View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5666_low_16 (Length: 249)
Name: NF5666_low_16
Description: NF5666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5666_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 45315045 - 45314814
Alignment:
| Q |
1 |
attttttctcgttatgtgaactacaaaaataaaacactgaactaataatattaagcaaaaatttaacccactggcttacgtagaagaacgaaaagttgca |
100 |
Q |
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| T |
45315045 |
attttttcttgttatgtgaactacaaaaataaaacactgaactaataatattaagcaaaaatttaacccactggcttacgtagaagaacgaaaagttgca |
45314946 |
T |
|
| Q |
101 |
attgcatccatttcttctttaagaagaagagcatcaatgaaggcatcaagactctctccttgcatcacatcgtctatgttgtgataagtgataccaactc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45314945 |
attgcatccatttcttctttaagaagaagagcatcaatgaaggcatcaagactctctccttgcatcacatcgtctatgttgtgataagtgataccaactc |
45314846 |
T |
|
| Q |
201 |
tatgatcagttacacggccttgaggaaagttg |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
45314845 |
tatgatcagttacacggccttgaggaaagttg |
45314814 |
T |
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