacttatagc 17603456  T
Q  192 atacacaaaaacaatttaac 211  Q
    ||| ||||||||||||||||    
T  17603457 atatacaaaaacaatttaac 17603476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 210
Target Start/End: Original strand, 27970259 - 27970386
Alignment:
Q  82 gatactgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctcc-aagatagcatttatgaaaa 180  Q
    |||||| ||||||||||||| | |||||   |||||||||||||||  |||||||||||  ||||||||||| |||| || || ||||  |||||| |||    
T  27970259 gatactctttgggagaacttataaaaacggtttatgacatttttcataagcttttttcagtttattttcataagttccccaaaaatag--tttatggaaa 27970356  T
Q  181 cagcatatagcatacacaaaaacaatttaa 210  Q
    || | ||||||||| |||||||||||||||    
T  27970357 caacttatagcatatacaaaaacaatttaa 27970386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 27976694 - 27976571
Alignment:
Q  97 aacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttca---------tatgttctccaagatagcatttatgaaaacagcata 187  Q
    |||||||||||| | ||||||||||||||||  ||||||||||| ||||||||||         || |||||| ||||||||  ||||||||||| | ||    
T  27976694 aacttttgaaaatagcttatgacatttttcataagcttttttcagcttattttcattatttcattaagttctcgaagatagc--ttatgaaaacaactta 27976597  T
Q  188 tagcatacacaaaaacaatttaactt 213  Q
    ||||||| ||||||||||||||||||    
T  27976596 tagcatatacaaaaacaatttaactt 27976571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 208
Target Start/End: Original strand, 51929509 - 51929628
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcat 186  Q
    |||||||||||| |  |||||||| ||||||||| ||||||  ||||||||||| ||||||| |||| ||||||||| ||||  ||||| |||||||| |    
T  51929509 tgtttgggagaattcatgaaaacagcttatgacaattttcataagcttttttcaacttatttccataagttctccaatatag--tttataaaaacagctt 51929606  T
Q  187 atagcatacacaaaaacaattt 208  Q
    |  ||||| | |||||||||||    
T  51929607 aaggcatatataaaaacaattt 51929628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 228
Target Start/End: Complemental strand, 13810091 - 13809959
Alignment:
Q  94 gagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcat 193  Q
    |||||||| |||| |||  |||||||| ||||||| || |||| | | |||||||||| | |||||| || ||||  ||||| ||||||  |||||||||    
T  13810091 gagaacttatgaatacagtttatgacaattttcaaaagtttttcttagcttattttcacaagttctctaatatag--tttataaaaacaatatatagcat 13809994  T
Q  194 acacaaaaacaatttaacttcattatatcatttgc 228  Q
    | |||||||||||||||||| ||| |||| |||||    
T  13809993 atacaaaaacaatttaactttattttatcttttgc 13809959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 15477663 - 15477592
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctc 160  Q
    |||| |||||||| |||||||| ||||||||| ||||||| ||||||||||| ||||| |||||| ||||||    
T  15477663 tttgtgagaacttatgaaaacagcttatgacaattttcaaaagcttttttcagcttatattcataagttctc 15477592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 27820332 - 27820427
Alignment:
Q  112 cttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaattta 209  Q
    |||| |||||| ||||  |||| |||||| ||||||||||||  ||||||||||||||  |||| ||||||||||||||| || ||| ||||||||||    
T  27820332 cttacgacattgttcataagctattttcagcttattttcataaattctccaagatagc--ttataaaaacagcatatagcttatacataaacaattta 27820427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 159
Target Start/End: Complemental strand, 29904853 - 29904779
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttct 159  Q
    |||||||| |||||||| | |||||| |||||| || ||||||| ||||||||||| |||||||||||| |||||    
T  29904853 actgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttcaccttattttcataagttct 29904779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 182
Target Start/End: Original strand, 51695463 - 51695558
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaaca 182  Q
    ||||||||| ||||||| |  ||||||||||| ||||| ||||  |||| |||||| ||||||||||||  ||||||||||||||  |||||||||||    
T  51695463 actgtttggaagaacttatataaacaacttatcacattgttcataagctattttcagcttattttcataaattctccaagatagc--ttatgaaaaca 51695558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 7472363 - 7472274
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatcatttg 227  Q
    |||||| |||||||||||| | |||||||||||||  ||||| ||||||| |||||  || |||||||||||||||||| |||||||| ||||    
T  7472363 ttttcagcttattttcataagctctccaagatagc--ttatggaaacagcttatagattatacaaaaacaatttaactt-attatatcttttg 7472274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 2294968 - 2294887
Alignment:
Q  130 agcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaactt 213  Q
    |||| |||||| ||||||||| || ||||||||||||||  |||||||||| ||| |||||| ||  |||||||||||||||||    
T  2294968 agctgttttcaccttattttcgtaagttctccaagatag--tttatgaaaatagcttatagcttatccaaaaacaatttaactt 2294887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 210
Target Start/End: Complemental strand, 2295198 - 2295078
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||  |||| | |||| |||||||||| | ||||||  | |||||  |||| |||| |||    
T  2295198 actgtttgggagaacttatgaaaacagcttatgacaattttcataagctctattcaacttattttcacaagttctctgatatagc--ttataaaaatagc 2295101  T
Q  185 atatagcatacacaaaaacaatttaa 210  Q
       ||||||| |||||||||||||||    
T  2295100 ---tagcatatacaaaaacaatttaa 2295078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 3887601 - 3887676
Alignment:
Q  86 ctgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctcc 161  Q
    |||||||| ||||||| |||||||| ||||||||||| ||||  |||| |||| | |||||||||||| |||||||    
T  3887601 ctgtttggaagaacttatgaaaacatcttatgacattgttcataagctgtttttaacttattttcataagttctcc 3887676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 10744399 - 10744300
Alignment:
Q  88 gtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcata 187  Q
    |||||||||||||| |||||||| |||||| || | ||||  |||| ||||||||||||||| ||| |||||| |||| |||  ||||||||||||| ||    
T  10744399 gtttgggagaacttgtgaaaacagcttatggca-tgttcataagctgttttcatcttatttttataagttctctaagacagc--ttatgaaaacagctta 10744303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 31517709 - 31517848
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||||||||||| | ||||||||| |||||| | ||||  |||| |||||| |||||||||||| | ||||||||| ||   ||||||| |||||    
T  31517709 actgtttgggagaacttatcaaaacaactcatgaca-tgttcataagctgttttcagcttattttcataagctctccaagacag--attatgaagacagc 31517805  T
Q  185 atatagcatacacaaaaacaatttaacttcattatatcatttg 227  Q
     |||||| || |  ||| ||||||||||| ||| |||| ||||    
T  31517806 ttatagcttatatgaaatcaatttaactttattttatcttttg 31517848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 3069971 - 3070038
Alignment:
Q  154 tgttctccaagatagcatttatgaaaacagcatatagcatacac-aaaaacaatttaacttcattatatc 222  Q
    ||||||||||||||||  ||| ||||||||| ||||||||| || |||||||||||||||||||| ||||    
T  3069971 tgttctccaagatagc--ttacgaaaacagcttatagcatatacgaaaaacaatttaacttcattttatc 3070038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 38018332 - 38018458
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||| |||||| ||||| ||||| ||  ||| |||||| |||| ||| | |||||| |||||||||||   ||||||||||||  || ||||||||||||    
T  38018332 actggttgggaaaacttatgaaagcagattaggacattgttcattaggtattttcagcttattttcatgaattctccaagata--atgtatgaaaacagc 38018429  T
Q  185 atatagcatacacaaaaacaatttaactt 213  Q
     | |||| || || |||||||||||||||    
T  38018430 ttctagcttatacgaaaacaatttaactt 38018458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 7137016 - 7137069
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatag 190  Q
    |||||| |||||||||||| |||||||||||||||  ||||||||||||| |||||    
T  7137016 ttttcagcttattttcataagttctccaagatagc--ttatgaaaacagcttatag 7137069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 7941708 - 7941632
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctcc 161  Q
    ||||||||| |||| || |||||||| ||||||||||| |||   |||| |||||| |||||||||||| |||||||    
T  7941708 actgtttggaagaatttatgaaaacagcttatgacattgttccgaagctattttcaacttattttcataagttctcc 7941632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 34290288 - 34290203
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatc 222  Q
    |||||| |||||||||||| ||||| |||||||||  ||||||||||||| |||||| || ||||||  || ||||||| ||| ||||    
T  34290288 ttttcagcttattttcataagttcttcaagatagc--ttatgaaaacagcttatagcttatacaaaataaaattaactttattttatc 34290203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 120
Target Start/End: Complemental strand, 5741708 - 5741673
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgaca 120  Q
    ||||||||||||||||| ||||||||||||||||||    
T  5741708 actgtttgggagaacttatgaaaacaacttatgaca 5741673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 38503442 - 38503517
Alignment:
Q  94 gagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    |||||||| || ||||| | ||||||||| ||||  || | |||||| |||||||||||| |||||||||||||||    
T  38503442 gagaacttatggaaacagcctatgacattgttcataagttgttttcagcttattttcataagttctccaagatagc 38503517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 43990355 - 43990275
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacattttt---caatagcttttttcatcttatttt-catatgttctccaagat 166  Q
    ||||||||||| |||||||||| ||||||||||||||   |||||  |||||||| |||||||| |||| ||||||||||||    
T  43990355 tttgggagaacgtttgaaaacagcttatgacattttttcacaata-tttttttcagcttattttgcataagttctccaagat 43990275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 182
Target Start/End: Complemental strand, 601141 - 601046
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaaca 182  Q
    ||||||||||||||  |  |||||||||||||||||| ||  ||  ||| |||||| ||||||||||||   |||||| |||||||| ||||||||||    
T  601141 actgtttgggagaatctaagaaaacaacttatgacatgttgtaa--gctattttcagcttattttcataaactctccaggatagcatatatgaaaaca 601046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 14332083 - 14331970
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||| ||| |||||| ||||||||| |||||||| ||| |  |||||||||||| |||| ||||| | || |||||||||||||||  || ||||| |    
T  14332083 actgttcgggtgaacttatgaaaacaaattatgacacttt-cgttagcttttttcagcttaatttcaaa-gtcctccaagatagcatt--tggaaacaac 14331988  T
Q  185 atatagcatacacaaaaa 202  Q
     ||||||||| |||||||    
T  14331987 ttatagcatatacaaaaa 14331970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 27145708 - 27145785
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagata 167  Q
    ||||| |||||||  |||||| |||||||||||| ||||  || |||||||| |||||||||||| ||||| |||||||    
T  27145708 tttggaagaacttaagaaaacgacttatgacattgttcataag-ttttttcagcttattttcataagttcttcaagata 27145785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 36514644 - 36514726
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagata 167  Q
    |||||| |||||||||| |||||| ||||||||||||| || |  |||| |||||| ||| |||||||| ||  |||||||||    
T  36514644 actgttagggagaacttatgaaaataacttatgacattgtttagaagctgttttcagctttttttcataagtaatccaagata 36514726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 37517144 - 37517202
Alignment:
Q  95 agaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcata 153  Q
    |||||||  ||||||| ||||||||| ||||||| |||||||||||  |||||||||||    
T  37517144 agaacttacgaaaacagcttatgacaattttcaaaagcttttttcaatttattttcata 37517202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 45975784 - 45975677
Alignment:
Q  93 ggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagca 192  Q
    ||||||| | ||||||||   ||| ||||| ||||  |||| |||||| ||||||||||||  ||||||||||||||  ||||||||||||| | ||||     
T  45975784 ggagaacatatgaaaacagtgtataacattattcataagctgttttcagcttattttcataaattctccaagatagc--ttatgaaaacagcttgtagct 45975687  T
Q  193 tacacaaaaa 202  Q
    || |||||||    
T  45975686 tatacaaaaa 45975677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 11941364 - 11941295
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatat 154  Q
    ||||||||||||| ||| |||||| | ||||| ||||| ||||  |||| |||||| |||||||||||||    
T  11941364 actgtttgggagagcttatgaaaatagcttataacattgttcataagctgttttcagcttattttcatat 11941295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 50644223 - 50644279
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgac--atttttcaatagcttttttc 139  Q
    ||||||||||||||||| ||||||||||||| |||  ||||||||  ||||||||||    
T  50644223 actgtttgggagaacttatgaaaacaacttacgacaaatttttcacaagcttttttc 50644279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 10233616 - 10233656
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacattttt 125  Q
    ||||||||| ||||||| |||||||| ||||||||||||||    
T  10233616 actgtttggaagaacttatgaaaacagcttatgacattttt 10233656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 41184628 - 41184696
Alignment:
Q  95 agaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    ||||||| |||||| | ||||||||| ||||||  || |||||||| |||||||||||| ||| |||||    
T  41184628 agaacttatgaaaatagcttatgacaattttcataagtttttttcaacttattttcataagttttccaa 41184696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 42174930 - 42174841
Alignment:
Q  112 cttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaac 203  Q
    ||||||||| ||||||  |||| |||| | |||||||||||| ||||||||| |||  | |||| |||||| | ||||||||| ||||||||    
T  42174930 cttatgacaattttcataagctgtttttaacttattttcataagttctccaatata--acttataaaaacaacttatagcatatacaaaaac 42174841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 9e-30; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 85 - 222
Target Start/End: Complemental strand, 30443995 - 30443860
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||| ||| ||| |||||||| ||||||||| ||||||  ||||||||||| |||||||||||| ||||||||| ||||  ||||| ||||||||    
T  30443995 actgtttggtagagcttatgaaaacagcttatgacaattttcacaagcttttttcagcttattttcataagttctccaatatag--tttataaaaacagc 30443898  T
