View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5659-Insertion-1 (Length: 545)

Name: NF5659-Insertion-1
Description: NF5659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5659-Insertion-1
NF5659-Insertion-1
[»] chr8 (36 HSPs)
chr8 (374-545)||(26378030-26378201)
chr8 (8-148)||(26377695-26377834)
chr8 (287-423)||(14130107-14130244)
chr8 (285-433)||(24730972-24731121)
chr8 (281-433)||(2189722-2189874)
chr8 (281-420)||(26374836-26374975)
chr8 (287-422)||(20693741-20693877)
chr8 (266-347)||(26377952-26378033)
chr8 (290-423)||(2687687-2687821)
chr8 (287-410)||(16598190-16598315)
chr8 (306-435)||(24731188-24731318)
chr8 (438-545)||(26380482-26380591)
chr8 (289-382)||(2609547-2609640)
chr8 (287-406)||(24578804-24578924)
chr8 (287-360)||(16598108-16598181)
chr8 (287-340)||(30440679-30440732)
chr8 (290-393)||(2689092-2689195)
chr8 (322-410)||(18468626-18468714)
chr8 (289-381)||(24577581-24577673)
chr8 (282-378)||(2188397-2188495)
chr8 (291-382)||(25479457-25479548)
chr8 (350-421)||(42890397-42890468)
chr8 (345-433)||(22926648-22926737)
chr8 (345-425)||(42891672-42891753)
chr8 (345-433)||(22921850-22921939)
chr8 (345-425)||(23570584-23570665)
chr8 (345-433)||(6845336-6845425)
chr8 (345-433)||(22512046-22512135)
chr8 (345-433)||(22519346-22519435)
chr8 (295-360)||(28263840-28263905)
chr8 (345-422)||(22520810-22520888)
chr8 (345-434)||(37189866-37189956)
chr8 (268-332)||(30442450-30442514)
chr8 (290-420)||(31072134-31072271)
chr8 (397-433)||(18180713-18180749)
chr8 (287-341)||(10629211-10629265)
[»] chr4 (27 HSPs)
chr4 (287-423)||(13991389-13991526)
chr4 (285-425)||(40206088-40206229)
chr4 (287-421)||(7634022-7634157)
chr4 (290-427)||(21433569-21433707)
chr4 (296-405)||(18689549-18689659)
chr4 (290-394)||(10494848-10494953)
chr4 (287-382)||(9260515-9260610)
chr4 (287-417)||(22486792-22486921)
chr4 (288-382)||(13990729-13990823)
chr4 (345-433)||(6659331-6659419)
chr4 (342-432)||(7723665-7723754)
chr4 (296-421)||(18657054-18657180)
chr4 (287-394)||(38888029-38888137)
chr4 (285-434)||(19935426-19935576)
chr4 (301-409)||(15848361-15848469)
chr4 (328-433)||(24667640-24667745)
chr4 (288-364)||(28897913-28897990)
chr4 (315-423)||(17254893-17255002)
chr4 (315-427)||(7724083-7724193)
chr4 (290-407)||(3675056-3675174)
chr4 (295-387)||(53477261-53477353)
chr4 (351-433)||(50515896-50515978)
chr4 (287-341)||(3765300-3765354)
chr4 (290-324)||(7635235-7635269)
chr4 (287-325)||(17255007-17255045)
chr4 (307-355)||(50519224-50519272)
chr4 (344-416)||(54700614-54700687)
[»] chr2 (31 HSPs)
chr2 (286-421)||(23457587-23457723)
chr2 (281-423)||(12966412-12966555)
chr2 (287-433)||(33051560-33051707)
chr2 (303-433)||(15129347-15129478)
chr2 (290-422)||(5171596-5171729)
chr2 (286-425)||(4184869-4185010)
chr2 (281-433)||(36647228-36647381)
chr2 (268-422)||(21772298-21772452)
chr2 (290-417)||(28737782-28737910)
chr2 (285-433)||(1518130-1518281)
chr2 (287-421)||(32163783-32163919)
chr2 (281-378)||(36615144-36615243)
chr2 (289-414)||(32161988-32162115)
chr2 (287-423)||(8294522-8294657)
chr2 (281-379)||(36648901-36649001)
chr2 (287-406)||(33053359-33053479)
chr2 (287-401)||(1218319-1218434)
chr2 (345-434)||(27952317-27952407)
chr2 (345-433)||(31636337-31636426)
chr2 (290-415)||(18945905-18946031)
chr2 (295-380)||(12123950-12124035)
chr2 (345-433)||(22011436-22011525)
chr2 (350-433)||(2155972-2156056)
chr2 (345-433)||(33655628-33655716)
chr2 (63-147)||(23457362-23457446)
chr2 (345-433)||(27956154-27956243)
chr2 (350-423)||(28737911-28737984)
chr2 (350-433)||(31634109-31634193)
chr2 (298-367)||(19582063-19582132)
chr2 (303-391)||(23456533-23456622)
chr2 (291-361)||(280076-280146)
[»] chr1 (28 HSPs)
chr1 (285-436)||(31915489-31915641)
chr1 (287-420)||(12944058-12944192)
chr1 (290-423)||(50713658-50713792)
chr1 (286-423)||(239628-239766)
chr1 (287-423)||(10925682-10925816)
chr1 (287-414)||(10927136-10927262)
chr1 (287-433)||(28660747-28660894)
chr1 (268-423)||(23987494-23987655)
chr1 (286-417)||(43681400-43681535)
chr1 (287-423)||(9030958-9031096)
chr1 (287-423)||(8221430-8221567)
chr1 (295-422)||(10928239-10928367)
chr1 (294-388)||(8967850-8967944)
chr1 (288-382)||(9194994-9195088)
chr1 (287-423)||(28661078-28661214)
chr1 (345-435)||(8931220-8931311)
chr1 (292-394)||(33152758-33152863)
chr1 (345-435)||(50857442-50857533)
chr1 (327-421)||(31913359-31913453)
chr1 (317-434)||(36694153-36694270)
chr1 (317-434)||(36710254-36710371)
chr1 (279-426)||(40058109-40058255)
chr1 (287-337)||(9199312-9199362)
chr1 (302-423)||(21903709-21903830)
chr1 (350-407)||(13444015-13444072)
chr1 (297-421)||(28659577-28659704)
chr1 (290-423)||(26981450-26981589)
chr1 (367-427)||(13441612-13441673)
[»] chr7 (38 HSPs)
chr7 (292-423)||(11000836-11000968)
chr7 (287-428)||(1365613-1365755)
chr7 (287-423)||(1369747-1369884)
chr7 (290-421)||(5934549-5934681)
chr7 (285-434)||(4888685-4888835)
chr7 (285-422)||(3778720-3778863)
chr7 (287-394)||(24840085-24840193)
chr7 (285-421)||(30217753-30217890)
chr7 (287-409)||(11228923-11229046)
chr7 (287-423)||(6451760-6451897)
chr7 (287-423)||(27142608-27142745)
chr7 (287-421)||(8916389-8916524)
chr7 (287-423)||(1786625-1786763)
chr7 (285-433)||(2767870-2768015)
chr7 (288-411)||(35814814-35814937)
chr7 (298-433)||(1874493-1874627)
chr7 (287-410)||(27309638-27309762)
chr7 (287-369)||(1690196-1690278)
chr7 (268-394)||(8063843-8063961)
chr7 (285-431)||(1883435-1883576)
chr7 (286-382)||(11228661-11228758)
chr7 (345-433)||(13882686-13882775)
chr7 (350-433)||(13886159-13886243)
chr7 (345-434)||(859155-859245)
chr7 (345-434)||(1217159-1217249)
chr7 (295-373)||(18790234-18790311)
chr7 (317-434)||(7803030-7803148)
chr7 (315-423)||(4133284-4133393)
chr7 (289-342)||(4955956-4956009)
chr7 (287-423)||(19404118-19404257)
chr7 (287-325)||(4133398-4133436)
chr7 (290-324)||(8915279-8915313)
chr7 (345-431)||(1220442-1220529)
chr7 (337-391)||(1753640-1753695)
chr7 (290-333)||(1785499-1785541)
chr7 (90-148)||(11001101-11001159)
chr7 (368-425)||(29175780-29175838)
chr7 (93-148)||(8915448-8915503)
[»] chr3 (16 HSPs)
chr3 (285-434)||(2472688-2472838)
chr3 (293-422)||(2107866-2107994)
chr3 (285-434)||(365592-365742)
chr3 (285-359)||(1320124-1320198)
chr3 (287-433)||(8536369-8536520)
chr3 (345-435)||(43303958-43304049)
chr3 (289-372)||(41152493-41152577)
chr3 (345-433)||(43306672-43306761)
chr3 (345-433)||(5128909-5128998)
chr3 (322-410)||(45168343-45168434)
chr3 (285-410)||(5324655-5324778)
chr3 (289-423)||(52708798-52708923)
chr3 (345-433)||(3063737-3063826)
chr3 (369-433)||(3068875-3068940)
chr3 (287-317)||(20400732-20400762)
chr3 (342-423)||(33175832-33175914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (287-421)||(9644-9780)
[»] chr5 (8 HSPs)
chr5 (287-423)||(22440799-22440936)
chr5 (287-415)||(492508-492638)
chr5 (300-423)||(26140298-26140422)
chr5 (285-423)||(18252356-18252495)
chr5 (295-423)||(8456389-8456520)
chr5 (298-387)||(19497351-19497441)
chr5 (345-432)||(21848966-21849054)
chr5 (345-435)||(40778784-40778875)
[»] chr6 (26 HSPs)
chr6 (289-433)||(27822118-27822264)
chr6 (290-413)||(1127199-1127323)
chr6 (268-427)||(18727849-18728011)
chr6 (287-420)||(32361310-32361443)
chr6 (302-435)||(33615502-33615636)
chr6 (287-418)||(11658873-11659005)
chr6 (290-423)||(12882067-12882202)
chr6 (307-421)||(8048978-8049092)
chr6 (285-387)||(24443118-24443220)
chr6 (345-433)||(3536034-3536123)
chr6 (287-423)||(12778417-12778547)
chr6 (352-423)||(18727115-18727186)
chr6 (296-355)||(34373865-34373924)
chr6 (345-433)||(3542245-3542334)
chr6 (315-411)||(33215185-33215282)
chr6 (268-332)||(14216818-14216882)
chr6 (350-433)||(30049921-30050005)
chr6 (345-427)||(29340812-29340895)
chr6 (295-417)||(22873762-22873887)
chr6 (328-415)||(14238419-14238507)
chr6 (350-406)||(30052208-30052264)
chr6 (298-427)||(22910754-22910885)
chr6 (352-432)||(18718201-18718279)
chr6 (290-379)||(24664209-24664298)
chr6 (290-394)||(33693866-33693969)
chr6 (301-427)||(22889215-22889343)
[»] scaffold0054 (3 HSPs)
scaffold0054 (287-420)||(37654-37786)
scaffold0054 (286-421)||(49263-49398)
scaffold0054 (299-427)||(10608-10738)
[»] scaffold0024 (2 HSPs)
scaffold0024 (289-434)||(145677-145823)
scaffold0024 (285-380)||(143974-144066)
[»] scaffold0240 (4 HSPs)
scaffold0240 (287-412)||(1599-1725)
scaffold0240 (287-417)||(15989-16119)
scaffold0240 (319-421)||(14821-14923)
scaffold0240 (290-341)||(14390-14442)
[»] scaffold0090 (1 HSPs)
scaffold0090 (291-406)||(15092-15207)
[»] scaffold0330 (1 HSPs)
scaffold0330 (290-412)||(17584-17707)
[»] scaffold0110 (2 HSPs)
scaffold0110 (322-433)||(46733-46846)
scaffold0110 (345-427)||(45268-45351)
[»] scaffold0531 (1 HSPs)
scaffold0531 (350-421)||(11601-11672)


Alignment Details
Target: chr8 (Bit Score: 164; Significance: 2e-87; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 374 - 545
Target Start/End: Original strand, 26378030 - 26378201
Alignment:
Q  374 gaacttgttcttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtcaaaccaaaaattgtttcatccaaaaatcaaatttagaatag 473  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26378030 gaacttgttcttttcaatctagatttagcgcttgctagcctacgcttccgtactacgtcaaaccaaaaattgtttcatccaaaaatcaaatttagaatag 26378129  T
Q  474 ttacatttatgtactttttggacccaatatgcaacacatttatttgcctcttcattactctagtgtttggac 545  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26378130 ttacatttatgtactttttggacccaatatgcaacacatttatttgcctcttcattactctagtttttggac 26378201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 26377695 - 26377834
Alignment:
Q  8 ttgccaagcaattatatttcactcaaatgggatccacgagagtagtctcttgtagtcttgttcattggaagattcaacatgcatcagaatgagaatttgg 107  Q
    |||||||||||||||||||||||||| | ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26377695 ttgccaagcaattatatttcactcaa-taggatccacgagggtggtctcttgtagtcttgttcattggaagattcaacatgcatcagaatgagaacttgg 26377793  T
Q  108 ggtctgagttcttcaaa-gtggaggagattgatgtaggaggg 148  Q
    |||| |||||||||||| |||||||||| |||||||||||||    
T  26377794 ggtc-gagttcttcaaaggtggaggagactgatgtaggaggg 26377834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 287 - 423
Target Start/End: Original strand, 14130107 - 14130244
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgt-tctt 385  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||| ||||||| ||||    
T  14130107 aacttttattcattcaataatattttggagagttttctcaatttctggtggattccggaaccttattttcacaaatttatcgcttgcaaacttgtctctt 14130206  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    ||| ||||| ||||| ||||||| ||||||||||||||    
T  14130207 ttcgatctagatttaacgcttgcaagcctacgcttccg 14130244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 285 - 433
Target Start/End: Original strand, 24730972 - 24731121
Alignment:
Q  285 ataacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt-c 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| | || | ||||||||||| ||||| |||||| |||||||| |    
T  24730972 ataacttttattcattcaataatattttagagagttttctcaatttttgatggattccgaaatcctattttcacaagtttgttgcttgcaaacttgttcc 24731071  T
Q  384 ttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtca 433  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  24731072 ttttcaatctaaatttagcgcttgctagcctacggttctgtactgcgtca 24731121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 281 - 433
Target Start/End: Complemental strand, 2189874 - 2189722
Alignment:
Q  281 aggcataacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg 380  Q
    |||||||||||||||||| ||||||||| |||||||  |||||||| ||| ||||||||||   |||| ||||||||||| |||||||||||| ||||||    
T  2189874 aggcataacttttattcaatcaataatactttagagttttttctcattttttggtggattccaaaaccttattttcacaagtttgtcgcttgcaaacttg 2189775  T
Q  381 ttcttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtca 433  Q
    |||||||||||| |  ||||||||||||||||||||||||||||||| |||||    
T  2189774 ttcttttcaatcgaggtttagcgcttgctagcctacgcttccgtactgcgtca 2189722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 281 - 420
Target Start/End: Original strand, 26374836 - 26374975
Alignment:
Q  281 aggcataacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg 380  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||  | |||| |||||| |||| |||||||||||||||||||    
T  26374836 aggcataacttttattcattcaataataatttagagagttttcttaatttctggtggatttcgaaaccctatttttacaagtttgtcgcttgcgaacttg 26374935  T
Q  381 ttcttttcaatctaaatttagcgcttgctagcctacgctt 420  Q
    ||||||||||||||   ||| ||||||||||| |||||||    
T  26374936 ttcttttcaatctaggcttaacgcttgctagcttacgctt 26374975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 287 - 422
Target Start/End: Original strand, 20693741 - 20693877
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttctt 385  Q
    ||||||||||  |||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||| || ||    
T  20693741 aacttttattacttcaataatactttagagagttttctcaatttctgatggattccggaaccatattttcacaaatttgtcgcttgcaaacttgtttatt 20693840  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttcc 422  Q
    |||||||||  |||| | || ||||||||||||||||    
T  20693841 ttcaatctaggtttaaccctcgctagcctacgcttcc 20693877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 26377952 - 26378033
Alignment:
Q  266 atagttgtagcttaaaggcataacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaac 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26377952 atagttgtagcttaaaggcataacttttattcattcaataatattttagagagttttctcaatttctagtggattctggaac 26378033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 290 - 423
Target Start/End: Original strand, 2687687 - 2687821
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc-ttttc 388  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||||| ||||||||| |||||    
T  2687687 ttttattcattcaataatatttcaaagagttttctcaatttcttgtggattctagaaccctattttcacaagtttgtcgcttgcaaacttgttctttttc 2687786  T
Q  389 aatctaaatttagcgcttgctagcctacgcttccg 423  Q
     |||||  ||||||||| ||||| || ||||||||    
T  2687787 tatctaggtttagcgctcgctagtcttcgcttccg 2687821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 287 - 410
Target Start/End: Original strand, 16598190 - 16598315
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaattt-ctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttct 384  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||| ||||||||||| |||||||| ||| |||||| ||||    
T  16598190 aacttttattcattcaataatattttagagagttttctcaatttactggtgtattttggaaccctattttcacaagtttgtcgcgtgcaaacttgtttct 16598289  T
Q  385 tttcaatctaaatttagcgcttgcta 410  Q
    ||  ||||||| ||||||||||||||    
T  16598290 ttctaatctaagtttagcgcttgcta 16598315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 306 - 435
Target Start/End: Original strand, 24731188 - 24731318
Alignment:
Q  306 atattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt-cttttcaatctaaatttagcgc 404  Q
    |||||||||||||||||||||||||||| || |||| | |||  ||||||||||| ||||| |||||| |||||||| ||||||||||||  ||||||||    
T  24731188 atattttagagagttttctcaatttctgatgaattccgaaactctattttcacaagtttgttgcttgcaaacttgttccttttcaatctaggtttagcgc 24731287  T
