View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5672_low_4 (Length: 421)

Name: NF5672_low_4
Description: NF5672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5672_low_4
NF5672_low_4
[»] chr5 (19 HSPs)
chr5 (1-409)||(7649861-7650268)
chr5 (81-410)||(14616428-14616756)
chr5 (82-409)||(34405767-34406094)
chr5 (207-409)||(22159663-22159867)
chr5 (85-403)||(33575013-33575331)
chr5 (82-409)||(15532200-15532528)
chr5 (84-409)||(15542384-15542710)
chr5 (179-409)||(26712437-26712669)
chr5 (179-409)||(26982175-26982407)
chr5 (82-169)||(21680634-21680721)
chr5 (82-169)||(33921372-33921459)
chr5 (82-169)||(2499762-2499850)
chr5 (90-163)||(1810198-1810272)
chr5 (210-348)||(11988991-11989133)
chr5 (89-165)||(36330999-36331075)
chr5 (344-409)||(23993320-23993385)
chr5 (82-124)||(9691083-9691125)
chr5 (82-124)||(25185699-25185741)
chr5 (95-146)||(19686465-19686517)
[»] chr7 (21 HSPs)
chr7 (82-409)||(24783327-24783654)
chr7 (82-409)||(6967066-6967393)
chr7 (82-409)||(17866353-17866680)
chr7 (190-409)||(17863202-17863421)
chr7 (82-409)||(36842937-36843264)
chr7 (82-371)||(9765758-9766046)
chr7 (181-409)||(11279410-11279639)
chr7 (285-403)||(294789-294907)
chr7 (249-409)||(46846479-46846639)
chr7 (208-403)||(23313384-23313581)
chr7 (181-409)||(36222406-36222635)
chr7 (208-409)||(3862029-3862225)
chr7 (181-403)||(23759706-23759930)
chr7 (181-409)||(33312913-33313143)
chr7 (211-398)||(23107917-23108106)
chr7 (81-169)||(17857879-17857968)
chr7 (82-169)||(38431669-38431757)
chr7 (90-169)||(3540932-3541011)
chr7 (90-169)||(6964563-6964643)
chr7 (91-165)||(28577687-28577761)
chr7 (181-240)||(294951-295008)
[»] chr1 (24 HSPs)
chr1 (82-409)||(13495906-13496232)
chr1 (82-409)||(13493181-13493508)
chr1 (82-409)||(10764838-10765165)
chr1 (82-409)||(32505857-32506181)
chr1 (82-409)||(39546161-39546486)
chr1 (208-408)||(34066264-34066466)
chr1 (82-403)||(16190179-16190499)
chr1 (207-409)||(27282230-27282434)
chr1 (262-403)||(1936551-1936691)
chr1 (276-409)||(15297251-15297383)
chr1 (295-409)||(22456705-22456818)
chr1 (295-401)||(49147825-49147930)
chr1 (288-409)||(21153174-21153295)
chr1 (82-169)||(34552438-34552525)
chr1 (92-169)||(18392669-18392747)
chr1 (95-162)||(15297492-15297559)
chr1 (208-279)||(8435284-8435357)
chr1 (82-169)||(49716647-49716735)
chr1 (106-169)||(49720129-49720192)
chr1 (90-163)||(6206164-6206237)
chr1 (362-409)||(22453415-22453462)
chr1 (356-409)||(23990362-23990415)
chr1 (90-169)||(50196723-50196803)
chr1 (4-37)||(48505904-48505937)
[»] chr6 (24 HSPs)
chr6 (82-409)||(14790537-14790864)
chr6 (82-409)||(14795565-14795892)
chr6 (78-409)||(1838393-1838724)
chr6 (83-409)||(19664667-19664991)
chr6 (226-403)||(32704398-32704575)
chr6 (207-409)||(20527285-20527490)
chr6 (82-409)||(15534975-15535300)
chr6 (81-353)||(27649077-27649347)
chr6 (82-348)||(32427281-32427544)
chr6 (210-409)||(16883594-16883795)
chr6 (181-409)||(13017287-13017517)
chr6 (295-409)||(12980705-12980818)
chr6 (82-409)||(22221642-22221967)
chr6 (82-409)||(22247477-22247802)
chr6 (193-409)||(30978321-30978539)
chr6 (87-320)||(15540578-15540809)
chr6 (288-409)||(7769594-7769715)
chr6 (295-408)||(12983592-12983704)
chr6 (210-279)||(11183962-11184033)
chr6 (80-163)||(33678939-33679025)
chr6 (337-387)||(15540529-15540579)
chr6 (82-169)||(11411039-11411127)
chr6 (82-169)||(12747086-12747173)
chr6 (95-146)||(34502636-34502688)
[»] chr4 (13 HSPs)
chr4 (90-409)||(647211-647530)
chr4 (90-409)||(650483-650802)
chr4 (82-409)||(26062690-26063020)
chr4 (293-409)||(26060506-26060622)
chr4 (82-409)||(2541803-2542128)
chr4 (80-169)||(15851450-15851539)
chr4 (82-409)||(12171901-12172218)
chr4 (82-169)||(19929155-19929242)
chr4 (97-165)||(21217350-21217418)
chr4 (82-169)||(33400075-33400163)
chr4 (208-270)||(11649329-11649393)
chr4 (293-345)||(11649444-11649496)
chr4 (208-270)||(26060668-26060732)
[»] chr2 (15 HSPs)
chr2 (82-409)||(23673345-23673671)
chr2 (81-409)||(36326845-36327172)
chr2 (80-409)||(16294817-16295145)
chr2 (82-409)||(32575685-32576013)
chr2 (181-359)||(40017948-40018126)
chr2 (181-409)||(31626468-31626698)
chr2 (82-409)||(31528307-31528635)
chr2 (181-403)||(13709995-13710218)
chr2 (82-169)||(24384925-24385014)
chr2 (106-169)||(29436025-29436088)
chr2 (90-157)||(38315809-38315876)
chr2 (95-146)||(1503204-1503256)
chr2 (95-146)||(1506408-1506460)
chr2 (293-409)||(8427144-8427259)
chr2 (110-158)||(13572070-13572118)
[»] chr3 (20 HSPs)
chr3 (82-409)||(13979405-13979730)
chr3 (293-408)||(46731414-46731529)
chr3 (181-409)||(39563607-39563837)
chr3 (82-169)||(46731612-46731699)
chr3 (82-409)||(22626312-22626638)
chr3 (4-82)||(35091834-35091912)
chr3 (82-409)||(11138570-11138896)
chr3 (288-409)||(47412101-47412222)
chr3 (81-169)||(27055149-27055237)
chr3 (82-169)||(19869255-19869343)
chr3 (82-165)||(26822039-26822122)
chr3 (208-279)||(50096829-50096902)
chr3 (316-409)||(35366295-35366387)
chr3 (82-169)||(25492175-25492263)
chr3 (208-268)||(20536459-20536520)
chr3 (82-146)||(3306147-3306213)
chr3 (82-146)||(30157797-30157863)
chr3 (76-125)||(32366877-32366927)
chr3 (84-124)||(4225619-4225659)
chr3 (95-146)||(18883509-18883561)
[»] chr8 (12 HSPs)
chr8 (90-403)||(12575308-12575620)
chr8 (82-348)||(14418445-14418707)
chr8 (208-409)||(41778866-41779068)
chr8 (249-403)||(13096946-13097099)
chr8 (82-169)||(39659712-39659799)
chr8 (82-169)||(9467341-9467429)
chr8 (82-169)||(453863-453951)
chr8 (208-270)||(41836318-41836382)
chr8 (293-345)||(41836433-41836485)
chr8 (288-378)||(44008245-44008335)
chr8 (105-169)||(13332365-13332429)
chr8 (91-125)||(22173710-22173744)
[»] scaffold0363 (1 HSPs)
scaffold0363 (82-348)||(11-273)
[»] scaffold0440 (1 HSPs)
scaffold0440 (181-409)||(9781-10010)
[»] scaffold0567 (1 HSPs)
scaffold0567 (271-403)||(5999-6131)
[»] scaffold0352 (2 HSPs)
scaffold0352 (293-409)||(2814-2930)
scaffold0352 (82-169)||(2619-2706)
[»] scaffold0264 (1 HSPs)
scaffold0264 (82-409)||(24185-24510)
[»] scaffold0068 (1 HSPs)
scaffold0068 (82-169)||(33730-33817)
