View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5659_high_8 (Length: 251)

Name: NF5659_high_8
Description: NF5659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5659_high_8
NF5659_high_8
[»] chr5 (23 HSPs)
chr5 (1-241)||(27916187-27916427)
chr5 (1-98)||(36769058-36769155)
chr5 (1-92)||(8456953-8457044)
chr5 (1-92)||(10115207-10115298)
chr5 (1-90)||(39862479-39862568)
chr5 (1-77)||(614397-614473)
chr5 (1-92)||(11856342-11856433)
chr5 (1-92)||(38397645-38397736)
chr5 (1-92)||(6257400-6257491)
chr5 (1-92)||(37169023-37169114)
chr5 (1-79)||(42119669-42119747)
chr5 (1-77)||(10081192-10081268)
chr5 (1-68)||(15475408-15475475)
chr5 (1-88)||(23218532-23218619)
chr5 (33-84)||(29491412-29491463)
chr5 (53-91)||(3341111-3341149)
chr5 (5-83)||(29790218-29790296)
chr5 (1-83)||(9737980-9738064)
chr5 (1-89)||(33271263-33271351)
chr5 (32-90)||(6174824-6174882)
chr5 (54-92)||(10052490-10052528)
chr5 (19-92)||(16618560-16618633)
chr5 (22-75)||(33188330-33188383)
[»] chr4 (24 HSPs)
chr4 (1-94)||(47084059-47084152)
chr4 (1-88)||(10094387-10094474)
chr4 (1-92)||(17888540-17888631)
chr4 (1-90)||(46474041-46474130)
chr4 (1-85)||(12792228-12792312)
chr4 (1-92)||(1535818-1535909)
chr4 (1-92)||(25954797-25954888)
chr4 (1-92)||(37801254-37801345)
chr4 (1-92)||(49284404-49284495)
chr4 (32-126)||(19124694-19124788)
chr4 (1-77)||(9742538-9742614)
chr4 (1-92)||(31377437-31377527)
chr4 (1-92)||(34241040-34241131)
chr4 (1-92)||(50328843-50328934)
chr4 (1-89)||(35322697-35322785)
chr4 (1-92)||(36012175-36012266)
chr4 (1-45)||(5780791-5780835)
chr4 (54-94)||(36851375-36851415)
chr4 (1-81)||(54090227-54090307)
chr4 (13-92)||(11054515-11054593)
chr4 (1-88)||(16338207-16338294)
chr4 (1-92)||(20818614-20818705)
chr4 (20-92)||(35019002-35019073)
chr4 (1-45)||(52632565-52632609)
[»] chr3 (24 HSPs)
chr3 (1-92)||(10839370-10839461)
chr3 (1-98)||(43347320-43347417)
chr3 (1-91)||(1781809-1781899)
chr3 (5-96)||(3178754-3178845)
chr3 (1-92)||(8950494-8950585)
chr3 (19-94)||(27642725-27642800)
chr3 (1-92)||(19649362-19649453)
chr3 (1-92)||(21853244-21853335)
chr3 (1-92)||(44994958-44995050)
chr3 (1-92)||(13856146-13856237)
chr3 (1-92)||(20382566-20382656)
chr3 (1-84)||(22845360-22845443)
chr3 (1-92)||(36539679-36539770)
chr3 (18-77)||(50663198-50663257)
chr3 (32-89)||(6280352-6280409)
chr3 (10-82)||(39352250-39352321)
chr3 (1-77)||(54546951-54547027)
chr3 (1-77)||(8926813-8926889)
chr3 (1-81)||(40845918-40845998)
chr3 (50-85)||(791900-791935)
chr3 (11-82)||(19644327-19644398)
chr3 (1-92)||(32352894-32352985)
chr3 (20-79)||(36825965-36826024)
chr3 (19-77)||(33103808-33103866)
[»] chr2 (15 HSPs)
chr2 (1-89)||(43139794-43139882)
chr2 (1-98)||(40277272-40277369)
chr2 (1-83)||(14539703-14539785)
chr2 (1-91)||(6318448-6318539)
chr2 (1-92)||(14942034-14942125)
chr2 (1-132)||(41674657-41674787)
chr2 (1-92)||(42769748-42769839)
chr2 (7-84)||(28321701-28321778)
chr2 (1-82)||(19181595-19181676)
chr2 (1-92)||(29846489-29846580)
chr2 (10-90)||(14186430-14186510)
chr2 (1-80)||(33009720-33009799)
chr2 (54-92)||(3597880-3597918)
chr2 (32-77)||(40780134-40780179)
chr2 (1-77)||(2888088-2888164)
[»] chr7 (15 HSPs)
chr7 (3-92)||(10334227-10334316)
chr7 (1-92)||(17303104-17303195)
chr7 (1-92)||(44164733-44164824)
chr7 (1-92)||(10576720-10576811)
chr7 (1-92)||(24320429-24320520)
chr7 (1-92)||(33057647-33057738)
chr7 (1-92)||(34707163-34707254)
chr7 (1-86)||(19334556-19334641)
chr7 (1-77)||(15017820-15017896)
chr7 (1-92)||(34259565-34259656)
chr7 (53-92)||(41853210-41853249)
chr7 (27-77)||(43342483-43342533)
chr7 (1-89)||(32876523-32876611)
chr7 (19-92)||(29238133-29238206)
chr7 (1-89)||(29555932-29556020)
[»] chr1 (17 HSPs)
chr1 (21-92)||(10907638-10907709)
chr1 (1-92)||(38859898-38859989)
chr1 (1-91)||(30745391-30745481)
chr1 (1-91)||(30766842-30766932)
chr1 (1-92)||(48392396-48392487)
chr1 (10-84)||(42456628-42456702)
chr1 (1-92)||(47022749-47022840)
chr1 (1-92)||(49902515-49902606)
chr1 (20-98)||(14796942-14797020)
chr1 (20-98)||(14805816-14805894)
chr1 (19-89)||(37189705-37189774)
chr1 (32-92)||(10156006-10156066)
chr1 (32-92)||(42517284-42517344)
chr1 (1-88)||(26835385-26835472)
chr1 (5-75)||(13131947-13132017)
chr1 (1-82)||(3346833-3346914)
chr1 (55-92)||(26511624-26511661)
[»] chr6 (11 HSPs)
chr6 (1-91)||(13103109-13103199)
chr6 (9-91)||(24497565-24497647)
chr6 (1-90)||(27863746-27863836)
chr6 (10-126)||(28750606-28750722)
chr6 (1-92)||(13627587-13627678)
chr6 (1-91)||(1727924-1728014)
chr6 (1-92)||(9231844-9231935)
chr6 (1-82)||(14309798-14309879)
chr6 (1-92)||(24694641-24694732)
chr6 (53-98)||(34088789-34088834)
chr6 (1-134)||(34103732-34103865)
[»] chr8 (14 HSPs)
chr8 (1-92)||(35806841-35806932)
chr8 (10-88)||(16591369-16591447)
chr8 (3-92)||(16523155-16523244)
chr8 (10-92)||(10112103-10112185)
chr8 (4-86)||(43282847-43282929)
chr8 (11-92)||(33934359-33934440)
chr8 (1-92)||(22324643-22324734)
chr8 (14-92)||(2824172-2824250)
chr8 (10-90)||(16818965-16819045)
chr8 (1-92)||(21525405-21525496)
chr8 (1-92)||(26021443-26021534)
chr8 (1-92)||(42072475-42072566)
chr8 (1-82)||(42013919-42014000)
chr8 (53-88)||(19334882-19334917)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1-77)||(20836-20912)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-88)||(54566-54653)
[»] scaffold0620 (1 HSPs)
scaffold0620 (53-89)||(2240-2276)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-77)||(34457-34533)