Q  405 ttgctagcctacgcttccgtactacgtcaaa 435  Q
    ||||||||||||||| ||||||| |||||||    
T  24731288 ttgctagcctacgctcccgtactgcgtcaaa 24731318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 438 - 545
Target Start/End: Original strand, 26380482 - 26380591
Alignment:
Q  438 aaaaattgtttcatccaaaaatcaaatttagaatagttac--atttatgtactttttggacccaatatgcaacacatttatttgcctcttcattactcta 535  Q
    ||||||||||||||| |||||| ||||||| |||||||||  ||||| ||| |||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  26380482 aaaaattgtttcatcaaaaaattaaatttaaaatagttaccaatttacgtagtttttggacctaatctgcaacacatttatttgcctcttcattgctcta 26380581  T
Q  536 gtgtttggac 545  Q
     | |||||||    
T  26380582 ctttttggac 26380591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 289 - 382
Target Start/End: Complemental strand, 2609640 - 2609547
Alignment:
Q  289 cttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt 382  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||| |||| ||||||||||| |||||| ||||| ||||||||    
T  2609640 cttttattcattcaataatatttcagagagctttatcaatttctggtgaattctgtaaccctattttcacaagtttgtcacttgcaaacttgtt 2609547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 406
Target Start/End: Complemental strand, 24578924 - 24578804
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttctt 385  Q
    |||||||||| ||| |||||||||||||||||||||| |||||||| ||||||||  ||||| |||||||||| ||||  ||||||| |||||| |||||    
T  24578924 aacttttatttattaaataatattttagagagttttcacaatttctagtggattccagaaccctattttcacagatttaccgcttgcaaacttgtttctt 24578825  T
Q  386 ttcaatctaaatttagcgctt 406  Q
    ||| |||||  ||||||||||    
T  24578824 ttcgatctaggtttagcgctt 24578804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 16598108 - 16598181
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaa 360  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||  |||||| |||||||||||    
T  16598108 aacttttattcattcaataatattttagagagttttctcagtttctggtgtatttcggaaccctattttcacaa 16598181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 287 - 340
Target Start/End: Original strand, 30440679 - 30440732
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggatt 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30440679 aacttttattcattcaataatattttagagagttttctcaatttctggtggatt 30440732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 290 - 393
Target Start/End: Original strand, 2689092 - 2689195
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttc 388  Q
    |||||||| |||||||| |||| |||||||||||||||||||| |||||| | |||||| ||||||||||  |||||||||||| |||||| ||||||||    
T  2689092 ttttattctttcaataaaatttcagagagttttctcaatttct-gtggatgccggaaccctattttcacagttttgtcgcttgcaaacttgtttcttttc 2689190  T
Q  389 aatct 393  Q
    |||||    
T  2689191 aatct 2689195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 322 - 410
Target Start/End: Original strand, 18468626 - 18468714
Alignment:
Q  322 tctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgcta 410  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||||||||| | |||||||||||| | |||  ||||||||||||||    
T  18468626 tctcaatttctggtggattccggaaccctattttcacaagtttgtcgcttgcaagcttgttcttttctacctaggtttagcgcttgcta 18468714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 289 - 381
Target Start/End: Complemental strand, 24577673 - 24577581
Alignment:
Q  289 cttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgt 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||  |||||||||  ||||||  |||| |||||||    
T  24577673 cttttattcattcaataatattttagagagttttctcaatttctggtggattacgaaaccccattttcacatgtttgtcatttgcaaacttgt 24577581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 378
Target Start/End: Complemental strand, 2188495 - 2188397
Alignment:
Q  282 ggcataacttttattcattcaataatattttagagag--ttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaact 378  Q
    ||||||||||||||||| |||||||||||||||||||  |||||| |||||||||||||||   ||||| |||||| |||| |||||||||||| ||||    
T  2188495 ggcataacttttattcaatcaataatattttagagagttttttcttaatttctggtggatttcagaaccctatttttacaattttgtcgcttgcaaact 2188397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 382
Target Start/End: Complemental strand, 25479548 - 25479457
Alignment:
Q  291 tttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt 382  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||||||||| |||||| |||||||| | ||||||| ||||| | ||||||    
T  25479548 tttattcattcaataaaatttcagagagttttctcaaattctggtggattccggaaccttattttcaaagatttgtcacttgcaaccttgtt 25479457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 350 - 421
Target Start/End: Original strand, 42890397 - 42890468
Alignment:
Q  350 tattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcctacgcttc 421  Q
    ||||||||||| |||||||||||| |||||||||||||| |||||  |||||||||||||||||||||||||    
T  42890397 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctagcctacgcttc 42890468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 433
Target Start/End: Complemental strand, 22926737 - 22926648
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| |||||  |||||||||| || | ||||||||||||||||||||||    
T  22926737 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgctttctaaccctacgcttccgtactacgtca 22926648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 425
Target Start/End: Complemental strand, 42891753 - 42891672
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctag-cctacgcttccgta 425  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| |||||  ||||||||||||||| ||||||||||||||    
T  42891753 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctagccctacgcttccgta 42891672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 433
Target Start/End: Complemental strand, 22921939 - 22921850
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    |||| ||||||||||| |||||||||||| ||||| |||||||| |||||  ||||||||||||| | |||||||||||||||| |||||    
T  22921939 aaccctattttcacaagtttgtcgcttgcaaacttattcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 22921850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 425
Target Start/End: Original strand, 23570584 - 23570665
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgta 425  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| |||||  ||||||||||||| | ||||||||||||||    
T  23570584 aaccttattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgta 23570665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 433
Target Start/End: Original strand, 6845336 - 6845425
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    |||| ||||||||||| ||| |||||||  |||||||||||||| |||||  ||||||||||||| | |||||||||||||||| |||||    
T  6845336 aaccctattttcacaagtttatcgcttgtaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 6845425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 433
Target Start/End: Complemental strand, 22512135 - 22512046
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| | |||  ||||||||||||| | ||||| |||||||||| |||||    
T  22512135 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctacctaggtttagcgcttgctaaccctacacttccgtactgcgtca 22512046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 433
Target Start/End: Complemental strand, 22519435 - 22519346
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| | |||  ||||||||||||| | ||||| |||||||||| |||||    
T  22519435 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctacctaggtttagcgcttgctaaccctacacttccgtactgcgtca 22519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 28263905 - 28263840
Alignment:
Q  295 ttcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaa 360  Q
    |||||||||||||||||||||||||||||  |||||||| |||| ||| ||||| |||||||||||    
T  28263905 ttcattcaataatattttagagagttttcataatttctgctggactctagaaccctattttcacaa 28263840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 345 - 422
Target Start/End: Complemental strand, 22520888 - 22520810
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttcc 422  Q
    |||| |||||||||||||||||||||||| |||||| ||||||| | |||  ||||||||||||| | |||||||||||    
T  22520888 aaccctattttcacaaatttgtcgcttgcaaacttgatcttttctacctaggtttagcgcttgctaaccctacgcttcc 22520810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 345 - 434
Target Start/End: Original strand, 37189866 - 37189956
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtcaa 434  Q
    |||| ||||||||||| |||||||||||| ||||| |||||||| |||||  ||||| ||||||| | |||| ||||||||||| ||||||    
T  37189866 aaccctattttcacaagtttgtcgcttgcaaacttattcttttctatctagttttagagcttgctaaccctaagcttccgtactgcgtcaa 37189956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 30442450 - 30442514
Alignment:
Q  268 agttgtagcttaaaggcataacttttattcattcaataatattttagagagttttctcaatttct 332  Q
    ||||||||| |||||   || ||||| ||||||||||||||||||| ||||||||||||||||||    
T  30442450 agttgtagcctaaagaggtatcttttgttcattcaataatattttaaagagttttctcaatttct 30442514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 420
Target Start/End: Complemental strand, 31072271 - 31072134
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttt--- 386  Q
    |||||||| ||||||||| |||||||||||||||||| | || | ||||||   ||||| |||||||| || ||| || ||||| ||||| || |||       
T  31072271 ttttattccttcaataatgttttagagagttttctcagtgtcggttggattgcagaaccctattttcataagtttatctcttgcaaacttttttttttaa 31072172  T
Q  387 ----tcaatctaaatttagcgcttgctagcctacgctt 420  Q
        ||||||||  ||||||||||||||||||||||||    
T  31072171 tttctcaatctaggtttagcgcttgctagcctacgctt 31072134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 18180749 - 18180713
Alignment:
Q  397 tttagcgcttgctagcctacgcttccgtactacgtca 433  Q
    ||||||||||||||||||||||||||||||| |||||    
T  18180749 tttagcgcttgctagcctacgcttccgtactgcgtca 18180713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 10629265 - 10629211
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattc 341  Q
    ||||||||||| || |||||||||||||| | |||||||||||| ||||| ||||    
T  10629265 aacttttattcgttaaataatattttagaaaattttctcaatttttggtgaattc 10629211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 287 - 423
Target Start/End: Complemental strand, 13991526 - 13991389
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttctt 385  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||| ||  |||||||||||| |||||| |||||    
T  13991526 aacttttattcattcaataatattttagagagttttctcaaattctggtggattccagaaccttattttcgcatgtttgtcgcttgcaaacttgtttctt 13991427  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  13991426 ttcaatctagatttagcgcttgctagcctacgcttccg 13991389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 285 - 425
Target Start/End: Original strand, 40206088 - 40206229
Alignment:
Q  285 ataacttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc 383  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||||||||| |||| | |||  ||||||||||| ||||||||||||||||||||      
T  40206088 ataatttttattcattcaataatattttagagaatttttctcaatttctggtgaattccgaaacactattttcacaagtttgtcgcttgcgaacttgtct 40206187  T
Q  384 ttttcaatctaaatttagcgcttgctagcctacgcttccgta 425  Q
     ||||||| || ||||||||||||||||||||||||||||||    
T  40206188 ctttcaatttagatttagcgcttgctagcctacgcttccgta 40206229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 287 - 421
Target Start/End: Original strand, 7634022 - 7634157
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt-ctt 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||| ||||| ||| ||| |||| |||||||| |||    
T  7634022 aacttttattcattcaataatattttagagagttttctcaatttctggtggattccagaactctatttccacaagtttatcgtttgcaaacttgttcctt 7634121  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttc 421  Q
    |||||||||  |||| ||||| ||||| ||||||||    
T  7634122 ttcaatctaggtttaacgcttactagcatacgcttc 7634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 290 - 427
Target Start/End: Complemental strand, 21433707 - 21433569
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc-ttttc 388  Q
    |||||||||||||||||||||||||||| |||||||||||| || || ||||||||||| |||||||| || ||||||||||||||| |||||| |||||    
T  21433707 ttttattcattcaataatattttagagaattttctcaatttatgatgaattctggaaccctattttcataagtttgtcgcttgcgaatttgttctttttc 21433608  T
Q  389 aatctaaatttagcgcttgctagcctacgcttccgtact 427  Q
     |||||  |||||| |  ||||  |||||||||||||||    
T  21433607 tatctaggtttagcaccagctatactacgcttccgtact 21433569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 296 - 405
Target Start/End: Complemental strand, 18689659 - 18689549
Alignment:
Q  296 tcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaac-ttgttcttttcaatcta 394  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| ||| ||| || ||||||||||||||    
T  18689659 tcattcaataatattttatagagttttctcaatttctggtggattctgcaaccctatttttacaagtttgtcgcatgcaaacttttttcttttcaatcta 18689560  T
Q  395 aatttagcgct 405  Q
      |||||||||    
T  18689559 ggtttagcgct 18689549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 290 - 394
Target Start/End: Original strand, 10494848 - 10494953
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttc 388  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||  ||||||||||  |||||| ||||| |||||| ||||||||    
T  10494848 ttttattcattcaataatattttagagagttttctcaatttctggtgaattccggaactctattttcacaggtttgtcacttgcaaacttgtttcttttc 10494947  T
Q  389 aatcta 394  Q
     |||||    
T  10494948 catcta 10494953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 382
Target Start/End: Original strand, 9260515 - 9260610
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt 382  Q
    |||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||| ||||||| ||| ||||||| |||| ||||||||    
T  9260515 aactattattcattcaattatattttagatagttttctcaatttctggtggattctgaaaccctattttcgcaagtttgtcgtttgcaaacttgtt 9260610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 417
Target Start/End: Complemental strand, 22486921 - 22486792
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc-tt 385  Q
    |||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||| |||||| ||||||||| || ||||||||||| |||||| || ||    
T  22486921 aacttttatttattccataatgtttcagagagttttctcaatttctggtggattccggaacc-tattttcac-aagttgtcgcttgcaaacttggtcttt 22486824  T
Q  386 ttcaatctaaatttagcgcttgctagcctacg 417  Q
    ||| || ||  |||||||||||||||||||||    
T  22486823 ttctatataggtttagcgcttgctagcctacg 22486792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 288 - 382
Target Start/End: Complemental strand, 13990823 - 13990729
Alignment:
Q  288 acttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt 382  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||  ||||| ||||||||||| |||||  ||||| ||||||||    
T  13990823 acttttattcattcaataatattttagagagttttttcaatttctgatggattccagaaccctattttcacaagtttgttacttgcaaacttgtt 13990729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 345 - 433
Target Start/End: Complemental strand, 6659419 - 6659331
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtca 433  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| ||||| ||||||||||||||| ||||| |||||||||| |||||    
