View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5659_2D_high_24 (Length: 214)
Name: NF5659_2D_high_24
Description: NF5659_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5659_2D_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 36 - 196
Target Start/End: Original strand, 20975550 - 20975710
Alignment:
| Q |
36 |
catcatcacacaatcttcttcatctttacaaatgacaacgaagtgtcggtggtgatgatcatgatcacgatcatgtatatatcttttgtaatgaatatga |
135 |
Q |
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| T |
20975550 |
catcatcacacaatcttcttcgtctttacaaatgacaacgaagtgtcggtggtgatgatcatgatcacgatcatgtatatatcttttgtaatgaatatga |
20975649 |
T |
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| Q |
136 |
ccaccaatacatgatcatgaccatgaccattagcaccaacatttcctgatcattggtaaag |
196 |
Q |
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| T |
20975650 |
ccaccaatacatgatcatgaccatgaccattagcaccaacatttcctgatcattggtaaag |
20975710 |
T |
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