Alignment Details
Target: chr5 (Bit Score: 161; Significance: 6e-86; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 27916187 - 27916427
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcccagacaatt 100  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||  |||| |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  27916187 aaatctaatgaaattgctcaatttataggagtttatataagaaattcagaggaatttacataagaaattgcaaaaaatttaggccgaagcccagacaatt 27916286  T
Q  101 tcctagactggccgggcattagaaccacccctaaattaatgaatataataagatgtcacgaaccttgttacaatattcactaatcattaattgaacatgt 200  Q
    ||  || || ||||||| || |||||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||    
T  27916287 tctcaggcttgccgggcctttgaaccggccctagattaatgaatataataaggtgtcacgaaccttgttacaatattcactaatcattaactgcacatgt 27916386  T
Q  201 ttaactttgttaaaaaatagtaattgaattatgtacctttg 241  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27916387 ttaactttgttaaaaaatagtaattgaattatgtacctttg 27916427  T

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Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 36769155 - 36769058
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcccagacaa 98  Q
    |||||||| ||||||||  |||| |||  | ||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| || |||||    
T  36769155 aaatctaaagaaattgcctaattcatagaggtttatataagaaattcagaggaatttacataagaaattgcaaaaaatttgggccggagtccggacaa 36769058  T

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Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8457044 - 8456953
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||||| |||||||| ||||||||| ||  |||||||||||||  | ||  ||||||||||||||||| |||||||||||||||||||||    
T  8457044 aaatctaaagaaattgcccaatttatagggggttatataagaaattcatagggatttacataagaaattgaaaaaaatttgggccggagccc 8456953  T

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Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10115207 - 10115298
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||||| |||||||   |||||||  || ||||||||||||||| |||| ||||||||||| ||||||||||||| ||||||||||||||    
T  10115207 aaatctaaagaaattgtctaatttattggggtttatataagaaatccagaggaatttacataaaaaattgcaaaaaaattgggccggagccc 10115298  T

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Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 39862568 - 39862479
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagc 90  Q
    |||||||| |||||||| ||||||||| || ||||||||||||||  | || |||||||| |||||||||||||||| |||| |||||||    
T  39862568 aaatctaaagaaattgcccaatttataggggtttatataagaaattcataggaatttacacaagaaattgcaaaaaaattggcccggagc 39862479  T

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Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 614473 - 614397
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaa 77  Q
    |||||||| ||||||||  |||||||| |||||||||||| ||||  |||| |||||||||||||||||||||||||    
T  614473 aaatctaaagaaattgccaaatttatagggatttatataaaaaattcagaggaatttacataagaaattgcaaaaaa 614397  T

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Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11856342 - 11856433
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||||| |||||||| |||||||||  ||||||||||||||||  ||||  |||||||||||||||| || |||| |||||||| |||||    
T  11856342 aaatctaaagaaattgcccaatttatagtgatttatataagaaattcagagcgatttacataagaaattacagaaaacttgggccgaagccc 11856433  T

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Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 38397645 - 38397736
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  38397645 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 38397736  T

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Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 6257491 - 6257400
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||| ||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  6257491 aaatgtaaagaaattgcccaatttataggggtttgtataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 6257400  T

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Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 37169114 - 37169023
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| || |||||||||||||||||| |||||||||    
T  37169114 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaaaaaattgcaaaaaatttggcccggagccc 37169023  T

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Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 42119669 - 42119747
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatt 79  Q
    |||||||| |||||||  |||||||||  | ||||||||||||||  |||| ||||||||||||||||| |||||||||    
T  42119669 aaatctaaagaaattgtccaatttatagaggtttatataagaaattcagaggaatttacataagaaattacaaaaaatt 42119747  T

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Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10081192 - 10081268
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaa 77  Q
    |||||||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||||||||||||| ||||||    
T  10081192 aaatctaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacataagaaattgaaaaaaa 10081268  T

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Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15475475 - 15475408
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaat 68  Q
    |||| ||| ||||||  ||||||||||  ||||||||||| |||| ||||||||||||||||||||||    
T  15475475 aaatttaaagaaatttttcaatttatatagatttatataaaaaattaagagaaatttacataagaaat 15475408  T

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Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 23218532 - 23218619
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccgga 88  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| ||||||||||||||| ||||| |||||    
T  23218532 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaactttggcccgga 23218619  T

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Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 29491463 - 29491412
Alignment:
Q  33 ttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggc 84  Q
    |||||||||||||  | |||||||||||||||||||||||||| ||||||||    
T  29491463 ttatataagaaattcatagaaatttacataagaaattgcaaaagatttgggc 29491412  T

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Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 3341149 - 3341111
Alignment:
Q  53 aatttacataagaaattgcaaaaaatttgggccggagcc 91  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  3341149 aatttacataagaaattgcaaaaaatttgggccagagcc 3341111  T

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Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 29790296 - 29790218
Alignment:
Q  5 ctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttggg 83  Q
    |||| |||||||| |||||||||| | ||||||||||||||  | |  |||||||||||||||||| ||||| ||||||    
T  29790296 ctaaagaaattgcccaatttataaaggtttatataagaaattcataagaatttacataagaaattgtaaaaattttggg 29790218  T

