View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5672_low_19 (Length: 251)
Name: NF5672_low_19
Description: NF5672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5672_low_19 |
 | |
|
| [»] scaffold0006 (6 HSPs) |
| | |
|
| [»] scaffold0460 (1 HSPs) |
| | |
|
| [»] scaffold0068 (1 HSPs) |
| | |
|
| [»] scaffold0069 (2 HSPs) |
| | |
|
| [»] scaffold0012 (1 HSPs) |
| | |
|
| [»] scaffold0783 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0006 (Bit Score: 172; Significance: 2e-92; HSPs: 6)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 58660 - 58445
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||| |||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
58660 |
actttgcgcagtaggagttgtgattaaatattttagtccattgcattttattatctccaactgtgtcaaatgattaagggtgacagaggaaggcatcaaa |
58561 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
58560 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaactcaagaactgggtcaatttgggatccttcctcacatatatgttgaagtttaggca |
58461 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
||| || ||||||||| |
|
|
| T |
58460 |
attcatgcaatatcag |
58445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 146491 - 146276
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
146491 |
acttcgtgcagtaggagttgtgaataaatattttagcccattgcattttattatctccaactgcgtcagatgattaagggtgacggaggaaggcatcaaa |
146392 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||||||| ||||||||||||| ||||| |||| |||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||||||| |
|
|
| T |
146391 |
tttgtcaaactagaacaactacgaacccttaagtattcaaggaactcaagaactgggtcaatttgagatccttcatcacatatatgttgaagtttaggta |
146292 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
||| |||||| ||||| |
|
|
| T |
146291 |
attcattcaacatcag |
146276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 141959 - 141744
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
141959 |
actttgcgccgtaggagttgtgaataaatattttagcccattgcattttattatctccaactgcgtcagatgattaagagtgacagaggaaggcatcaaa |
141860 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||||||| ||||||||||||| ||||| |||| |||||||||| |||||||||||||||||||| |||||||| | |||||||| |||||||||||||| |
|
|
| T |
141859 |
tttgtcaaactagaacaactacgaaccattaagtattcaaggaactcaagaactgggtcaatttgagatccttcatcacatatatattgaagtttaggta |
141760 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
||| |||||| ||||| |
|
|
| T |
141759 |
attcattcaacatcag |
141744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 111371 - 111161
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| |||||| |||||||||||||||||||||||||||||||| ||| | ||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
111371 |
acttcgtgcagtaggagttgtgatcaaatattttagcccattgcattttattatctctaaccgcctcagatgattaagtgtgacagaggaaggcatcaaa |
111272 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||| ||| ||||||||| ||| |||| ||||| ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
111271 |
tttatcaaactagaacagctatcaaccactaagtgttcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggta |
111172 |
T |
|
| Q |
201 |
attgattcaat |
211 |
Q |
| |
|
||||||||||| |
|
|
| T |
111171 |
attgattcaat |
111161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 12 - 216
Target Start/End: Complemental strand, 220220 - 220016
Alignment:
| Q |
12 |
taggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgtcagact |
111 |
Q |
| |
|
|||||| ||| || |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||| ||| ||| |
|
|
| T |
220220 |
taggagttgtaatcaaatattttagcccattgcattttattatctctaacattgtgagatgattaagggtgacagaggaaggcatcaaatttatcaaact |
220121 |
T |
|
| Q |
112 |
agaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattgattcaat |
211 |
Q |
| |
|
|||||||| | ||| |||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
220120 |
agaacaacaatcaacaagtaagtattcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggtaattgattcaat |
220021 |
T |
|
| Q |
212 |
atcag |
216 |
Q |
| |
|
||||| |
|
|
| T |
220020 |
atcag |
220016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 169623 - 169408
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| |||||| ||||||||||||||||||||| |||||| ||| |||| ||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
169623 |