[»] scaffold0273 (1 HSPs)
scaffold0273 (90-169)||(19517-19596)
[»] scaffold0063 (1 HSPs)
scaffold0063 (322-403)||(7232-7313)
[»] scaffold0500 (1 HSPs)
scaffold0500 (322-380)||(2641-2699)
[»] scaffold0766 (1 HSPs)
scaffold0766 (91-169)||(3664-3739)
[»] scaffold0084 (2 HSPs)
scaffold0084 (82-125)||(19593-19636)
scaffold0084 (82-125)||(29672-29715)
[»] scaffold0126 (1 HSPs)
scaffold0126 (91-125)||(14094-14128)


Alignment Details
Target: chr5 (Bit Score: 324; Significance: 0; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 409
Target Start/End: Original strand, 7649861 - 7650268
Alignment:
Q  1 tcggggtttcaattctcattctattgcatgccaatttctaattgctaattccaatttccttttattataattagaacctaatgatagagatttggcaagt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7649861 tcggggtttcaattatcattctattgcatgccaatttctaattgctaattccaatttccttttattataattagaacctaatgatagagatttgacaagt 7649960  T
Q  101 gaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaaaaaggatgtataaattta 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  7649961 gaaccaaaactatcgaagtaataaataaattcgtattcacgaggaccgttgttaatttctactcaacaatttcttt-atcaaaaaggatgtataaattta 7650059  T
Q  201 tattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||| |||||||     
T  7650060 tattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttgcttttaagaatattagagagaagtatggttaagaca 7650159  T
Q  301 tttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatct 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||| ||||||    
T  7650160 tttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgattatctagtttaaagatagattaacaaggtaattctactcaatct 7650259  T
Q  401 ctttaccta 409  Q
    |||||||||    
T  7650260 ctttaccta 7650268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 81 - 410
Target Start/End: Original strand, 14616428 - 14616756
Alignment:
Q  81 atgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||        |||    
T  14616428 atgatagagatttggcaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atc 14616526  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 280  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  14616527 aaaaaggatgtatgaatttatattgattaccctaggaagttgagttgttttgtaacataaacgtaaataaaacaataaaagttgattttaagaatattag 14616626  T
Q  281 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 380  Q
    ||| ||||||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||    
T  14616627 agagaagtatggttaagacctttgaatcctccgaagttctcctatggtaattttcactcctaattcaatcaatgattatctagtttaacgacagattaac 14616726  T
Q  381 aaagtaattatacccaatctctttacctat 410  Q
    ||||||||| ||||||||||||| ||||||    
T  14616727 aaagtaattctacccaatctcttgacctat 14616756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 34406094 - 34405767
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||| ||||||||||||||||||||||| ||||        |||    
T  34406094 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggaccgttgttaatttctactcggcaatttcttt-atc 34405996  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||     
T  34405995 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttgtgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 34405896  T
Q  281 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 380  Q
    ||| ||||||| ||||||||||  ||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  34405895 agagaagtatggttaagaccttcaaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaac 34405796  T
Q  381 aaagtaattatacccaatctctttaccta 409  Q
    ||||||||| ||||||||||||| |||||    
T  34405795 aaagtaattctacccaatctcttgaccta 34405767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 22159867 - 22159663
Alignment:
Q  207 ttgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttg 304  Q
    ||||||||||||||||  |||  |||| |||  ||||||||||||||||||||||| |||||||||||||||||| ||| || |||| ||||||||||||    
T  22159867 ttgccctaggcagttggattggtttttataaagtaaacgtaaataaaacaataaaaattggttttaagaatattagagagaaatatggttaagacctttg 22159768  T
Q  305 aatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctcttt 404  Q
    |||||| ||||||||| ||||||||| | ||||||||| |||||||||||  ||||||||| ||||||||||||||||||||| | |||||||||||||     
T  22159767 aatcctccgaagttctcctatggtaaatcgcactcctagttcaatcaatgactatctagttcaacgatagattaacaaagtaactctacccaatctcttg 22159668  T
Q  405 accta 409  Q
    |||||    
T  22159667 accta 22159663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 85 - 403
Target Start/End: Complemental strand, 33575331 - 33575013
Alignment:
Q  85 tagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaaa 183  Q
    |||| |||||||||||||||||||  | ||||||||| |||| |||||||| ||||||||||| ||  |||| ||||| | |||||        || |||    
T  33575331 tagaaatttggcaagtgaaccaaattcaatcgaagtaataaa-aaattcgttttcacgaggactgtatttaacttctatttagcaattttatt-attaaa 33575234  T
Q  184 aaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttaagaatattaaa 281  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| |||| ||| |     
T  33575233 aaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttagaaaattga- 33575136  T
Q  282 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt-caatcaatgtttatctagtttaacgatagattaac 380  Q
    || ||||||| ||||| |||| ||||||| ||||| ||| |||||||||||||||||||||||| ||||||||| |||| |||||| ||||  |||||||    
T  33575135 gagaagtatggttaagtccttcgaatcctccgaagctctcctatggtaatttgcactcctaattacaatcaatgattatttagtttcacgacggattaac 33575036  T
Q  381 aaagtaattatacccaatctctt 403  Q
      ||||||| |||||||||||||    
T  33575035 ttagtaattctacccaatctctt 33575013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 409
Target Start/End: Original strand, 15532200 - 15532528
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||| ||||||||||  | ||||||||| |||| |||||||| | ||||||||| ||  |||| ||||||| |||||        ||     
T  15532200 tgatagatatttggcatgtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcatt-att 15532297  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttt-aagaatat 277  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| ||||| ||    