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Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9738064 - 9737980
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaa-tca-agagaaatttacataagaaattgcaaaaaatttggg 83  Q
    |||||||| |||||||  ||||||||| |||||||||||||||| ||| || ||  |||||||||||||||| |||||| |||||    
T  9738064 aaatctaaagaaattgtccaatttatagggatttatataagaaattcatagggatttttacataagaaattgaaaaaaaattggg 9737980  T

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Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 33271351 - 33271263
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggag 89  Q
    |||| ||| |||||||  |||||||||  | ||||||||||||||  |  | |||||||||||||||||| |||||| |||||||||||    
T  33271351 aaatataaagaaattgtccaatttatagaggtttatataagaaattcaacggaatttacataagaaattgtaaaaaaattgggccggag 33271263  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 6174824 - 6174882
Alignment:
Q  32 tttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagc 90  Q
    ||||||||||||||  |||  ||||||| ||||||||| |||||||||||||| |||||    
T  6174824 tttatataagaaattcagaagaatttacgtaagaaattacaaaaaatttgggctggagc 6174882  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 10052528 - 10052490
Alignment:
Q  54 atttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  10052528 atttacataagaaattgtaaaaaaattgggccggagccc 10052490  T

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Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 16618633 - 16618560
Alignment:
Q  19 caatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    ||||||||| |  ||||||||||||||  | ||  ||||||| ||||||||| ||||||||||| |||||||||    
T  16618633 caatttataggagtttatataagaaattcatagggatttacacaagaaattgtaaaaaatttggcccggagccc 16618560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 33188383 - 33188330
Alignment:
Q  22 tttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaa 75  Q
    |||||| || ||||||||||||||  |||  |||||||||||||||||||||||    
T  33188383 tttataggggtttatataagaaatttagatgaatttacataagaaattgcaaaa 33188330  T

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Target: chr4 (Bit Score: 62; Significance: 7e-27; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 47084059 - 47084152
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcccag 94  Q
    |||||||| |||||| | ||||||||| || ||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  47084059 aaatctaaagaaattacccaatttataggggtttatataagaaattcagagaaatttacataagaaattgcaaaaaatttaggccggagcccag 47084152  T

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Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10094474 - 10094387
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccgga 88  Q
    ||||||||  ||||| | ||||||||| || ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||    
T  10094474 aaatctaaataaattacccaatttataggggtttatataagaaattcagagaaatttacataagaaattacaaaaaatttgggccgga 10094387  T

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Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 17888631 - 17888540
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||||| |||||||| ||||||||| ||  |||||||||||||  | || |||||||||||||||||| |||||||||||||||||||||    
T  17888631 aaatctaaagaaattgcccaatttatagggggttatataagaaattcataggaatttacataagaaattgaaaaaaatttgggccggagccc 17888540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 46474041 - 46474130
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagc 90  Q
    |||||||| |||||||  ||||||||| || ||||||||| ||||  | || ||||||||||||||||||||||||||||||||||||||    
T  46474041 aaatctaaagaaattgtacaatttatatgggtttatataaaaaattcacaggaatttacataagaaattgcaaaaaatttgggccggagc 46474130  T

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Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12792312 - 12792228
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggcc 85  Q
    |||||||| | |||||| ||||||||| || ||||||||||||||  |||||||||||||||||||||| ||||||| |||||||    
T  12792312 aaatctaaagtaattgcccaatttataggggtttatataagaaattcagagaaatttacataagaaattacaaaaaaattgggcc 12792228  T

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Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 1535818 - 1535909
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  1535818 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 1535909  T

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Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 25954797 - 25954888
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| |  ||||||||||||||  | || |||||||| ||||||||||||||||||||| |||||||||    
T  25954797 aaatgtaaagaaattgcccaatttataggagtttatataagaaattcataggaatttacacaagaaattgcaaaaaatttggcccggagccc 25954888  T

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Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 37801345 - 37801254
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| ||| |||| ||||||||| |||||||||||| ||||  | ||||||||||| ||||||||||||||||||| | |||||||||    
T  37801345 aaatgtaaagaatttgcccaatttatagggatttatataaaaaattcatagaaatttacacaagaaattgcaaaaaatttagcccggagccc 37801254  T

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Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 49284404 - 49284495
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  49284404 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 49284495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 19124788 - 19124694
Alignment:
Q  32 tttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcccagacaatttcctagactggccgggcattagaacc 126  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||| || |||||||||||   ||| | |||||||| ||||| | ||||||||    
T  19124788 tttatataagaaattcagaggaatttacataagaaattgcaaaaaaattaggccggagcccgcgcaactgcctagactcgccggaccttagaacc 19124694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 9742614 - 9742538
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaa 77  Q
    |||||||| |||||||| ||||||||| || || |||||||||||  |||| |||||||||||||||||| ||||||    
T  9742614 aaatctaaagaaattgcccaatttataggggttaatataagaaattcagaggaatttacataagaaattgtaaaaaa 9742538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31377437 - 31377527
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||||| |||||||| |||||||||  |  |||||||||||||  | ||  ||||||||||||||||| |||||||||||||||||||||    
T  31377437 aaatctaaagaaattgcccaatttatagagggttatataagaaattcatagggatttacataagaaattg-aaaaaatttgggccggagccc 31377527  T

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Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34241040 - 34241131
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  || |||| ||||||||||||||||||||| |||||||||    
T  34241040 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatctacacaagaaattgcaaaaaatttggcccggagccc 34241131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 50328843 - 50328934
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||  |||||||||  | |||||||||||||| ||||| |||||||| |||||||||||||||| ||| ||| ||||||    
T  50328843 aaatttaaagaaattgtccaatttatagaggtttatataagaaattaagaggaatttacaaaagaaattgcaaaaaaattgagccagagccc 50328934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 35322785 - 35322697
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggag 89  Q
    |||||||| ||||||| ||||||||||  | ||||||||||| ||  ||||||||||| |||| ||||| ||||||| ||||| |||||    
T  35322785 aaatctaaagaaattgttcaatttatagaggtttatataagagattcagagaaatttatataaaaaattacaaaaaaattgggtcggag 35322697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 36012266 - 36012175
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| || |||||||||||||||||| ||| |||||    
T  36012266 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaaaaaattgcaaaaaatttggcccgaagccc 36012175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5780835 - 5780791
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaat 45  Q
    |||| ||| |||||||| |||||||||||||||||||||||||||    
T  5780835 aaatttaaagaaattgcccaatttataaggatttatataagaaat 5780791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 36851415 - 36851375
Alignment:
Q  54 atttacataagaaattgcaaaaaatttgggccggagcccag 94  Q
    ||||||| ||||||||||||||||||||| |||||||||||    
T  36851415 atttacacaagaaattgcaaaaaatttggcccggagcccag 36851375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 54090227 - 54090307
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttg 81  Q
    ||||||||  ||||||| |||||||||||  ||||||||| ||||  ||||  ||||||| ||| ||||||||||||||||    
T  54090227 aaatctaaaaaaattgcccaatttataagagtttatataataaattcagagggatttacaaaaggaattgcaaaaaatttg 54090307  T