T  6659419 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctagatttagcgcttgctaacctacacttccgtactgcgtca 6659331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 342 - 432
Target Start/End: Complemental strand, 7723754 - 7723665
Alignment:
Q  342 tggaaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtc 432  Q
    ||||||| ||||||||||| ||||| |||||| ||||||||||||||||||| | ||||||||||||||||||||||||| ||||| ||||    
T  7723754 tggaaccctattttcacaagtttgtagcttgcaaacttgttcttttcaatct-agtttagcgcttgctagcctacgcttctgtactgcgtc 7723665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 421
Target Start/End: Complemental strand, 18657180 - 18657054
Alignment:
Q  296 tcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaac-ttgttcttttcaatcta 394  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||| || | |||||| |||| |||||||| ||| ||| || ||||||||||||||    
T  18657180 tcattcaataatattttatagagttttctcaatttccggtggattctgaaatcctatttttacaagtttgtcgcatgcaaacttttttcttttcaatcta 18657081  T
Q  395 aatttagcgcttgctagcctacgcttc 421  Q
      ||||| |||  ||||| ||||||||    
T  18657080 ggtttagtgctctctagcttacgcttc 18657054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 38888137 - 38888029
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttctt 385  Q
    |||||||||||||||||  |||||||||||| ||||||||||||||  ||||||| | |||| ||||||||||| |||||||||||| || ||| || ||    
T  38888137 aacttttattcattcaaccatattttagagaattttctcaatttctaatggattccgaaaccctattttcacaagtttgtcgcttgcaaatttgtttatt 38888038  T
Q  386 ttcaatcta 394  Q
    |||||||||    
T  38888037 ttcaatcta 38888029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 285 - 434
Target Start/End: Original strand, 19935426 - 19935576
Alignment:
Q  285 ataacttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc 383  Q
    |||||||||||||| |||||  ||||||||||| |||| |||||||| || || ||||   |||| |||||||| || |||||||||||| || || ||     
T  19935426 ataacttttattcaatcaatgttattttagagaatttttctcaatttttgatgaattccataaccctattttcataagtttgtcgcttgcaaatttattt 19935525  T
Q  384 ttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtcaa 434  Q
    ||||| |||| | ||||||||| ||||||||||||||| ||||| ||||||    
T  19935526 ttttctatctgagtttagcgctggctagcctacgcttctgtactgcgtcaa 19935576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 409
Target Start/End: Original strand, 15848361 - 15848469
Alignment:
Q  301 caataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttcaatctaaattt 399  Q
    ||||| |||||||||||||||||||||||| |||||||||  |||||  | ||||||||| |||||| ||||| |||||| |||||||||||||| ||||    
T  15848361 caatagtattttagagagttttctcaatttttggtggatttcggaactctcttttcacaattttgtcacttgc-aacttgtttcttttcaatctagattt 15848459  T
Q  400 agcgcttgct 409  Q
    |||| |||||    
T  15848460 agcgtttgct 15848469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 433
Target Start/End: Original strand, 24667640 - 24667745
Alignment:
Q  328 tttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcctacgcttccgtact 427  Q
    ||||| |||||||| |||||| ||||||||||| ||||| || ||||| ||| |||||||| |||||  |||| ||||||||||||||||||||| ||||    
T  24667640 tttctagtggattccggaaccctattttcacaagtttgttgcctgcgagcttcttcttttctatctaggtttaacgcttgctagcctacgcttccatact 24667739  T
Q  428 acgtca 433  Q
     |||||    
T  24667740 gcgtca 24667745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 28897913 - 28897990
Alignment:
Q  288 acttttattcattcaataatattttagagagttttctcaa-tttctggtggattctggaaccatattttcacaaattt 364  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||  |||||||||||||||    
T  28897913 acttttattcattcaataatattttaaagacttttctcaattttctggtggattccggaacattattttcacaaattt 28897990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 315 - 423
Target Start/End: Complemental strand, 17255002 - 17254893
Alignment:
Q  315 agagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttctt-ttcaatctaaatttagcgcttgctagcc 413  Q
    |||||||||||||||||| | |||||   ||||  ||||||||||| |||||||||||  || |||||| | |||||||||| ||||||| |||||||||    
T  17255002 agagttttctcaatttctaggggatttcagaactctattttcacaagtttgtcgcttgaaaatttgttcatcttcaatctaagtttagcgtttgctagcc 17254903  T
Q  414 tacgcttccg 423  Q
    ||||||||||    
T  17254902 tacgcttccg 17254893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 315 - 427
Target Start/End: Complemental strand, 7724193 - 7724083
Alignment:
Q  315 agagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttcaatctaaatttagcgcttgctagcc 413  Q
    ||||||||||||||||||||||||||| |||||| |||||||   | ||||||||| || |||||| ||||||||||| ||  |||||| |||||||||     
T  7724193 agagttttctcaatttctggtggattccggaaccctattttc---agtttgtcgctcgcaaacttgcttcttttcaatataggtttagcacttgctagca 7724097  T
Q  414 tacgcttccgtact 427  Q
    |||| ||| |||||    
T  7724096 tacgtttctgtact 7724083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 290 - 407
Target Start/End: Original strand, 3675056 - 3675174
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttc 388  Q
    |||||||| |||||||| |||| |||||||||||| |||||||||||||||| | |||  || |||||   |||| ||| |||| |||||| ||||||||    
T  3675056 ttttattcgttcaataaaatttaagagagttttcttaatttctggtggattccgaaactttaatttcatggatttatcgtttgcaaacttgtttcttttc 3675155  T
Q  389 aatctaaatttagcgcttg 407  Q
    |||||| ||||||| ||||    
T  3675156 aatctatatttagcacttg 3675174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 387
Target Start/End: Complemental strand, 53477353 - 53477261
Alignment:
Q  295 ttcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttctttt 387  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||  ||||  |||||||||  |||| ||||||  |||||||| ||||    
T  53477353 ttcattcaatatatttttagagagttttctcaatttctggtggattctaaaaccccattttcacaggtttgacgcttgtaaacttgttttttt 53477261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 433
Target Start/End: Complemental strand, 50515978 - 50515896
Alignment:
Q  351 attttcacaaatttgtcgcttgcgaacttg-ttcttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtca 433  Q
    |||||||||| |||||||||||| |||||| ||||| ||| ||||| | |||||||||||||||| |||||||| |||||||||    
T  50515978 attttcacaagtttgtcgcttgcaaacttgtttcttctcagtctaagtgtagcgcttgctagcctccgcttccg-actacgtca 50515896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 3765354 - 3765300
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattc 341  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| ||||| ||||    
T  3765354 aacttttatttattcaataatatttttgagagttttctcaatttttggtgaattc 3765300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 324
Target Start/End: Original strand, 7635235 - 7635269
Alignment:
Q  290 ttttattcattcaataatattttagagagttttct 324  Q
    |||||||||||||||||||||||||||||||||||    
T  7635235 ttttattcattcaataatattttagagagttttct 7635269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 325
Target Start/End: Complemental strand, 17255045 - 17255007
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctc 325  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  17255045 aacttatattcattcaataatattttagagagttttctc 17255007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 355
Target Start/End: Complemental strand, 50519272 - 50519224
Alignment:
Q  307 tattttagagagttttctcaatttctggtggattctggaaccatatttt 355  Q
    |||||||||||||||||||||||||| ||||||||  ||||| ||||||    
T  50519272 tattttagagagttttctcaatttctagtggattccagaaccctatttt 50519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 54700687 - 54700614
Alignment:
Q  344 gaaccatattttcacaaatttgtcgcttgcgaacttgtt-cttttcaatctaaatttagcgcttgctagcctac 416  Q
    ||||| |||| |||||| |||||| ||||| |||||||| ||||||||| ||  ||||||| ||||||||||||    
T  54700687 gaaccctattctcacaagtttgtcacttgcaaacttgtttcttttcaatataggtttagcgtttgctagcctac 54700614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 5e-45; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 286 - 421
Target Start/End: Original strand, 23457587 - 23457723
Alignment:
Q  286 taacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttct 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||| |||||||||||| |||||| || |    
T  23457587 taacttttattcattcaataatattttagagagttttctcaatttttggtggattccggaaccctattttcacaagtttgtcgcttgcaaacttgtttat 23457686  T
Q  385 tttcaatctaaatttagcgcttgctagcctacgcttc 421  Q
    ||||||||||  |||||||||||||||||||| ||||    
T  23457687 tttcaatctaggtttagcgcttgctagcctacacttc 23457723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 281 - 423
Target Start/End: Original strand, 12966412 - 12966555
Alignment:
Q  281 aggcataacttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaactt 379  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||  |||||| ||||||||||| || |||||||||||||||    
T  12966412 aggcataacttttattcaatcaataatattttagagagtttttctcaatttttggtggatttcggaaccctattttcacaagttcgtcgcttgcgaactt 12966511  T
Q  380 gttcttttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    ||||||||||||||| ||||| || ||||||||||| |||||||    
T  12966512 gttcttttcaatctagatttaacgtttgctagcctatgcttccg 12966555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 287 - 433
Target Start/End: Original strand, 33051560 - 33051707
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc-tt 385  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||| || |||||||||||| ||||||||| ||    
T  33051560 aacttatattcattcaataatattttagagagttttctcaatttctagtggattccagaaccctattttcaaaagtttgtcgcttgcaaacttgttcttt 33051659  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtca 433  Q
    |||||| ||  ||||||||||||||||||| |||||||||||||||||    
T  33051660 ttcaatttaggtttagcgcttgctagcctaagcttccgtactacgtca 33051707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 303 - 433
Target Start/End: Original strand, 15129347 - 15129478
Alignment:
Q  303 ataatattttagagagttttctcaattt-ctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttag 401  Q
    ||||||||| ||||| ||||||| |||| ||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||  |||||    
T  15129347 ataatatttcagagacttttctctattttctggttgattctggaaccctattttcacaagtttgtcgcttgcgaacttgttcttttctatctaggtttag 15129446  T
Q  402 cgcttgctagcctacgcttccgtactacgtca 433  Q
    ||||||||||||||||||||||||||||||||    
T  15129447 cgcttgctagcctacgcttccgtactacgtca 15129478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 290 - 422
Target Start/End: Complemental strand, 5171729 - 5171596
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgt-tcttttc 388  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| |||| |||||||||||| ||||||| |||||||    
T  5171729 ttttattcattaaataatattttagagagttttctcaatttctagtggattcttgaaccctatttttacaagtttgtcgcttgcaaacttgtctcttttc 5171630  T
Q  389 aatctaaatttagcgcttgctagcctacgcttcc 422  Q
    |||||| |||||||||||| || |||||||||||    
T  5171629 aatctagatttagcgcttgttaacctacgcttcc 5171596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 286 - 425
Target Start/End: Original strand, 4184869 - 4185010
Alignment:
Q  286 taacttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaactt-gttc 383  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | |||| ||||||||||| ||||||||||||||||||  |||    
T  4184869 taacttttattcattcaataatattttagagagtttttctcaatttctcgtggattccgaaaccctattttcacaagtttgtcgcttgcgaacttatttc 4184968  T
Q  384 ttttcaatctaaatttagcgcttgctagcctacgcttccgta 425  Q
    |||| |||||| ||||||  |||| |||||||||||||||||    
T  4184969 ttttgaatctatatttagtacttgttagcctacgcttccgta 4185010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 281 - 433
Target Start/End: Original strand, 36647228 - 36647381
Alignment:
Q  281 aggcataacttttattcattcaataatattttagagagttttc-tcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaactt 379  Q
    |||||||||||||||||| ||||||||| |||||||  ||||| ||| ||| ||||||||||   |||| ||||||||||| |||||||||||| |||||    
T  36647228 aggcataacttttattcaatcaataatactttagagttttttcctcattttttggtggattccaaaaccctattttcacaagtttgtcgcttgcaaactt 36647327  T
Q  380 gttcttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtca 433  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||||| |||||    
T  36647328 gttcttttcaatcgaggtttagcgcttgctagcctacgcttccgtactgcgtca 36647381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 268 - 422
Target Start/End: Original strand, 21772298 - 21772452
Alignment:
Q  268 agttgtagcttaaaggcataacttttattcattcaataatatttta-gagagttttctcaatttctggtggattctggaaccatattttcacaaatttgt 366  Q
    |||||||||||||  | ||||||||||||| ||||||||||||| | ||||||||||||||||| || ||||||| |||||| |||||||| || |||||    
T  21772298 agttgtagcttaagag-ataacttttattcgttcaataatatttcaagagagttttctcaatttgtgatggattcaggaaccctattttcataagtttgt 21772396  T
Q  367 cgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcctacgcttcc 422  Q
    ||||||| |||||||| |||||||||||| ||||||| | |||| |||||||||||    
T  21772397 cgcttgcaaacttgtttttttcaatctaagtttagcgttggctaacctacgcttcc 21772452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 290 - 417
Target Start/End: Original strand, 28737782 - 28737910
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaa-atttgtcgcttgcgaacttgttcttttc 388  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||  |||||||||||  |||||| ||||| |||||  |||||||    
T  28737782 ttttattcattcaataatattttagagagttttctcaatttctgttggattctgaaactctattttcacaagttttgtctcttgcaaacttactcttttc 28737881  T
Q  389 aatctaaatttagcgcttgctagcctacg 417  Q
    ||| ||  |||||||||||||||||||||    
T  28737882 aatttaggtttagcgcttgctagcctacg 28737910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 285 - 433
Target Start/End: Original strand, 1518130 - 1518281
Alignment:
Q  285 ataacttttattcattcaataatattttagagagtttt---ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgt 381  Q
    ||||||| |||||| | |||||||||||||| ||||||   |||||||||| |||||||  |||||| |||||||| || || |||||||||||||||||    
T  1518130 ataacttatattcaataaataatattttagaaagtttttttctcaatttctagtggatttcggaaccctattttcataagttcgtcgcttgcgaacttgt 1518229  T
Q  382 tcttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtca 433  Q
     | ||||||||||  || ||||||||||||  |||||||||||||| |||||    
T  1518230 ccctttcaatctaggttaagcgcttgctaggatacgcttccgtactgcgtca 1518281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 287 - 421
Target Start/End: Complemental strand, 32163919 - 32163783
Alignment:
Q  287 aacttttattcattcaataatattttagag-agttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaactt-gttct 384  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |  ||||||| | |||||||||||||||| |||| ||||| | |||||  ||||    
T  32163919 aacttttattcattcaataatattttagagaagttttctcaatttatcatggattccgaaaccatattttcacaagtttgacgcttacaaacttatttct 32163820  T
Q  385 tttcaatctaaatttagcgcttgctagcctacgcttc 421  Q
    ||||||||||  |||| ||||| ||||||| ||||||    
T  32163819 tttcaatctaggtttaacgctttctagccttcgcttc 32163783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 281 - 378
Target Start/End: Original strand, 36615144 - 36615243
Alignment:
Q  281 aggcataacttttattcattcaataatattttagagag--ttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaact 378  Q