Q  185 atatagcatacacaaaaacaatttaacttcattatatc 222  Q
     ||||||||| |||||| ||||||||||||||| ||||    
T  30443897 ttatagcatatacaaaagcaatttaacttcattttatc 30443860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 46778162 - 46778284
Alignment:
Q  88 gtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcata 187  Q
    |||||||||||||| |||||||||||||||||||||||||  || ||| |||| |||| ||||||| ||| ||||||||||  |||||||||||||  ||    
T  46778162 gtttgggagaacttatgaaaacaacttatgacatttttcataagttttgttcagctta-tttcataagttgtccaagatag--tttatgaaaacagttta 46778258  T
Q  188 tagcatacacaaaaacaatttaactt 213  Q
    ||||||| ||||||||||||||||||    
T  46778259 tagcataaacaaaaacaatttaactt 46778284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 20880574 - 20880452
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatat 188  Q
    ||||||||||| | |||||||| ||||||||| ||||||  ||||||||| | |||||||||||| ||||||||| ||||| ||||  |||||||  |||    
T  20880574 tttgggagaacctatgaaaacagcttatgacaattttcataagcttttttgagcttattttcataagttctccaatatagctttta--aaaacagtttat 20880477  T
Q  189 agcatacacaaaaacaatttaactt 213  Q
    |||||| ||||||||||||||||||    
T  20880476 agcatatacaaaaacaatttaactt 20880452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 21367769 - 21367643
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||  |||| |||||| |||||||||||| |||||||||||||||  ||||||||||| |    
T  21367769 actgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagc--ttatgaaaacaac 21367672  T
Q  185 atatagcatacacaaaaacaatttaactt 213  Q
     ||||   || || |||||||||||||||    
T  21367671 ttatacattatacgaaaacaatttaactt 21367643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 53789433 - 53789552
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatat 188  Q
    |||| ||||||||||| ||||| ||||||||| ||||||  ||||||||||| |||| ||||||| |||||||| ||||||  |||||| |||| | |||    
T  53789433 tttgagagaacttttggaaacagcttatgacacttttcataagcttttttcagcttaatttcataagttctccatgatagc--ttatgataacaacttat 53789530  T
Q  189 agcatacacaaaaacaatttaa 210  Q
    |||||| || |||||| |||||    
T  53789531 agcatataccaaaacattttaa 53789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 39980831 - 39980707
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||||  |||||||| |||||||| ||||||||   |||||  ||||||||||| |||||||||||| ||||||||| |||||  |||| |||||| |    
T  39980831 actgtttaagagaacttatgaaaacagcttatgactggtttcataagcttttttcaacttattttcataagttctccaatatagc--ttataaaaacaac 39980734  T
Q  185 atatagcatacacaaaaacaatttaac 211  Q
     ||||||||   |||||||||||||||    
T  39980733 ttatagcatgttcaaaaacaatttaac 39980707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 7301437 - 7301359
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagata 167  Q
    ||||||||||||||| |||||||| ||| ||||||||||  | ||||||||| |||||||||| | |||||||||||||    
T  7301437 tttgggagaacttttaaaaacaacatattacatttttcataaacttttttcaacttattttcacaagttctccaagata 7301359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 36631030 - 36631145
Alignment:
Q  96 gaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatac 195  Q
    |||||| ||||| || ||||||||  ||||||| ||||||||||  |||||||||||| ||||||||| |||||  | || |||||| | ||||||||      
T  36631030 gaacttatgaaaccagcttatgacgattttcaaaagcttttttctgcttattttcataagttctccaatatagc--tcataaaaacaacttatagcatgt 36631127  T
Q  196 acaaaaacaatttaactt 213  Q
    ||||||||||||||||||    
T  36631128 acaaaaacaatttaactt 36631145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 20170625 - 20170483
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||||||||||||||  ||||||| || |||  ||||||||  ||||||||||| |||||||||||  |||||| || |||  | || | |||||| |    
T  20170625 actgtttgggagaacttaagaaaacagctaatgggatttttcataagcttttttcaacttattttcattagttctcaaaaata--acttgtaaaaacaac 20170528  T
Q  185 atatagcatacacaaaaacaatttaacttcattatatcatttgca 229  Q
     ||||||||| |||||||||||||||| | ||| |||| ||||||    
T  20170527 ttatagcatatacaaaaacaatttaacattattttatcttttgca 20170483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 28622012 - 28622093
Alignment:
Q  130 agcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaactt 213  Q
    |||| ||||||  ||||||||||| |||||| |||||||  |||||||||||||| |||||| ||||||||||||| |||||||    
T  28622012 agctgttttcaggttattttcataagttctcgaagatag--tttatgaaaacagcttatagcttacacaaaaacaacttaactt 28622093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 902025 - 901942
Alignment:
Q  86 ctgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    |||||||||| ||||| |||||||| || || ||||||| ||  ||||||||||| |||||||||||| ||||||||| |||||    
T  902025 ctgtttgggaaaacttatgaaaacagctaataacattttccataagcttttttcaacttattttcataagttctccaatatagc 901942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 3845577 - 3845665
Alignment:
Q  132 cttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatc 222  Q
    ||||||||| |||||||||||| |||||||||||||  | ||||||||||||||| ||||||| | ||||||| || ||||| ||| ||||    
T  3845577 cttttttcagcttattttcataagttctccaagata--acttatgaaaacagcatgtagcatatagaaaaacatttcaacttaattttatc 3845665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 37689334 - 37689264
Alignment:
Q  82 gatactgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcata 153  Q
    |||||||| |||||||||||  ||||||| ||||||||| ||||||| ||||||||||| ||||||||||||    
T  37689334 gatactgtatgggagaacttaagaaaacagcttatgacaattttcaa-agcttttttcaacttattttcata 37689264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 210
Target Start/End: Original strand, 402510 - 402633
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||||||||| | |||||||| ||||||||||| ||||  |||| |||||| |||| ||||| | ||||| ||||||||   |||| ||||||||    
T  402510 actgtttgggagaacgtatgaaaacagcttatgacattgttcataagctgttttcagcttaatttcacaagttcttcaagatag--attataaaaacagc 402607  T
Q  185 atatagcatacacaaaaacaatttaa 210  Q
     |||| | || || ||||||||||||    
T  402608 ttataacttatacgaaaacaatttaa 402633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 182
Target Start/End: Original strand, 9832723 - 9832818
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaaca 182  Q
    |||||||||||||||||||||||||| |||||| | |||||||  | ||||||||| ||||| || ||| ||||| ||||| ||  ||||||||||||    
T  9832723 actgtttgggagaacttttgaaaacagcttatgccttttttcataaacttttttcaacttatatttataagttcttcaagacag--tttatgaaaaca 9832818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 47132388 - 47132310
Alignment:
Q  130 agcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaa 210  Q
    ||||||||||| ||||||||||||  |||||||| |||||  |||| |||||| | ||||||||| |||||||||||||||    
T  47132388 agcttttttcaacttattttcataacttctccaatatagc--ttataaaaacaacctatagcatatacaaaaacaatttaa 47132310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 31365156 - 31365224
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcata 153  Q
    ||||||||||||||||| ||||| || ||||||||| ||||||  ||||||||||| || |||||||||    
T  31365156 actgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttcaactcattttcata 31365224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 1217818 - 1217898
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcatt 217  Q
    ||||||||||| ||||||| |||||| | ||||||  ||||||||||||| |||| | ||||  |||||||||||||||||||    
T  1217818 ttttcatcttactttcataagttctcaaggatagc--ttatgaaaacagcttataacttacatgaaaacaatttaacttcatt 1217898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 222
Target Start/End: Original strand, 34610778 - 34610909
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatat 188  Q
    ||||||||||||| |||||||  ||||||||||| ||||  ||   |||||| || ||||||||| |||| ||||||||||  |||||||| || | |||    
T  34610778 tttgggagaacttatgaaaactgcttatgacattgttcataagtggttttcagctgattttcataagttcgccaagatagc--ttatgaaagcaacttat 34610875  T
Q  189 agcatacacaaaaacaatttaacttcattatatc 222  Q
    | | |  ||||||| |||||||||||||| ||||    
T  34610876 aacttgtacaaaaataatttaacttcattttatc 34610909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 37389278 - 37389201
Alignment:
Q  92 gggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    |||||||||| |||||||||||||||||||| |||||  |||  ||| | |||||| ||||| || ||||||||||||    
T  37389278 gggagaacttatgaaaacaacttatgacattgttcaaatgctgcttttagcttattctcataagtactccaagatagc 37389201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 226
Target Start/End: Complemental strand, 584148 - 584009
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttt-tttcatcttattttcatatgttctccaagatagcatttatgaaaacag 183  Q
    ||||||| |||||| || |||||||| |||| | || |||||| ||| ||| ||| | |||| ||||||| ||||| |||||||||  ||||||||  |     
T  584148 actgttttggagaatttatgaaaacagcttacggcagttttca-taggtttctttaagcttaatttcataagttcttcaagatagc--ttatgaaactaa 584052  T
Q  184 catatagcatacacaaaaacaatttaacttcattatatcattt 226  Q
    | ||||||||  |||||||||||||||||| ||| ||||||||    
T  584051 cttatagcatgaacaaaaacaatttaactttattttatcattt 584009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 30956659 - 30956735
Alignment:
Q  150 catatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
    |||| ||||||||||||||| |||  ||||||| | |||||| || |||||||||||||||||| ||| |||| |||||    
T  30956659 cataagttctccaagatagctttt--gaaaacaacttatagcctatacaaaaacaatttaactttattttatcttttgc 30956735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 30972471 - 30972547
Alignment:
Q  150 catatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
    |||| ||||||||||||||| |||  ||||||| | |||||| || |||||||||||||||||| ||| |||| |||||    
T  30972471 cataagttctccaagatagctttt--gaaaacaacttatagcctatacaaaaacaatttaactttattttatcttttgc 30972547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 46031092 - 46031009
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatag 168  Q
    |||||||  ||||||||  ||||||| | ||||||||| ||||  |||| |||||| |||||||| ||| ||||||||||||||    
T  46031092 actgtttcagagaacttacgaaaacagcctatgacattattcataagctgttttcagcttattttaataagttctccaagatag 46031009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 46478764 - 46478713
Alignment:
Q  112 cttatgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    ||||||||| ||||||  ||||||||||| |||||||||||| |||||||||    
T  46478764 cttatgacagttttcataagcttttttcaacttattttcataagttctccaa 46478713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 191
Target Start/End: Original strand, 50600147 - 50600250
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||| ||||||| | ||||||||| ||||||| |  ||  |||| |||||| |||||||||||| ||||||||| |||||  | |||||||||||    
T  50600147 actgtttggaagaacttataaaaacaactcatgacatgtc-cacgagctgttttcagcttattttcataagttctccaatatagc--tgatgaaaacagc 50600243  T
Q  185 atatagc 191  Q
     ||||||    
T  50600244 ttatagc 50600250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 116
Target Start/End: Original strand, 2128221 - 2128251
Alignment:
Q  86 ctgtttgggagaacttttgaaaacaacttat 116  Q
    |||||||||||||||||||||||||||||||    
T  2128221 ctgtttgggagaacttttgaaaacaacttat 2128251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 5436304 - 5436261
Alignment:
Q  142 cttattttcatatgttctccaagatagcatttatgaaaacagcata 187  Q
    |||||||||||||||||||||||||||  | |||||||||||||||    
T  5436304 cttattttcatatgttctccaagatag--tctatgaaaacagcata 5436261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 18405799 - 18405914
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||  ||||||| ||||||||  | | |||| ||||||  | ||||||  | |||| ||||||| |||||||||||||||  ||||||||||| |    
T  18405799 actgtttgcaagaacttatgaaaacagttcacgacacttttcataatctttttcaagcttaatttcataagttctccaagatagc--ttatgaaaacaac 18405896  T
Q  185 atatagcatacacaaaaa 202  Q
     ||||||||| |||||||    
T  18405897 ttatagcatatacaaaaa 18405914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 227
Target Start/End: Complemental strand, 36189642 - 36189528
Alignment:
Q  110 aacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaattta 209  Q
    ||||||||||| ||||||  ||||||| |  | ||||||||||| ||||||||| ||| |  |||| |||| ||| |||| |||| ||||||||||||||    
T  36189642 aacttatgacaattttcacaagcttttatggt-ttattttcataagttctccaatatatc--ttataaaaatagcttatatcatatacaaaaacaattta 36189546  T
Q  210 acttcattatatcatttg 227  Q
    |||| ||| |||| ||||    
T  36189545 actttattttatcttttg 36189528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 44747421 - 44747480
Alignment:
Q  130 agcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagc 191  Q
    ||||| ||||| |||||||||||| ||| |||||||||||  ||||||||||||| ||||||    
T  44747421 agcttctttcagcttattttcataagttttccaagatagc--ttatgaaaacagcttatagc 44747480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 46886718 - 46886785
Alignment:
Q  143 ttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaact 212  Q
    ||||||||| | |||||||||||||||  ||||||||||||| ||||||  | ||||||| |||||||||    
T  46886718 ttattttcaaaagttctccaagatagc--ttatgaaaacagcttatagctcatacaaaaataatttaact 46886785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 944664 - 944591
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttc 158  Q
    ||||||||||| ||||| |||||| | ||||||||| ||| ||  | ||||||||| |||| ||||||||||||    
T  944664 actgtttgggaaaacttatgaaaatagcttatgacaatttccataatcttttttcaacttactttcatatgttc 944591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 210
Target Start/End: Original strand, 13715540 - 13715665
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||| |||||||   |||||| |||||||||  |||||  ||| ||||||| |||||||||||| ||| ||||| || || | ||| |||||| |    
