View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5665_high_17 (Length: 251)
Name: NF5665_high_17
Description: NF5665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5665_high_17 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 5064844 - 5064595
Alignment:
| Q |
2 |
gagtaggagcacagagattgttgaatgacaaatccctacaacatgtagaagggttattacactaaacatttaagaggaaaacaaatttaaaaacacaaaa |
101 |
Q |
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|||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5064844 |
gagtaggaccactgagattgttgaatgacaaatccctacagcatgtagaagggttattacactaaacatttaagaggaaaacaaatttaaaaacacaaaa |
5064745 |
T |
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| Q |
102 |
actgtgacagagtgcatacaagaacgaaagtcctgtaagattagcaacaagttgagggatctgtccagatagtttatttttgctgagccgcctgaaatac |
201 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5064744 |
actgtgacagagtgcatacaagaacgaaagtcctgtaagattagcaacaagttgagggatctgtccagatagtttatttttgctgagccgcctgaaataa |
5064645 |
T |
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| Q |
202 |
ttggcgtgaataaattaggaagtacacagtgggagaaaggataacgagtt |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5064644 |
ttggcgtgaataaattaggaagtacacagtgggagaaaggataacgagtt |
5064595 |
T |
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