    |||||||||||||||||| |||||||||||||||||||  |||||| |||||||||||||||| |||||| |||||| |||| |||||||||||| ||||    
T  36615144 aggcataacttttattcaatcaataatattttagagagttttttcttaatttctggtggattccggaaccttatttttacaattttgtcgcttgcaaact 36615243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 289 - 414
Target Start/End: Complemental strand, 32162115 - 32161988
Alignment:
Q  289 cttttattcattcaataatattttagaga-gttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttt 386  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||  ||||| ||||||||||| |||||| ||||| |||||| ||||||    
T  32162115 cttttatttattcaataatattttagagaagttttctcagtttctggtggattcctgaaccctattttcacaagtttgtcacttgcaaacttgtttcttt 32162016  T
Q  387 tcaatctaaatttagcgcttgctagcct 414  Q
    || |||||  |||| |||||||| ||||    
T  32162015 tcgatctaggtttaacgcttgcttgcct 32161988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 287 - 423
Target Start/End: Original strand, 8294522 - 8294657
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttctt- 385  Q
    |||||||||||| | |||||||||||||||  |||| ||||||||||||||||| || |||  |||||| |||| |||||||||||| ||| |||||||     
T  8294522 aacttttattcaatgaataatattttagag--ttttttcaatttctggtggattatgaaacactatttttacaagtttgtcgcttgcaaacgtgttcttc 8294619  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    ||| |||||| |||||| |||||||||||| |||||||    
T  8294620 ttctatctaagtttagcacttgctagcctatgcttccg 8294657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 281 - 379
Target Start/End: Original strand, 36648901 - 36649001
Alignment:
Q  281 aggcataacttttattcattcaataatattttagagag--ttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaact 378  Q
    |||||||||||||||||| |||||||||||||||||||  |||||| ||||||||||||||||  ||||| |||||| |||| |||||||||||| ||||    
T  36648901 aggcataacttttattcaatcaataatattttagagagttttttcttaatttctggtggattccagaaccctatttttacaattttgtcgcttgcaaact 36649000  T
Q  379 t 379  Q
    |    
T  36649001 t 36649001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 287 - 406
Target Start/End: Original strand, 33053359 - 33053479
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc-tt 385  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||| ||||    ||||  ||||||| || |||||||||| | ||||| ||| ||    
T  33053359 aacttttattcattcaataatattttagaggattttctcaatttctggtagatttcataacccgattttcataattttgtcgcttacaaacttattcttt 33053458  T
Q  386 ttcaatctaaatttagcgctt 406  Q
    ||||||||| |||||||||||    
T  33053459 ttcaatctagatttagcgctt 33053479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 401
Target Start/End: Complemental strand, 1218434 - 1218319
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc-tt 385  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||  | |||| || ||   ||||||||||||||||||| || | ||||| ||| ||    
T  1218434 aacttttattcattcaataatattttagagaattttctcaatttctaatagattatgaaattctattttcacaaatttgtcgtttacaaacttattcttt 1218335  T
Q  386 ttcaatctaaatttag 401  Q
    |||||||||| |||||    
T  1218334 ttcaatctaagtttag 1218319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 345 - 434
Target Start/End: Complemental strand, 27952407 - 27952317
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtcaa 434  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| |||||  ||||||||||||| | |||||||||||||||| ||||||    
T  27952407 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcaa 27952317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 433
Target Start/End: Original strand, 31636337 - 31636426
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    |||||||||||||||| |||||||||||| |||| ||||||||| |||||  ||||||||||||| | |||||||||||||||| |||||    
T  31636337 aaccatattttcacaagtttgtcgcttgcaaactagttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 31636426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 415
Target Start/End: Original strand, 18945905 - 18946031
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaactt-gttcttttc 388  Q
    |||| ||||||||||||||||||||||| |||| | ||||||||||| |||| |||||  | || |||||| |||||||||||| || ||  ||||| ||    
T  18945905 ttttgttcattcaataatattttagagaattttattaatttctggtgaattccggaactctgttctcacaagtttgtcgcttgcaaatttatttcttctc 18946004  T
Q  389 aatctaaatttagcgcttgctagccta 415  Q
    ||||||  |||||||||||||| ||||    
T  18946005 aatctacgtttagcgcttgctaaccta 18946031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 380
Target Start/End: Complemental strand, 12124035 - 12123950
Alignment:
Q  295 ttcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg 380  Q
    ||||||| |||| |||| ||||| |||||||||||| ||||||||||  ||||||||||||||||  |||||||||||| ||||||    
T  12124035 ttcattctataaaatttcagagatttttctcaatttttggtggattcctgaaccatattttcacaggtttgtcgcttgcaaacttg 12123950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 433
Target Start/End: Original strand, 22011436 - 22011525
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    |||| ||||||||||| |||||| ||||| |||||||||||||| |||||  ||||||||||||| | |||||||||||||||| |||||    
T  22011436 aaccctattttcacaagtttgtcacttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 22011525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 433
Target Start/End: Original strand, 2155972 - 2156056
Alignment:
Q  350 tattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    ||||||||||| ||||||||| || |||||||||||||| |||||  ||||||||||||| | |||||||||||||||| |||||    
T  2155972 tattttcacaagtttgtcgctcgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 2156056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 433
Target Start/End: Original strand, 33655628 - 33655716
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtca 433  Q
    |||| ||||||||||| |||||||||||| |||||||  ||||| |||||  |||||||||||||| ||||| |||||||||| |||||    
T  33655628 aaccctattttcacaagtttgtcgcttgcaaacttgtatttttctatctaggtttagcgcttgctaacctacacttccgtactgcgtca 33655716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 23457362 - 23457446
Alignment:
Q  63 tcttgttcattggaagattcaacatgcatcagaatgagaatttggggtctgagttcttca-aagtggaggagattgatgtaggagg 147  Q
    ||||||||||||||| ||||||||||||||||||||||||  | ||||| |||||||||| | ||||||| || ||||||||||||    
T  23457362 tcttgttcattggaatattcaacatgcatcagaatgagaa-ctcgggtcagagttcttcagaggtggaggcgactgatgtaggagg 23457446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 433
Target Start/End: Complemental strand, 27956243 - 27956154
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    |||| |||||||| |  |||||||||||| |||||||||||||| |||||  ||||||||||||| | |||||||||||||||| |||||    
T  27956243 aaccctattttcataggtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 27956154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 28737911 - 28737984
Alignment:
Q  350 tattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    |||||||| || |||||||||||| |||||| |||||||||||||  |||||| |||||||| |||||||||||    
T  28737911 tattttcaaaagtttgtcgcttgcaaacttgctcttttcaatctaggtttagcacttgctagactacgcttccg 28737984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 433
Target Start/End: Original strand, 31634109 - 31634193
Alignment:
Q  350 tattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    ||||||||||| ||||||||| || |||||||||||||| |||||  ||||||| ||||| | |||||||||||||||| |||||    
T  31634109 tattttcacaagtttgtcgctagcaaacttgttcttttctatctaggtttagcgtttgctaaccctacgcttccgtactgcgtca 31634193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 19582063 - 19582132
Alignment:
Q  298 attcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtc 367  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||  ||||| | |||||||| |||||||    
T  19582063 attcaataatattttagagagttttttcaatttctagtgaattcgagaacccttttttcacagatttgtc 19582132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 391
Target Start/End: Original strand, 23456533 - 23456622
Alignment:
Q  303 ataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttcaat 391  Q
    ||||||||| | |||||||||||| |||| |||||||||  ||||  |||||||| || |||||||||||| |||||| |||||||||||    
T  23456533 ataatatttcaaagagttttctcagtttccggtggattccagaactttattttcaaaagtttgtcgcttgcaaacttgtttcttttcaat 23456622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 280146 - 280076
Alignment:
Q  291 tttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaa 361  Q
    |||||| ||||||| |||||||| ||||||||||||||||  | |||||||  ||||| ||||||||||||    
T  280146 tttattaattcaatgatattttaaagagttttctcaattttcgatggattcaagaaccttattttcacaaa 280076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 5e-45; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 285 - 436
Target Start/End: Original strand, 31915489 - 31915641
Alignment:
Q  285 ataacttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc 383  Q
    |||||||||||||| ||| || |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||||| ||||||||     
T  31915489 ataacttttattcaatcagtagtattttagagagtttttctcaatttctggtggattccggaaccctattttcacaagtttgtcgcttgcaaacttgttt 31915588  T
Q  384 ttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtcaaac 436  Q
     |||||| |||| ||||| |||||||||||| |||||||||||||||||||||    
T  31915589 ctttcaacctaagtttagtgcttgctagcctgcgcttccgtactacgtcaaac 31915641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 287 - 420
Target Start/End: Original strand, 12944058 - 12944192
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttctt 385  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||||| |||| ||||||| |||| |||||| |||||    
T  12944058 aacttttattcattcaatattattttagagagttttctcaatttctggtggattccagaaccctatttttacaagtttgtcgtttgcaaacttgtttctt 12944157  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgctt 420  Q
    ||||||||| |||||||||||||||||||||||||    
T  12944158 ttcaatctagatttagcgcttgctagcctacgctt 12944192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 290 - 423
Target Start/End: Original strand, 50713658 - 50713792
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgt-tcttttc 388  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||| ||||||||||| |||||||| ||||||||||| |||||||    
T  50713658 ttttattcattcaataatatttttgagagttttctcaatttctggtggattccgaaaccctattttcacaagtttgtcgcctgcgaacttgtctcttttc 50713757  T
Q  389 aatctaaatttagcgcttgctagcctacgcttccg 423  Q
    ||||||  ||||||| ||| ||||||||| |||||    
T  50713758 aatctaggtttagcggttgttagcctacgtttccg 50713792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 286 - 423
Target Start/End: Original strand, 239628 - 239766
Alignment:
Q  286 taacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttct 384  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||| | ||||||| |||||| |||||||| ||||||| ||||||| |||||| ||||    
T  239628 taacttttattcatttaataatattttagagggttttcttaatttcagttggattccggaaccctattttcataaatttgacgcttgctaacttgtttct 239727  T
Q  385 tttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    ||| ||| ||| |||||| ||||||||||||||||||||    
T  239728 ttttaatataagtttagcccttgctagcctacgcttccg 239766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 287 - 423
Target Start/End: Original strand, 10925682 - 10925816
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttt 386  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||||||  |||||||||||| |||| |||||||||||| || ||||  |||    
T  10925682 aacttttattcattcaataatattttagagagttttttcaattttcggtggattccagaaccatatttttacaagtttgtcgcttgcaaaattgt--ttt 10925779  T
Q  387 tcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    ||||| ||  |||||||||||||||||| ||||||||    
T  10925780 tcaatttaggtttagcgcttgctagcctccgcttccg 10925816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 287 - 414
Target Start/End: Original strand, 10927136 - 10927262
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc-tt 385  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||   ||||||||| |||||||||||| ||||||||| ||    
T  10927136 aacttttattcattaaataatattttagagagttttctcaatttctggtggattccggaacc--cttttcacaagtttgtcgcttgcaaacttgttcttt 10927233  T
Q  386 ttcaatctaaatttagcgcttgctagcct 414  Q
    |||| ||||  ||||||| ||||||||||    
T  10927234 ttcagtctaggtttagcgtttgctagcct 10927262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 287 - 433
Target Start/End: Complemental strand, 28660894 - 28660747
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaa-tttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttct 384  Q
    |||||||||| ||||||||||||||||||||||||||| || |||||||||||||  |||||| ||||||||||| |||||||||||| |||||| ||||    
T  28660894 aacttttattaattcaataatattttagagagttttctaaattttctggtggatttcggaaccctattttcacaagtttgtcgcttgcaaacttgtttct 28660795  T
Q  385 tttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtca 433  Q
    | || |||||  ||||||| |||||| |||||||||||| |||||||||    
T  28660794 tatctatctaggtttagcgtttgctatcctacgcttccg-actacgtca 28660747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 268 - 423
Target Start/End: Original strand, 23987494 - 23987655
Alignment:
Q  268 agttgtagcttaa-aggcataacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaacc----atattttcacaaat 362  Q
    ||||||||| ||| || ||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||    |||||||||||| |    
T  23987494 agttgtagcgtaagagacataaattttattcaatcaataatattttagagagttatctcaatttctggtggattccggaaccttctatattttcacaagt 23987593  T
Q  363 ttgtcgcttgcgaacttgttc-ttttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    |||||| |||| || |||||| ||||| |||||  || ||||||||||| ||||||||||||    
T  23987594 ttgtcgtttgcaaagttgttctttttctatctaggttcagcgcttgctaccctacgcttccg 23987655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 286 - 417
Target Start/End: Original strand, 43681400 - 43681535
Alignment:
Q  286 taacttttattcattcaataatatttta-gaga-gttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg--t 381  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||||||||| ||||||||| |  |||||||||||||||||||||||| ||||||  |    
T  43681400 taacttttattcattcaataatattttaagagaagttttcttaatttctggtagattctggatctctattttcacaaatttgtcgcttgcaaacttgttt 43681499  T
Q  382 tcttttcaatctaaatttagcgcttgctagcctacg 417  Q
    | |||||||||||  |||||||||||||||| ||||    
T  43681500 ttttttcaatctaggtttagcgcttgctagcatacg 43681535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 287 - 423
Target Start/End: Original strand, 9030958 - 9031096
Alignment:
Q  287 aacttttattcattcaataatattttagag-agttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt-ct 384  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||  |||| |||||||| || ||| | |||||| ||||| || ||    
T  9030958 aacttttattcattcaataatattttagagaagttttctcaatttatggtggattctacaaccctattttcataagtttattgcttgcaaacttattcct 9031057  T
Q  385 tttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    ||||||| ||  |||||  ||||||||||||||||||||    
T  9031058 tttcaatataggtttagtacttgctagcctacgcttccg 9031096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 287 - 423
Target Start/End: Original strand, 8221430 - 8221567