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Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 11054515 - 11054593
Alignment:
Q  13 attgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    ||||| |||||||||  | ||||||||||||||  | ||  |||||||||||||||||||||||| |||| |||||||||    
T  11054515 attgcccaatttatagaggtttatataagaaattcatagggatttacataagaaattgcaaaaaa-ttggaccggagccc 11054593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16338294 - 16338207
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccgga 88  Q
    |||| ||| |||||||  ||||||||| |||||||||||| ||||  | || |||||||| || ||||||||||||| |||| |||||    
T  16338294 aaatgtaaagaaattgtccaatttatagggatttatataaaaaattcataggaatttacacaaaaaattgcaaaaaaattggcccgga 16338207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 20818614 - 20818705
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    ||||||||  ||||||  ||||||||| |  ||||||||||||||  | ||  ||||||| |||||||||||||||||||||| | ||||||    
T  20818614 aaatctaaaaaaattgaccaatttataggagtttatataagaaattcatagggatttacaaaagaaattgcaaaaaatttgggtcagagccc 20818705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 35019002 - 35019073
Alignment:
Q  20 aatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    ||||||||||| ||||||||||||||  | ||  ||||||| ||||||||| ||||||||||| || ||||||    
T  35019002 aatttataagggtttatataagaaattcatag-gatttacacaagaaattgtaaaaaatttggcccagagccc 35019073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 52632565 - 52632609
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaat 45  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||||    
T  52632565 aaatgtaaagaaattgcccaatttatagggatttatataagaaat 52632609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 10839461 - 10839370
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||||| |||||||| |||||||||  | ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  10839461 aaatctaaagaaattgcccaatttatagaggtttatataagaaattcagagaaatttacataagaaattgcaaaaaatttgggtcggagccc 10839370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 43347417 - 43347320
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcccagacaa 98  Q
    |||||||| |||||||| |||||| || || ||||||||||||||  |||| ||||||||||||||||||||||||||||||| |||||||| |||||    
T  43347417 aaatctaaagaaattgcccaatttgtaggggtttatataagaaattcagaggaatttacataagaaattgcaaaaaatttgggtcggagcccggacaa 43347320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 1781809 - 1781899
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcc 91  Q
    |||||||| |||||||| ||||||||  || ||||||||||||||  ||||  |||||||||||||||||||||||||||||||| |||||    
T  1781809 aaatctaaagaaattgcccaatttattggggtttatataagaaattcagagggatttacataagaaattgcaaaaaatttgggccagagcc 1781899  T

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Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 3178754 - 3178845
Alignment:
Q  5 ctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcccagac 96  Q
    |||| |||||||| |||||||||  ||||||||||||||||  | ||  ||||||| ||||||||| |||||||||||||||||||||||||    
T  3178754 ctaaagaaattgcccaatttatagagatttatataagaaattcatagggatttacacaagaaattgaaaaaaatttgggccggagcccagac 3178845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8950585 - 8950494
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||||  | || |||||||| ||||||||||||||||||||| || ||||||    
T  8950585 aaatgtaaagaaattgcccaatttatagggatttatataagaaattcataggaatttacacaagaaattgcaaaaaatttggcccagagccc 8950494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 27642725 - 27642800
Alignment:
Q  19 caatttataaggatttatataagaaat-caagagaaatttacataagaaattgcaaaaaatttgggccggagcccag 94  Q
    ||||||||||||||||||||||||||| ||| || | ||||||||||||||||||||||||||| || |||||||||    
T  27642725 caatttataaggatttatataagaaattcaaaagga-tttacataagaaattgcaaaaaatttgagcaggagcccag 27642800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19649453 - 19649362
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||||| |||||||  |||||||||||| ||||||||||||||  | ||  |||||||||||||||| ||||||| ||| ||||||||||    
T  19649453 aaatctaaagaaattgtccaatttataagggtttatataagaaattcatagcgatttacataagaaattacaaaaaagttgtgccggagccc 19649362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21853244 - 21853335
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  21853244 aaatgtaaagaaattgcccaatttatagggttttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 21853335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 44995050 - 44994958
Alignment:
Q  1 aaatctaatgaaattgctcaatttataagga-tttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||||||  ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  44995050 aaatgtaaagaaattgcccaatttataaggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 44994958  T

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Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13856146 - 13856237
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||  ||||||||| |||||||||||||||||  | ||  ||||||| ||||||||| ||||||||||| |||||||||    
T  13856146 aaatgtaaagaaattgtccaatttatagggatttatataagaaattcatagggatttacacaagaaattgaaaaaaatttggcccggagccc 13856237  T

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Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 20382566 - 20382656
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||||| |||||| | ||||||||| || ||||||||||||||  | ||  ||||||||||||||||  |||||||||||||||||||||    
T  20382566 aaatctaaagaaatttcccaatttataggggtttatataagaaattcatagggatttacataagaaatt-aaaaaaatttgggccggagccc 20382656  T

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Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22845443 - 22845360
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggc 84  Q
    |||||||| |||||||   |||||||| || ||||||||||||||  ||   ||||||||||||||||||||||||||||||||    
T  22845443 aaatctaaagaaattgtcaaatttataggggtttatataagaaatttaggtgaatttacataagaaattgcaaaaaatttgggc 22845360  T

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Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 36539679 - 36539770
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| ||  |||||||||||||  | ||  ||||||||||||||||||| ||||||| |||||||||||    
T  36539679 aaatttaaagaaattgcccaatttataggggattatataagaaatttatagggatttacataagaaattgcataaaatttaggccggagccc 36539770  T

