View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5659_low_11 (Length: 245)
Name: NF5659_low_11
Description: NF5659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5659_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 39038032 - 39037805
Alignment:
| Q |
1 |
catattacacctaaaacccgtaaaactgtaggaacgactctcaattaaatttcataaaacattatgaaatcttataaattctatgaaggtttaagagtta |
100 |
Q |
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|||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
39038032 |
catattacacctaaaacctgtaaaactctaggaacgactctcagttaaatttcataaaacattatgaaatcttataaattctctgaaggtttaagagtta |
39037933 |
T |
|
| Q |
101 |
taggggcgagttgttttattaaataaagagtatatactgtgccataaaaaataaaagcttgagcattttgattgctggtattttctctctttctctttcc |
200 |
Q |
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|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |
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| T |
39037932 |
taggggagagttgttttaataaataaagagtatatactgtgccataaaaaataaaagctcgagcattttgattgcttgtattttctctctttctctttcc |
39037833 |
T |
|
| Q |
201 |
ctttctgataatcgaagtttaaggaaga |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
39037832 |
ctttctgataatcgaagtttaaggaaga |
39037805 |
T |
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