T  15532298 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 15532396  T
Q  278 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt-caatcaatgtttatctagtttaacgatagat 376  Q
    | | || ||||||| ||||| |||| |||||||   ||| ||| || ||||||||||||||||||| | | ||||||| |||| |||||| |||| ||||    
T  15532397 tga-gagaagtatggttaagtccttcgaatcctctaaagctctcctgtggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacagat 15532495  T
Q  377 taacaaagtaattatacccaatctctttaccta 409  Q
    ||||  ||||||| ||||||||||||| |||||    
T  15532496 taacttagtaattctacccaatctcttgaccta 15532528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 84 - 409
Target Start/End: Original strand, 15542384 - 15542710
Alignment:
Q  84 atagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaa 182  Q
    ||||| |||||||||||||||||||  | ||||||||| |||| |||||||| | ||||||||| ||  |||| ||||||| | |||        || ||    
T  15542384 atagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttaacaatttcatt-attaa 15542481  T
Q  183 aaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttt-aagaatatta 279  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| ||||| |||     
T  15542482 aaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattg 15542580  T
Q  280 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt-caatcaatgtttatctagtttaacgatagatta 378  Q
    | || ||||||| ||||| |||| |||||||   ||| ||| || ||||||||||||||||||| | | ||||||| |||| |||||| |||| ||||||    
T  15542581 a-gagaagtatggttaagtccttcgaatcctctaaagctctcctgtggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacagatta 15542679  T
Q  379 acaaagtaattatacccaatctctttaccta 409  Q
    ||  ||||||| ||||||||||||| |||||    
T  15542680 acttagtaattctacccaatctcttgaccta 15542710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 179 - 409
Target Start/End: Original strand, 26712437 - 26712669
Alignment:
Q  179 tcaaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaa-taaaag-ttggttttaagaa 274  Q
    ||||||||||||| |||| |||||||| | |||||||| ||||||||||| |||||||||||||||  || |||||  | |||||| ||||||||| |||    
T  26712437 tcaaaaaggatgtgtaaaatttatatt-agtgccctagacagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagattggtttta-gaa 26712534  T
Q  275 tattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatag 374  Q
     ||   ||| ||| ||| ||||| | || ||||||| ||| | ||| ||||| ||||||||||||||||||||||||||| |||| |||||| |||| ||    
T  26712535 aatctgagagaagaatggttaagtctttcgaatcctccgacgctctcctatgataatttgcactcctaattcaatcaatgattatttagtttcacgacag 26712634  T
Q  375 attaacaaagtaattatacccaatctctttaccta 409  Q
    ||||||  ||||||| ||||||||||||| |||||    
T  26712635 attaacttagtaattctacccaatctcttgaccta 26712669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 179 - 409
Target Start/End: Original strand, 26982175 - 26982407
Alignment:
Q  179 tcaaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaa-taaaag-ttggttttaagaa 274  Q
    ||||||||||||| |||| |||||||| | |||||||| ||||||||||| |||||||||||||||  || |||||  | |||||| ||||||||| |||    
T  26982175 tcaaaaaggatgtgtaaaatttatatt-agtgccctagacagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagattggtttta-gaa 26982272  T
Q  275 tattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatag 374  Q
     ||   ||| ||| ||| ||||| | || ||||||| ||| | ||| ||||| ||||||||||||||||||||||||||| |||| |||||| |||| ||    
T  26982273 aatctgagagaagaatggttaagtctttcgaatcctccgacgctctcctatgataatttgcactcctaattcaatcaatgattatttagtttcacgacag 26982372  T
Q  375 attaacaaagtaattatacccaatctctttaccta 409  Q
    ||||||  ||||||| ||||||||||||| |||||    
T  26982373 attaacttagtaattctacccaatctcttgaccta 26982407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 21680721 - 21680634
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| |||||||||||| ||||||||||||||||||||||  || || |||| |||||||||||||||||||||||||| |||||    
T  21680721 tgatagatatttggcaagtgtaccaaaactatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaa 21680634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 33921459 - 33921372
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| ||| |||||||| ||||||||||||||||||||||  || ||||||| ||||||||||||||| |||||||||| |||||    
T  33921459 tgatagatattcggcaagtgtaccaaaactatcgaagtagtaataaagttcgtatccacgaggaccgttgtgaatttctacttagcaa 33921372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 2499762 - 2499850
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaac-tatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| |||||||||||| |||||||  ||||||||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  2499762 tgatagatatttggcaagtgtaccaaaagatatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 2499850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 1810198 - 1810272
Alignment:
Q  90 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctact 163  Q
    ||||| |||||| ||||||| |||||||||||||||  || ||||||||||||||||||||||||||||||||||    
T  1810198 atttgacaagtgtaccaaaagctatcgaagtagtaataaagttcgtattcacgaggaccgttgttaatttctact 1810272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 348
Target Start/End: Original strand, 11988991 - 11989133
Alignment:
Q  210 ccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttgaat 307  Q
    ||||||||||||||||||  |||||||||||||||  |   ||||| ||||||| | | ||| |||| |||| ||| ||||| | |||||||||| ||||    
T  11988991 ccctaggcagttgagttgatttttgtaacataaacagattaaaaacgataaaagattgattttagaaaattagagagaagtaaggttaagaccttcgaat 11989090  T
Q  308 cctacgaagttcttctat--ggtaatttgcactcctaattcaa 348  Q
    ||| | ||||||| ||||  ||||||||||||||||| |||||    
T  11989091 cctccaaagttctcctatatggtaatttgcactcctagttcaa 11989133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 36331075 - 36330999
Alignment:
Q  89 gatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactca 165  Q
    |||||| |||||| ||| || ||||||||||| |||  ||||| | || ||||||||||||||||||||||||||||    
T  36331075 gatttgacaagtgtacctaatctatcgaagtaataataaaatttgcatccacgaggaccgttgttaatttctactca 36330999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 409
Target Start/End: Original strand, 23993320 - 23993385