T  13715540 actgtttggtagaacttcctaaaacagcttatgacaactttcataagcatttttcaacttattttcataagttgtccaatatcgcttatataaaaacaac 13715639  T
Q  185 atatagcatacacaaaaacaatttaa 210  Q
     |||| |||| |||||| ||| ||||    
T  13715640 ttatatcatatacaaaatcaaattaa 13715665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 14145957 - 14145879
Alignment:
Q  142 cttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatc 222  Q
    |||||||||||| ||  |||||||||||  ||||||||| | | ||||||||| || ||||||||||||||| ||| ||||    
T  14145957 cttattttcataagtaatccaagatagc--ttatgaaaataacttatagcatatacgaaaacaatttaactttattttatc 14145879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 466295 - 466211
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||||||| |||||   |||||| ||| | |||||||||   ||||||||| | |||||||||||| ||||||||| |||||    
T  466295 actgtttgggataacttacaaaaacagcttttaacatttttcttaagctttttttagcttattttcataagttctccaacatagc 466211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 2719513 - 2719456
Alignment:
Q  142 cttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaa 201  Q
    |||||||||||| |||||||||||||||  ||||||||||||  |||||| || ||||||    
T  2719513 cttattttcataagttctccaagatagc--ttatgaaaacagtttatagcttaaacaaaa 2719456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 21574591 - 21574555
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacat 121  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  21574591 actgtttgggagagcttatgaaaacaacttatgacat 21574555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 30573885 - 30573985
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcat 186  Q
    |||||| |||||||| ||||||||| ||||| ||| || ||  |||| |||||| ||||| |||||  | |||||||||||||  ||||||||||| |||    
T  30573885 tgtttgtgagaacttatgaaaacaaattatggcatgtt-cataagctgttttcagcttatgttcatcagctctccaagatagc--ttatgaaaacatcat 30573981  T
Q  187 atag 190  Q
    ||||    
T  30573982 atag 30573985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 34707465 - 34707501
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacat 121  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  34707465 actgtttgagagaacttttgaaaacaacttgtgacat 34707501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 222
Target Start/End: Original strand, 35959454 - 35959559
Alignment:
Q  115 atgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttc 214  Q
    |||||| ||||||| ||||||||||| |||||||||| |  ||||| || |||||  ||||  ||||| | || |||||| ||||||| ||||||||||     
T  35959454 atgacaattttcaaaagcttttttcagcttattttcaaaaattctctaatatagc--ttatagaaacaacttacagcatatacaaaaataatttaacttt 35959551  T
Q  215 attatatc 222  Q
    ||| ||||    
T  35959552 attttatc 35959559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 87 - 215
Target Start/End: Complemental strand, 27028931 - 27028805
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcat 186  Q
    |||||||||||| || |||||||| |||| |||||||||||  |||| |||||| |||||||||||| | |||||||||||||  ||||||||||||| |    
T  27028931 tgtttgggagaaattctgaaaacagcttaggacatttttcataagctattttcagcttattttcataagctctccaagatagc--ttatgaaaacagctt 27028834  T
Q  187 atagcatacacaaaaacaatttaacttca 215  Q
    |||||||| ||| ||||||||||||||||    
T  27028833 atagcatatacacaaacaatttaacttca 27028805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 85 - 210
Target Start/End: Complemental strand, 26771367 - 26771244
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||| ||| ||||||| |||||||||||| |||||| || ||| |  |||| |||| |||    
T  26771367 actgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcctttttcaacttattttcataagttctctaatatatc--ttataaaaaaagc 26771270  T
Q  185 atatagcatacacaaaaacaatttaa 210  Q
     ||||||||| |||||||||||||||    
T  26771269 ttatagcatatacaaaaacaatttaa 26771244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 1058045 - 1058183
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||||||||||||||||||||||  |||||||||||||||| ||| |||||||  |||||||||||| |||||||||||||     | |||||| |||    
T  1058045 actgtttgggagaacttttgaaaactgcttatgacatttttcattag-ttttttccgcttattttcataagttctccaagata----atgtgaaaatagc 1058139  T
Q  185 atatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
     ||||||||| |||||||||  ||||||| ||| ||| ||||||    
T  1058140 ttatagcatatacaaaaacagattaactttattttatgatttgc 1058183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 85 - 217
Target Start/End: Complemental strand, 18133758 - 18133628
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||||||| ||| ||||| || ||||| ||| ||||||  ||||||||||| |||||||||||| ||||||||| ||||  ||||| ||| ||||    
T  18133758 actgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttcagcttattttcataagttctccaatatag--tttataaaaccagc 18133661  T
Q  185 atatagcatacacaaaaacaatttaacttcatt 217  Q
     ||||| ||| |||||| |||||||||||||||    
T  18133660 ttataggatatacaaaagcaatttaacttcatt 18133628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 94 - 213
Target Start/End: Complemental strand, 10114582 - 10114465
Alignment:
Q  94 gagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcat 193  Q
    |||||||| |||||||||||||| |||||| |||   ||| |||||| |||||||||||||||||||||| |||||  | ||||||||||| |||||| |    
T  10114582 gagaacttatgaaaacaacttataacatttatcatatgctgttttcagcttattttcatatgttctccaatatagc--taatgaaaacagcttatagctt 10114485  T
Q  194 acacaaaaacaatttaactt 213  Q
    | || ||||||||| |||||    
T  10114484 ataccaaaacaattcaactt 10114465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 222
Target Start/End: Original strand, 35534581 - 35534714
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||||| |||||||| |||||||| ||||||||| |||| |  ||||||||||  |||| ||||||| ||||||||| ||| |  ||||||||||| |    
T  35534581 actgtttgagagaacttgtgaaaacagcttatgacaattttaacaagcttttttcggcttactttcataagttctccaatataac--ttatgaaaacaac 35534678  T
Q  185 atatagcatacacaaaaacaatttaacttcattatatc 222  Q
    ||||| ||||||  ||||||||||||||| ||| ||||    
T  35534679 atataacataca--aaaacaatttaactttattttatc 35534714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 222
Target Start/End: Complemental strand, 29205912 - 29205775
Alignment:
Q  82 gatactgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaac 181  Q
    |||||||| || |||||||| | |||||| | ||||||||||||||  ||||||||| | || | |||||||  |||||||| ||||  ||||||||||     
T  29205912 gatactgtctgagagaacttattaaaacagcgtatgacatttttcataagcttttttaacct-actttcataaattctccaaaatag--tttatgaaaat 29205816  T
Q  182 agcatatagcatacacaaaaacaatttaacttcattatatc 222  Q
    | | ||||||||| |||||||||||||||||||||| ||||    
T  29205815 aacttatagcatatacaaaaacaatttaacttcattttatc 29205775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 30251422 - 30251540
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||||||||||||||  ||||||| |||||  |||||||||  |||||||| || |||||||||||| ||  |||||||||||  |||||||||||||    
T  30251422 actgtttgggagaacttacgaaaacagcttattgcatttttcataagctttttacagcttattttcataagtggtccaagatagc--ttatgaaaacagc 30251519  T
Q  185 atatagcatacacaaaaacaa 205  Q
     |||| |||| |||| |||||    
T  30251520 ttataacatatacaataacaa 30251540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 212
Target Start/End: Complemental strand, 10120858 - 10120733
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||||| |||||||| |||||||| |||||||||||| |||   ||| |||||| |||||||||||| ||||||||| ||||  || ||| |||||||    
T  10120858 actgtttgagagaacttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttcataagttctccaatatag--ttaatgtaaacagc 10120761  T
Q  185 atatagcatacacaaaaacaatttaact 212  Q
     |||||  || || ||||||||||||||    
T  10120760 ttataggttataccaaaacaatttaact 10120733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 31716195 - 31716279
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||  ||||||||||| |||||||  |||  ||||||||||||||    
T  31716195 actgtttcggagaacttttgaaaacagcttatgacattcttcataagcttttttcagcttatttctataacttctccaagatagc 31716279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 32840948 - 32841023
Alignment:
Q  79 tgcgatactgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatat 154  Q
    ||||| ||||||||||||||||| |||||||||||||||||||| ||||  || | |||||| |||||||||||||    
T  32840948 tgcgagactgtttgggagaacttatgaaaacaacttatgacattgttcataagttgttttcagcttattttcatat 32841023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 10758225 - 10758365
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||  |||| || |||||||| ||||||||| ||||||| ||||||||||| ||| |||||||| |||  | || |||||  |||| || ||| |    
T  10758225 actgtttgatagaatttatgaaaacagcttatgacaattttcaaaagcttttttcagcttgttttcataagtt-gctaatatagc--ttataaagacaac 10758321  T
Q  185 atatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
     ||||||||| |||||||||||||||||| ||| ||| ||||||    
T  10758322 ttatagcatatacaaaaacaatttaactttattttatgatttgc 10758365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 29168025 - 29168146
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||||||||||| | ||||||  |||||||||||||||  |   ||| ||| ||||||| |||| |||||||||||||||  | | |||||||||    
T  29168025 actgtttgggagaacttataaaaacagattatgacatttttcataaatgtttctcagcttatttccataagttctccaagatagc--tcaggaaaacagc 29168122  T
Q  185 atatagcatacacaaaaacaattt 208  Q
     ||||||||| ||||||| |||||    
T  29168123 ttatagcatatacaaaaataattt 29168146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 37353275 - 37353343
Alignment:
Q  143 ttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaactt 213  Q
    ||||||||||| | |||| ||||||||  ||| ||||||||| ||||||||||||||||||||||||||||    
T  37353275 ttattttcataagctctcaaagatagc--ttaagaaaacagcttatagcatacacaaaaacaatttaactt 37353343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 40981205 - 40981155
Alignment:
Q  86 ctgtttgggagaacttttgaaaacaacttatgacatttttcaatagctttt 136  Q
    |||||||||||||| |||||||||||||||||||||||||||  |||||||    
T  40981205 ctgtttgggagaacatttgaaaacaacttatgacatttttcataagctttt 40981155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 1930133 - 1930035
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatat 188  Q
    ||||||||||||| ||||||||  |||||||||| ||||  |||| |||||| |||||||||| | | || ||||||||||  ||||||||||||| |||    
T  1930133 tttgggagaacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttcacaaggtcaccaagatagc--ttatgaaaacagcttat 1930036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 36338256 - 36338196
Alignment:
Q  93 ggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcata 153  Q
    ||||||||| ||||||||| |||||||||||||| | |||| |||||| ||||||||||||    
T  36338256 ggagaacttgtgaaaacaatttatgacatttttccaaagctattttcagcttattttcata 36338196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 35643956 - 35644039
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatag 168  Q
    ||||||||||| ||||| |||||| |  |||||||| ||||||  ||||||||||| |||||||||||| | ||||||| ||||    
T  35643956 actgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctctccaatatag 35644039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 210
Target Start/End: Complemental strand, 38648453 - 38648330
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||||||| ||| |||||||| || |||||| || |||  ||||||||| | | || ||||||| ||||| |||||||||  ||||||||||| |    
T  38648453 actgtttgggagaccttatgaaaacagctcatgacagttctcataagcttttttaagcgtaatttcataagttctacaagatagc--ttatgaaaacaac 38648356  T
Q  185 atatagcatacacaaaaacaatttaa 210  Q
      ||| |||| |||||||||| ||||    
T  38648355 tcataacatatacaaaaacaagttaa 38648330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 13958054 - 13958091
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttt 124  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  13958054 tgtttgggagaacttttgaaaacaaattatgacatttt 13958091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 15247763 - 15247811
Alignment:
Q  103 tgaaaacaacttatgacatttttcaatagcttttttcatcttattttca 151  Q
    |||||||||||||||||||| |||| ||| |||||||| ||||||||||    
T  15247763 tgaaaacaacttatgacattgttcattagtttttttcaacttattttca 15247811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 27694974 - 27694930
Alignment:
Q  95 agaacttttgaaaacaacttatgacatttttcaatagcttttttc 139  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||    
T  27694974 agaacttttgaaaacatcttatgacaattttcattagcttttttc 27694930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 43045693 - 43045776
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatag 168  Q
    ||||||| ||||| ||| |||||||| ||||  ||| |||| |  ||||||||||| |||||||||||| ||||||||| ||||    
T  43045693 actgttttggagatcttatgaaaacagcttacaacaattttaataagcttttttcaacttattttcataagttctccaatatag 43045776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 42215275 - 42215360
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcat 171  Q
    ||||||||||||||||  |||||||| |||||||| || ||||  |||| |||||| ||||||| |||| | |||||| ||||||||    
T  42215275 actgtttgggagaactaatgaaaacagcttatgac-ttgttcataagctgttttcagcttatttacataagctctccaggatagcat 42215360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 3537047 - 3537140
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
    |||||| ||||||| |||| ||||||||||||| | | ||||| |||| | |||||| || || |||||||||| |||| ||| |||| |||||    
T  3537047 ttttcagcttatttccataagttctccaagatatcttatatgataacaacctatagcttatacgaaaacaatttgactttattttatcttttgc 3537140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 208
Target Start/End: Complemental strand, 6882029 - 6881908
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcat-cttattttcatatgttctccaagatagcatttatgaaaacag 183  Q
    ||||||||||||||| | |||||||| || |||| | |||| |  |||||||||  | |||||||||||| |||||||||  ||||  |||| |||||||    
