View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5665-Insertion-3 (Length: 626)
Name: NF5665-Insertion-3
Description: NF5665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5665-Insertion-3 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 553; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 553; E-Value: 0
Query Start/End: Original strand, 7 - 626
Target Start/End: Complemental strand, 34095491 - 34094872
Alignment:
| Q |
7 |
atatcaataccctcaaaaggcaataatcaatgagaagaaatgttgaccatcccacctcttgaggaatatatttgtcctctcccacgtaacactgaatatt |
106 |
Q |
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| T |
34095491 |
atatcaataccctcaaaaggcaataatcaatgagaagaaatgttgaccatcccacctcttgaggaatatatttgtcctctcccacgtaacactgaatatt |
34095392 |
T |
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| Q |
107 |
ttatatgctatccaaagctgaaacagttttaagtttagatttattcaaaaatttccaactatatacacttgaaagtgtaaaggagacacatgtatacatc |
206 |
Q |
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| T |
34095391 |
ttatatgctatccaaagctgaaacagttttaagtttagatttattcaaaaatttccaactatatacacttgaaagtgtaaaggagacacatgtatacatc |
34095292 |
T |
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| Q |
207 |
atggggtgactcatttctgcttgctgatagatacagactggtaatccaatgcaatgtcgccacacgtgtattatcacagtnnnnnnnnnnnnnnnnntta |
306 |
Q |
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| T |
34095291 |
atggggtgactcatttctgcttgctgatagatacagactggtaatccaatgcaatgtcgccacacgtgtattatcacaatagagagagaaagagagatta |
34095192 |
T |
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| Q |
307 |
gagcttaataggattgctttttaatcaatatttaattaattcaattaaaagacaagatgtaggtccattttcactaaccaggataatacataaatgatta |
406 |
Q |
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| T |
34095191 |
gagcttaataggattgctttttaatcaatatttaattaattcaattaaaagacaagatgtaggtccattttcactaaccaggataatacataaatgatta |
34095092 |
T |
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| Q |
407 |
gtatgtgattaattaggaaacatgtcttactattgaaacgaaacccctaatgggattttcccttttgatatgttggaatccattttgtcacccaaaacat |
506 |
Q |
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| T |
34095091 |
gtatgtgattaattaggaaacatgtcttactattgaaacaaaactcctaatgggattttcccttttgatatgttggaatccattttgtcacccaaaacat |
34094992 |
T |
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| Q |
507 |
ggtcaagagaaaagatctgaattgctgctggcatgctttttggttgtgcccctggctgccagtacatataccttttgaaatatggcaaacaaaaagtggt |
606 |
Q |
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| T |
34094991 |
ggtcaagagaaaagatctgaattgctgctggcatgctttttggttgtgcccctggctgccagtacatataccttttgaaatatggcaaacaaaaagtggt |
34094892 |
T |
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| Q |
607 |
caacatgtttcattcttgtg |
626 |
Q |
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| T |
34094891 |
cagcatgtttcattcttgtg |
34094872 |
T |
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