Alignment:
Q  344 ttcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctttaccta 409  Q
    |||||||||||| || |||||||||||||| |||||||||  | || ||||||||||||| |||||    
T  23993320 ttcaatcaatgtctacctagtttaacgatatattaacaaaacagttctacccaatctcttgaccta 23993385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 9691125 - 9691083
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaa 124  Q
    ||||||| |||||||||||| |||||||| |||||||||||||    
T  9691125 tgatagaaatttggcaagtgtaccaaaaccatcgaagtagtaa 9691083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 25185741 - 25185699
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaa 124  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||    
T  25185741 tgatagatatttgacaagtgtaccaaaactatcgaagtagtaa 25185699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 19686517 - 19686465
Alignment:
Q  95 gcaagtgaaccaaaactatcgaagtagt-aaataaattcgtattcacgaggac 146  Q
    ||||||| || ||||||||||||||||| |||||| ||||||| |||||||||    
T  19686517 gcaagtgtactaaaactatcgaagtagtaaaataagttcgtatccacgaggac 19686465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 228; Significance: 1e-125; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 24783654 - 24783327
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 181  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||| ||||        ||||    
T  24783654 tgatagagatttgacaagtgaaccaaaactatcgaagtaataaataaatttgtatccacgaggaccgttgttaatttctactcggcaatttcttttatca 24783555  T
Q  182 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 281  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  24783554 aaaaggatgtataaatttatattgattgtccaaggcagttgagttgttttgtaacataaacttaaataaaacaataaaagttggttttaagaatattaga 24783455  T
Q  282 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 381  Q
    || ||||||| |||||||||||||||||| |||||||||  ||||||||||| || ||||||||||||||||| |||||||||||||||| |||||||||    
T  24783454 gagaagtatggttaagacctttgaatcctccgaagttctcatatggtaattttcattcctaattcaatcaatgattatctagtttaacgagagattaaca 24783355  T
Q  382 aagtaattatacccaatctctttaccta 409  Q
    |||||||||||||||||||||| |||||    
T  24783354 aagtaattatacccaatctcttgaccta 24783327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 6967393 - 6967066
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||        |||    
T  6967393 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atc 6967295  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  6967294 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 6967195  T
Q  281 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 380  Q
    ||| ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  6967194 agagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgatagattaac 6967095  T
Q  381 aaagtaattatacccaatctctttaccta 409  Q
    ||||||||| ||||||||||||| |||||    
T  6967094 aaagtaattctacccaatctcttaaccta 6967066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 82 - 409
Target Start/End: Original strand, 17866353 - 17866680
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||        |||    
T  17866353 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atc 17866451  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 280  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  17866452 aaaaaggatgtataaatttatattgattgccctaggcagttgagctgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 17866551  T
Q  281 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 380  Q
    ||| ||||||| || ||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  17866552 agagaagtatggtttagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaac 17866651  T
Q  381 aaagtaattatacccaatctctttaccta 409  Q
    ||||||||| ||||||||||||| |||||    
T  17866652 aaagtaattctacccaatctcttgaccta 17866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 190 - 409
Target Start/End: Original strand, 17863202 - 17863421
Alignment:
Q  190 gtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagta 289  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||    
T  17863202 gtataaatttatattgattgccctaggcagttgagctgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattagagagaagta 17863301  T
Q  290 tgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaatt 389  Q
    || |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  17863302 tggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagtaatt 17863401  T
Q  390 atacccaatctctttaccta 409  Q
     ||||||||||||| |||||    
T  17863402 ctacccaatctcttgaccta 17863421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 82 - 409
Target Start/End: Original strand, 36842937 - 36843264
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 181  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||  ||| || ||| ||||||||||||||||||||||||||||        |||     
T  36842937 tgatagagatttggcaagtgaaccaaaattatcgaagtaataaataagatcgaatccacaaggaccgttgttaatttctactcagcaatttcgtt-atcg 36843035  T
Q  182 aaaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 279  Q
    ||| |||||||| || ||  || | ||||||||||||||||  |||  |||| |||  ||||||||||||||||||||||||||||||||| ||||||||    
T  36843036 aaa-ggatgtattaaattcaatggtttgccctaggcagttggattggtttttataaagtaaacgtaaataaaacaataaaagttggttttatgaatatta 36843134  T
Q  280 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaa 379  Q
     ||| ||||||| |||||||||| ||||||| ||||||||| ||||||||||| ||||||||| ||||||||||| |||||||||| ||||| |||||||    
T  36843135 gagagaagtatggttaagaccttcgaatcctccgaagttctcctatggtaattcgcactcctacttcaatcaatgattatctagttcaacgacagattaa 36843234  T
Q  380 caaagtaattatacccaatctctttaccta 409  Q
    |||| ||| | ||||||||||||| |||||    
T  36843235 caaattaactctacccaatctcttgaccta 36843264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 82 - 371
Target Start/End: Complemental strand, 9766046 - 9765758
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 181  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||  ||| || ||  ||| |||||||||||||||||||||||         |||     