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgt-tctt 385  Q
    |||||||||||||||||| |||||| | |||||||||||||||||||||||||||  ||||| |||||||| || ||||||| |||| ||||||| |||     
T  8221430 aacttttattcattcaatgatatttcaaagagttttctcaatttctggtggattccagaaccctattttcataagtttgtcgtttgcaaacttgtctcta 8221529  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    ||||||||   |||||| || |||||||||||| ||||    
T  8221530 ttcaatcttggtttagcactagctagcctacgcatccg 8221567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 422
Target Start/End: Original strand, 10928239 - 10928367
Alignment:
Q  295 ttcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgt-tcttttcaatct 393  Q
    ||||||||||| |||||||||||||||||||||||| | |||||||| | |||| ||||||||||| |||||| ||| | ||||| | |||||| |||||    
T  10928239 ttcattcaatagtattttagagagttttctcaatttatagtggattccgaaaccttattttcacaagtttgtcacttacaaacttatatctttttaatct 10928338  T
Q  394 aaatttagcgcttgctagcctacgcttcc 422  Q
    |  |||||| |||||||||||||||||||    
T  10928339 aggtttagcacttgctagcctacgcttcc 10928367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 388
Target Start/End: Complemental strand, 8967944 - 8967850
Alignment:
Q  294 attcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttttc 388  Q
    |||||||||||||||||| ||||||||||| |||||| ||||||||||||||||| |||||||| |  ||||||  |||| ||||||||||||||    
T  8967944 attcattcaataatatttcagagagttttcacaatttttggtggattctggaaccctattttcataggtttgtcatttgcaaacttgttcttttc 8967850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 288 - 382
Target Start/End: Complemental strand, 9195088 - 9194994
Alignment:
Q  288 acttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt 382  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||| | ||||| ||||  ||||  |||||||||||| ||||||||    
T  9195088 acttttattcattcaataatactttagagagttttttcaatttttggtggattattgaaccctattaacacatgtttgtcgcttgcaaacttgtt 9194994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 423
Target Start/End: Complemental strand, 28661214 - 28661078
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttctt 385  Q
    ||||||||| | ||||| ||||||||||||||||||||| |||| | ||||||| || |||| |||||| |||  ||| |||||||| |||||| |||||    
T  28661214 aacttttatccgttcaacaatattttagagagttttctc-attttttgtggattttgaaaccctatttttacaggtttttcgcttgcaaacttgtttctt 28661116  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
     ||||| ||  |||||| ||||||||||||||||||||    
T  28661115 atcaatttaggtttagcacttgctagcctacgcttccg 28661078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 435
Target Start/End: Original strand, 8931220 - 8931311
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtcaaa 435  Q
    |||| ||||||||||| ||| |||||||| |||||||| |||||||||||  ||||||||||||| | |||||||||||||||| |||||||    
T  8931220 aaccctattttcacaagtttatcgcttgcaaacttgtttttttcaatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcaaa 8931311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 394
Target Start/End: Complemental strand, 33152863 - 33152758
Alignment:
Q  292 ttattcattcaataatattttagagagttttctc--aatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttc 388  Q
    ||||||| |||||||||||||| |||||||| ||  |||||||||||||||| |||||| |||| ||  || |||||||||||| |||||| ||||||||    
T  33152863 ttattcaatcaataatattttatagagttttttcttaatttctggtggattccggaaccctattgtcgtaagtttgtcgcttgcaaacttgtttcttttc 33152764  T
Q  389 aatcta 394  Q
    ||||||    
T  33152763 aatcta 33152758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 50857533 - 50857442
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtcaaa 435  Q
    |||| ||||||||||| |||||||||| | ||||| |||||||| |||||  ||||||||||||| | |||||||||||||||| |||||||    
T  50857533 aaccctattttcacaagtttgtcgcttacaaacttattcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcaaa 50857442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 421
Target Start/End: Original strand, 31913359 - 31913453
Alignment:
Q  327 atttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcctacgcttc 421  Q
    ||||||||||||||  |||| | |||||| |||| |||||||||||| ||||||||  |||||| |||  ||||||||||||||||||| |||||    
T  31913359 atttctggtggatttcggaaacctatttttacaagtttgtcgcttgcaaacttgtttctttcaacctaggtttagcgcttgctagcctatgcttc 31913453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 36694270 - 36694153
Alignment:
Q  317 agttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcctac 416  Q
    ||||||||||||||||| ||||||| | |||| |||||||| |||||   || || |||| ||||   ||||||||||| ||||||||||||||| ||||    
T  36694270 agttttctcaatttctgatggattccgcaaccctattttcataaattcaccgtttacgaatttgtctctttcaatctaagtttagcgcttgctagtctac 36694171  T
Q  417 gcttccgtactacgtcaa 434  Q
      ||||||||| ||||||    
T  36694170 aattccgtactgcgtcaa 36694153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 36710371 - 36710254
Alignment:
Q  317 agttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcctac 416  Q
    ||||||||||||||||| ||||||| | |||| |||||||| |||||   || || |||| ||||   ||||||||||| ||||||||||||||| ||||    
T  36710371 agttttctcaatttctgatggattccgcaaccctattttcataaattcaccgtttacgaatttgtctctttcaatctaagtttagcgcttgctagtctac 36710272  T
Q  417 gcttccgtactacgtcaa 434  Q
      ||||||||| ||||||    
T  36710271 aattccgtactgcgtcaa 36710254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 426
Target Start/End: Complemental strand, 40058255 - 40058109
Alignment:
Q  279 aaaggcataacttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatatttt-cacaaatttgtcgcttgcgaa 376  Q
    ||||||||||||||||||||    |||||||||||  ||||||| |||||||  |||| ||||||| |||| |||||| || || |||||||||||| ||    
T  40058255 aaaggcataacttttattca----ataatattttatggagtttttctcaattgttggttgattctgaaaccctatttttcataagtttgtcgcttgcaaa 40058160  T
Q  377 cttgtt-cttttcaatctaaatttagcgcttgctagcctacgcttccgtac 426  Q
    ||| || |||||| || ||  ||||  ||||||||||||||||||||||||    
T  40058159 cttatttcttttctatttaggtttactgcttgctagcctacgcttccgtac 40058109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 9199362 - 9199312
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtgg 337  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  9199362 aacttttattctttcaataatattttagagagttttttcaatttcttgtgg 9199312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 302 - 423
Target Start/End: Original strand, 21903709 - 21903830
Alignment:
Q  302 aataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaactt-gttcttttcaatctaaattta 400  Q
    ||||||| |||||| |||||||||||||| | |||||||| | |||| ||||||||| || ||||||| | | |||||  ||||||||||||||| ||||    
T  21903709 aataatagtttagaaagttttctcaattttttgtggattccgaaaccctattttcac-aagttgtcgcctacaaacttatttcttttcaatctaagttta 21903807  T
Q  401 gcgcttgctagcctacgcttccg 423  Q
    ||||||  || ||||| ||||||    
T  21903808 gcgcttattaacctactcttccg 21903830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 350 - 407
Target Start/End: Complemental strand, 13444072 - 13444015
Alignment:
Q  350 tattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttg 407  Q
    ||||||||||| |||||||||||| |||||||||||||| |||||  ||||| |||||    
T  13444072 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttg 13444015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 297 - 421
Target Start/End: Complemental strand, 28659704 - 28659577
Alignment:
Q  297 cattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttt---tcaatct 393  Q
    |||||||||||| ||||||||||||| | ||||||| ||||||   |||| |  |||||||||| ||| || ||||| |||||||| |||   ||||| |    
T  28659704 cattcaataatactttagagagtttttttaatttctagtggatatcggaatccaattttcacaagtttatcccttgcaaacttgttttttttatcaatat 28659605  T
Q  394 aaatttagcgcttgctagcctacgcttc 421  Q
    |  ||||||  |||||||||||||||||    
T  28659604 aggtttagcatttgctagcctacgcttc 28659577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 423
Target Start/End: Original strand, 26981450 - 26981589
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctc----aatttctggtggattctggaaccatat--tttcacaaatttgtcgcttgcgaacttgttc 383  Q
    |||||||| | ||||| |||||||||||||||| |     |||||||| ||||||  | ||||||||  ||| |||| ||| |||||||| ||||||||     
T  26981450 ttttattcctccaatagtattttagagagtttttttttttaatttctgatggatttcgaaaccatatatttttacaagtttttcgcttgcaaacttgttt 26981549  T
Q  384 ttttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
     |||||||||| ||||||| || | || ||||||||||||    
T  26981550 ctttcaatctagatttagccctagataacctacgcttccg 26981589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 427
Target Start/End: Complemental strand, 13441673 - 13441612
Alignment:
Q  367 cgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcc-tacgcttccgtact 427  Q
    ||||||| || ||||||||||| |||||| |||||||||||||| || ||| ||||||||||    
T  13441673 cgcttgcaaaattgttcttttctatctaagtttagcgcttgctaaccatactcttccgtact 13441612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 1e-42; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 292 - 423
Target Start/End: Complemental strand, 11000968 - 11000836
Alignment:
Q  292 ttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttcaa 390  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||| | ||||||||||||||||||| ||||||||||    
T  11000968 ttattcattcaataatattttagagagttttcccaatttctggtggattcctgaaccctattttcactagtttgtcgcttgcgaacttgtttcttttcaa 11000869  T
Q  391 tctaaatttagcgcttgctagcctacgcttccg 423  Q
    ||||  |||||||||||||||||||| ||||||    
T  11000868 tctaggtttagcgcttgctagcctacacttccg 11000836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 287 - 428
Target Start/End: Original strand, 1365613 - 1365755
Alignment:
Q  287 aacttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttctt 385  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| ||||||||||| ||  |||||| | ||||||||| |    
T  1365613 aacttttattcattcaataatattttagagagtttttctcaatttttggtggattatggaaccctattttcacaagttcatcgcttacaaacttgttcct 1365712  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttccgtacta 428  Q
    |||||||||  |||||||||||||||||||  |||||||||||    
T  1365713 ttcaatctaggtttagcgcttgctagcctatccttccgtacta 1365755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 423
Target Start/End: Original strand, 1369747 - 1369884
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttctt 385  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| |||| ||| |||||||| |||||| |||||    
T  1369747 aacttttattaattcaataatattttatagagttttctcaatttctggtggattccggaaccctattttaacaagtttatcgcttgcaaacttgtttctt 1369846  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    |||||||||  |||| ||||||||||||| ||||||||    
T  1369847 ttcaatctaggtttaacgcttgctagcctccgcttccg 1369884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 290 - 421
Target Start/End: Original strand, 5934549 - 5934681
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttc 388  Q
    |||||||||||||||||||||||||||| ||||||||||||||  ||||||||| || | ||||||||||| |||||||||||| || ||| ||||||||    
T  5934549 ttttattcattcaataatattttagagaattttctcaatttctaatggattctgaaatcctattttcacaagtttgtcgcttgcaaatttgtttcttttc 5934648  T
Q  389 aatctaaatttagcgcttgctagcctacgcttc 421  Q
    ||||||  |||||||||||||||||||||||||    
T  5934649 aatctaggtttagcgcttgctagcctacgcttc 5934681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 285 - 434
Target Start/End: Complemental strand, 4888835 - 4888685
Alignment:
Q  285 ataacttttattcattcaataatattttagagagt-tttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc 383  Q
    |||||||||||||| |||||||||||||||||||| ||| ||||||||||||| |||| |||||  ||||||||||  |||||||||||| |||||||||    
T  4888835 ataacttttattcaatcaataatattttagagagtgtttttcaatttctggtgaattccggaactctattttcacaggtttgtcgcttgcaaacttgttc 4888736  T
Q  384 ttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtcaa 434  Q
    ||||| |||||  || ||||| |||||||||||||||||||| | ||||||    
T  4888735 ttttctatctaggttcagcgcatgctagcctacgcttccgtattgcgtcaa 4888685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 285 - 422
Target Start/End: Complemental strand, 3778863 - 3778720
Alignment:
Q  285 ataacttttattcattcaataatattttagagagttt------tctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaact 378  Q
    |||||||||||||| ||||||||||||||||||||||      |||||||||||||||||||| |||||| ||||||||||| ||| |||||||| ||||    
T  3778863 ataacttttattcaatcaataatattttagagagtttaatttttctcaatttctggtggattccggaaccctattttcacaagtttctcgcttgcaaact 3778764  T
Q  379 tgttcttttcaatctaaatttagcgcttgctagcctacgcttcc 422  Q
    ||||| |||||||||| |||||| |||||  |||||||||||||    
T  3778763 tgttcatttcaatctatatttagtgcttgtcagcctacgcttcc 3778720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 24840085 - 24840193
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttctt 385  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||| |||||| |||||    
T  24840085 aacttttatttattgaataatattttagagagttttctcaatttctggtggattccggaaccctattttcacaagtttgtcgcttgcaaacttgtttctt 24840184  T
Q  386 ttcaatcta 394  Q
    |||||||||    
T  24840185 ttcaatcta 24840193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 285 - 421
Target Start/End: Original strand, 30217753 - 30217890
Alignment:
Q  285 ataacttttattcattcaataatattttagagagtttt--ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt 382  Q
    |||||||||||||| |||||||||||||||||||| ||  ||||||| ||||||||||   ||||  ||||||||||| |||||||||||||||||||||    
T  30217753 ataacttttattcaatcaataatattttagagagtgttatctcaattactggtggatttcagaactctattttcacaagtttgtcgcttgcgaacttgtt 30217852  T
Q  383 cttttcaatctaaatttagcgcttgctagcctacgcttc 421  Q
    | ||||||||||  |||||||||||||||||||||||||    
T  30217853 c-tttcaatctaggtttagcgcttgctagcctacgcttc 30217890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 287 - 409
Target Start/End: Original strand, 11228923 - 11229046
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc-tt 385  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||  |||||||| ||| ||||||||| ||    
T  11228923 aacttttattcactcaataatattttagagagttttatcaatttctggtggattctggaacccttttttcacacgtttgtcgcctgcaaacttgttcttt 11229022  T
Q  386 ttcaatctaaatttagcgcttgct 409  Q
    |||||||||  |||||| ||||||    
T  11229023 ttcaatctaggtttagcacttgct 11229046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 287 - 423
Target Start/End: Complemental strand, 6451897 - 6451760
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttctt 385  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| || ||||||| | |||| ||||||||||  |||||||||||| |||||| ||| |    
T  6451897 aactttaattcattcaataatattttagagagttttttcaatttttgttggattccgaaaccttattttcacaggtttgtcgcttgcaaacttgtttcct 6451798  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    ||||||||| |||||||||||| |||| | ||||||||    
T  6451797 ttcaatctagatttagcgcttgatagctttcgcttccg 6451760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 287 - 423
Target Start/End: Original strand, 27142608 - 27142745
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttctt 385  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||| ||| |||||| ||||||||||| |||||||||||| |||||| |||||    