acttcgtgcagtaggagttgtgatcaaatattttagcccattgcatcttattacctctaactttgtgagatgattaagggtgacagaggaaggcatcaaa |
169524 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||| ||| ||||||||| | ||| | ||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
169523 |
tttatcaaactagaacagttttcaacatttaagcattcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggta |
169424 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
| ||||||||| |||| |
|
|
| T |
169423 |
agtgattcaatgtcag |
169408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 164; Significance: 9e-88; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 20792472 - 20792687
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20792472 |
acttcgtgcggtaggagttgtgatcaaatattttagcccattgcattttattatctccaactttgtcagatgattaagggtgacggaggaaggcatcaaa |
20792571 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||||||||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
20792572 |
tttgtcagactagaacaactatcaacatctaagtattcaaggaactcaagaactgggtcaatttgggatccttcctcacatatatgttgaagtttaggta |
20792671 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
||| |||||| ||||| |
|
|
| T |
20792672 |
attcattcaacatcag |
20792687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 26 - 216
Target Start/End: Original strand, 20813037 - 20813227
Alignment:
| Q |
26 |
aaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgtcagactagaacaactaagaa |
125 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| |||| ||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||| || || |
|
|
| T |
20813037 |
aaatattttagcccattgcattctgttatctctaactttgtgagatgattaagggtgaccgaggaaggcatcaaatttatcaaactagaacagttagaaa |
20813136 |
T |
|
| Q |
126 |
cctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattgattcaatatcag |
216 |
Q |
| |
|
| | ||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
20813137 |
catttaagcattcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggtaattgattcaatgtcag |
20813227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 152; Significance: 1e-80; HSPs: 15)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 13656730 - 13656515
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
13656730 |
acttcgtgcagtaggagttgtgaataaatattttagcccattgcattttattatctccaactgcgtcagatgattaagggtgacggaggaaggcatcaaa |
13656631 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||||||| ||||||||||||| ||||| |||| |||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||||||| |
|
|
| T |
13656630 |
tttgtcaaactagaacaactacgaacccttaagtattcaaggaactcaagaactgggtcaatttgagatccttcatcacatatatgttgaagtttaggta |
13656531 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
||| |||||| ||||| |
|
|
| T |
13656530 |
attcattcaacatcag |
13656515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 13589213 - 13588998
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| |||||| ||||||||||||||||||||| |||||| ||| ||| ||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
13589213 |
acttcgtgcagtaggagttgtgatcaaatattttagcccattgcatcttattacctctaacattgtgagatgattaagggtgacagaggaaggcatcaaa |
13589114 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
13589113 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaactcaagaattgggtcaatttgggatccttcctcacatatatgttgaagttcaggta |
13589014 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
||| | |||||||||| |
|
|
| T |
13589013 |
attcaatcaatatcag |
13588998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 13652198 - 13651983
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
13652198 |
actttgcgccgtaggagttgtgaataaatattttagcccattgcattttattatctccaactgcgtcagatgattaagtgtgacagaggaaggcatcaaa |
13652099 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||||||| ||||||||||||| |||||| |||| |||||||||| |||||||||||||||||||| |||||||| | |||||||| |||||||||||||| |
|
|
| T |
13652098 |
tttgtcaaactagaacaactacgaacctttaagtattcaaggaactcaagaactgggtcaatttgagatccttcatcacatatatattgaagtttaggta |
13651999 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
||| |||||| ||||| |
|
|
| T |
13651998 |
attcattcaacatcag |
13651983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 15897775 - 15897985
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