T  9766046 tgatagatatttggcaagttaaccaaaactatcgaagtaataaataagatcgaatccataagggccgttgttaatttctactcagca-ttttctttatcg 9765948  T
Q  182 aaaaggatgtat-aaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatt 278  Q
    |||||||||||| |||||| |   | ||||||||||||||||  |||  |||| |||  ||||| ||||||||| |||||||||||||||||||||||||    
T  9765947 aaaaggatgtattaaatttct---ggttgccctaggcagttggattggtttttataaagtaaacataaataaaataataaaagttggttttaagaatatt 9765851  T
Q  279 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacga 371  Q
    | ||| ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  9765850 agagagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttcacga 9765758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 181 - 409
Target Start/End: Complemental strand, 11279639 - 11279410
Alignment:
Q  181 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaac-aataaaagttggttttaagaatat 277  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||||||||  |   ||||| ||||||  |||||||| |||| ||    
T  11279639 aaaaaggatgtataaaatttatattggt-gccctaggcagttgagttgattttgtaacataaactgattaaaaacgaataaagattggtttttagaagat 11279541  T
Q  278 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 377  Q
    | | || ||||||| ||||| |||| ||||| | ||||||||| || |||||||||||||||||| |||||| |||| |||| |||||| |||| |||||    
T  11279540 tga-gagaagtatggttaagtccttcgaatctttcgaagttctcctctggtaatttgcactcctagttcaataaatgattatttagtttcacgacagatt 11279442  T
Q  378 aacaaagtaattatacccaatctctttaccta 409  Q
    |||  ||||||| ||||||||||||| |||||    
T  11279441 aacttagtaattctacccaatctcttgaccta 11279410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 285 - 403
Target Start/End: Complemental strand, 294907 - 294789
Alignment:
Q  285 aagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaag 384  Q
    ||||||| ||||| | || ||||||| ||||||||| ||||||||||||||||||||||| ||||||||| ||||||| || ||||| ||||||||||||    
T  294907 aagtatggttaagtctttcgaatcctccgaagttctcctatggtaatttgcactcctaatgcaatcaatgattatctaattcaacgacagattaacaaag 294808  T
Q  385 taattatacccaatctctt 403  Q
    |||||||||||||||||||    
T  294807 taattatacccaatctctt 294789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 249 - 409
Target Start/End: Original strand, 46846479 - 46846639
Alignment:
Q  249 aaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattca 347  Q
    ||||||||||||| |||||||| |||| ||| | || ||||||| ||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||    
T  46846479 aaaacaataaaagattggtttttagaaaattga-gagaagtatggttaagtccttcgaatcctccgaagttcttctatggtaatttgcactcctagttca 46846577  T
Q  348 atcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctttaccta 409  Q
    ||||||| |||| |||||| |||| ||||||||  | ||||| ||||||||||||| |||||    
T  46846578 atcaatgattatttagtttcacgacagattaacctaataattctacccaatctcttgaccta 46846639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 208 - 403
Target Start/End: Original strand, 23313384 - 23313581
Alignment:
Q  208 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttg 304  Q
    ||||||||| |||||| |||  |||||||||||||||| |   |||||||||||||  ||||||| |||| |||| ||| ||||||| ||||||||||||    
T  23313384 tgccctaggtagttgaattgatttttgtaacataaacgaattaaaaacaataaaagaatggtttt-agaaaattagagagaagtatggttaagacctttg 23313482  T
Q  305 aatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 403  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||| ||||| |||||||| || || | | |||||||  |||| | |||||||||||||    
T  23313483 aatcctccgaagttctcctatggtaatttgcactactaattcaaacaatgattatctaggttcacaacatattaacactgtaactctacccaatctctt 23313581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 181 - 409
Target Start/End: Original strand, 36222406 - 36222635
Alignment:
Q  181 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatat 277  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||| |||| ||||||||||  |   |||||||  |||| |||||||| |||| ||    
T  36222406 aaaaaggatgtataaaatttatattggt-gccctaggcagttgagttgattttctaacataaactgattaaaaacaaagaaagattggtttttagaagat 36222504  T
Q  278 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 377  Q
    | | || ||||||| ||||| |||| ||||||| ||||||||| |||||||||||| |||||||| ||||||||||| |||| |||||| || | | |||    
T  36222505 tga-gagaagtatggttaagtccttcgaatcctccgaagttctcctatggtaattttcactcctagttcaatcaatgattatttagtttcactacaaatt 36222603  T
Q  378 aacaaagtaattatacccaatctctttaccta 409  Q
    |||  ||||||| |||| |||||||| |||||    
T  36222604 aacttagtaattttacctaatctcttgaccta 36222635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 409
Target Start/End: Original strand, 3862029 - 3862225
Alignment:
Q  208 tgccctaggcagttgagttg---ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagaccttt 303  Q
    |||||||||||||| | |||   |||||||||||||||  |   ||||||||||||| |||||||||  || |||| ||| ||||||||||||||||||     
T  3862029 tgccctaggcagttcaattgattttttgtaacataaactgattaaaaacaataaaagattggttttataaa-attagagagaagtatgattaagaccttc 3862127  T
Q  304 gaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 403  Q
    ||||||| ||||||||| |||||        ||||||||||||||  |||| |||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  3862128 gaatccttcgaagttctcctatg--------cactcctaattcaagaaatgattatctagttcaacgacagattaacaaagtaattctacccaatctctt 3862219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 181 - 403
Target Start/End: Original strand, 23759706 - 23759930
Alignment:
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttt-aagaatat 277  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| ||||| ||    
T  23759706 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 23759804  T
Q  278 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagat 376  Q
      | || ||||||| ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| ||| | ||||||| |||| |||||| ||||  |||    
T  23759805 cga-gagaagtatggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggat 23759903  T
Q  377 taacaaagtaattatacccaatctctt 403  Q
    ||||  ||||||| |||||||||||||    
T  23759904 taacttagtaattctacccaatctctt 23759930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 181 - 409