T  6882029 actgtttgggagaacctatgaaaacagctcatgataattttaacaagctttttttttgcttattttcataagttctccaatttagc--ttat-aaaacag 6881933  T
Q  184 catatagcatacacaaaaacaattt 208  Q
    | ||||||||| | |||||||||||    
T  6881932 cttatagcatatataaaaacaattt 6881908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 28763470 - 28763417
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagctttttt 138  Q
    ||||||||||||||||| |||||||| ||||| ||| ||||||  |||||||||    
T  28763470 actgtttgggagaacttatgaaaacagcttataacaattttcataagctttttt 28763417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 41589688 - 41589639
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagctt 134  Q
    ||||||| ||||||||| |||||||||||||| ||| ||||||| |||||    
T  41589688 actgttttggagaacttatgaaaacaacttataacaattttcaaaagctt 41589639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 2487977 - 2488013
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacat 121  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  2487977 actgtttgggagaacttatgaaaacaacttataacat 2488013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 18930759 - 18930678
Alignment:
Q  130 agcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaactt 213  Q
    |||| ||||||||||||| ||||| |||||| ||||||||  ||||  ||||||  || |||||| |||| |||||||||||||    
T  18930759 agctgttttcatcttattctcataagttctcgaagatagc--ttattgaaacagtttacagcatatacaataacaatttaactt 18930678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 27493035 - 27492971
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcata 153  Q
    ||||||||| ||| ||||||||| || ||||||| ||||  |||| |||||| ||||||||||||    
T  27493035 tttgggagagcttatgaaaacaagttgtgacattgttcataagctattttcaacttattttcata 27492971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 36963322 - 36963386
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttatttt 149  Q
    |||||||||||||||||   |||||| ||| ||||| ||||||| |||||||| || ||||||||    
T  36963322 actgtttgggagaacttacaaaaacagcttttgacaattttcaaaagctttttacaacttatttt 36963386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 43504852 - 43504769
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||| ||||||||  ||||||||||||| ||| | |||  | |||| |||||| ||||||| |||| |||||||||||||||    
T  43504852 actgtttcggagaactgatgaaaacaacttacgacttgtttata-agctgttttcagcttatttccataagttctccaagatagc 43504769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 6e-28; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 88 - 228
Target Start/End: Complemental strand, 45229610 - 45229473
Alignment:
Q  88 gtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcat- 186  Q
    |||||||||||||| |||||| | |||||||||||||||| |||||||||||| |||||||||||| |||||| ||||||||  |||||||||||  ||     
T  45229610 gtttgggagaacttatgaaaagaccttatgacatttttcattagcttttttcagcttattttcataagttctcgaagatagc--ttatgaaaaca--atg 45229515  T
Q  187 atagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
    ||| |||| |||||||||||||||| ||||| |||| |||||    
T  45229514 ataacatatacaaaaacaatttaacctcattttatcgtttgc 45229473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 86 - 228
Target Start/End: Original strand, 41812061 - 41812199
Alignment:
Q  86 ctgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagca 185  Q
    ||||||||||||||||||||||||| ||||||||||||||||  ||||||||||| |||| |||| || ||| ||||||||||| |||    ||||| |     
T  41812061 ctgtttgggagaacttttgaaaacagcttatgacatttttcataagcttttttcaactta-tttcctaagttttccaagatagctttt---gaaacatct 41812156  T
Q  186 tatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
    | ||||||| |||||||||||||||||||||| || |||||||    
T  41812157 tgtagcatatacaaaaacaatttaacttcattttaccatttgc 41812199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 222
Target Start/End: Complemental strand, 41851637 - 41851502
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||| ||||||||| || || ||||||||||||||| ||||||  ||||||| ||| |||| |||||||  ||||||||||||||  || |||||||| |    
T  41851637 actgattgggagaatttatggaaacaacttatgacacttttcataagcttttctcagcttaatttcataaattctccaagatagc--ttctgaaaacaac 41851540  T
Q  185 atatagcatacacaaaaacaatttaacttcattatatc 222  Q
     ||||||||| |||||||||||||||||| ||| ||||    
T  41851539 ttatagcatatacaaaaacaatttaactttattgtatc 41851502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 33319782 - 33319906
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaata-gcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacag 183  Q
    |||||||||||||||||||  ||| | ||||||||||||   |||| |||||||||| |||||||||||| ||||||||||||||  |||||||||||||    
T  33319782 actgtttgggagaacttttataaatagcttatgacattt---aataagcttttttcagcttattttcataagttctccaagatag--tttatgaaaacag 33319876  T
Q  184 catatagcatacacaaaaacaatttaactt 213  Q
      ||||| ||| ||||||||| ||||||||    
T  33319877 tttatagtatatacaaaaacagtttaactt 33319906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 12464468 - 12464576
Alignment:
Q  112 cttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaac 211  Q
    |||| ||||| |||||  ||||||||||| |||||||||| | |||||||||||||||  ||||||||| ||| ||||||||| ||||||||||||||||    
T  12464468 cttacgacatatttcacaagcttttttcagcttattttcacaagttctccaagatagc--ttatgaaaatagcttatagcatatacaaaaacaatttaac 12464565  T
Q  212 ttcattatatc 222  Q
    || ||| ||||    
T  12464566 tttattttatc 12464576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 88 - 189
Target Start/End: Complemental strand, 16451217 - 16451118
Alignment:
Q  88 gtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcata 187  Q
    |||||||||||||| |||||||||||||||||||| ||||  |||| |||||| ||||||||||   |||||||||||||||  ||| ||||||||| ||    
T  16451217 gtttgggagaacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttcacgagttctccaagatagc--ttacgaaaacagctta 16451120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 213
Target Start/End: Complemental strand, 18066218 - 18066104
Alignment:
Q  97 aacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcataca 196  Q
    ||||| |||||||| |||||||||||  |||  |||| |||||| ||||||||| || |||||||||||||||  ||||||||||||| |||||| || |    
T  18066218 aacttatgaaaacagcttatgacattgctcataagctattttcaccttattttcttaagttctccaagatagc--ttatgaaaacagcttatagcttata 18066121  T
Q  197 caaaaacaatttaactt 213  Q
      |||||||||||||||    
T  18066120 tgaaaacaatttaactt 18066104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 4607023 - 4606943
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||||||||| |||||||||||||||||||| ||||  ||||  ||| | |||||||||||| |||||||||||||||    
T  4607023 tttgggagaacttgtgaaaacaacttatgacattgttcatgagctgcttttagcttattttcataagttctccaagatagc 4606943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 11864003 - 11863920
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatag 168  Q
    ||||||||||||||| |||||||||||||||||||||||||||  | ||||||| | |||||||| ||| ||||| ||| ||||    
T  11864003 actgtttgggagaacatttgaaaacaacttatgacatttttcataaactttttttaacttattttaataagttcttcaatatag 11863920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 15305776 - 15305698
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    ||||||||| ||||||||||| ||||||||||| || ||||||  || |||||||| |||||||||||| |||||||||    
T  15305776 actgtttggtagaacttttgacaacaacttatggcaattttcataagtttttttcaacttattttcataagttctccaa 15305698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 26626975 - 26626849
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||| |||||||||||  ||||| | ||||||||||| ||||  | || ||||||  ||||||||||| ||||| |||||||||  |||||||||||||    
T  26626975 actgtatgggagaacttacgaaaatagcttatgacattgttcataatctgttttcaggttattttcataagttctgcaagatagc--ttatgaaaacagc 26626878  T
Q  185 atatagcatacacaaaaacaatttaactt 213  Q
     | |||| || || |||||||||||||||    
T  26626877 ttctagcttatacgaaaacaatttaactt 26626849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 12289901 - 12289821
Alignment:
Q  83 atactgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    |||||||||||||||||| || ||||||  |||||||| | ||||  ||||||||||| |||||||||||| |||||||||    
T  12289901 atactgtttgggagaactattaaaaacagtttatgacaatattcataagcttttttcaacttattttcataagttctccaa 12289821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 26143608 - 26143705
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||||||||||||||  |||||||||||||| |||| ||||   | | |||||| |||||||||||| |||||||||| ||||  |||||||||||||    
T  26143608 actgtttgggagaacttacgaaaacaacttatgtcattgttcacaggttattttcagcttattttcataagttctccaagttagc--ttatgaaaacagc 26143705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 208
Target Start/End: Original strand, 43279506 - 43279616
Alignment:
Q  94 gagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcat 193  Q
    ||||| || |||||||| ||||||||| ||||||  ||||||||||| |||||||||| | ||||||||| |||||  |||| |||||| | ||||||||    
T  43279506 gagaatttatgaaaacagcttatgacaattttcataagcttttttcaacttattttcacaagttctccaatatagc--ttataaaaacaacttatagcat 43279603  T
Q  194 acacaaaaacaattt 208  Q
      |||||||||||||    
T  43279604 --acaaaaacaattt 43279616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 226
Target Start/End: Original strand, 15757626 - 15757766
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||| ||||||||| || |||||||  ||||||||| ||||||  ||||||||||| |||||||||||| ||||||    |||||  |||| || ||| |    
T  15757626 actgcttgggagaatttatgaaaactgcttatgacaattttcagaagcttttttcagcttattttcatacgttctcttgtatagc--ttataaatacaac 15757723  T
Q  185 atatagcatacac-aaaaacaatttaacttcattatatcattt 226  Q
     ||||||||| || |||||||||||||||| ||| ||||||||    
T  15757724 ttatagcatatacaaaaaacaatttaactttattttatcattt 15757766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 217
Target Start/End: Complemental strand, 40279281 - 40279169
Alignment:
Q  103 tgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaa 202  Q
    ||||||||||||||| |||| ||||  | || |||||| || ||||||||| ||||||||| |||||  ||||||||||| | |||| | || || ||||    
T  40279281 tgaaaacaacttatggcattgttcataaactattttcagctaattttcataagttctccaacatagc--ttatgaaaacaacttatatcttataccaaaa 40279184  T
Q  203 caatttaacttcatt 217  Q
    |||||||||||||||    
T  40279183 caatttaacttcatt 40279169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 3611308 - 3611202
Alignment:
Q  105 aaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaaca 204  Q
    |||||||||||||||||| ||||  | || |||| | |||||||||||| |||||||||||||||  || |||||||||  ||||   || |||||||||    
T  3611308 aaaacaacttatgacattattcataaactgtttttagcttattttcataagttctccaagatagc--ttgtgaaaacagtctataaactatacaaaaaca 3611211  T
Q  205 atttaactt 213  Q
    |||||||||    
T  3611210 atttaactt 3611202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 12195057 - 12194976
Alignment:
Q  83 atactgtttgggagaacttttgaaaacaactt-atgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    |||||||||||||||||| || |||||| ||| |||||| ||||||  ||||||||||| |||||||||| | |||||||||    
T  12195057 atactgtttgggagaactattaaaaacagctttatgacaattttcataagcttttttcaacttattttcacaagttctccaa 12194976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 13325670 - 13325597
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctc 160  Q
    |||| ||||||||||||||||||| ||||||||||||  ||  ||||||||||| || ||||||||| ||||||    
T  13325670 tgttcgggagaacttttgaaaacagcttatgacatttcacataagcttttttcagctcattttcataagttctc 13325597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 222
Target Start/End: Complemental strand, 42458032 - 42457915
Alignment:
Q  103 tgaaaacaacttatgacatttttcaatagctt-ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaa 201  Q
    |||||||||||||  ||||||| |||||  || |||||| ||||||||||||||||||| ||||||||  ||||||| |||||  | ||| || ||||||    
T  42458032 tgaaaacaacttaaaacatttt-caataagttgttttcagcttattttcatatgttctctaagatagc--ttatgaatacagctaagagcttaaacaaaa 42457936  T
Q  202 acaatttaacttcattatatc 222  Q
    |||||||||||| ||| ||||    
T  42457935 acaatttaactttattttatc 42457915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 26202108 - 26202052
Alignment:
Q  107 aacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    |||||||||||||| ||||||  ||||||||||| |||||||||||| |||||||||    
T  26202108 aacaacttatgacaattttcataagcttttttcaacttattttcataagttctccaa 26202052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 36114521 - 36114437
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||||||||||||| | ||||||||| |||| ||| ||||| |||| |||| | |||||||| ||| | |||||||||||||    
T  36114521 actgtttgggagaacttgttaaaacaactaatgaaattgttcaaaagctgtttttagcttatttttataagatctccaagatagc 36114437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 41241103 - 41241235
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcat 186  Q
    ||||||| ||||||| ||||||||| |||| || |||  ||  ||||||||||| |||| ||||| | ||| ||||||||| |  ||| ||||||  | |    
T  41241103 tgtttggtagaacttgtgaaaacaaattataacctttc-cataagcttttttcagcttaatttcacaagttttccaagataac--ttaggaaaactactt 41241199  T
Q  187 atagcatacacaaaaacaatttaacttcattatatc 222  Q
    |||||||| |||||||||||||||||||||| ||||    
T  41241200 atagcatatacaaaaacaatttaacttcattttatc 41241235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 2142756 - 2142640
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttct-ccaagatagcatttatgaaaacag 183  Q
    ||||||||||||||||| ||||||||| || ||||| | |||| ||||| |||| | ||||||||||||  |||| ||||||||  | |||||||||||     
T  2142756 actgtttgggagaacttatgaaaacaagttgtgacaatgttcattagctgtttttagcttattttcataaattctcccaagata--aattatgaaaacaa 2142659  T
Q  184 catatagcatacacaaaaa 202  Q
    | |||||| || |||||||    