||||||||| ||| ||| |||||||||||||||||||| || |||||| |||| ||| |||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
15897775 |
acttcgcgctgtatgagttgtgattaaatattttagccgatcgcatttcattacctctaacttagtgagatgattaagggtgacggaggaaggcatcaaa |
15897874 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
|||| || ||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
15897875 |
tttgacaaactagaacaactacgaaccagtaagcattcaaggaactcaagaactgggtcaatttgggatccttcctcacatatatgttgaagtttaggta |
15897974 |
T |
|
| Q |
201 |
attgattcaat |
211 |
Q |
| |
|
||| ||||||| |
|
|
| T |
15897975 |
attcattcaat |
15897985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 216
Target Start/End: Complemental strand, 20488780 - 20488566
Alignment:
| Q |
2 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
101 |
Q |
| |
|
||||| ||||||| || ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
20488780 |
cttcgtgccgtagaagttgtgaatatatattttagcccattgcattttattatctccaactgcgtcagatgattaagggtgacagaggaaggcattaaat |
20488681 |
T |
|
| Q |
102 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
201 |
Q |
| |
|
|| ||| ||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||| |||||| |
|
|
| T |
20488680 |
ttatcaaactagaacaactatcaacatctaagtattcaaggaactcaagaactgggtcaatttggcatccttcctcacatatttgttgaagttcaggtaa |
20488581 |
T |
|
| Q |
202 |
ttgattcaatatcag |
216 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
20488580 |
ttcattcaatatcag |
20488566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 13508700 - 13508485
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| |||||| |||||||||||| ||||||||||||||| ||| |||| ||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
13508700 |
acttcgtgcagtaggagttgtgatcaaatattttagctcattgcattttattacctctaactttgtgagatgattaagggtggcggaggaaggcatcaaa |
13508601 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||||||| ||||||||||||| ||||| |||| |||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||||||| |
|
|
| T |
13508600 |
tttgtcaaactagaacaactacgaacccttaagtattcaaggaactcaagaactgggtcaatttgagatccttcatcacatatatgttgaagtttaggta |
13508501 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
||| |||||| ||||| |
|
|
| T |
13508500 |
attcattcaacatcag |
13508485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 13612495 - 13612280
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| |||||| |||||||||||| ||||||||||||||| ||| |||| ||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
13612495 |
acttcgtgcagtaggagttgtgatcaaatattttagctcattgcattttattacctctaactttgtgagatgattaagggtggcggaggaaggcatcaaa |
13612396 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||||||| ||||||||||||| ||||| |||| |||||||||| |||||||||||||||||||| |||||||| | ||||||||||||||||||||||| |
|
|
| T |
13612395 |
tttgtcaaactagaacaactacgaacccttaagtattcaaggaactcaagaactgggtcaatttgagatccttcatcacatatatgttgaagtttaggta |
13612296 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
||| |||||| ||||| |
|
|
| T |
13612295 |
attcattcaacatcag |
13612280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 13545068 - 13544853
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| ||||| ||||||||||||||||||||||||| ||||||| || | |||||||| |||||||||| | ||||||||||||||| |
|
|
| T |
13545068 |
acttcgtgcagtaggagttgtgaataaatattttagcccattgcatttttttatctctaaatctgtcagataattaagggtggcagaggaaggcatcaaa |
13544969 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||||||| || |||||||||| ||||||||||||||||||||| | |
|
|
| T |
13544968 |
tttgtcagactagaacaaccatcaacatctaagcattcaaggaactcaagaactgggtcaatatgagatccttcctcacatatatgttgaagtttaggca |
13544869 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
||| || ||||||||| |
|
|
| T |
13544868 |
attcatgcaatatcag |
13544853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 19136229 - 19136444
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| |||||| |||||||||||| ||||||||||||||| ||| |||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
19136229 |
acttcgtgcagtaggagttgtgatcaaatattttagctcattgcattttattacctctaactttgtgagatgattaagggtgacggaggaaggcatcaaa |
19136328 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||||||| |||||||||| || ||||| |||| |||||||||| ||||||||||| |||||||| |||||||| | ||||||||||||||||||||||| |
|
|
| T |
19136329 |