Target Start/End: Complemental strand, 33313143 - 33312913
Alignment:
Q  181 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaac-aataaaag-ttggttttaagaata 276  Q
    ||||||||||| |||| ||||||||| | ||||||||||||||||||| |||||||||||||||| || |||||  |||||| | ||||||||| ||| |    
T  33313143 aaaaaggatgtgtaaaatttatattggt-gccctaggcagttgagttgattttgtaacataaacggaattaaaaataataaaggattggtttta-gaaaa 33313046  T
Q  277 ttaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagat 376  Q
    |   ||| ||  ||| ||||| |||| |||||||  |||| ||| ||||||||||||||  ||||||||||||||||| |||| |||||| ||||   ||    
T  33313045 tctgagagaaaaatggttaagtccttcgaatcctctgaagctctcctatggtaatttgctttcctaattcaatcaatgattatttagtttcacgacgaat 33312946  T
Q  377 taacaaagtaattatacccaatctctttaccta 409  Q
    ||||  ||||||| |||||||||| || |||||    
T  33312945 taacttagtaattctacccaatcttttgaccta 33312913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 398
Target Start/End: Complemental strand, 23108106 - 23107917
Alignment:
Q  211 cctaggcagttgagttgtt--ttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttgaat 307  Q
    ||||| ||||||||||| |  |||||||||||||| |   ||||||||||||| ||||||||| ||| |||| ||| || | || |||||||||| ||||    
T  23108106 cctagacagttgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattagagagaaatgtggttaagaccttcgaat 23108008  T
Q  308 cctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaat 398  Q
    | | ||||| ||| ||||||||||||||||||||| ||||| ||||| |||| |||||| || | ||||||||  ||||| | ||||||||    
T  23108007 catccgaagctctcctatggtaatttgcactcctagttcaaacaatgattatttagtttcacaacagattaacttagtaactctacccaat 23107917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 17857879 - 17857968
Alignment:
Q  81 atgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    |||||||| |||||||||||| ||||||| |||||||| ||||||  || ||||||| ||||||||||||||||||||||||||| ||||    
T  17857879 atgatagatatttggcaagtgtaccaaaagctatcgaaatagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaa 17857968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 38431757 - 38431669
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| |||||| ||||| ||||||| |||||||||||||||  || ||||||| || ||||||||||||||||||||||| |||||    
T  38431757 tgatagatatttggaaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccatgaggaccgttgttaatttctacttagcaa 38431669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 3540932 - 3541011
Alignment:
Q  90 atttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    |||||||||||| |||||||||||| |||||||||  || ||||||| ||||||||||||||| || ||||||| |||||    
T  3540932 atttggcaagtgtaccaaaactatcaaagtagtaataaagttcgtatccacgaggaccgttgtgaacttctacttagcaa 3541011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 6964643 - 6964563
Alignment:
Q  90 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    |||||| ||||| ||||||| |||||||||||||||  || ||||||| ||||||| |||||||||||||||||| |||||    
T  6964643 atttggtaagtgtaccaaaaactatcgaagtagtaatgaagttcgtatccacgagggccgttgttaatttctacttagcaa 6964563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 28577687 - 28577761
Alignment:
Q  91 tttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactca 165  Q
    ||||||||||| |||||||||||||||| | |||  |||||| |||  ||||||||||||||||| |||||||||    
T  28577687 tttggcaagtgtaccaaaactatcgaagcaataatcaaattcatatctacgaggaccgttgttaacttctactca 28577761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 295008 - 294951
Alignment:
Q  181 aaaaaggatgta-taaatttatattgattgccctaggcagttgagttgttttgtaacataa 240  Q
    |||||||||||| ||||||||||||||| |||| |||||||  ||||||||||||||||||    
T  295008 aaaaaggatgtaataaatttatattgat-gcccgaggcagt--agttgttttgtaacataa 294951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 13496232 - 13495906
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 181  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||        ||||    
T  13496232 tgatagagatttgacaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atca 13496134  T
Q  182 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 281  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  13496133 aaaaggatgtataaatttatattgattgtcctaggcagttgaattgttttgtaacataaacgtaaataaaacaataaaagttgattttaagaatattaga 13496034  T
Q  282 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaaca 381  Q
    || ||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| |    
T  13496033 gagaagtatggttaagacctttgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctactttaacgacagattaaga 13495934  T
Q  382 aagtaattatacccaatctctttaccta 409  Q
    ||||||||||| |||||||||| |||||    
T  13495933 aagtaattatatccaatctcttgaccta 13495906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 13493508 - 13493181
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||        |||    
T  13493508 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atc 13493410  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  13493409 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 13493310  T
Q  281 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 380  Q
    ||| ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  13493309 agagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaac 13493210  T
Q  381 aaagtaattatacccaatctctttaccta 409  Q
    ||||||||| ||||||||||||| |||||    
T  13493209 aaagtaattctacccaatctcttgaccta 13493181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 10765165 - 10764838
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||        |||    
T  10765165 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atc 10765067  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  10765066 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 10764967  T
Q  281 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 380  Q
    ||| ||||||| |||||||||| |||||||  |||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  10764966 agagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaacttgcactcctaattcaagcaatgattatctagtttaacgacagattaac 10764867  T
Q  381 aaagtaattatacccaatctctttaccta 409  Q
