View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5666_high_11 (Length: 348)
Name: NF5666_high_11
Description: NF5666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5666_high_11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 11 - 348
Target Start/End: Complemental strand, 45315369 - 45315032
Alignment:
| Q |
11 |
cacagagtagtggacgggcaattatagatttgatatatattttttattttgttgacaagatcataggtttgataaagattacagtaaagaaaattaaaat |
110 |
Q |
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| T |
45315369 |
cacagagtagtggacgggcaattatagatttgatatattttttttattttgttgacaagatcataggtttgataaagattacagtaaagaaaattaaaat |
45315270 |
T |
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| Q |
111 |
aaatcttcttatcattaagaaaaatgttagtagaaatgcgtttggaatgcatacgatggtataaatcataaatttgttataaacgatcaaacgttttgat |
210 |
Q |
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| T |
45315269 |
aaatcttcttatcattaagaaaaatgttagtagaaaggcgtttggaatgcatacgatggtataaatcataaatttgttataaacgatcaaacgttttgat |
45315170 |
T |
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| Q |
211 |
atttttctctctaaagtgaaatttattttagaaaaaccaaatgcacgtaattatcatgtagtcatacacaaatcattatgtgctatgctcttcctctgcc |
310 |
Q |
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| T |
45315169 |
atttttctctctaaagtgaaatttattttagaaaaaccaaatgcacgtaattatcatgtagtcatacacaaatcattatgtgctatgctcttcctctgcc |
45315070 |
T |
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| Q |
311 |
tagcatctcgaacagaattaacaaattttttctcgtta |
348 |
Q |
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| T |
45315069 |
cagcatctcgaacagaattaacaaattttttcttgtta |
45315032 |
T |
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