T  27142608 aacttttattaattgaataatatttcagagagttttctcaatttctggtggtttcaggaaccctattttcacaagtttgtcgcttgcaaacttgtttctt 27142707  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    |||||||||  |||| |  ||||||| |||||| ||||    
T  27142708 ttcaatctaggtttaaccattgctaggctacgcatccg 27142745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 287 - 421
Target Start/End: Complemental strand, 8916524 - 8916389
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc-tt 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||| ||||| ||| ||| |||| ||||||||| ||    
T  8916524 aacttttattcattcaataatattttagagagttttctcaatttctggtggattccagaactctatttccacaagtttatcgtttgcaaacttgttcatt 8916425  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttc 421  Q
    || ||||||  |||| ||||| ||||| ||||||||    
T  8916424 ttaaatctaggtttaacgcttactagcatacgcttc 8916389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 287 - 423
Target Start/End: Original strand, 1786625 - 1786763
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt-ctt 385  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||  |||||||||||| ||||||||  ||    
T  1786625 aacttttattcattaaataatattttagagagttttcgcaatttctgatggattctggaaccctattttcgcatgtttgtcgcttgcaaacttgttattt 1786724  T
Q  386 ttcaatctaaatttagcgcttgct-agcctacgcttccg 423  Q
    ||| |||||  |||||| |||||| | ||||||||||||    
T  1786725 ttctatctaggtttagcacttgctaatcctacgcttccg 1786763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 285 - 433
Target Start/End: Original strand, 2767870 - 2768015
Alignment:
Q  285 ataacttttattcattcaataatattttagagag-ttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc 383  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| | |||| || |||| |||||| ||||||||||||||| |||    
T  2767870 ataacttttattcaattaataatattttagagagtttttctcaatttctggtggattccgaaacccta-tttctcaaattcgtcgcttgcgaacttattc 2767968  T
Q  384 ttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtca 433  Q
     ||||||||||  ||||||| |   || |||||||||||||||| |||||    
T  2767969 ctttcaatctaggtttagcgtt---taacctacgcttccgtactgcgtca 2768015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 288 - 411
Target Start/End: Original strand, 35814814 - 35814937
Alignment:
Q  288 acttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttctttt 387  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||  ||||| |||||| |||| |||||||||||| || ||| |  |||    
T  35814814 acttttattcattcaataatattttagagagttttctcaatttatggtagattcaagaaccttatttttacaagtttgtcgcttgcaaagttggttcttt 35814913  T
Q  388 caatctaaatttagcgcttgctag 411  Q
    ||||||| |||||| | |||||||    
T  35814914 caatctagatttagtgtttgctag 35814937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 433
Target Start/End: Original strand, 1874493 - 1874627
Alignment:
Q  298 attcaataatattttagagagttttc-tcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttcaatctaa 395  Q
    |||||||||||||||||||||||||| ||||||   |||||||||| ||||| ||||||||||| ||||||| |||| |||||| |||||||||||| |     
T  1874493 attcaataatattttagagagttttcctcaatt---ggtggattcttgaaccttattttcacaagtttgtcgtttgcaaacttgtttcttttcaatcaag 1874589  T
Q  396 atttagcgcttgctagcctacgcttccgtactacgtca 433  Q
     ||||| | |||||| | ||||||||||||||||||||    
T  1874590 gtttagtgtttgctaacatacgcttccgtactacgtca 1874627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 410
Target Start/End: Complemental strand, 27309762 - 27309638
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttctt 385  Q
    |||||||||||||| |||||| |||| ||||||||||| ||||| |||  ||||   ||||| ||||||||||| |||||||||||| |||||| |||||    
T  27309762 aacttttattcattaaataattttttggagagttttcttaatttttggcagattagagaaccctattttcacaagtttgtcgcttgcaaacttgtttctt 27309663  T
Q  386 ttcaatctaaatttagcgcttgcta 410  Q
    |||||||||  ||||||||||||||    
T  27309662 ttcaatctaggtttagcgcttgcta 27309638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 369
Target Start/End: Complemental strand, 1690278 - 1690196
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgc 369  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||||| |||||||  ||||| ||||||||||||||||||||    
T  1690278 aacttttattcattaaatactattttagagaattttctcaatttctgatggattccagaaccctattttcacaaatttgtcgc 1690196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 394
Target Start/End: Complemental strand, 8063961 - 8063843
Alignment:
Q  268 agttgtagcttaa-aggcataacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgt 366  Q
    ||||||||||||| ||||||  |||||||| |||||||||||||||||||| |||||||||||||| |||||||       | | ||||||||||||| |    
T  8063961 agttgtagcttaagaggcat--cttttattaattcaataatattttagagaattttctcaatttctagtggatt-------cctgttttcacaaatttat 8063871  T
Q  367 cgcttgcgaacttgttcttttcaatcta 394  Q
    ||||||| ||||||||||||||||||||    
T  8063870 cgcttgcaaacttgttcttttcaatcta 8063843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 285 - 431
Target Start/End: Original strand, 1883435 - 1883576
Alignment:
Q  285 ataacttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-tt 382  Q
    ||||||||||||||   ||||||||||||||||||||| ||||||     || |||||||||||| ||||||||||| ||||||| |||| |||||| ||    
T  1883435 ataacttttattcaa--aataatattttagagagtttttctcaat-----gttgattctggaaccttattttcacaagtttgtcgtttgcaaacttgttt 1883527  T
Q  383 cttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgt 431  Q
    ||||||||||||  ||||| | |||||||| ||||||| ||||||||||    
T  1883528 cttttcaatctaggtttagtgtttgctagcatacgcttacgtactacgt 1883576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 11228661 - 11228758
Alignment:
Q  286 taacttttattcattcaataatattttagagagttttctcaa-tttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt 382  Q
    ||||||||| ||| ||| |||||||||||||||||||||||| ||||||||||||||| ||||| ||||| ||||| |||||||||| | ||||||||    
T  11228661 taacttttaatcaatcactaatattttagagagttttctcaattttctggtggattctagaaccctatttccacaagtttgtcgcttccaaacttgtt 11228758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 433
Target Start/End: Complemental strand, 13882775 - 13882686
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| |||||  ||||||||||||| | |||||||||||||||| |||||    
T  13882775 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 13882686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 350 - 433
Target Start/End: Complemental strand, 13886243 - 13886159
Alignment:
Q  350 tattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    ||||||||||| |||||||||||| |||||||||||||| |||||  ||||||||||||| | |||||||||||||||| |||||    
T  13886243 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 13886159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 434
Target Start/End: Complemental strand, 859245 - 859155
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtcaa 434  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| |||||  ||||||||||||| | |||||||||||||| | ||||||    
T  859245 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaatcctacgcttccgtattgcgtcaa 859155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 434
Target Start/End: Complemental strand, 1217249 - 1217159
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtcaa 434  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| |||||  ||||||||||||| | |||||||||||||| | ||||||    
T  1217249 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaatcctacgcttccgtattgcgtcaa 1217159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 18790311 - 18790234
Alignment:
Q  295 ttcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgc 373  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||  || | |||||||||| | |||||||||||    
T  18790311 ttcattcagtaatattttagagagttttctcaatttctggtggattctaaaatcctattttcacata-ttgtcgcttgc 18790234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 7803148 - 7803030
Alignment:
Q  317 agttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt-cttttcaatctaaatttagcgcttgctagccta 415  Q
    |||| |||||| || |||||||||| |||||| |||||||| || ||||| |||||| |||||||| |||||| | |||  |||| | ||||||| ||||    
T  7803148 agttgtctcaaattatggtggattccggaaccttattttcataagtttgttgcttgcaaacttgtttcttttcgacctaggtttaacccttgctaaccta 7803049  T
Q  416 cgcttccgtactacgtcaa 434  Q
    |||||||||||| ||||||    
T  7803048 cgcttccgtactgcgtcaa 7803030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 423
Target Start/End: Complemental strand, 4133393 - 4133284
Alignment:
Q  315 agagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttctt-ttcaatctaaatttagcgcttgctagcc 413  Q
    |||||||||||||||||| | |||||   ||||  ||||||||||| |||||||||||  || |||||| | |||||||||| ||||||  |||||||||    
T  4133393 agagttttctcaatttctaggggatttcagaactctattttcacaagtttgtcgcttgaaaatttgttcatcttcaatctaagtttagcatttgctagcc 4133294  T
Q  414 tacgcttccg 423  Q
    ||||||||||    
T  4133293 tacgcttccg 4133284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 4956009 - 4955956
Alignment:
Q  289 cttttattcattcaataatattttagagagttttctcaatttctggtggattct 342  Q
    |||||||||||||||||||||||||| |||||||||||||||||  ||||||||    
T  4956009 cttttattcattcaataatattttagggagttttctcaatttctaatggattct 4955956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 423
Target Start/End: Complemental strand, 19404257 - 19404118
Alignment:
Q  287 aacttttattcattcaataa-tattttagagagttttctcaatttctggtggattctggaaccatattttcacaaattt-gtcgcttgcgaactt-gttc 383  Q
    |||||||||||||||||||| |||||||||||||||| ||||||| | | ||||||| |||||   ||||| ||| ||| || | ||| ||||||  |||    
T  19404257 aacttttattcattcaataaatattttagagagttttttcaattttttgcggattctagaacccctttttcgcaagtttcgttgtttgtgaacttatttc 19404158  T
Q  384 ttttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    |||| ||| ||  ||||||  |||||||||||||||||||    
T  19404157 tttttaatttaggtttagcatttgctagcctacgcttccg 19404118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 325
Target Start/End: Complemental strand, 4133436 - 4133398
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctc 325  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  4133436 aacttatattcattcaataatattttagagagttttctc 4133398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 324
Target Start/End: Complemental strand, 8915313 - 8915279
Alignment:
Q  290 ttttattcattcaataatattttagagagttttct 324  Q
    |||||||||||||||||||||||||||||||||||    
T  8915313 ttttattcattcaataatattttagagagttttct 8915279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 431
Target Start/End: Complemental strand, 1220529 - 1220442
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgt 431  Q
    |||| ||||||||||| ||||||| |||| ||||||||| |||| || ||  ||||||| ||||| | |||||||||| |||||||||    
T  1220529 aaccctattttcacaagtttgtcgtttgcaaacttgttcatttctatgtaggtttagcgtttgctaaccctacgcttctgtactacgt 1220442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 391
Target Start/End: Complemental strand, 1753695 - 1753640
Alignment:
Q  337 gattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttcaat 391  Q
    |||||||||||  ||||||||||| |||||||||||| |||||| |||||||||||    
T  1753695 gattctggaactctattttcacaagtttgtcgcttgcaaacttgtttcttttcaat 1753640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 333
Target Start/End: Complemental strand, 1785541 - 1785499
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctg 333  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  1785541 ttttattcattcaataatatttta-agaattttctcaatttctg 1785499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 11001159 - 11001101
Alignment:
Q  90 atcagaatgagaatttggggtctgagttcttcaaag-tggaggagattgatgtaggaggg 148  Q
    |||| ||||||||||||||||| |||||||||| || ||||||||| |||||||||||||    
T  11001159 atcacaatgagaatttggggtc-gagttcttcagaggtggaggagactgatgtaggaggg 11001101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 368 - 425
Target Start/End: Original strand, 29175780 - 29175838
Alignment:
Q  368 gcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgta 425  Q
    |||||| ||||| ||||||||||||||  ||||||||||||| | ||||||||||||||    
T  29175780 gcttgcaaactttttcttttcaatctaggtttagcgcttgctaaccctacgcttccgta 29175838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 8915503 - 8915448
Alignment:
Q  93 agaatgagaatttggggtctgagttcttcaaag-tggaggagattgatgtaggaggg 148  Q
    |||||||||||| ||||||| ||||||||| || ||||||||| |||||||||||||    
T  8915503 agaatgagaattcggggtct-agttcttcagagatggaggagactgatgtaggaggg 8915448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 5e-39; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 285 - 434
Target Start/End: Complemental strand, 2472838 - 2472688
Alignment:
Q  285 ataacttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc 383  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||| |||| |||||||      
T  2472838 ataacttttattcaatcaataatattttagtgagtttttctcaatttctggtggattccggaaccctattttcacaagtttgtcggttgcaaacttgtct 2472739  T
Q  384 ttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtcaa 434  Q
     ||||||| ||  |||||||||||||||||||||||| |||||| ||||||    
T  2472738 ctttcaatttaggtttagcgcttgctagcctacgctttcgtactgcgtcaa 2472688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 293 - 422
Target Start/End: Complemental strand, 2107994 - 2107866
Alignment:
Q  293 tattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatc 392  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||| |||||| |||||| |||| ||||| |||||| ||| ||||  |||||||     
T  2107994 tattcattcaatagtattttagagagttttctcaatctctggtggattc-ggaaccttatttttacaagtttgttgcttgcaaacctgtttctttcaatt 2107896  T
Q  393 taaatttagcgcttgctagcctacgcttcc 422  Q
    || ||||| |||||||||||||| ||||||    
T  2107895 tagatttaacgcttgctagcctaagcttcc 2107866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 285 - 434
Target Start/End: Complemental strand, 365742 - 365592
Alignment:
Q  285 ataacttttattcattcaataatattttagagagttttctcaattt-ctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc 383  Q
    |||||||||||||| ||||||||||||  |||| ||||||| |||| |||||||||||  ||||| ||||||||||| ||||||||||| ||| |||||     
T  365742 ataacttttattcaatcaataatatttctgagacttttctctattttctggtggattcaagaaccctattttcacaagtttgtcgcttgggaatttgtta 365643  T
Q  384 ttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtcaa 434  Q
    |||||  | ||  ||||||| ||||||||||||||||||||| | ||||||    
T  365642 ttttctttttaggtttagcgtttgctagcctacgcttccgtaatgcgtcaa 365592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 1320198 - 1320124
Alignment:
Q  285 ataacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcaca 359  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  1320198 ataacttttattcattcaataatattttagagaattttctctatttctggtggattctggaaccctattttcaca 1320124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 287 - 433
Target Start/End: Complemental strand, 8536520 - 8536369
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-----t 381  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| |||| | |||||||| || | |||| ||||| | ||||     |    
T  8536520 aacttttattcattagataatattttagagagtttcctcaatttctggtggattccggaatcctattttcaaaagtctgtcccttgcaaccttgattttt 8536421  T