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Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 50663198 - 50663257
Alignment:
Q  18 tcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaa 77  Q
    ||||||||||||| ||||||||||||||  |||| ||| |||||||||||||||||||||    
T  50663198 tcaatttataagggtttatataagaaatttagaggaatctacataagaaattgcaaaaaa 50663257  T

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Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 6280409 - 6280352
Alignment:
Q  32 tttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggag 89  Q
    ||||||||||||||  || |||||||||||||||||||||| ||||||| ||||||||    
T  6280409 tttatataagaaattcagggaaatttacataagaaattgcacaaaatttaggccggag 6280352  T

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Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 39352250 - 39352321
Alignment:
Q  10 gaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgg 82  Q
    ||||||| | ||||||||  ||||||||||||||||  ||||||||||| ||||||||||||||||| |||||    
T  39352250 gaaattgttaaatttatagagatttatataagaaatttagagaaattta-ataagaaattgcaaaaattttgg 39352321  T

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Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 54546951 - 54547027
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaa 77  Q
    |||||||| |||||||  ||||||||| || ||||||||||||||  | || ||||||| |||||||||||||||||    
T  54546951 aaatctaaagaaattgtccaatttataggggtttatataagaaattcaaaggaatttacgtaagaaattgcaaaaaa 54547027  T

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Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 8926813 - 8926889
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaa 77  Q
    |||||||  ||||||||  |||||||| || ||||||| ||||||  |||| |||||||||| ||||||||||||||    
T  8926813 aaatctacagaaattgccaaatttataggggtttatatcagaaattcagaggaatttacatatgaaattgcaaaaaa 8926889  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40845998 - 40845918
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttg 81  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| || |||||||||||||||||    
T  40845998 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaaaaaattgcaaaaaatttg 40845918  T

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Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 85
Target Start/End: Original strand, 791900 - 791935
Alignment:
Q  50 agaaatttacataagaaattgcaaaaaatttgggcc 85  Q
    |||||||||||||||||||||||||||| |||||||    
T  791900 agaaatttacataagaaattgcaaaaaaattgggcc 791935  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 19644398 - 19644327
Alignment:
Q  11 aaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgg 82  Q
    |||||| ||||||||||| ||||||||||| ||||  | || ||||||||||| ||||| ||||||| ||||    
T  19644398 aaattgttcaatttataaagatttatataaaaaattcatagcaatttacataaaaaattacaaaaaaattgg 19644327  T

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Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 32352894 - 32352985
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| ||||||||  |||||||| || ||||||||||||||  | ||  ||||| | |||||||||||||||| |||| |||||||||    
T  32352894 aaatgtaaagaaattgcctaatttataggggtttatataagaaattcatagggatttatacaagaaattgcaaaaaaattggcccggagccc 32352985  T

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Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 36826024 - 36825965
Alignment:
Q  20 aatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatt 79  Q
    ||||||||||| ||||||| ||||||  | |||  |||||||||||||||||||||||||    
T  36826024 aatttataagggtttatatgagaaatttaaagaggtttacataagaaattgcaaaaaatt 36825965  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 33103808 - 33103866
Alignment:
Q  19 caatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaa 77  Q
    ||||||||| ||| |||||||||||||  |  | |||||||||||||||||||||||||    
T  33103808 caatttatagggacttatataagaaatttaagggaatttacataagaaattgcaaaaaa 33103866  T

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Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43139794 - 43139882
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggag 89  Q
    |||||||| |||||||||||||||||| || |||||||||||||| ||||| || |||||||||||||||||||||| |||| ||||||    
T  43139794 aaatctaaagaaattgctcaatttataggggtttatataagaaattaagaggaacttacataagaaattgcaaaaaaattggaccggag 43139882  T

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Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 40277369 - 40277272
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcccagacaa 98  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||||  | ||  |||||||||| |||||||||||||||||| ||||||||| |||||    
T  40277369 aaatgtaaagaaattgcccaatttatagggatttatataagaaatttatagggatttacataaaaaattgcaaaaaatttggcccggagcccggacaa 40277272  T

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Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14539785 - 14539703
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttggg 83  Q
    |||||||| ||||||||  |||||||| | |||||||||||||||  |||| || ||||||||||||||||||||||||||||    
T  14539785 aaatctaaagaaattgcctaatttataggaatttatataagaaattcagaggaaattacataagaaattgcaaaaaatttggg 14539703  T

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Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 6318539 - 6318448
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattg-caaaaaatttgggccggagcc 91  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||  | ||  |||||||||||||||||  |||||| |||||||||||||    
T  6318539 aaatctaaagaaattgcccaatttatagggatttatataagaaattcatagggatttacataagaaattgaaaaaaaaattgggccggagcc 6318448  T

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Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14942125 - 14942034
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  14942125 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 14942034  T

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Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 41674787 - 41674657
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcccagacaatt 100  Q
    |||||||| |||||||  |||||||||||| ||||||||| ||||  ||||| ||||||||||||||||||| || | ||||| |||||||  ||||| |    
T  41674787 aaatctaaagaaattgtccaatttataagggtttatataaaaaattcagagagatttacataagaaattgcataaca-ttgggtcggagcctcgacaact 41674689  T
Q  101 tcctagactggccgggcattagaaccacccct 132  Q
     || || || | ||||| ||||||||||||||    
T  41674688 gcccaggctcgtcgggccttagaaccacccct 41674657  T

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Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 42769839 - 42769748
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  42769839 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 42769748  T

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Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 28321778 - 28321701
Alignment:
Q  7 aatgaaattgctcaatttataaggatttatataagaaat-caagagaaatttacataagaaattgcaaaaaatttgggc 84  Q
    ||||||||||| |||||||||||| ||||||||||| || || ||||| ||||||||||||||||||||||| ||||||    
T  28321778 aatgaaattgcccaatttataagggtttatataagatattcaggagaa-tttacataagaaattgcaaaaaaattgggc 28321701  T

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Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 19181595 - 19181676
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgg 82  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | || |||||||| |||||||||||||||||||||    
T  19181595 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcataggaatttacacaagaaattgcaaaaaatttgg 19181676  T

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Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 29846489 - 29846580
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||  ||||||||| || ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  29846489 aaatgtaaagaaattgtccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 29846580  T

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Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 14186510 - 14186430
Alignment:
Q  10 gaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagc 90  Q
    |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| |||||||| |||||||||||| |||||||    
T  14186510 gaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattacaaaaaatttggcccggagc 14186430  T