T  2142658 cttatagcttatacaaaaa 2142640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 7928276 - 7928351
Alignment:
Q  95 agaacttttgaaaacaacttatg-acatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    |||||||||||||||| |||||| ||||| ||||  || | |||||| |||||||||||| |||||||||||||||    
T  7928276 agaacttttgaaaacagcttatggacattgttcataagttgttttcagcttattttcataagttctccaagatagc 7928351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 20952448 - 20952373
Alignment:
Q  94 gagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    |||||||| ||||||||  ||||| || |||||| || ||||||||| |||||||||||| ||||||||| |||||    
T  20952448 gagaacttatgaaaacagtttatgccaattttcattaacttttttcaacttattttcataagttctccaatatagc 20952373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 32592684 - 32592565
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatat 188  Q
    ||||||||||||| |||||| | |||| |||| ||||||  ||||||| ||| |||||||||||| ||||||||| || ||  |||| |||||| | |||    
T  32592684 tttgggagaacttatgaaaatagcttacgacaattttcataagcttttctcaacttattttcataagttctccaatattgc--ttataaaaacaacttat 32592587  T
Q  189 agcatacacaaaaacaatttaac 211  Q
    ||| || || |||||||||||||    
T  32592586 agcgtatac-aaaacaatttaac 32592565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 9174897 - 9174814
Alignment:
Q  105 aaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatag 190  Q
    |||||||||||||||||| ||||  |||| |||||| |||||||||||| | |||  ||||||||  ||||||||||||| |||||    
T  9174897 aaaacaacttatgacattgttcataagctattttcagcttattttcataagctctgtaagatagc--ttatgaaaacagcttatag 9174814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 31561710 - 31561792
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagata 167  Q
    ||||||||||| |||||||||||||| | |||||| |||||||  || || ||| | |||| ||||||| |||||||||||||    
T  31561710 actgtttgggaaaacttttgaaaacagcatatgacgtttttcataagattgtttaagcttactttcataagttctccaagata 31561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 449947 - 449907
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttca 127  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  449947 tgtttgggaggacttttgaaaacagcttatgacatttttca 449907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 20926577 - 20926521
Alignment:
Q  113 ttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    |||||||| |||||| |||||||||||| |||||||||||| |||||| || |||||    
T  20926577 ttatgacaattttcattagcttttttcaacttattttcataagttctctaatatagc 20926521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 42420200 - 42420260
Alignment:
Q  94 gagaacttttgaaaacaacttatgacatttttcaatagcttttttcatc-ttattttcata 153  Q
    ||||||||  ||||||||||||||||| |||||| |||||||||||| | |||||||||||    
T  42420200 gagaacttacgaaaacaacttatgacaattttcattagcttttttcaactttattttcata 42420260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 28677628 - 28677667
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttt 124  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  28677628 actgtttgggagaacttatgaaaacagcttatgacatttt 28677667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 5902518 - 5902599
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagata 167  Q
    ||||||||| ||||||| |||||||| |||||||||| || ||  | || |||||| ||| |||| |||||||||||||||||    
T  5902518 actgtttggaagaacttatgaaaacagcttatgacatgtt-cataaactgttttcagcttgtttttatatgttctccaagata 5902599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 33981212 - 33981138
Alignment:
Q  97 aacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcat 171  Q
    ||||| |||||||  |||||||||  |||||  ||||||||||| |||| |||||||  ||||||||||||||||    
T  33981212 aacttatgaaaacggcttatgacacatttcataagcttttttcaacttaatttcataaattctccaagatagcat 33981138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 182
Target Start/End: Complemental strand, 40279508 - 40279414
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaaca 182  Q
    |||||||||||||||| | ||||||||||| | ||||| | ||  | || |||||| |||||||||||| ||||||||| |||||  |||||||||||    
T  40279508 actgtttgggagaactat-gaaaacaacttttaacattgtccataaactgttttcaacttattttcataagttctccaatatagc--ttatgaaaaca 40279414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 42419895 - 42419853
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttca 127  Q
    |||||||||||||||||  ||||||| ||||||||||||||||    
T  42419895 actgtttgggagaacttacgaaaacagcttatgacatttttca 42419853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 1625998 - 1625876
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatat 188  Q
    |||| |||||||| |||||  | ||||||||| | ||||  || | |||||| || |||||| || |||||||||||||||  ||||||||||| | |||    
T  1625998 tttgagagaacttatgaaagtagcttatgacaatgttcataagatgttttcagctgattttcgtaagttctccaagatagc--ttatgaaaacaacttat 1625901  T
Q  189 agcatacacaaaaacaatttaactt 213  Q
    | | || || |||||||||||||||    
T  1625900 aacttatacgaaaacaatttaactt 1625876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 12140630 - 12140593
Alignment:
Q  88 gtttgggagaacttttgaaaacaacttatgacattttt 125  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  12140630 gtttgagagaacttatgaaaacaacttatgacattttt 12140593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 39622058 - 39622017
Alignment:
Q  79 tgcgatactgtttgggagaacttttgaaaacaacttatgaca 120  Q
    ||||| |||||||| |||||||| ||||||||||||||||||    
T  39622058 tgcgacactgtttgagagaacttatgaaaacaacttatgaca 39622017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 40682365 - 40682438
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctc 160  Q
    ||||||||||||||| | |||| | ||||||||||| ||||  || | |||||| |||||||||||| ||||||    
T  40682365 tgtttgggagaacttgttaaaatagcttatgacattgttcataagttgttttcaacttattttcataagttctc 40682438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 42907404 - 42907335
Alignment:
Q  144 tattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaactt 213  Q
    |||||||||| | |||||||| |||||| | |||||||| | |||||| || || |||||||||||||||    
T  42907404 tattttcataagctctccaagttagcatatgtgaaaacaacttatagcttaaacgaaaacaatttaactt 42907335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 217
Target Start/End: Complemental strand, 43570507 - 43570386
Alignment:
Q  93 ggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagca 192  Q
    ||||||||| |||||||| ||||||||||| ||||  ||||||||| | |||||||||||| | | |||| ||| ||  ||||||| | | | ||||||     
T  43570507 ggagaacttatgaaaacagcttatgacattgttcataagctttttt-agcttattttcataagctttccaggatggc--ttatgaagataacgtatagct 43570411  T
Q  193 tacacaaaaacaatttaacttcatt 217  Q
    || |  |||||||||||||||||||    
T  43570410 taaatgaaaacaatttaacttcatt 43570386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 10494685 - 10494629
Alignment:
Q  172 ttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
    ||||||||||| | |||| |||| ||||||||||||| |||| ||| ||||||||||    
T  10494685 ttatgaaaacaacttataccataaacaaaaacaatttcactttattttatcatttgc 10494629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 25800937 - 25800870
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcata 153  Q
    ||||||||||||||||| | ||||||| || ||||||| ||||  |||| |||||| ||||||||||||    
T  25800937 actgtttgggagaacttattaaaacaa-ttctgacattgttcataagctattttcaacttattttcata 25800870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 40279351 - 40279274
Alignment:
Q  103 tgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaaca 182  Q
    ||||||||||||||| |||| ||||  | || |||||| || ||||||||| ||||||||| |||||  |||||||||||    
T  40279351 tgaaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagc--ttatgaaaaca 40279274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 40279421 - 40279344
Alignment:
Q  103 tgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaaca 182  Q
    ||||||||||||||| |||| ||||  | || |||||| || ||||||||| ||||||||| |||||  |||||||||||    
T  40279421 tgaaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagc--ttatgaaaaca 40279344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 41293135 - 41293215
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||||||||| | |||||| ||||||||||||  ||  |||| |||||| ||||| |||||| || ||||| ||||||    
T  41293135 tttgggagaacttataaaaacagcttatgacatttcgcataagctgttttcagcttatattcataagtactccaggatagc 41293215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 42659179 - 42659215
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacat 121  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  42659179 actgtttgggagaagttttgaaaacagcttatgacat 42659215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 44606079 - 44606115
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacat 121  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  44606079 actgtttggaagaacttatgaaaacaacttatgacat 44606115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 39105562 - 39105436
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatat 188  Q
    |||||||||| || |||||||| ||||||||||| ||||  |||| |||| | |||||||||||| |||||||||||||||  ||||||||||||  |||    
T  39105562 tttgggagaatttatgaaaacagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagc--ttatgaaaacagattat 39105465  T
Q  189 agcatacacaaaaacaatttaacttcatt 217  Q
    ||| || || |||||||||||||||||||    
T  39105464 agcttatacgaaaacaatttaacttcatt 39105436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 40438925 - 40439047
Alignment:
Q  88 gtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcata 187  Q
    |||||||||||| |||||||||||||| ||||||||||||  ||| |||||||  ||||||||||||||||||||||||||   | ||||||||||| ||    
T  40438925 gtttgggagaacatttgaaaacaacttgtgacatttttcataagc-tttttcaatttattttcatatgttctccaagatag--gtcatgaaaacagctta 40439021  T
Q  188 tagcatacacaaaaacaatttaactt 213  Q
    || | |||| |||| |||||||||||    
T  40439022 taacctacagaaaatcaatttaactt 40439047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 82 - 228
Target Start/End: Complemental strand, 10640058 - 10639914
Alignment:
Q  82 gatactgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaac 181  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||  ||||||||  | |||||||||||| ||||||||| ||||  |||||| ||||    
T  10640058 gatattgtttgggagaacttatgaaaacagcttatgacatttttcataagctttttctagcttattttcataagttctccaaaatag--tttatgtaaac 10639961  T
Q  182 agcatatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
    | |  ||  |||| ||||||||||||||| || ||| |||| |||||    
T  10639960 aactcatcacatatacaaaaacaatttaatttaattttatcttttgc 10639914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 16937853 - 16937975
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcat 186  Q
    ||||||| ||||||| |||||||| |||||||||  |||||  ||||||||||| ||||||||| || ||||||||| |||||   ||| |||||| | |    
T  16937853 tgtttggaagaacttatgaaaacagcttatgacaaatttcataagcttttttcagcttattttcctaagttctccaatatagc--gtataaaaacaactt 16937950  T
Q  187 atagcatacacaaaaacaatttaac 211  Q
    |||||||| ||||||||||||||||    
T  16937951 atagcatatacaaaaacaatttaac 16937975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 85 - 210
Target Start/End: Original strand, 16457947 - 16458070
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||  |||| ||||||  ||||||||| | |||||||||  ||||  | || |||||| |    
T  16457947 actgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagtttattttcacaagttctccaatttagc--tcataaaaacaac 16458044  T
Q  185 atatagcatacacaaaaacaatttaa 210  Q
     ||||||||| |||||||||||||||    
T  16458045 ttatagcatatacaaaaacaatttaa 16458070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 12857681 - 12857757
Alignment:
Q  93 ggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||||| |||||||||||||||||| ||||||  | ||||||||| |||||||||||| ||||||||| |||||    
T  12857681 ggagaacttatgaaaacaacttatgacaattttcacaaccttttttcagcttattttcataagttctccaatatagc 12857757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 211
Target Start/End: Complemental strand, 29925940 - 29925819
Alignment:
Q  88 gtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcata 187  Q
    |||||||||||||| |||||||| ||||||||| | ||||   | |||||||| |||||||||||| ||||||||| |||||  ||||| ||||| | ||    
T  29925940 gtttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattttcataagttctccaatatagc--ttatgtaaacaactta 29925843  T
Q  188 tagcatacacaaaaacaatttaac 211  Q
    ||||| | ||| ||||||||||||    
T  29925842 tagcacatacagaaacaatttaac 29925819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 37954788 - 37954704
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    |||||| ||||||  || |||||||| ||||||| | |||||| |||||||||||| |||||||||||||||||||||| |||||    
T  37954788 actgttcgggagagtttatgaaaacagcttatgaaaattttcattagcttttttcaacttattttcatatgttctccaatatagc 37954704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 228
Target Start/End: Complemental strand, 35446148 - 35446016
Alignment:
Q  94 gagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcat 193  Q
    ||||||||| |||||||  ||||||||||||||   ||||||||||| |||||||||||| ||||||||  |  ||  |||||| || ||  |||||| |    
T  35446148 gagaactttcgaaaacagtttatgacatttttcgtaagcttttttcagcttattttcataagttctccacaaatgc--ttatgagaagaggttatagcgt 35446051  T
Q  194 acacaaaaacaatttaacttcattatatcatttgc 228  Q
    | |||||||||||||||||| ||| ||||||||||    
T  35446050 atacaaaaacaatttaactttattttatcatttgc 35446016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 3735123 - 3735201
Alignment:
Q  82 gatactgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctc 160  Q
    |||||||||||| ||||||  |||||||| ||||||||| ||||||| ||||||||||| ||||| |||||| ||||||    