Q  382 tcttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtca 433  Q
    | ||||| |||||  |||||| ||||||||||||| ||||||||||| ||||    
T  8536420 ttttttctatctaggtttagcacttgctagcctacacttccgtactatgtca 8536369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 43304049 - 43303958
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcc-tacgcttccgtactacgtcaaa 435  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| |||||  |||||||||||||| || |||||||||||||| |||||||    
T  43304049 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccttacgcttccgtactgcgtcaaa 43303958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 289 - 372
Target Start/End: Original strand, 41152493 - 41152577
Alignment:
Q  289 cttttattcattcaataatatttt-agagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttg 372  Q
    ||||||||||||| |||||||||| | |||||||||||||||| | |||||||||| |||  |||||||||||||||||||||||    
T  41152493 cttttattcattcgataatatttttaaagagttttctcaattttttgtggattctgaaacactattttcacaaatttgtcgcttg 41152577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 433
Target Start/End: Complemental strand, 43306761 - 43306672
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    |||| ||||||||||| ||||| |||||| |||||||||||||| |||||  ||||||||||||| | |||||||||||||||| |||||    
T  43306761 aaccctattttcacaagtttgttgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 43306672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 433
Target Start/End: Original strand, 5128909 - 5128998
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| |||||  |||||||| |||| | |||||||||| ||||| |||||    
T  5128909 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcctgctaaccctacgcttctgtactgcgtca 5128998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 410
Target Start/End: Complemental strand, 45168434 - 45168343
Alignment:
Q  322 tctcaatttctggtggattctggaaccatat---tttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgcta 410  Q
    ||||||||||| ||||||||||||||| |||   |||||||| |||||||||||| ||||||||  ||||||||||  |||||| |||||||    
T  45168434 tctcaatttcttgtggattctggaaccctatatttttcacaagtttgtcgcttgcaaacttgtttatttcaatctaggtttagcacttgcta 45168343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 410
Target Start/End: Complemental strand, 5324778 - 5324655
Alignment:
Q  285 ataacttttattcattcaataatattttagagagttttctcaa-tttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaact-tgtt 382  Q
    |||||||  |||||||||||||||||||  ||||||||||||| ||||||||||||||   | |  ||||||||||||||| |||||||| |||| | ||    
T  5324778 ataacttaaattcattcaataatattttcaagagttttctcaattttctggtggattc--catc--tattttcacaaatttatcgcttgcaaactctttt 5324683  T
Q  383 cttttcaatctaaatttagcgcttgcta 410  Q
    |||||||||| |  |||| |||||||||    
T  5324682 cttttcaatcaaggtttaacgcttgcta 5324655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 423
Target Start/End: Original strand, 52708798 - 52708923
Alignment:
Q  289 cttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc-tttt 387  Q
    ||||| || |||||||||||||||||||||||||||||||           ||||||||| || |||||||| ||| |||||||| || |||||| ||||    
T  52708798 cttttttttattcaataatattttagagagttttctcaat----------atctggaaccctactttcacaagtttatcgcttgcaaatttgttcttttt 52708887  T
Q  388 caatctaaatttagcgcttgctagcctacgcttccg 423  Q
    | |||||  ||||||||||| || ||||||||||||    
T  52708888 ctatctaggtttagcgcttgttaacctacgcttccg 52708923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 345 - 433
Target Start/End: Complemental strand, 3063826 - 3063737
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    |||| ||||||||||| |||||||||||| ||||  |||||||| |||||  |||| |||||||| | ||||||||| |||||| |||||    
T  3063826 aaccctattttcacaagtttgtcgcttgcaaactctttcttttctatctaggtttaacgcttgctaaccctacgctttcgtactgcgtca 3063737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 3068940 - 3068875
Alignment:
Q  369 cttgcgaacttgttcttttcaatctaaatttagcgcttgctagcc-tacgcttccgtactacgtca 433  Q
    ||||| |||||||||||||| |||||  |||||||||||||| || |||||||||||||| |||||    
T  3068940 cttgcaaacttgttcttttctatctaggtttagcgcttgctaaccatacgcttccgtactgcgtca 3068875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 317
Target Start/End: Complemental strand, 20400762 - 20400732
Alignment:
Q  287 aacttttattcattcaataatattttagaga 317  Q
    |||||||||||||||||||||||||||||||    
T  20400762 aacttttattcattcaataatattttagaga 20400732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 423
Target Start/End: Original strand, 33175832 - 33175914
Alignment:
Q  342 tggaaccatattttcacaaatttgtcgcttgcgaacttgt-tcttttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    ||||||| |||||||| || ||||||  |||| ||||||| |||||||||| ||  |||| || |||||||||||||||||||    
T  33175832 tggaaccctattttcataagtttgtcctttgcaaacttgtctcttttcaatataggtttatcgtttgctagcctacgcttccg 33175914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 287 - 421
Target Start/End: Original strand, 9644 - 9780
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaa--atttgtcgcttgcgaacttgttct 384  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||| |||||||||||   || ||||||||  ||||||||||    
T  9644 aacttttattcattcaataatatttcagagagttttctcaatttctggtggatttcggaaccctattttcacaagtgttagtcgcttggaaacttgttct 9743  T
Q  385 tttcaatctaaatttagcgcttgctagcctacgcttc 421  Q
    ||||||||||  |||| ||||||||||| ||||||||    
T  9744 tttcaatctaggtttaccgcttgctagcatacgcttc 9780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 4e-36; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 287 - 423
Target Start/End: Original strand, 22440799 - 22440936
Alignment:
Q  287 aacttttattcattcaataatattttagagag-ttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttctt 385  Q
    |||||| |||||||||||||||||||||| || |||||| ||||||| ||||||||||||||| |||| ||| || |||||||||||||||| |||||||    
T  22440799 aactttgattcattcaataatattttagataggttttcttaatttctagtggattctggaaccctattatcataagtttgtcgcttgcgaacatgttctt 22440898  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    ||| |||||  |||||| ||||||||||||||||||||    
T  22440899 ttctatctaggtttagcacttgctagcctacgcttccg 22440936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 287 - 415
Target Start/End: Original strand, 492508 - 492638
Alignment:
Q  287 aacttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt-ct 384  Q
    |||||||||||||| |||||||||| |||||||||| || |||||||||| ||||| | |||| ||| ||||||| |||||||||||| |||||||| ||    
T  492508 aacttttattcatttaataatatttcagagagtttttcttaatttctggttgattccgaaaccctatcttcacaagtttgtcgcttgcaaacttgtttct 492607  T
Q  385 tttcaatctaaatttagcgcttgctagccta 415  Q
    |||||||||||||||||||||||||||||||    
T  492608 tttcaatctaaatttagcgcttgctagccta 492638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 423
Target Start/End: Original strand, 26140298 - 26140422
Alignment:
Q  300 tcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttct-tttcaatctaaatt 398  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| || |||||||||||| | |||||| | |||||||||| |||    
T  26140298 tcaataatattttagagagttttctcaatttttggtggattcttgaaccctattttcataagtttgtcgcttgcaatcttgttttctttcaatctagatt 26140397  T
Q  399 tagcgcttgctagcctacgcttccg 423  Q
    ||||| |||||| |||| |||||||    
T  26140398 tagcgtttgctaacctatgcttccg 26140422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 285 - 423
Target Start/End: Original strand, 18252356 - 18252495
Alignment:
Q  285 ataacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttct 384  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||| | ||||| ||||||||||  |||||||||||| ||||||||||    
T  18252356 ataacttctattcattcaataatattttaaagagttttctcaatttctagtggattatagaaccctattttcacaggtttgtcgcttgcaaacttgttct 18252455  T
Q  385 -tttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
     |||| |||||  |||| ||||||  ||||||| ||||||    
T  18252456 atttctatctaggtttaacgcttgtaagcctacacttccg 18252495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 295 - 423
Target Start/End: Complemental strand, 8456520 - 8456389
Alignment:
Q  295 ttcattcaataatattttagagagttttctcaatttc----tggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt-cttttca 389  Q
    |||| |||||||||||||||||  |||||||||||||    |||||||||  |||| | |||||| |||| || |||||||||||||||||| |||||||    
T  8456520 ttcaatcaataatattttagag--ttttctcaatttcgatctggtggatttcggaatcctatttttacaagttcgtcgcttgcgaacttgtttcttttca 8456423  T
Q  390 atctaaatttagcgcttgctagcctacgcttccg 423  Q
    |||||  |||||||||||||| ||||||||||||    
T  8456422 atctaggtttagcgcttgctaccctacgcttccg 8456389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 19497441 - 19497351
Alignment:
Q  298 attcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttctttt 387  Q
    |||||||||||||||||||| |||| |||||||| || ||||||  |||||| ||||||||||| |||||||||||| |||||||||||||    
T  19497441 attcaataatattttagagattttttctcaatttttgatggatttcggaaccctattttcacaagtttgtcgcttgcaaacttgttctttt 19497351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 432
Target Start/End: Complemental strand, 21849054 - 21848966
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtc 432  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| |||||  ||| ||||||||| | |||||||||||||||| ||||    
T  21849054 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttggcgcttgctaaccctacgcttccgtactgcgtc 21848966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 40778875 - 40778784
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtcaaa 435  Q
    |||| |||||| |||| |||||||||||| |||||||||||||| |||||  ||||||||||| | | ||| |||||||||||| |||||||    
T  40778875 aaccctatttttacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgttaaccctgcgcttccgtactgcgtcaaa 40778784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 3e-34; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 289 - 433
Target Start/End: Complemental strand, 27822264 - 27822118
Alignment:
Q  289 cttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgtt-cttt 386  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||  |||||| | ||||||||| |||||||||||  |||||||| ||||    
T  27822264 cttttattcaatcaataatattttagagagtttttctcaatttctggtggatttcggaaccctgttttcacaagtttgtcgcttgaaaacttgttccttt 27822165  T
Q  387 tcaatctaaatttagcgcttgctagcctacgcttccgtactacgtca 433  Q
    || || ||  ||||||| ||||||||||||||||||||||| |||||    
T  27822164 tctatttaggtttagcgtttgctagcctacgcttccgtactgcgtca 27822118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 290 - 413
Target Start/End: Original strand, 1127199 - 1127323
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttc 388  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||| |||| | |||  |||||||||||||||||||||||| |||||| |||||||     
T  1127199 ttttattcattcaatattattttagagagttttctcaatttttggtgtattccgaaacactattttcacaaatttgtcgcttgcaaacttgtttcttttt 1127298  T
Q  389 aatctaaatttagcgcttgctagcc 413  Q
    ||||||  ||||||||| |||||||    
T  1127299 aatctaggtttagcgctcgctagcc 1127323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 268 - 427
Target Start/End: Complemental strand, 18728011 - 18727849
Alignment:
Q  268 agttgtagcttaaaggcataacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccata-ttttcacaaatttgt 366  Q
    ||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  |||||| || |||||||  |||| |    
T  18728011 agttgtagcctaaagggataacttttattcaatcaattatattttagagagttttctcaatttctggtggatttcggaaccttatttttcaccgatttat 18727912  T
Q  367 cgcttgcgaacttgtt--cttttcaatctaaatttagcgcttgctagcctacgcttccgtact 427  Q
     |||||| ||||| ||   ||||| |||||| ||||||| |||||||||||| ||| ||||||    
T  18727911 tgcttgcaaacttatttctttttctatctaagtttagcgtttgctagcctacactttcgtact 18727849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 287 - 420
Target Start/End: Original strand, 32361310 - 32361443
Alignment:
Q  287 aacttttattcattcaataatattttagagag-ttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttctt 385  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| || ||||| |||||| |||||| |||| ||| |||||||| ||| | |||||    
T  32361310 aacttttattcattcaataatattttagagagtttttctcaatttctcgtagattccggaaccttatttttacaattttatcgcttgcaaacat-ttctt 32361408  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgctt 420  Q
    ||||||||| ||||| |||||||||  ||||||||    
T  32361409 ttcaatctagatttaacgcttgctaatctacgctt 32361443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 302 - 435
Target Start/End: Complemental strand, 33615636 - 33615502
Alignment:
Q  302 aataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttc-ttttcaatctaaattta 400  Q
    ||||||||||||||||||||| ||||||| ||||| |||||| |||| ||||||||||| |||||||||||| ||||||||| ||||| |||||  |||     
T  33615636 aataatattttagagagttttttcaatttatggtgaattctgaaaccctattttcacaagtttgtcgcttgcaaacttgttctttttctatctaggtttt 33615537  T
Q  401 gcgcttgctagcctacgcttccgtactacgtcaaa 435  Q
    ||||||| ||||||||| ||||||| | |||||||    
T  33615536 gcgcttgttagcctacgtttccgtaatgcgtcaaa 33615502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 287 - 418
Target Start/End: Original strand, 11658873 - 11659005
Alignment:
Q  287 aacttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttctt 385  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||   |||  ||||||||||| ||| |||||||| || ||||||||    
T  11658873 aacttttattcaatcaataatattttagagagtttttctcaatttttggtggattccaaaactctattttcacaagtttatcgcttgcaaatttgttctt 11658972  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgc 418  Q
    |||||||||  ||||| |||||||| |||||||    
T  11658973 ttcaatctaggtttagtgcttgctaacctacgc 11659005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 290 - 423
Target Start/End: Original strand, 12882067 - 12882202
Alignment:
Q  290 ttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgt-tctttt 387  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||| ||||||||||   ||||||| |||| |    
T  12882067 ttttattcattcaataatattttagagagtttttctcaatttctggtggattccgaaaccctattttcacaagtttgtcgctttaaaacttgtctcttct 12882166  T
Q  388 caatctaaatttagcgcttgctagcctacgcttccg 423  Q
    |||||||  || || | ||||||| |||||||||||    
T  12882167 caatctaggttcagtgtttgctagtctacgcttccg 12882202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 307 - 421
Target Start/End: Complemental strand, 8049092 - 8048978
Alignment:
Q  307 tattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgctt 406  Q
    ||||||||||||||||||||||||||||||||| | ||| || ||||||||||| |||||| ||||| ||||| ||||||| ||||||   |||  ||||    
T  8049092 tattttagagagttttctcaatttctggtggatcccggagccttattttcacaagtttgtcacttgcaaactttttctttttaatctaggattaatgctt 8048993  T
Q  407 gctagcctacgcttc 421  Q
    |||||||||||||||    
T  8048992 gctagcctacgcttc 8048978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 285 - 387
Target Start/End: Complemental strand, 24443220 - 24443118
Alignment:
Q  285 ataacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttct 384  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||||||| |||||| | || |||||||||||| | | ||||||    