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Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33009720 - 33009799
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaattt 80  Q
    |||||||| |||||||  |||||||||||||||||||||| ||||  | ||  ||||| ||||||||||| |||||||||    
T  33009720 aaatctaaagaaattgtccaatttataaggatttatataacaaattcatagggatttatataagaaattgtaaaaaattt 33009799  T

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Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 3597918 - 3597880
Alignment:
Q  54 atttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  3597918 atttacacaagaaattgcaaaaaatttggcccggagccc 3597880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 40780134 - 40780179
Alignment:
Q  32 tttatataagaaatcaagagaaatttacataagaaattgcaaaaaa 77  Q
    ||||||||||||||  |||| ||||||||||||||||| |||||||    
T  40780134 tttatataagaaattcagaggaatttacataagaaattacaaaaaa 40780179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2888088 - 2888164
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaa 77  Q
    ||||||||  |||||| |||||||||| |  ||||||||| ||||  | ||| |||||||||||||||| |||||||    
T  2888088 aaatctaaaaaaattgttcaatttataggagtttatataaaaaattcatagagatttacataagaaattacaaaaaa 2888164  T

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Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 10334227 - 10334316
Alignment:
Q  3 atctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||| |||||||| |||||||||||  ||||||||||||||  |||| ||||||||||||||||||||||||| ||||||| ||||||    
T  10334227 atctaaagaaattgcccaatttataagagtttatataagaaattcagaggaatttacataagaaattgcaaaaaaattgggccagagccc 10334316  T

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Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 17303195 - 17303104
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||||| |||||||| ||||||| |||| ||||||||||||||  | || ||||||||||||||||||||||||| ||||| ||||||||    
T  17303195 aaatctaaagaaattgcccaatttacaagggtttatataagaaattcataggaatttacataagaaattgcaaaaaaattgggtcggagccc 17303104  T

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Target: chr7; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 44164824 - 44164733
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||||||||||| ||||||||||||||||||||| |||||||||    
T  44164824 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagaaatttacacaagaaattgcaaaaaatttggcccggagccc 44164733  T

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Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10576720 - 10576811
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  10576720 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 10576811  T