    ||||||||| ||||||||||||| |||||    
T  10764866 aaagtaattctacccaatctcttgaccta 10764838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 82 - 409
Target Start/End: Original strand, 32505857 - 32506181
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttg----ttaatttctactcagcaannnnnnnn 177  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||  |||||| |||||||||| |||    |||| ||||||||  |||            
T  32505857 tgatagatatttggcaagtgaaccaaaactatcgaagtaataaataagatcgtatccacgaggaccattgcatgttaacttctactcgacaatttcttt- 32505955  T
Q  178 atcaaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatat 277  Q
    |||||||||||||||||||||||||||||| ||   |||||||||     |||| ||||||||||| |   |||||||||||||||||||||||||||||    
T  32505956 atcaaaaaggatgtataaatttatattgat-gcgtgaggcagttg-----ttttctaacataaacgaattaaaaacaataaaagttggttttaagaatat 32506049  T
Q  278 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 377  Q
    || ||| |||| || |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  32506050 tatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagatt 32506149  T
Q  378 aacaaagtaattatacccaatctctttaccta 409  Q
    |||||||||||| ||||||||||||| |||||    
T  32506150 aacaaagtaattctacccaatctcttgaccta 32506181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 39546486 - 39546161
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 181  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||  |||||| |||||||||| ||||||| || ||||||||||        |||     
T  39546486 tgatagagatttggcaagtgaaccaaaattattgaagtaataaataagatcgtat-cacgaggaccattgttaacttttactcagcaatttcatt-atcg 39546389  T
Q  182 aaaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 279  Q
    ||| |||||||| || ||  |||| ||||||||||||||||  |||  ||||||||| |||||| ||||||||||||||||||||||||||| |||||||    
T  39546388 aaa-ggatgtattaaattcaattg-ttgccctaggcagttggattggtttttgtaacgtaaacgcaaataaaacaataaaagttggttttaaaaatatta 39546291  T
Q  280 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaa 379  Q
     ||| ||||||| |||||||||| ||||||| |||||||||  |||||||||||||||||||||||||| ||||| ||||||||||| |||| |||||||    
T  39546290 gagagaagtatggttaagaccttcgaatcctccgaagttctcatatggtaatttgcactcctaattcaagcaatgattatctagtttcacgacagattaa 39546191  T
Q  380 caaagtaattatacccaatctctttaccta 409  Q
    |||||||| | ||||||||||||| |||||    
T  39546190 caaagtaactctacccaatctcttgaccta 39546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 208 - 408
Target Start/End: Complemental strand, 34066466 - 34066264
Alignment:
Q  208 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttg 304  Q
    |||||||||||||||| |||  |||||||||||||||| |   ||||||||||||| ||||||||| ||| |||| ||| ||||||| |||||||||| |    
T  34066466 tgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattagagagaagtatggttaagaccttcg 34066368  T
Q  305 aatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctcttt 404  Q
    |||||| ||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||     
T  34066367 aatcctccgaagttctcctatgataatttgcactcctaattcaatcaatgattatctagtttaacgatagattaacaaagtaattctacccaatctcttg 34066268  T
Q  405 acct 408  Q
    ||||    
T  34066267 acct 34066264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 82 - 403
Target Start/End: Original strand, 16190179 - 16190499
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 181  Q
    |||| |||||||| |||||||| |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| || ||  |||        |  |    
T  16190179 tgatggagatttgacaagtgaatcaaaactatcgaagtaataaataaattcgtatccacgaggactgttgttaatttttattcgacaaaaacgttaaa-a 16190277  T
Q  182 aaaaggatgtataaatttatattgattgccctaggcagttgagttgtt--ttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 279  Q
     ||||||||||| || ||  || |  ||||||||| | |||||||| |  |||||||||||||| |   |||||||||||  ||||||||| ||| ||||    
T  16190278 taaaggatgtattaaattcaatgg--tgccctaggaaattgagttgatgtttgtaacataaacgaattaaaaacaataaagattggtttta-gaaaatta 16190374  T
Q  280 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaa 379  Q
    |||| ||||||| |||||||||| ||||||| ||||||||| ||||| |||||||||||| |||||||| ||||| |||||||||||||||| | |||||    
T  16190375 aagagaagtatggttaagaccttcgaatcctccgaagttctcctatgataatttgcactcttaattcaagcaatgattatctagtttaacgacaaattaa 16190474  T
Q  380 caaagtaat-tatacccaatctctt 403  Q
    |||| |||| |||||||||||||||    
T  16190475 caaaataatatatacccaatctctt 16190499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 27282230 - 27282434
Alignment:
Q  207 ttgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttg 304  Q
    ||||||||||||||||  |||  |||| |||  |||| |||||||||||||| ||| ||||||||| |||||||| ||| ||||||| ||||||| || |    
T  27282230 ttgccctaggcagttggattggtttttataaagtaaatgtaaataaaacaattaaaattggttttatgaatattagagagaagtatggttaagactttcg 27282329  T
Q  305 aatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctcttt 404  Q
    ||| || ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||| |||||  |||||||||||||||| |||||||||||||     
T  27282330 aattctccgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagttcaacgaccgattaacaaagtaattctacccaatctcttg 27282429  T
Q  405 accta 409  Q
    |||||    
T  27282430 accta 27282434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 262 - 403
Target Start/End: Complemental strand, 1936691 - 1936551
Alignment:
Q  262 ttggttttaagaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatct 361  Q
    ||||||||| ||| |||| ||| ||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  1936691 ttggtttta-gaaaattagagagaagtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctagttcaatcaatgattatct 1936593  T
Q  362 agtttaacgatagattaacaaagtaattatacccaatctctt 403  Q
    || || |||| ||||||||||||||| | |||| ||||||||    
T  1936592 agcttcacgaaagattaacaaagtaactctaccaaatctctt 1936551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 276 - 409
Target Start/End: Complemental strand, 15297383 - 15297251
Alignment:
Q  276 attaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgataga 375  Q
    |||||||| || ||||||||||||||| ||||||| ||| ||||||| | |||||||||||| || |||||||||||| || |||||||||||||| |||    