T  3735123 gatactgtttggtagaactgatgaaaacagcttatgacaattttcaaaagcttttttcagcttatcttcataagttctc 3735201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 12857314 - 12857445
Alignment:
Q  93 ggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagca 192  Q
    ||||||||| |||||||||||||||||| ||||||  ||||||||||| ||||||||  || ||||||||| |||||  |||| ||| ||||  ||||||    
T  12857314 ggagaacttatgaaaacaacttatgacaattttcacaagcttttttcagcttatttttgtaagttctccaatatagc--ttataaaatcagctaatagca 12857411  T
Q  193 tacacaaaaacaatttaacttcattatatcattt 226  Q
    |  ||||||| ||   ||||||||| ||||||||    
T  12857412 tgtacaaaaataacacaacttcattttatcattt 12857445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 12425623 - 12425538
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatc 222  Q
    |||||| |||||||||||| |||||||||||||||  || |||||||||| |||||| || || ||||||||||||||| ||| ||||    
T  12425623 ttttcaacttattttcataagttctccaagatagc--ttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatc 12425538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 40426867 - 40426726
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||||||| |  ||| |||||||| |||||| |||||||||  ||||||||| | ||||||||| || ||||||||||| |||  ||| | |||||||    
T  40426867 actgtttgggggtgcttatgaaaacagcttatgccatttttcataagcttttttaagcttattttcgtaagttctccaagacagc--ttacggaaacagc 40426770  T
Q  185 atatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
     || |||| | |||||||||||||| ||| ||| |||| |||||    
T  40426769 ttacagcaaatacaaaaacaatttagctttattttatcttttgc 40426726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 41957469 - 41957549
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcatt 217  Q
    ||||||||||||||||||| |||||| | ||||||  ||||||||||||| |||| | ||||  |||||||||||||||||||    
T  41957469 ttttcatcttattttcataagttctcaaggatagc--ttatgaaaacagcttataacttacatgaaaacaatttaacttcatt 41957549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 28777093 - 28776978
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcat 186  Q
    |||||| |||||||| | |||| |  |||||||||| ||||| | || |||| |||||||||||||  |||||||||||||||  ||||||||||||| |    
T  28777093 tgtttgtgagaacttataaaaatagtttatgacattgttcaaaaactatttttatcttattttcattagttctccaagatagc--ttatgaaaacagctt 28776996  T
Q  187 atagcatacacaaaaaca 204  Q
    ||||| || || ||||||    
T  28776995 atagcctatacgaaaaca 28776978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 206
Target Start/End: Complemental strand, 25461196 - 25461074
Alignment:
Q  82 gatactgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaac 181  Q
    |||||||||||| |||||||||| || || |||||| || ||||||  | | ||||||| |||||||||||  ||||||||| | |||  ||||||||||    
T  25461196 gatactgtttggtagaacttttggaatcagcttatggcaattttcataaacgtttttcagcttattttcatcagttctccaatagagc--ttatgaaaac 25461099  T
Q  182 agcatatagcatacacaaaaacaat 206  Q
    | | |||| |||| |||||||||||    
T  25461098 aacttataacatatacaaaaacaat 25461074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 7705970 - 7706050
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||||||||| |||||||| ||||||||| ||||||   |||||||||  |||||||||| | ||||||||| |||||    
T  7705970 tttgggagaacttatgaaaacagcttatgacagttttcacctgcttttttcggcttattttcacaagttctccaatatagc 7706050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 11700254 - 11700179
Alignment:
Q  95 agaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcat 171  Q
    ||||||| || ||||||||||||||||| |||| ||  || |||||||||||||||||| |||||||| ||||||||    
T  11700254 agaacttatggaaacaacttatgacattgttca-taaattgtttcatcttattttcataagttctccacgatagcat 11700179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 228
Target Start/End: Original strand, 9202737 - 9202857
Alignment:
Q  106 aaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaa 205  Q
    ||||| ||||||||||| ||||  |||| ||| || |||||||||||| ||||| |||||||  | ||||||||||||| ||| || || |  |||||||    
T  9202737 aaacagcttatgacattgttcataagctgtttccagcttattttcataagttcttcaagata--acttatgaaaacagcttattgcttatatgaaaacaa 9202834  T
Q  206 tttaacttcattatatcatttgc 228  Q
    |||||||| ||| |||| |||||    
T  9202835 tttaactttattttatcttttgc 9202857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 32372678 - 32372590
Alignment:
Q  134 tttttcatcttattttc-atatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatca 223  Q
    ||||||| ||||||||  ||||||||||||||||| |  || |||||||||| ||||||||| |||||||||||| ||||| ||| |||||    
T  32372678 tttttcagcttattttttatatgttctccaagataac--ttgtgaaaacagcttatagcatatacaaaaacaattcaactttattttatca 32372590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 19460355 - 19460428
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttct 159  Q
    ||||||| |||||||||||| ||||||||||||| ||||||||  ||| | ||||| |||||||||||| |||||    
T  19460355 actgtttaggagaacttttggaaacaacttatgatatttttcataagc-tgtttcagcttattttcataagttct 19460428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 222
Target Start/End: Original strand, 1464981 - 1465122
Alignment:
Q  78 ctgcgatactgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatga 177  Q
    |||||| |||||| |||||||||| |||||||| |||||| ||||  |||  || | |||||| |||||||||| | || ||||||||||||  |||| |    
T  1464981 ctgcgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattttcacaagtcctccaagatagc--ttat-a 1465077  T
Q  178 aaacagcatatagcatacacaaaaacaatttaacttcattatatc 222  Q
    ||| | | |||||| ||||||||| | ||||||||| ||| ||||    
T  1465078 aaataacttatagcttacacaaaagcgatttaactttattttatc 1465122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 32859688 - 32859808
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||| |||| || ||||||||||||| |||||||||||  ||| ||||||| ||||||||||||  ||||||  | | ||  |||| ||||||||    
T  32859688 actgtttggaagaatttatgaaaacaacttacgacatttttcataagc-tttttcagcttattttcataacttctccttgct-gc--ttattaaaacagc 32859783  T
Q  185 atatagcatacacaaaaacaattta 209  Q
     |||||||||  |||||||||||||    
T  32859784 ttatagcatattcaaaaacaattta 32859808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 32861860 - 32861980
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||| |||| || ||||||||||||| |||||||||||  ||| ||||||| ||||||||||||  ||||||  | | ||  |||| ||||||||    
T  32861860 actgtttggaagaatttatgaaaacaacttacgacatttttcataagc-tttttcagcttattttcataacttctccttgct-gc--ttattaaaacagc 32861955  T
Q  185 atatagcatacacaaaaacaattta 209  Q
     |||||||||  |||||||||||||    
T  32861956 ttatagcatattcaaaaacaattta 32861980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 42100413 - 42100329
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||| || |||||||| |||||| | ||||||||||  ||||| || | ||||||||||||||||||| |||||| || |||||    
T  42100413 actgtgtgagagaacttgtgaaaatagcttatgacatagttcaaaaggtgttttcatcttattttcataagttctcaaaaatagc 42100329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 42500218 - 42500293
Alignment:
Q  93 ggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||||| || |||||||||| |||| ||||||  |||||||| || |||||||||||| ||||||||| |||||    
T  42500218 ggagaacttatggaaacaacttacgacaattttcataagcttttt-caacttattttcataagttctccaatatagc 42500293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 4014437 - 4014489
Alignment:
Q  130 agcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||| |||||| |||||||||||| |||||||||||||||  |||||||||||||    
T  4014437 agctgttttcagcttattttcataagttctccaagatagc--ttatgaaaacagc 4014489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 191
Target Start/End: Complemental strand, 7985067 - 7984967
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatat 188  Q
    ||||||||| |||  ||||||| ||| |||| || ||||  |||| |||||| ||||||||||||  ||||||||||||||  ||||||||| ||| |||    
T  7985067 tttgggagagcttaagaaaacagcttgtgacgttgttcataagctgttttcagcttattttcataaattctccaagatagc--ttatgaaaaaagcttat 7984970  T
Q  189 agc 191  Q
    |||    
T  7984969 agc 7984967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 3520679 - 3520637
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttca 127  Q
    ||||||||||||||||| |||||||| |||||||| |||||||    
T  3520679 actgtttgggagaacttatgaaaacatcttatgacttttttca 3520637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 15246933 - 15246838
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||||||||| ||||| |||||||||||||  ||||  || ||||| || |||||||| ||   ||||| ||||||||  |||||||||||||    
T  15246933 tgtttgggagaacttatgaaagcaacttatgacatcattcataagttttttgcaacttatttttatcatttctctaagatagc--ttatgaaaacagc 15246838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 122
Target Start/End: Complemental strand, 41535480 - 41535446
Alignment:
Q  88 gtttgggagaacttttgaaaacaacttatgacatt 122  Q
    |||||||||||||| ||||||||||||||||||||    
T  41535480 gtttgggagaacttatgaaaacaacttatgacatt 41535446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 32862644 - 32862764
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||| |||| || ||||||||||||| |||||||||||  ||| |||| || ||||||||||||  ||||||  | | ||  |||| ||||||||    
T  32862644 actgtttggaagaatttatgaaaacaacttacgacatttttcataagc-ttttccagcttattttcataacttctccttgct-gc--ttattaaaacagc 32862739  T
Q  185 atatagcatacacaaaaacaattta 209  Q
     |||||||||  |||||||||||||    
T  32862740 ttatagcatattcaaaaacaattta 32862764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 32942659 - 32942613
Alignment:
Q  146 ttttcatatgttctccaagatagcatttatgaaaacagcatatagcata 194  Q
    |||||||| |||||||||||||||  ||||||||||||| |||||||||    
T  32942659 ttttcataagttctccaagatagc--ttatgaaaacagcttatagcata 32942613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 4619808 - 4619725
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||||||||| ||| ||||||||||| |||||| | ||||  ||||  ||||| ||||||| |||| |||||||| ||||||    
T  4619808 actgtttgggagagcttatgaaaacaactaatgaca-tgttcataagctggtttcaccttatttccataagttctccatgatagc 4619725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 9107190 - 9107114
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    ||||||||||||||  |||||||| |||| |||| ||||||  | ||||||||  || ||||||||| |||||||||    
T  9107190 tgtttgggagaactcatgaaaacagcttaggacaattttcacaaacttttttctgctaattttcataagttctccaa 9107114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 12459970 - 12460006
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacat 121  Q
    ||||||||||||||| | |||||||||||||||||||    
T  12459970 actgtttgggagaacctatgaaaacaacttatgacat 12460006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 23160766 - 23160734
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacat 121  Q
    ||||||||| |||||||||||||||||||||||    
T  23160766 tttgggagatcttttgaaaacaacttatgacat 23160734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 42646933 - 42646877
Alignment:
Q  171 tttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatcatttg 227  Q
    |||||||||||| | |||||| || |||||||||||||||||| ||| |||| ||||    
T  42646933 tttatgaaaacaccttatagcttaaacaaaaacaatttaacttaattttatcctttg 42646877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 43300980 - 43300896
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    |||||| ||||||| || | |||||| | |||||||||||  |  ||| | ||||| |||||||||||| |||||||||||||||    
T  43300980 actgttggggagaagttataaaaacagcctatgacattttatataagcatgtttcagcttattttcataagttctccaagatagc 43300896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 9e-24; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 420462 - 420321
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||||||||||| ||||||||| |||||||| ||||| | ||| ||||||| |||||||||||| ||||||||| |||||  ||| | ||||| |    
T  420462 actgtttgggagaacttatgaaaacaatttatgacagttttctaaagcctttttcaacttattttcataagttctccaatatagc--ttacggaaacaac 420365  T
Q  185 atatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
     ||||||||| |||||||||||| ||| | ||| |||| |||||    
T  420364 ttatagcatatacaaaaacaattgaacattattttatcttttgc 420321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 235
Target Start/End: Original strand, 38499875 - 38500034
Alignment:
Q  79 tgcgatactgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaa 178  Q
    ||||| ||| ||||||||||||||| |||||| ||||||||||||||||  |||||||| || |||||||||||| |||||||||||| ||  |||||||    
T  38499875 tgcgagactctttgggagaacttttcaaaacagcttatgacatttttcataagctttttccagcttattttcataagttctccaagattgc--ttatgaa 38499972  T
Q  179 aacagc------atatagcatacacaaaaacaatttaacttcattatatcatttgcaacaaaa 235  Q
     |||||      || ||||||| || |||| ||| |||||| |||||||||||| ||||||||    
T  38499973 gacagcttaacaatttagcatatac-aaaagaatataactttattatatcatttccaacaaaa 38500034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 228
Target Start/End: Complemental strand, 48470144 - 48470005
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcat 186  Q
    ||||||||||||||| |||||||| |||||| |||||||||  ||||||||| | ||||| |||||| ||| | ||| |||||  ||||||||||| | |    
T  48470144 tgtttgggagaacttatgaaaacagcttatggcatttttcataagcttttttgagcttatgttcataagttattcaaaatagc--ttatgaaaacaactt 48470047  T
Q  187 atagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
    |||  ||| |||||||||||||||||| ||| |||| |||||    
T  48470046 atattatatacaaaaacaatttaacttaattttatcttttgc 48470005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 33678878 - 33678756
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatat 188  Q
    ||||||||||||| |||||||||||||| ||||| ||||  || | |||||| |||||||||| | ||| |||||||||||  ||||||||||||| |||    
T  33678878 tttgggagaacttatgaaaacaacttataacattgttcatgagatgttttcaacttattttcacaagttttccaagatagc--ttatgaaaacagcttat 33678781  T