T  24443220 ataacttttattcattcaataatattgcagagagttttcttaatttctggttgattctggaaccctatttttataagtttgtcgcttgcaagcctgttct 24443121  T
Q  385 ttt 387  Q
    |||    
T  24443120 ttt 24443118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 433
Target Start/End: Original strand, 3536034 - 3536123
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| |||||  ||||||||||||| | |||||||||||||||| |||||    
T  3536034 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 3536123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 423
Target Start/End: Complemental strand, 12778547 - 12778417
Alignment:
Q  287 aacttttattcattcaataatattttagagagtttt--ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttct 384  Q
    |||||||||||||||||||| |||||| ||||||||  ||||||||||||| |||||  ||||| |||||||||||  || |||||||| |||           
T  12778547 aacttttattcattcaataa-attttatagagttttttctcaatttctggtagattccagaaccttattttcacaagattatcgcttgcaaac------- 12778456  T
Q  385 tttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  12778455 tttcaatctagatttagcgcttactagcctacgcttccg 12778417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 18727115 - 18727186
Alignment:
Q  352 ttttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcctacgcttccg 423  Q
    ||||||||| ||||||||||||||||||||  |||||||||||  ||||||| |||||||||||||||||||    
T  18727115 ttttcacaagtttgtcgcttgcgaacttgtgtttttcaatctaggtttagcgtttgctagcctacgcttccg 18727186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 34373924 - 34373865
Alignment:
Q  296 tcattcaataatattttagagagttttctcaatttctggtggattctggaaccatatttt 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  34373924 tcattcaataatattttagagagttttctcaatttctggtggattccataaccatatttt 34373865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 433
Target Start/End: Original strand, 3542245 - 3542334
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    |||| ||||||||||| |||||||||| | |||||||||||||| |||||  ||||||||||||| | |||||||||||||||| |||||    
T  3542245 aaccctattttcacaagtttgtcgcttacaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 3542334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 411
Target Start/End: Complemental strand, 33215282 - 33215185
Alignment:
Q  315 agagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttcaatctaaatttagcgcttgctag 411  Q
    |||||||| |||||||||||||||||  |||||   |||||||||  |||||||||||| |||||| ||||||| |||||| |||||||| |||||||    
T  33215282 agagttttttcaatttctggtggattacggaacttgattttcacaggtttgtcgcttgcaaacttgtttctttttaatctagatttagcgtttgctag 33215185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 14216818 - 14216882
Alignment:
Q  268 agttgtagcttaaaggcataacttttattcattcaataatattttagagagttttctcaatttct 332  Q
    ||||||||| |||  | |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  14216818 agttgtagcctaagaggataacttttatttattcaataatatttcagagagttttctcaatttct 14216882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 433
Target Start/End: Original strand, 30049921 - 30050005
Alignment:
Q  350 tattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtactacgtca 433  Q
    ||||||||||| |||||||||||| |||||||||||||| || ||  ||||||||||||| | ||| |||||||||||| |||||    
T  30049921 tattttcacaagtttgtcgcttgcaaacttgttcttttctatataggtttagcgcttgctaacccttcgcttccgtactgcgtca 30050005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 29340895 - 29340812
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtact 427  Q
    |||| ||||||||||| |||||||||||| |||||||| ||||| |||||  |||||||| |||| | ||||||||||||||||    
T  29340895 aaccctattttcacaagtttgtcgcttgcaaacttgtttttttctatctaggtttagcgcctgctaaccctacgcttccgtact 29340812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 417
Target Start/End: Original strand, 22873762 - 22873887
Alignment:
Q  295 ttcattcaataatattttagagag-ttttctcaatttct-ggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgt-tcttttcaat 391  Q
    |||||| |||| ||||| |||||| |||||||||||| | ||||||||| |||||| |  |||||||| |||||||| ||| ||||||| ||||||||||    
T  22873762 ttcattgaatattatttcagagagcttttctcaattttttggtggattccggaacctttatttcacaagtttgtcgcatgcaaacttgtctcttttcaat 22873861  T
Q  392 ctaaatttagcgcttgctagcctacg 417  Q
     ||  |||| | ||||||||||||||    
T  22873862 ttaggtttaacacttgctagcctacg 22873887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 415
Target Start/End: Original strand, 14238419 - 14238507
Alignment:
Q  328 tttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttcaatctaaatttagcgcttgctagccta 415  Q
    |||||| |||| || |||||| ||||||||||| |||||||||||| |||||| ||||||||||| ||  ||||| | |||||||||||    
T  14238419 tttctgatggactccggaaccttattttcacaagtttgtcgcttgcaaacttgtttcttttcaatttatgtttagtgtttgctagccta 14238507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 406
Target Start/End: Original strand, 30052208 - 30052264
Alignment:
Q  350 tattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgctt 406  Q
    ||||||||||| |||||||||||| |||||||||||||| |||||  ||||||||||    
T  30052208 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgctt 30052264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 427
Target Start/End: Original strand, 22910754 - 22910885
Alignment:
Q  298 attcaataatattttagagag-ttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgt-tcttttcaatctaa 395  Q
    |||||||| ||||| |||||| |||||||||||| |||||| |||  ||||| |  ||||| || |||||||  ||| ||||||| | |||||||||||     
T  22910754 attcaatattatttcagagagcttttctcaatttttggtggtttccagaacctttatttcataagtttgtcgaatgcaaacttgtcttttttcaatctag 22910853  T
Q  396 atttagcgcttgctagcctacgcttccgtact 427  Q
     ||||  ||||||||||||||||||| |||||    
T  22910854 gtttaaagcttgctagcctacgcttctgtact 22910885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 352 - 432
Target Start/End: Complemental strand, 18718279 - 18718201
Alignment:
Q  352 ttttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcctacgcttccgtactacgtc 432  Q
    ||||||||| ||||||  ||||||| ||||  |||||||||||  |||||||||||||||||||| |||| ||||| ||||    
T  18718279 ttttcacaagtttgtc--ttgcgaatttgtctttttcaatctaggtttagcgcttgctagcctacacttctgtactgcgtc 18718201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 24664209 - 24664298
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaactt 379  Q
    ||||||||||| |||||||||| |||||||||||| ||| | |||||||||  | |||| |||||| |||  ||| |||||||| |||||    
T  24664209 ttttattcatttaataatatttcagagagttttcttaatctttggtggatttcgaaaccttatttttacatttttatcgcttgcaaactt 24664298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 394
Target Start/End: Complemental strand, 33693969 - 33693866
Alignment:
Q  290 ttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttttc 388  Q
    |||||||||||||||| ||||| | |||||||| |||| |||  ||||||||  |||| |||||||||||  ||||| |||||| || ||| ||||||||    
T  33693969 ttttattcattcaatattatttcaaagagttttatcaagttc-cgtggattc-cgaactatattttcacaggtttgttgcttgcaaatttgtttcttttc 33693872  T
Q  389 aatcta 394  Q
    ||||||    
T  33693871 aatcta 33693866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 427
Target Start/End: Original strand, 22889215 - 22889343
Alignment:
Q  301 caataatattttagagag-ttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgt-tcttttcaatctaaatt 398  Q
    ||||| ||||| |||||| |||||||||||| | |||| |||  ||||| |  ||||| || |||||||  ||| ||||||| | |||||||||||  ||    
T  22889215 caatattatttcagagagcttttctcaattttttgtggtttccagaacctttatttcataagtttgtcgaatgcaaacttgtcttttttcaatctaggtt 22889314  T
Q  399 tagcgcttgctagcctacgcttccgtact 427  Q
    ||  ||||||||||||||||||| |||||    
T  22889315 taaagcttgctagcctacgcttctgtact 22889343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 70; Significance: 3e-31; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 287 - 420
Target Start/End: Original strand, 37654 - 37786
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttt 386  Q
    |||| ||||||||| ||| ||||||||||||||||||  |||||||||| |||| ||||||| |||||||| || |||||||||||| ||||||||||||    
T  37654 aactgttattcatttaattatattttagagagttttcctaatttctggtcgattttggaacc-tattttcataagtttgtcgcttgcaaacttgttcttt 37752  T
Q  387 tcaatctaaatttagcgcttgctagcctacgctt 420  Q
    ||||||||  |||||||||| ||||| |||||||    
T  37753 tcaatctaggtttagcgctttctagcttacgctt 37786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 286 - 421
Target Start/End: Original strand, 49263 - 49398
Alignment:
Q  286 taacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttctt 385  Q
    ||||||||||||||| ||| ||||||||||||||||||   |||| ||||||||| ||||||| |||||||| || |||||||||||| |||||||||||    
T  49263 taacttttattcatttaattatattttagagagttttccttatttatggtggattttggaaccctattttcataagtttgtcgcttgcaaacttgttctt 49362  T
Q  386 ttcaatctaaatttagcgcttgctagcctacgcttc 421  Q
     ||||||||  || | ||||| ||||| ||||||||    
T  49363 ctcaatctaggttcaacgctttctagcttacgcttc 49398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 427
Target Start/End: Original strand, 10608 - 10738
Alignment:
Q  299 ttcaataatattttagagag-ttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgt-tcttttcaatctaaa 396  Q
    ||||||| ||||| |||||| |||||||||||| | |||| |||  ||||| |  ||||| || |||||||  ||| ||||||| | |||||||||||      
T  10608 ttcaatattatttcagagagcttttctcaattttttgtggtttccagaacctttatttcataagtttgtcgaatgcaaacttgtcttttttcaatctagg 10707  T
Q  397 tttagcgcttgctagcctacgcttccgtact 427  Q
    ||||  ||||||||||||||||||| |||||    
T  10708 tttaaagcttgctagcctacgcttctgtact 10738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 289 - 434
Target Start/End: Original strand, 145677 - 145823
Alignment:
Q  289 cttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg-ttcttt 386  Q
    ||||||||||||||||||||||||||| | |||| |||||||| ||||||||||| ||||| |||||| ||||  ||||||||||| |||||| || |||    
T  145677 cttttattcattcaataatattttagataatttttctcaatttttggtggattctagaaccctatttttacaagcttgtcgcttgcaaacttgatttttt 145776  T
Q  387 tcaatctaaatttagcgcttgctagcctacgcttccgtactacgtcaa 434  Q
    ||||||||  ||||||| |||||||| ||| |||||| ||||||||||    
T  145777 tcaatctaggtttagcgattgctagcttacacttccg-actacgtcaa 145823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 285 - 380
Target Start/End: Complemental strand, 144066 - 143974
Alignment:
Q  285 ataacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttg 380  Q
    |||||||||||| |||||||||||||||||||||||||||||||   |||||||||| |||| | ||||||||||||||| |||||||| ||||||    
T  144066 ataacttttatttattcaataatattttagagagttttctcaat---tggtggattccggaaacctattttcacaaatttttcgcttgcaaacttg 143974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 63; Significance: 4e-27; HSPs: 4)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 1599 - 1725
Alignment:
Q  287 aacttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttctt 385  Q
    |||||||||||||| |||||||||||||| |||||| ||||| |||||||||||||  |||||||||||| |||| ||||||| |||| ||||||||  |    
T  1599 aacttttattcattgaataatattttagatagtttttctcaaattctggtggattccagaaccatattttgacaagtttgtcgtttgcaaacttgtttct 1698  T
Q  386 ttcaatctaaatttagcgcttgctagc 412  Q
    |||||||||  |||| |||||||||||    
T  1699 ttcaatctaggtttaacgcttgctagc 1725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 287 - 417
Target Start/End: Original strand, 15989 - 16119
Alignment:
Q  287 aacttttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttt 386  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||  ||   |||||||| |  |||||| ||||| ||||||||||||    
T  15989 aacttttattcattcaataatattttatagagttttctaaatttctggtggattctataatactattttcagatgtttgtcacttgcaaacttgttcttt 16088  T
Q  387 tcaatctaaatttagcgcttgctagcctacg 417  Q
    || |||||  |||||| |||| |||||||||    
T  16089 tctatctaggtttagcacttgttagcctacg 16119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 421
Target Start/End: Original strand, 14821 - 14923
Alignment:
Q  319 ttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcctacgc 418  Q
    |||| ||||||| |||||||||| |||  | ||||||||||| ||| |||||||| ||||| ||  |||||||| |  ||||||||||||||||||||||    
T  14821 ttttttcaatttttggtggattccggattcctattttcacaagtttttcgcttgccaacttatttatttcaatcaaggtttagcgcttgctagcctacgc 14920  T
Q  419 ttc 421  Q
    |||    
T  14921 ttc 14923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 14442 - 14390
Alignment:
Q  290 ttttattcattcaataatattttagagag-ttttctcaatttctggtggattc 341  Q
    ||||||| ||| |||||||||||||| || |||||||||||| ||||||||||    
T  14442 ttttatttattgaataatattttagaaagtttttctcaatttttggtggattc 14390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 291 - 406
Target Start/End: Complemental strand, 15207 - 15092
Alignment:
Q  291 tttattcattcaataatattttagagagttttctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaa 390  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||| |||| || |||||||  ||||||||   ||||||    
T  15207 tttattcattcaataatattttagaggattttctcaatttctggtggattctagaaccctatttttacaagttcgtcgcttaggaacttgtctctttcaa 15108  T
Q  391 tctaaatttagcgctt 406  Q
    ||||  ||||||||||    
T  15107 tctagttttagcgctt 15092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 290 - 412
Target Start/End: Original strand, 17584 - 17707
Alignment:
Q  290 ttttattcattcaataatattttagagagtttt-ctcaatttctggtggattctggaaccatattttcacaaatttgtcgcttgcgaacttgttcttttc 388  Q
    ||||||||||| |||||||||||||| |||||| ||||| ||| |||||||||  |||||||||||| |||| ||||||| |||| ||||||||  ||||    
T  17584 ttttattcattgaataatattttagatagtttttctcaaattcaggtggattccagaaccatattttgacaagtttgtcgtttgcaaacttgtttctttc 17683  T
Q  389 aatctaaatttagcgcttgctagc 412  Q
    ||||||  |||| |||||||||||    
T  17684 aatctaggtttaacgcttgctagc 17707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 322 - 433
Target Start/End: Complemental strand, 46846 - 46733
Alignment:
Q  322 tctcaatttctggtggattctggaaccata-ttttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgct 419  Q
    ||||||||| |||||||||| |||||| || |||| | |  |||||||||||| |||||||||||||| |||||  ||||||||||||| | ||||||||    
T  46846 tctcaatttttggtggattccggaaccttaattttgataggtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctcaccctacgct 46747  T
Q  420 tccgtactacgtca 433  Q
    |||||||| |||||    
T  46746 tccgtactgcgtca 46733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 427
Target Start/End: Complemental strand, 45351 - 45268
Alignment:
Q  345 aaccatattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgct-agcctacgcttccgtact 427  Q
    |||| |||||||| || |||||||||||| ||||||||||||   |||||| ||||||||||||| | ||||||||||||||||    
T  45351 aaccttattttcataagtttgtcgcttgcaaacttgttctttcttatctaattttagcgcttgctaaccctacgcttccgtact 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0531 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 421
Target Start/End: Complemental strand, 11672 - 11601
Alignment:
Q  350 tattttcacaaatttgtcgcttgcgaacttgttcttttcaatctaaatttagcgcttgctagcctacgcttc 421  Q
    ||||||||||| |||||| ||||| ||||| ||||||| ||||||   |||  |||||||||||||||||||    
T  11672 tattttcacaagtttgtcacttgcaaactttttctttttaatctaggattaatgcttgctagcctacgcttc 11601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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