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Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 24320520 - 24320429
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||    || |||||||| ||||||||||||||||||||| |||||||||    
T  24320520 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcgtaggaatttacacaagaaattgcaaaaaatttggcccggagccc 24320429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33057738 - 33057647
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||||| ||||||| |||||||||| ||  |||||||||||||  | ||  ||||||||||||||||| |||||| ||||||||||||||    
T  33057738 aaatctaaagaaattgttcaatttataggggattatataagaaattcatagggatttacataagaaattgaaaaaaaattgggccggagccc 33057647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34707163 - 34707254
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  34707163 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 34707254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 19334641 - 19334556
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccg 86  Q
    |||||||| |||||||  ||||||||| || ||||||||||||||  | ||  |||||||||||||||||||||||| ||||||||    
T  19334641 aaatctaaagaaattgtccaatttataggggtttatataagaaattcataggtatttacataagaaattgcaaaaaaattgggccg 19334556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15017820 - 15017896
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaa 77  Q
    |||||||| |||||||  ||||||||| |  ||||||||||||||  |||| |||||||||||||||||||||||||    
T  15017820 aaatctaaagaaattgtccaatttatacgcgtttatataagaaattcagaggaatttacataagaaattgcaaaaaa 15017896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34259565 - 34259656
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| |||||||||||||||| |||| |||||||||    
T  34259565 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaaattggcccggagccc 34259656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 92
Target Start/End: Original strand, 41853210 - 41853249
Alignment:
Q  53 aatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  41853210 aatttaaataagaaattgcaaaaaatttgggccggagccc 41853249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 43342483 - 43342533
Alignment:
Q  27 aaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaa 77  Q
    |||| ||||||||||||||  |||| |||||||||||||||||||||||||    
T  43342483 aagggtttatataagaaattcagaggaatttacataagaaattgcaaaaaa 43342533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 32876611 - 32876523
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggag 89  Q
    |||| ||| |||||||  ||||||||| || ||||||||||||||  | ||  || |||| ||||||||||||||||||||| ||||||    
T  32876611 aaatgtaaagaaattgtccaatttataggggtttatataagaaattcatagggatctacacaagaaattgcaaaaaatttggcccggag 32876523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 29238206 - 29238133
Alignment:
Q  19 caatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||| || || ||||||||||||||  | ||  ||||||| |||||||||||||||| |||| |||||||||    
T  29238206 caatttttaggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaaattggcccggagccc 29238133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29556020 - 29555932
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggag 89  Q
    |||| ||| |||||||  ||||||||| || ||||||||||||||  | || |||||||| |||||||||  ||||| |||| ||||||    
T  29556020 aaatgtaaagaaattgtccaatttataggggtttatataagaaattcataggaatttacacaagaaattgtcaaaaaattggcccggag 29555932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 10907709 - 10907638
Alignment:
Q  21 atttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    ||||||| || ||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  10907709 atttataggggtttatataagaaattcagaggaatttacataagaaattgcaaaaaatttgggccggagccc 10907638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 38859898 - 38859989
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    ||||||||  ||||||| ||||||||| || ||||||||||||||  | || |||||||||||||||||| |||||||||||||||||||||    
T  38859898 aaatctaaaaaaattgcccaatttataggggtttatataagaaattcataggaatttacataagaaattgaaaaaaatttgggccggagccc 38859989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 30745391 - 30745481
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcc 91  Q
    |||| ||| |||||||  ||||||||| ||||||||| |||||||  |||||||||||||||| ||||||||||| ||||||| |||||||    
T  30745391 aaatttaaagaaattgtccaatttatagggatttataaaagaaattcagagaaatttacataaaaaattgcaaaatatttgggtcggagcc 30745481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 30766842 - 30766932
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcc 91  Q
    |||| ||| |||||||  ||||||||| ||||||||| |||||||  |||||||||||||||| ||||||||||| ||||||| |||||||    
T  30766842 aaatttaaagaaattgtccaatttatagggatttataaaagaaattcagagaaatttacataaaaaattgcaaaatatttgggtcggagcc 30766932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 48392487 - 48392396
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| |||||||||||| ||||||||| |||||||||||||||||  | ||  ||||||| |||||||||||||||| ||||  ||||||||    
T  48392487 aaatgtaatgaaattgcccaatttatagggatttatataagaaattcatagggatttacacaagaaattgcaaaaaaattggctcggagccc 48392396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 42456628 - 42456702
Alignment:
Q  10 gaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggc 84  Q
    |||||||| ||||||||| || ||||||||||||||  | || |||||||||||||||| |||||||||||||||    
T  42456628 gaaattgcccaatttataggggtttatataagaaattcataggaatttacataagaaatagcaaaaaatttgggc 42456702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 47022749 - 47022840
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| ||||||||  |||||||| |  ||||||||||||||  | ||| ||||||| ||||||||||||||||||||| |||||||||    
T  47022749 aaatataaagaaattgcctaatttataggagtttatataagaaattcatagagatttacacaagaaattgcaaaaaatttggcccggagccc 47022840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 49902515 - 49902606
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| | ||||||| || ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  49902515 aaatgtaaagaaattgccctatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 49902606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 14796942 - 14797020
Alignment:
Q  20 aatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcccagacaa 98  Q
    ||||||||||  | ||||||||||||  |||| ||||||||||| |||||||||||| | |||| ||||||||||||||    
T  14796942 aatttataagtgtgtatataagaaattcagaggaatttacataaaaaattgcaaaaattatgggtcggagcccagacaa 14797020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 14805816 - 14805894
Alignment:
Q  20 aatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcccagacaa 98  Q
    ||||||||||  | ||||||||||||  |||| ||||||||||| |||||||||||| | |||| ||||||||||||||    
T  14805816 aatttataagtgtgtatataagaaattcagaggaatttacataaaaaattgcaaaaattatgggtcggagcccagacaa 14805894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 37189705 - 37189774
Alignment:
Q  19 caatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggag 89  Q
    |||||||||  ||||||||||||||||  | ||| |||||||||||||||||| |||||||||||||||||    
T  37189705 caatttatagagatttatataagaaattcatagagatttacataagaaattgc-aaaaatttgggccggag 37189774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 10156066 - 10156006
Alignment:
Q  32 tttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    ||||||||||||||  | || |||||||| |||||||||||||||| |||| |||||||||    
T  10156066 tttatataagaaattcataggaatttacacaagaaattgcaaaaaaattggcccggagccc 10156006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 42517344 - 42517284
Alignment:
Q  32 tttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  42517344 tttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 42517284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 26835385 - 26835472
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccgga 88  Q
    ||||||||  |||||| |||||||||| |  ||||||||||||||  | |  ||||||||||| ||||||||||||| || |||||||    
T  26835385 aaatctaaaaaaattgttcaatttataggagtttatataagaaattcatatgaatttacataataaattgcaaaaaaattaggccgga 26835472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 13131947 - 13132017
Alignment:
Q  5 ctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaa 75  Q
    |||| |||||||  |||||||||  ||||||||||| ||||  |||| ||||||||||||||||| |||||    
T  13131947 ctaaagaaattgtccaatttatagtgatttatataaaaaatttagaggaatttacataagaaattacaaaa 13132017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 3346833 - 3346914
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgg 82  Q
    |||| ||| |||||||  ||||||||| || ||||||||||||||  | ||  ||||||| || ||||||||||||||||||    
T  3346833 aaatgtaaagaaattgtccaatttataggggtttatataagaaattcatagggatttacacaacaaattgcaaaaaatttgg 3346914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 26511661 - 26511624
Alignment:
Q  55 tttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    ||||||||||||||||||||||| || |||||||||||    
T  26511661 tttacataagaaattgcaaaaaaattaggccggagccc 26511624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13103199 - 13103109
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcc 91  Q
    |||||||| |||||||| |||||||||| | ||||||||||||||  |||| ||||||||||| ||||||||||||||||| ||| |||||    
T  13103199 aaatctaaagaaattgcccaatttataaaggtttatataagaaattcagaggaatttacataaaaaattgcaaaaaatttgagccagagcc 13103109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 24497647 - 24497565
Alignment:
Q  9 tgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcc 91  Q
    ||||||||| ||||||||| || ||||||||||||||  |||| |||||||| || |||||||||||||||||||||||||||    
T  24497647 tgaaattgcccaatttataggggtttatataagaaattcagaggaatttacacaaaaaattgcaaaaaatttgggccggagcc 24497565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 27863746 - 27863836
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataag-aaattgcaaaaaatttgggccggagc 90  Q
    |||||||| |||||||  |||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||||| |||||| ||||||    
T  27863746 aaatctaaagaaattgtccaatttataagggtttatataagaaattcagagaaatttacataagaaaattgcaaaaagtttgggtcggagc 27863836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 28750722 - 28750606
Alignment:
Q  10 gaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcccagacaatttcctagact 109  Q
    |||||||| ||||||||| || ||||||||||||||  |||  ||||||||||||||||||||||||| |||| || ||||||   ||||| || |||||    
T  28750722 gaaattgcccaatttataggggtttatataagaaattcagaagaatttacataagaaattgcaaaaaaattggcccagagcccgagcaattgcccagact 28750623  T
Q  110 ggccgggcattagaacc 126  Q
     ||||||| ||||||||    
T  28750622 cgccgggccttagaacc 28750606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13627587 - 13627678
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||||||||||||| || ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  13627587 aaatgtaaagaaattgctcaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 13627678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 1728014 - 1727924
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcc 91  Q
    |||| ||| |||||||||||||||||| || ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| ||||||||    
T  1728014 aaatgtaaagaaattgctcaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcc 1727924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9231935 - 9231844
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||| ||||||| |||||||||||||||| |||| |||||||||    
T  9231935 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagagatttacacaagaaattgcaaaaaaattggcccggagccc 9231844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14309879 - 14309798
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgg 82  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||||  | ||  ||||||| |||||||||||||||||||||    
T  14309879 aaatgtaaagaaattgcccaatttatagggatttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 14309798  T

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Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 24694732 - 24694641
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| |  ||||||||||||||  | ||  ||||||| ||||||||||||||||||||| |||||||||    
T  24694732 aaatgtaaagaaattgcccaatttataggagtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagccc 24694641  T

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Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 34088789 - 34088834
Alignment:
Q  53 aatttacataagaaattgcaaaaaatttgggccggagcccagacaa 98  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||    
T  34088789 aatttacataagaaattacaaaaaatttgggccggagcccggacaa 34088834  T