tttgtcaaactagaacaattacgaacccttaagtattcaaggaactcaagaactggatcaatttgagatccttcatcacatatatgttgaagtttaggta |
19136428 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
||| |||||| ||||| |
|
|
| T |
19136429 |
attcattcaacatcag |
19136444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 13686928 - 13686736
Alignment:
| Q |
11 |
gtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgtcagac |
110 |
Q |
| |
|
||||||| |||||| |||||||||||| ||||||||||||||| ||| |||| ||| ||||||||||||||| |||||||||||||||||||||||| || |
|
|
| T |
13686928 |
gtaggagttgtgatcaaatattttagcacattgcattttattacctctaactttgtgagatgattaagggtggcggaggaaggcatcaaatttgtcaaac |
13686829 |
T |
|
| Q |
111 |
tagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaatt |
203 |
Q |
| |
|
||||||||||| ||||| |||| |||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||| |
|
|
| T |
13686828 |
tagaacaactacgaacccttaagtattcaaggaactcaagaactgggtcaatttgagatccttcatcacatatatgttgaagtttaggtaatt |
13686736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 13672009 - 13671794
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| |||||| ||||||||||||||||||||| |||||| ||| |||| ||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
13672009 |
acttcgtgcagtaggagttgtgatcaaatattttagcccattgcatcttattacctctaactttgtgagatgattaagggtgacagaggaaggcatcaaa |
13671910 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||| ||| ||||||||| | ||| | ||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
13671909 |
tttatcaaactagaacagttttcaacatttaagcattcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggta |
13671810 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
| ||||||||| |||| |
|
|
| T |
13671809 |
agtgattcaatgtcag |
13671794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 20369900 - 20369698
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| |||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
20369900 |
acttcgtgcagtaggagttgtgatcaaatattttagcccattgcattttattatctctaaccttgtgagatgattaagggtgacagaggaaggcatcaaa |
20369801 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||| ||| ||||||||| | | ||| |||| |||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
20369800 |
tttatcaaactagaacatccatcaacaagtaagtattcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggta |
20369701 |
T |
|
| Q |
201 |
att |
203 |
Q |
| |
|
||| |
|
|
| T |
20369700 |
att |
20369698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 20478970 - 20478761
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| |||||| ||||| ||||||||||||||| |||||| ||| |||| ||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
20478970 |
acttcgtgcagtaggagttgtgatcaaatactttagcccattgcatcttattacctctaactctgtgagatgattaagggtgacagaggaaggcatcaaa |
20478871 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||| ||| ||||||||| ||| |||| |||| |||||||||| ||||||| ||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
20478870 |
tttatcaaactagaacagctatcaaccaataagtattcaaggaactcaagaa------caatttgagatccttcctcacatatatgttgaagtttaggta |
20478777 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
20478776 |
atttattcaatatcag |
20478761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 203
Target Start/End: Original strand, 16495576 - 16495774
Alignment:
| Q |
5 |
cgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttg |
104 |
Q |
| |
|
||||| ||| ||||||| ||||||||||||||||||||||| ||| |||||| | | || ||||||| || ||||||||||||| | ||||||| |
|
|
| T |
16495576 |
cgcgctgtatgagatgtaattaaatattttagcccattgcaatttcctatctcgagatactccaaatgattacggttgacggaggaaggaaacaaatttt |
16495675 |
T |
|
| Q |
105 |
tcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaatt |
203 |
Q |
| |
|
||| |||||||||| | ||| |||||| ||||||||| ||||||| |||||||||| | ||||||| || |||||||||||||||||||||||||| |
|
|
| T |
16495676 |
tcatactagaacaatcataaacacctaagccttcaaggaattcaagaattgggtcaattggagatcctttctcacatatatgttgaagtttaggtaatt |
16495774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 16466607 - 16466807
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| |||||| |||||| ||||||||||||||||||||||| ||| |||| ||| | | ||||| |||||||||||| |||||||| | |||| |
|
|
| T |
16466607 |
acttcgtgccgtaaaagatgtaattaaatattttagcccattgcaattttcaatcttcaaatattccagattattaagggtgacagaggaaggaaacaaa |