Q  189 agcatacacaaaaacaatttaactt 213  Q
    ||| |  |||||||| |||||||||    
T  33678780 agcttttacaaaaaccatttaactt 33678756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 207
Target Start/End: Complemental strand, 34744130 - 34744010
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||| ||||||  |||||| ||||||||||| ||||||  ||||||||||  |||||||| ||| ||||||||| |||||  ||||||||||| |    
T  34744130 actgtttggaagaactaatgaaaagaacttatgacaattttcacaagcttttttcgccttatttttataagttctccaatatagc--ttatgaaaacaac 34744033  T
Q  185 atatagcatacacaaaaacaatt 207  Q
     |||| |||| ||||||||||||    
T  34744032 ttataccatatacaaaaacaatt 34744010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 105 - 230
Target Start/End: Complemental strand, 39280044 - 39279921
Alignment:
Q  105 aaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaaca 204  Q
    |||||| |||||  |||||| ||  ||||||||||| |||||||||| | |||||||||||||  |||||||||| |||| |||| |||| ||| |||||    
T  39280044 aaaacagcttatagcattttacataagcttttttcagcttattttcaaaagttctccaagata--atttatgaaatcagcctataacatatacacaaaca 39279947  T
Q  205 atttaacttcattatatcatttgcaa 230  Q
    ||||||||| ||| |||| |||||||    
T  39279946 atttaacttaattttatcttttgcaa 39279921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 20526548 - 20526407
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||||| |||||||| ||||||||  |||| |||||||||   |||| |||| | |||||||||||  ||||||||| |||||  |||||||||||||    
T  20526548 actgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgtttttagcttattttcattagttctccaaaatagc--ttatgaaaacagc 20526451  T
Q  185 atatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
     ||||||||  ||||| | |||||||||| ||| |||| |||||    
T  20526450 ttatagcatgtacaaacataatttaactttattttatcttttgc 20526407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 30570909 - 30571025
Alignment:
Q  95 agaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcata 194  Q
    ||||||| |||||||| ||||||||| ||||||  |||||||||||| ||| ||||||| |||||||||  |||   |||| |||| ||| |||||||||    
T  30570909 agaacttgtgaaaacagcttatgacaattttcataagcttttttcatgttaatttcataagttctccaatgtag--gttataaaaatagcttatagcata 30571006  T
Q  195 cacaaaaacaatttaactt 213  Q
     ||||||| ||||||||||    
T  30571007 tacaaaaataatttaactt 30571025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 11619131 - 11619204
Alignment:
Q  90 ttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    ||||||||| || |||||||||||||||||| ||||||  ||||||||||| |||| ||||||| |||||||||    
T  11619131 ttgggagaatttatgaaaacaacttatgacaattttcataagcttttttcaacttaatttcataagttctccaa 11619204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 46280285 - 46280363
Alignment:
Q  130 agcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaa 210  Q
    ||||||||||| | |||||||||| ||||||||| |||||  |||| |||||||| ||||||||| |||||||||||||||    
T  46280285 agcttttttcagcctattttcataagttctccaatatagc--ttataaaaacagcttatagcatatacaaaaacaatttaa 46280363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 19022555 - 19022676
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcat 186  Q
    |||||||||||| || |||||||||||||||||| ||||||  || | | |||| |||||||||||| ||||||||| |||||  |||| |||||| | |    
T  19022555 tgtttgggagaatttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataagttctccaatatagc--ttataaaaacaactt 19022652  T
Q  187 atagcatacacaaaaacaatttaa 210  Q
    |||||||  |  ||||||||||||    
T  19022653 atagcatttattaaaacaatttaa 19022676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 213
Target Start/End: Original strand, 33601387 - 33601503
Alignment:
Q  94 gagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcat 193  Q
    |||||||| |||||||| ||||||||| ||||||  ||||||||||| ||||  |||||| |||||| ||||||||  |||| |||||| | |||||||     
T  33601387 gagaacttatgaaaacagcttatgacacttttcataagcttttttcagcttaaattcataagttctctaagatagc--ttat-aaaacaacttatagcaa 33601483  T
Q  194 acacaaaaacaatttaactt 213  Q
    | ||||||| ||||||||||    
T  33601484 atacaaaaataatttaactt 33601503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 45593630 - 45593514
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagctttttt-catcttattttcatatgttctccaagatagcatttatgaaaacag 183  Q
    ||||||||||||||||| | |||||| || |||||||||||||  ||||||||| ||  |||||||| || |||||||||||||||  |||  |||| ||    
T  45593630 actgtttgggagaacttataaaaacatctgatgacatttttcataagcttttttccagtttattttcgtaagttctccaagatagc--ttagaaaaatag 45593533  T
Q  184 catatagcatacacaaaaa 202  Q
    | ||||||||| |||||||    
T  45593532 cttatagcatatacaaaaa 45593514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 89 - 190
Target Start/End: Complemental strand, 5947282 - 5947183
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatat 188  Q
    ||||| ||||||||||||| || |||||| |||||||||  |||| |||||| ||||||||||||  |||||| |||||||  ||||||| ||||| |||    
T  5947282 tttggtagaacttttgaaaccagcttatggcatttttcataagctcttttcagcttattttcataacttctcctagatagc--ttatgaatacagcttat 5947185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 40252132 - 40252223
Alignment:
Q  142 cttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatcatttgcaacaaaa 235  Q
    |||||||||||| ||||||||||||| |  ||||||||| ||| |||| |||| |||||||| |||||||||  || |||||||||||| ||||    
T  40252132 cttattttcataagttctccaagataac--ttatgaaaagagcttataacatatacaaaaacgatttaactttgttttatcatttgcaataaaa 40252223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 3308219 - 3308295
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttt-tcaatagcttttttcatcttattttcatatgttctc 160  Q
    |||||||||||||||||||||||| | |||||| |||||| |||  ||||||||||| |||||||| ||| ||||||    
T  3308219 actgtttgggagaacttttgaaaatagcttatgccattttctcataagcttttttcagcttattttaataagttctc 3308295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 21568463 - 21568547
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||||||||||||| |||||||| ||||| ||| ||||||  |||| |||||| |||| || |||| ||||||||| |||||    
T  21568463 actgtttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataagttctccaatatagc 21568547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 39907866 - 39907781
Alignment:
Q  124 ttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaac 211  Q
    |||| ||||| |||||| |||||||||||  |||||| |||||||  |||||||||||||  |||||| || ||||||||||||||||    
T  39907866 ttcattagctgttttcagcttattttcattagttctctaagatag--tttatgaaaacagtttatagcttatacaaaaacaatttaac 39907781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 3927982 - 3928052
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttct 159  Q
    |||| ||||| |||| ||||||| |||||||| ||||||  ||||||||||| |||||||||||| |||||    
T  3927982 tttgagagaattttttaaaacaatttatgacaattttcataagcttttttcaacttattttcataagttct 3928052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 19302535 - 19302605
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttct 159  Q
    |||||||||| || |||||||| ||||||||| ||||||  | ||||||||| |||||||||||| |||||    
T  19302535 tttgggagaatttatgaaaacagcttatgacaattttcataaacttttttcaacttattttcataagttct 19302605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 43648292 - 43648225
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaaca 204  Q
    |||||| ||||||||||||| ||||||||||||||  ||||||||||||| |||| |||| || ||||||    
T  43648292 ttttcaacttattttcatattttctccaagatagc--ttatgaaaacagcttatatcatatacgaaaaca 43648225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 44989645 - 44989748
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagct-tttttcatcttattttcatatgttctccaagatagcatttatgaaaacag 183  Q
    ||||||||||| ||||| |||||||||||| ||||||| ||||  |||| |||| || ||||||||||||  |||| ||||||| |  ||||||||||||    
T  44989645 actgtttgggaaaacttatgaaaacaacttctgacattgttcacaagctgttttgcagcttattttcataatttctacaagatatc--ttatgaaaacag 44989742  T
Q  184 catata 189  Q
    | ||||    
T  44989743 cctata 44989748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 45790397 - 45790519
Alignment:
Q  88 gtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcata 187  Q
    |||| ||||||||| |||||| ||||||||||| |||| || ||| ||||||| |||||||||||| ||| ||||| ||||  ||||| |||||| | ||    
T  45790397 gtttcggagaacttatgaaaataacttatgacaatttttaaaagc-tttttcagcttattttcataagttatccaatatag--tttataaaaacaactta 45790493  T
Q  188 tagcatacacaaaaacaatttaactt 213  Q
    |||| || | | |||||| |||||||    
T  45790494 tagcttataaataaacaaattaactt 45790519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 48507797 - 48507694
Alignment:
Q  113 ttatgacatttttcaatagcttttttcatcttattttcatatgttctccaag-atagcatttatgaaaacagcatatagcatacacaaaaacaatttaac 211  Q
    ||||||||||||| |  ||  ||||||| |||| ||||||| |||||| ||| || ||  ||||||||||||  ||||||||| ||||||||||||||||    
T  48507797 ttatgacattttttataagtatttttcagcttaatttcataagttctctaaggatggc--ttatgaaaacagtttatagcatatacaaaaacaatttaac 48507700  T
Q  212 ttcatt 217  Q
    ||||||    
T  48507699 ttcatt 48507694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 17944331 - 17944437
Alignment:
Q  105 aaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaaca 204  Q
    |||||| ||||||||| ||||||   |||||||||| |||| |||||||  || ||||||||| |  ||||||||||| | || | |||| |||||||||    
T  17944331 aaaacagcttatgacacttttcatatgcttttttcagcttaatttcataaattatccaagataac--ttatgaaaacaacttacaacatatacaaaaaca 17944428  T
Q  205 atttaactt 213  Q
    |||||||||    
T  17944429 atttaactt 17944437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 28614530 - 28614457
Alignment:
Q  90 ttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    |||||||||||| |||||||||| ||| ||| ||||||  |||||||||||  ||| ||||||| |||||||||    
T  28614530 ttgggagaacttatgaaaacaacatataacaattttcacaagcttttttcagtttaatttcataagttctccaa 28614457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 12110404 - 12110327
Alignment:
Q  143 ttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatc 222  Q
    ||||||||||| ||||| |||||||||  ||||||||||||| |||||| || || |||||||||| |||| ||| ||||    
T  12110404 ttattttcataagttcttcaagatagc--ttatgaaaacagcttatagcttataccaaaacaatttgactttattttatc 12110327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 4970760 - 4970803
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaa 128  Q
    ||||||||||||||||| ||||||||||||||| || |||||||    
T  4970760 actgtttgggagaacttatgaaaacaacttatggcaattttcaa 4970803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 5947343 - 5947280
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattt 148  Q
    ||||||||| ||||||||||||| || ||||||||||||||||   ||||||| || |||||||    
T  5947343 actgtttggaagaacttttgaaaccagcttatgacatttttcatatgctttttacagcttattt 5947280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 228
Target Start/End: Complemental strand, 39968013 - 39967881
Alignment:
Q  94 gagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcat 193  Q
    |||||||| |||||||| |||||| |||| ||||  |||| |||||| |||||||||||  ||||||  |||||||  ||||||||||| | ||||||      
T  39968013 gagaacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagc--ttatgaaaacaacttatagcta 39967916  T
Q  194 acacaaaaacaatttaacttcattatatcatttgc 228  Q
      || |||||||||||| || ||| |||| |||||    
T  39967915 gtacgaaaacaatttaagtttattttatcttttgc 39967881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 44822011 - 44821935
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaactt 213  Q
    |||||| |||||||||||| ||||||||  |||||  ||||||||||||| |||| | || ||||||||||||| ||||    
T  44822011 ttttcaacttattttcataagttctccagaatagc--ttatgaaaacagcttataacttatacaaaaacaatttgactt 44821935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 19214376 - 19214458
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||||||||||| |||||||| |  |||||| ||||||  | ||| ||||| |||||||||||| ||||| ||| |||||    
T  19214376 tgtttgggagaacttatgaaaacagcaaatgacaattttcataaacttgtttcaacttattttcataagttctacaatatagc 19214458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 210
Target Start/End: Original strand, 33602007 - 33602117
Alignment:
Q  97 aacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcataca 196  Q
    ||||| |||||||| ||||||||| ||||||  ||| ||||||| ||||  |||||| |||||| ||||||||  |||| ||| || | ||||||| | |    
T  33602007 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagc--ttataaaacca-cttatagcaaata 33602103  T
Q  197 caaaaacaatttaa 210  Q
    ||||||||||||||    
T  33602104 caaaaacaatttaa 33602117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 22283757 - 22283847
Alignment:
Q  130 agcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatc 222  Q
    |||| |||||| ||||||| |||| |||||| ||||| |  |||||||||||||  ||||||  | |||||||||||||||||| ||| ||||    
T  22283757 agctgttttcagcttatttccataagttctctaagatgg--tttatgaaaacagtttatagctgatacaaaaacaatttaactttattttatc 22283847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 34036014 - 34035924
Alignment:
Q  90 ttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaaca 182  Q
    |||| ||||||| |||||| ||||||||||||| ||||  || | |||||| |||||||||  | |||||| ||||||||  |||||||||||    
T  34036014 ttggaagaacttatgaaaataacttatgacattgttcataagttgttttcaacttattttcgcaagttctctaagatagc--ttatgaaaaca 34035924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 36517679 - 36517597
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||||||||||||| | |||||| |||  |||||| ||||  |||| ||||||  |||||||||||  ||||||||||||||    
T  36517679 actgtttgggagaacttattaaaacagctt--gacattgttcataagctattttcagtttattttcataatttctccaagatagc 36517597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 39281021 - 39280976
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaa 180  Q