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Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 34103732 - 34103865
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagcccagacaatt 100  Q
    |||||||| |||||| | ||||||||| || ||||||||||||||  |||| ||||||||||| ||||| |||||||  |||| | ||| || ||||| |    
T  34103732 aaatctaaagaaatttcccaatttatacgggtttatataagaaattcagaggaatttacataataaattacaaaaaacgtgggtcagagtccggacaact 34103831  T
Q  101 tcctagactggccgggcattagaaccacccctaa 134  Q
     ||||| || ||  ||| |||||||| |||||||    
T  34103832 acctaggctcgctaggccttagaacctcccctaa 34103865  T

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Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 35806841 - 35806932
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||| ||||||| ||||||||||||||||||||| |||||||||    
T  35806841 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagagatttacacaagaaattgcaaaaaatttggcccggagccc 35806932  T

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Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 16591447 - 16591369
Alignment:
Q  10 gaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccgga 88  Q
    |||||||| |||||||||  ||||||||||||||||    ||||||||||||||||||||||||||||||| |||||||    
T  16591447 gaaattgcccaatttatagtgatttatataagaaattcttagaaatttacataagaaattgcaaaaaatttaggccgga 16591369  T

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Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 16523155 - 16523244
Alignment:
Q  3 atctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||| ||| |||| ||||||||| |||||||||||||||||  | ||  ||||||||| ||||||| |||||||||||||||||||||    
T  16523155 atctaaagaagttgcccaatttatagggatttatataagaaattcatagggatttacatatgaaattgtaaaaaatttgggccggagccc 16523244  T

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Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 10112103 - 10112185
Alignment:
Q  10 gaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||||||  |||||||||||  |||||||||||||| ||||| ||||||||||| ||||||||||||| ||| ||| ||||||    
T  10112103 gaaattgtccaatttataagagtttatataagaaattaagaggaatttacataaaaaattgcaaaaaaattgagccagagccc 10112185  T

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Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 43282929 - 43282847
Alignment:
Q  4 tctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccg 86  Q
    |||||||||||| | ||||||||| |||||||||||| ||||  |||  |||||||||||||||||| |||||||||| ||||    
T  43282929 tctaatgaaattacccaatttatagggatttatataataaattcagaagaatttacataagaaattgtaaaaaatttgagccg 43282847  T

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Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 33934440 - 33934359
Alignment:
Q  11 aaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    ||||||| ||||||||| || ||||||||||||||  | || |||||||| ||||||||||||||||||||| | |||||||    
T  33934440 aaattgcccaatttataggggtttatataagaaattcataggaatttacaaaagaaattgcaaaaaatttggcctggagccc 33934359  T

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Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22324643 - 22324734
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||  | ||  ||||||| |||||||| |||||||||||| |||||||||    
T  22324643 aaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattacaaaaaatttggcccggagccc 22324734  T

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Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 2824250 - 2824172
Alignment:
Q  14 ttgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||||||||||||  |||||||||||||  |||| ||||||||||| |||||||||||||||  || ||||||||    
T  2824250 ttgcccaatttataaggggttatataagaaatttagaggaatttacataaaaaattgcaaaaaattcaggtcggagccc 2824172  T

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Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 16819045 - 16818965
Alignment:
Q  10 gaaattgctcaatttataaggatttatataagaaat-caagagaaatttacataagaaattgcaaaaaatttgggccggagc 90  Q
    |||||| | ||||||||| || |||||||||||||| |||| || ||||||| |||||||||||||||||||||||| ||||    
T  16819045 gaaattacccaatttataggggtttatataagaaattcaag-gagatttacaaaagaaattgcaaaaaatttgggccagagc 16818965  T

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Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21525405 - 21525496
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||  ||||||||| || ||||||||||||||  | ||  ||||||| ||||||||||||||||||||  |||||||||    
T  21525405 aaatgtaaagaaattgtccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgacccggagccc 21525496  T

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Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 26021443 - 26021534
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||| | ||||||||| || ||||||||||||||  | ||  ||||||| |||||||||||||||||||||  ||||||||    
T  26021443 aaatgtaaagaaattacccaatttataggggtttatataagaaattcatagggatttacaaaagaaattgcaaaaaatttggcacggagccc 26021534  T

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Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 42072475 - 42072566
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccggagccc 92  Q
    |||| ||| |||||||  ||||||||| || ||||||||||||||  | ||  ||||||| |||||||||||||||| |||| |||||||||    
T  42072475 aaatgtaaagaaattgtccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaaattggcccggagccc 42072566  T

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Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 42013919 - 42014000
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgg 82  Q
    |||| ||| |||||||| ||||||||| |  ||||||||||||||  | ||  ||||||| |||||||||||||||||||||    
T  42013919 aaatataaagaaattgcccaatttataggagtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 42014000  T

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Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 19334882 - 19334917
Alignment:
Q  53 aatttacataagaaattgcaaaaaatttgggccgga 88  Q
    |||||| |||||||||||||||||||||||||||||    
T  19334882 aatttatataagaaattgcaaaaaatttgggccgga 19334917  T

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Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 20912 - 20836
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaa 77  Q
    ||||||||  ||||||  |||||||||  | ||||||||||||||  |||| |||||||||||||||||||||||||    
T  20912 aaatctaaaaaaattgtccaatttatagagctttatataagaaattcagaggaatttacataagaaattgcaaaaaa 20836  T

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Target: scaffold0079 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 54566 - 54653
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaatttgggccgga 88  Q
    |||| ||| |||||||  ||||||||| |||||||||||| ||||  | || |||||||| || ||||||||||||| |||| |||||    
T  54566 aaatgtaaagaaattgtccaatttatagggatttatataaaaaattcataggaatttacacaaaaaattgcaaaaaaattggcccgga 54653  T

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Target: scaffold0620 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 2240 - 2276
Alignment:
Q  53 aatttacataagaaattgcaaaaaatttgggccggag 89  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  2240 aatttacataagaaattacaaaaaatttgggtcggag 2276  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 34533 - 34457
Alignment:
Q  1 aaatctaatgaaattgctcaatttataaggatttatataagaaatcaagagaaatttacataagaaattgcaaaaaa 77  Q
    |||||||| |||| ||  |||||||||  |||||||||||  |||  ||||  ||||||||||||||||||||||||    
T  34533 aaatctaaagaaactgtccaatttatagagatttatataaagaattcagagggatttacataagaaattgcaaaaaa 34457  T

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