16466706 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||||| ||||||||||| | | ||| || ||||||||| |||||||||||||||||| | ||||| |||||||||| |||||||||||||||| |
|
|
| T |
16466707 |
tttgttagactagaacagccattaactatgaactcttcaaggaactcaagaactgggtcaattcgagatccctccttacataactgttgaagtttaggta |
16466806 |
T |
|
| Q |
201 |
a |
201 |
Q |
| |
|
| |
|
|
| T |
16466807 |
a |
16466807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0460 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0460
Description:
Target: scaffold0460; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 2 - 216
Target Start/End: Complemental strand, 9769 - 9555
Alignment:
| Q |
2 |
cttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaat |
101 |
Q |
| |
|
||||| ||||||| || ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9769 |
cttcgtgccgtagaagttgtgaatatatattttagcccattgcattttattatctccaactgcgtcagatgattaagggtgacagaggaaggcatcaaat |
9670 |
T |
|
| Q |
102 |
ttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaa |
201 |
Q |
| |
|
|| ||||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||| |||||| |
|
|
| T |
9669 |
ttatcagactagaacaactatcaacatctaagtattcaaggaactcaagaactgggtcaatttggcatccttcctcacatatttgttgaagttcaggtaa |
9570 |
T |
|
| Q |
202 |
ttgattcaatatcag |
216 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
9569 |
ttcattcaatatcag |
9555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 38056487 - 38056688
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
38056487 |
acttcgcgccgtaggagttgtgaatatatattttagcccattgcattttattatctccaactgcgtcagatgattaagggtgacagaggaaggcatcaaa |
38056586 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||||||| ||||| |||||||| ||| | ||||||||||||||| ||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||| |
|
|
| T |
38056587 |
tttgtcaaactaggacaactaaaaacatttaagcattcaaggaactcaagaacttggtcaatttggaatccttcctcacatatatgttgaagttcaggta |
38056686 |
T |
|
| Q |
201 |
at |
202 |
Q |
| |
|
|| |
|
|
| T |
38056687 |
at |
38056688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 30703855 - 30704070
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||| ||| || | ||||||| |||||||||| | || |||||||||||| |
|
|
| T |
30703855 |
acttcgcgcagtaggagttgtgattaaatattttagccccttgcattttcttacctctaaataagtcagatcattaagggtggcagatgaaggcatcaaa |
30703954 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||| ||| ||||| ||||| ||| | |||| |||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30703955 |
tttatcaaactaggacaacggttaacgtgtaagtattcaaggaactcaacaactgggtcaatttgggatccttcctcacatatatgttgaagtttaggta |
30704054 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
|| ||||||| |||| |
|
|
| T |
30704055 |
atacattcaatgtcag |
30704070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 39374 - 39589
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
||||||||| |||| || ||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
39374 |
acttcgcgcagtagaagttgtgaataaatattttagcccattgcattttgttacctccaactgtgtcagatgattaagggtgacggaggatggcatcaaa |
39473 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||||||||||||||||||| | ||| ||||| ||||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||||| || | |
|
|
| T |
39474 |
tttgtcagactagaacaaccatcaacatctaaccattcaaggaactcaagaactgggtcaatatgagatccttcctcacatatatgttgaagtttgggca |
39573 |
T |
|
| Q |
201 |
attgattcaatatcag |
216 |
Q |
| |
|
||| || ||||||||| |
|
|
| T |
39574 |
attcatgcaatatcag |
39589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 26 - 212
Target Start/End: Complemental strand, 27939 - 27753
Alignment:
| Q |
26 |
aaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgtcagactagaacaactaagaa |
125 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| |||| ||| ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
27939 |
aaatattttagcccattgcattctgttatctctaactttgtgagatgattaagggtgacagaggaaggcatcaaacttgttagactagaacaactaagaa |
27840 |
T |
|
| Q |
126 |
cctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattgattcaata |
212 |
Q |
| |
|
|| |||| ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
27839 |
cccgtaagacttcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggtaattgattcaata |
27753 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 26 - 212
Target Start/End: Complemental strand, 32054 - 31868
Alignment:
| Q |
26 |
aaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgtcagactagaacaactaagaa |
125 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| |||| ||| ||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
32054 |
aaatattttagcccattgcattctgttatctctaactttgtgagatgattaagggtgacagaggaaggcatcaaacttgttagactagaacaactaagaa |
31955 |
T |
|
| Q |
126 |
cctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattgattcaata |
212 |
Q |
| |
|
|| |||| ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
31954 |
cccgtaagacttcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggtaattgattcaata |
31868 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 8 - 216
Target Start/End: Original strand, 22282667 - 22282875
Alignment:
| Q |
8 |
gccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgtca |
107 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||| ||| ||| || | ||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22282667 |
gccgtaggagttgtgattaaatattttagcccatcacattttgttacctctaaatatgtcagacgattaagggtgacagaggaaggcatcaaatttgtca |
22282766 |
T |
|
| Q |
108 |
gactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattgatt |
207 |
Q |
| |
|
|||||||||| || ||| | |||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
22282767 |
gactagaacagttactaacatttaagtattcaaggaactcaagaactgggtcaatttgggatccttcctcacatatatgttgaagtttaggtaattcatt |
22282866 |
T |
|
| Q |
208 |
caatatcag |
216 |
Q |
| |
|
||| ||||| |
|
|
| T |
22282867 |
caacatcag |
22282875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 26 - 216
Target Start/End: Complemental strand, 21815943 - 21815753
Alignment:
| Q |
26 |
aaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaatttgtcagactagaacaactaagaa |
125 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| |||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
21815943 |
aaatattttagcccattgcattctgttatctctaactttgcaagatgattaaggttgacggaggaaggcatcaaatttgtcagactagaacaactatcaa |
21815844 |
T |
|
| Q |
126 |
cctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggtaattgattcaatatcag |
216 |
Q |
| |
|
| | |||| |||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
21815843 |
catgtaagtattcaagggactcaagaactgggtcaatttgggatccttcctcgcatatatgttgaagtttaggtaattcattcaatgtcag |
21815753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 117219 - 117017
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| |||||| |||||||||||||||||||||| ||||||||| ||| ||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
117219 |
acttcgtgcagtaggagttgtgatcaaatattttagcccattgcattctattatctctaaccttgtgagatgattaagggtgacagaggaaggcatcaaa |
117120 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||| ||| ||||||||| | | ||| | |||| |||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
117119 |
tttatcaaactagaacatccatcaacatgtaagtattcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagtttaggta |
117020 |
T |
|
| Q |
201 |
att |
203 |
Q |
| |
|
||| |
|
|
| T |
117019 |
att |
117017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0783 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0783
Description:
Target: scaffold0783; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 999 - 797
Alignment:
| Q |
1 |
acttcgcgccgtaggagatgtgattaaatattttagcccattgcattttattatctccaactgtgtcagatgattaagggtgacggaggaaggcatcaaa |
100 |
Q |
| |
|
|||||| || ||||||| ||||| ||||||||||| ||||||||||||| ||| || || | | ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
999 |
acttcgagcagtaggagttgtgaataaatattttaacccattgcattttgttacctttaaatatttcagatgattaagggtgacagaggaaggcatcaaa |
900 |
T |
|
| Q |
101 |
tttgtcagactagaacaactaagaacctctaagcattcaaggaaatcaagaactgggtcaatttgggatccttccttacatatatgttgaagtttaggta |
200 |
Q |
| |
|
||| ||| ||||||||| | ||| |||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||| |||| |
|
|
| T |
899 |
tttatcaaactagaacagttttcaacatctaagtattcaaggaactcaagaactgggtcaatttgagatccttcctcacatatatgttgaagttttggta |
800 |
T |
|
| Q |
201 |
att |
203 |
Q |
| |
|
||| |
|
|
| T |
799 |
att |
797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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