    |||||| ||||||| |||||||||||||||||||| | ||||||||    
T  39281021 ttttcagcttatttccatatgttctccaagatagcttatatgaaaa 39280976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 43694595 - 43694661
Alignment:
Q  142 cttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaa 210  Q
    |||||||||||| ||||| | | |||||  |||| |||||||| ||||||||| |||||||||||||||    
T  43694595 cttattttcataagttcttcgatatagc--ttataaaaacagcttatagcatatacaaaaacaatttaa 43694661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 753011 - 752939
Alignment:
Q  145 attttcatatgttctccaagatagcatttatgaaaacagcatatagc--atacacaaaaacaatttaacttcatt 217  Q
    ||||||||||| || |||||||||  ||||| |||||||| ||||||  ||||| ||||||||| ||||||||||    
T  753011 attttcatatgctccccaagatag--tttatcaaaacagcttatagcttatacaaaaaaacaatataacttcatt 752939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 30181296 - 30181232
Alignment:
Q  103 tgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagata 167  Q
    |||||||||| ||||||||| ||||  |||| || ||| |||||||||| | |||||||||||||    
T  30181296 tgaaaacaacatatgacattattcataagctattatcagcttattttcaaaagttctccaagata 30181232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 34083578 - 34083634
Alignment:
Q  172 ttatgaaaacagcatatagcatacacaaaaacaatttaacttcattatatcatttgc 228  Q
    ||||||||||||| |||||| || ||| |||||||||||||| ||| |||| |||||    
T  34083578 ttatgaaaacagcttatagcttatacacaaacaatttaactttattttatcttttgc 34083634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 39279840 - 39279739
Alignment:
Q  110 aacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaattta 209  Q
    ||||||||| ||||||||  || ||||| || || ||||| ||| ||| ||||||||| |  |||||||| |||| ||||| ||| |||||| |||||||    
T  39279840 aacttatgatatttttcacaagttttttacagctaatttttataagttttccaagataac--ttatgaaaccagcttatagaatatacaaaagcaattta 39279743  T
Q  210 actt 213  Q
    ||||    
T  39279742 actt 39279739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 39629928 - 39630009
Alignment:
Q  86 ctgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    |||||| |||||||||  ||||||| ||||||||| ||||||  ||||||||||| |||||  ||||| ||||| ||| |||||    
T  39629928 ctgtttaggagaactt--gaaaacagcttatgacaattttcataagcttttttcaacttatagtcataagttcttcaatatagc 39630009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 47177681 - 47177612
Alignment:
Q  142 cttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaactt 213  Q
    ||||||||||||  ||||||||||||||  || |||||||||| |||||| || |  |||||||||||||||    
T  47177681 cttattttcataaattctccaagatagc--ttttgaaaacagcttatagcttatatgaaaacaatttaactt 47177612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 34430447 - 34430550
Alignment:
Q  103 tgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaa 202  Q
    |||||||| |||||||||||| |||  ||||||||||| ||||||||||||  ||||||||||||||  ||||||||||| | |||| |||| |||||||    
T  34430447 tgaaaacagcttatgacatttatcataagcttttttcagcttattttcataacttctccaagatagc--ttatgaaaacaccttataacatatacaaaaa 34430544  T
Q  203 caattt 208  Q
    ||||||    
T  34430545 caattt 34430550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 20368153 - 20368287
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatat 188  Q
    ||||||||||||| |||||||||||||||||| | ||||  ||||  ||||| |||||||||||| ||||||||||| |||  ||||||||||| | |||    
T  20368153 tttgggagaacttatgaaaacaacttatgaca-tgttcataagctagtttcaacttattttcataagttctccaagaaagc--ttatgaaaacaacttat 20368249  T
Q  189 agcatacacaaaaacaatttaacttcattatatcattt 226  Q
    | |  | |||||||||||| ||||||||| || |||||    
T  20368250 aactcatacaaaaacaattcaacttcattttagcattt 20368287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 227
Target Start/End: Complemental strand, 2735171 - 2735031
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    |||||||| || ||||| |||||||  ||||||||||||||||  |||| |||||  |||||||||||| ||| | |||||| ||  |||||||||||||    
T  2735171 actgtttgagataacttatgaaaacggcttatgacatttttcataagctgttttcggcttattttcataagttgttcaagattgc--ttatgaaaacagc 2735074  T
Q  185 atatagcatacacaaaaacaatttaacttcattatatcatttg 227  Q
     |||||  || ||||||| |||||||||| ||| |||| ||||    
T  2735073 ttatagattatacaaaaataatttaactttattttatcttttg 2735031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 31813259 - 31813179
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagc 169  Q
    ||||||||||||| ||||||   ||||||| ||| ||||  |||  |||||| ||||||||||||||||||||||||||||    
T  31813259 tttgggagaacttatgaaaattgcttatgagattgttcataagccgttttcagcttattttcatatgttctccaagatagc 31813179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 227
Target Start/End: Original strand, 9093528 - 9093664
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatat 188  Q
    |||| |||| ||| |||||| | ||||||||||| || |  | || |||||| ||||||||| || |||||| |||| |||  ||||||||||||| |||    
T  9093528 tttgtgagagcttatgaaaatagcttatgacattgttaataacctgttttcagcttattttcttaagttctctaagacagc--ttatgaaaacagcttat 9093625  T
Q  189 agcatacacaaaaacaatttaacttcattatatcatttg 227  Q
    ||| || || ||||||||||||||| ||| |||| ||||    
T  9093626 agcttatacgaaaacaatttaactttattttatcttttg 9093664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 9912159 - 9912242
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatag 168  Q
    ||||||| ||||||||| ||||| || ||||||||||| ||||  |||| |||| | |||||||||||| ||||||||| ||||    
T  9912159 actgtttcggagaacttatgaaaccagcttatgacattgttcataagctgttttgagcttattttcataagttctccaatatag 9912242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 837234 - 837309
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaact 212  Q
    |||||| |||||||||||| |||||||||||||||  | ||||||||  | |||||| ||||| ||||||||||||||    
T  837234 ttttcagcttattttcataagttctccaagatagc--taatgaaaactacttatagcttacaccaaaacaatttaact 837309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 24982807 - 24982700
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||| ||||||| ||||| |||| |||||||||||||| |  ||||||||| | ||||   ||||| ||||||||| |||  | |||||||||||||    
T  24982807 actgttttggagaacatttgagaacagcttatgacatttttaatgagctttttttagcttaccctcataagttctccaaaata--acttatgaaaacagc 24982710  T
Q  185 atatagcata 194  Q
     |||||||||    
T  24982709 ttatagcata 24982700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 191
Target Start/End: Complemental strand, 31624190 - 31624088
Alignment:
Q  87 tgtttggga-gaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagca 185  Q
    ||||||||| |||||| |||||||| |||||||||| || ||  |||| |||||| ||||||||||||  ||||||||||||||   ||||||||||||     
T  31624190 tgtttgggaagaacttatgaaaacagcttatgacatgtt-cataagctgttttcaacttattttcataatttctccaagatagc--ctatgaaaacagct 31624094  T
Q  186 tatagc 191  Q
    ||||||    
T  31624093 tatagc 31624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 835267 - 835324
Alignment:
Q  135 ttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcata 194  Q
    |||||| |||||||||||| |||||||||||||||  |||||||||| || |||||||||    
T  835267 ttttcagcttattttcataagttctccaagatagc--ttatgaaaactgcttatagcata 835324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 848091 - 848023
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcata 153  Q
    ||||||||| ||||||| | |||||  |||||||||||||||   ||||||||||| ||||||||||||    
T  848091 actgtttggaagaacttataaaaactgcttatgacatttttcttaagcttttttcagcttattttcata 848023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 6016343 - 6016483
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagc 184  Q
    ||||||||  ||||| | |||||||||||||| |   ||||||  || |||||||| |||||||| ||||||||||||| ||||  ||||| |||||| |    
T  6016343 actgtttgacagaacgtatgaaaacaacttattatggttttcataagtttttttcaacttatttttatatgttctccaatatag--tttataaaaacaac 6016440  T
Q  185 atatagcatacacaaaaacaatttaacttcattatatcatttg 227  Q
    || ||| |||   |||||||||| ||||| ||| |||| ||||    
T  6016441 atgtagaatattaaaaaacaattgaactttattttatcttttg 6016483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 11784069 - 11784121
Alignment:
Q  156 ttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaa 210  Q
    |||||||| |||||  ||||||||||||| ||||||||| |||||||||||||||    
T  11784069 ttctccaatatagc--ttatgaaaacagcttatagcatatacaaaaacaatttaa 11784121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 19411519 - 19411582
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttc 150  Q
    |||||||||||||||||| ||||| ||||||||| || |||  ||||||||||  |||||||||    
T  19411519 tgtttgggagaacttttgtaaacagcttatgacagttctcataagcttttttcggcttattttc 19411582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 6536672 - 6536597
Alignment:
Q  130 agcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatt 207  Q
    ||||||||||| ||||||||||||  |||||||| |||||  || | |||||| | ||||||||| ||||||||||||    
T  6536672 agcttttttcaacttattttcataaattctccaatatagc--ttctaaaaacaacttatagcatatacaaaaacaatt 6536597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 35099137 - 35099019
Alignment:
Q  86 ctgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagca 185  Q
    ||||||||||||| ||  ||||||| || ||||||||||||  ||  |||||||| |||||||||| |  | ||| ||||||||  ||||||||||| |     
T  35099137 ctgtttgggagaatttaggaaaacagctaatgacatttttc-gtaagttttttcaacttattttcaaaaatactctaagatagc--ttatgaaaacaact 35099041  T
Q  186 tatagcatacacaaaaacaatt 207  Q
    |||| |||| ||||||||||||    
T  35099040 tataacatatacaaaaacaatt 35099019  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 2455357 - 2455259
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatat 188  Q
    |||| |||||||| |||||||||||||| ||||| || |  || | |||||| |||||||||| |  ||||||||||| |||  |||||||||||| |||    
T  2455357 tttgagagaacttatgaaaacaacttattacattgtttataagttgttttcagcttattttcacaacttctccaagattgca--tatgaaaacagcttat 2455260  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 6909925 - 6909966
Alignment:
Q  172 ttatgaaaacagcatatagcatacacaaaaacaatttaactt 213  Q
    ||||||||||| | ||||||||| ||||||||||||||||||    
T  6909925 ttatgaaaacaacttatagcatatacaaaaacaatttaactt 6909966  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 9559511 - 9559544
Alignment:
Q  89 tttgggagaacttttgaaaacaacttatgacatt 122  Q
    ||||||||||||| ||||||||||||||||||||    
T  9559511 tttgggagaacttatgaaaacaacttatgacatt 9559544  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 2455090 - 2455015
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaa 163  Q
    ||||||||||||||||| |||||||   |||||||||| ||||  | || |||||| |||||||||||  |||||||||    
T  2455090 actgtttgggagaacttctgaaaac---ttatgacattgttcataacctgttttcagcttattttcattagttctccaa 2455015  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 8201277 - 8201212
Alignment:
Q  143 ttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaa 210  Q
    ||||||||||| ||||||||| ||| |  |||| |||||| | ||||| |||||||||||||||||||    
T  8201277 ttattttcataagttctccaacataac--ttataaaaacaacttataggatacacaaaaacaatttaa 8201212  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 9763644 - 9763567
Alignment:
Q  103 tgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaaca 182  Q
    |||||||| ||||||||| |||| |  ||||||||||| |||| ||||||| ||||| ||| |||||  |||||||||||    
T  9763644 tgaaaacagcttatgacacttttgataagcttttttcaacttaatttcataagttctacaatatagc--ttatgaaaaca 9763567  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 24626324 - 24626271
Alignment:
Q  158 ctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaatttaactt 213  Q
    ||||||||||||  ||||||||||| | ||||| ||| ||||||||||||||||||    
T  24626324 ctccaagatagc--ttatgaaaacaacttatagaatatacaaaaacaatttaactt 24626271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 27857459 - 27857423
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacat 121  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  27857459 actgtttgggagagcttatgaaaacaacttatgacat 27857423  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 34430815 - 34430743
Alignment:
Q  87 tgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttct 159  Q
    ||||||||| || || |||||||||||||||||| ||||||   |||||||  | |||||||||||| |||||    
T  34430815 tgtttgggataatttatgaaaacaacttatgacaattttcatatgctttttcaaacttattttcataagttct 34430743  T

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Target: scaffold0221 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 228
Target Start/End: Complemental strand, 22312 - 22192
Alignment:
Q  106 aaacaacttatgacatttttcaatagcttttttcatcttattttcatatgttctccaagatagcatttatgaaaacagcatatagcatacacaaaaacaa 205  Q
    ||||| ||||||||| |||||   ||||||||||| |||||||||||| ||| ||||| |||||  |||||| |||||| ||||| ||| ||||| | ||    
T  22312 aaacagcttatgacaattttcgtaagcttttttcagcttattttcataagttttccaacatagc--ttatgataacagcttatagtatatacaaagataa 22215  T
Q  206 tttaacttcattatatcatttgc 228  Q
    ||||| || ||| || |||||||    
T  22214 tttaatttaattttaccatttgc 22192  T

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Target: scaffold0103 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 52054 - 52005
Alignment:
Q  110 aacttatgacatttttcaatagcttttttcatcttattttcatatgttct 159  Q
    ||||||||| | ||||||| ||||||||||| |||||||||||| |||||    
T  52054 aacttatgataattttcaaaagcttttttcaacttattttcataagttct 52005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 24723 - 24675
Alignment:
Q  85 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagct 133  Q
    ||||||||||||||||| | |||||| ||||||||||| ||||| ||||    
T  24723 actgtttgggagaacttatcaaaacagcttatgacattcttcaaaagct 24675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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