T  15297383 attaaagagaaatatgattaagaccttcgaatcctccgatgttcttccacggtaatttgcacccc-aattcaatcaatattcatctagtttaacgacaga 15297285  T
Q  376 ttaacaaagtaattatacccaatctctttaccta 409  Q
    |||||||||||||| ||||||||||||| |||||    
T  15297284 ttaacaaagtaattctacccaatctcttgaccta 15297251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 295 - 409
Target Start/End: Original strand, 22456705 - 22456818
Alignment:
Q  295 aagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacc 394  Q
    |||||||| ||||||| ||||||||| |||||| |||||| || |||| |||||||||||||  ||||||||||||| ||| ||||||||||||| ||||    
T  22456705 aagaccttcgaatcctccgaagttctcctatggaaatttgtaccccta-ttcaatcaatgttcgtctagtttaacgacagactaacaaagtaattctacc 22456803  T
Q  395 caatctctttaccta 409  Q
    ||||||||| |||||    
T  22456804 caatctcttgaccta 22456818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 295 - 401
Target Start/End: Complemental strand, 49147930 - 49147825
Alignment:
Q  295 aagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacc 394  Q
    |||||||| ||||||| ||||||||| |||||| |||||| || |||| |||||||||||||  ||||||||||||| ||||||||||||||||| ||||    
T  49147930 aagaccttcgaatcctccgaagttctcctatggaaatttgtaccccta-ttcaatcaatgttcgtctagtttaacgacagattaacaaagtaattctacc 49147832  T
Q  395 caatctc 401  Q
    |||||||    
T  49147831 caatctc 49147825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 409
Target Start/End: Complemental strand, 21153295 - 21153174
Alignment:
Q  288 tatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaa 387  Q
    |||| |||||||||| ||||||| ||| | ||||  |||||||||||||| || ||||||||||||||| || ||||||||||| ||||||||| |||||    
T  21153295 tatggttaagaccttcgaatcctccgatgctcttaaatggtaatttgcacccccaattcaatcaatgttcatttagtttaacgacagattaacacagtaa 21153196  T
Q  388 ttatacccaatctctttaccta 409  Q
    || ||| ||||||||| |||||    
T  21153195 ttctactcaatctcttgaccta 21153174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 34552438 - 34552525
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  34552438 tgatagatatttgacaagtgtaccaaaactatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 34552525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 18392747 - 18392669
Alignment:
Q  92 ttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    |||||||||| ||||||| |||||||||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  18392747 ttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 18392669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 15297559 - 15297492
Alignment:
Q  95 gcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctac 162  Q
    ||||||| |||||||||||||||||||||||| ||||| ||| |||| ||||||||||||| ||||||    
T  15297559 gcaagtgtaccaaaactatcgaagtagtaaatgaattcatatccacggggaccgttgttaacttctac 15297492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 8435357 - 8435284
Alignment:
Q  208 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 279  Q
    ||||||||||||||||||||  ||||||||||||||| |||  ||||||||||||||||||||| |||| ||||    
T  8435357 tgccctaggcagttgagttgatttttgtaacataaacataataaaaacaataaaagttggtttttagaaaatta 8435284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 49716735 - 49716647
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| | ||| |||||| ||||||| ||||||||||| |||  || ||||||| |||||||||||||||||||||||||| |||||    
T  49716735 tgatagataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 49716647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 49720192 - 49720129
Alignment:
Q  106 aaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||||||||||| |||  || ||||||| |||||||||||||||||||||||||| |||||    
T  49720192 aaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 49720129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 6206237 - 6206164
Alignment:
Q  90 atttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctact 163  Q
    |||| ||||||| || |||| ||||||||||||||  || ||||||| |||||| |||||||||||||||||||    
T  6206237 atttagcaagtgtactaaaattatcgaagtagtaataaagttcgtatccacgagaaccgttgttaatttctact 6206164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 409
Target Start/End: Original strand, 22453415 - 22453462
Alignment:
Q  362 agtttaacgatagattaacaaagtaattatacccaatctctttaccta 409  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||||    
T  22453415 agtttaacgacagattaacaaagtaattctacccaatctcttgaccta 22453462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 409
Target Start/End: Original strand, 23990362 - 23990415
Alignment:
Q  356 ttatctagtttaacgatagattaacaaagtaattatacccaatctctttaccta 409  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||| ||| |||||    
T  23990362 ttatctagttcaacgacagattaacaaagtaattctacccaatcacttgaccta 23990415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 50196723 - 50196803
Alignment:
Q  90 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    |||||||||||| ||||||| |||| |||||| |||  ||||| |||| ||||||||||||||||||| || ||| |||||    
T  50196723 atttggcaagtgtaccaaaaactattgaagtaataataaaatttgtatccacgaggaccgttgttaatctcaacttagcaa 50196803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 48505904 - 48505937
Alignment:
Q  4 gggtttcaattctcattctattgcatgccaattt 37  Q
    ||||||||||||||||||||||||||| ||||||    
T  48505904 gggtttcaattctcattctattgcatgtcaattt 48505937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 14790864 - 14790537
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||        |||    
T  14790864 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atc 14790766  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  14790765 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 14790666  T
Q  281 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 380  Q
    ||| ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  14790665 agagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaac 14790566  T
Q  381 aaagtaattatacccaatctctttaccta 409  Q
    ||||||||| ||||||||||||| |||||    
T  14790565 aaagtaattctacccaatctcttgaccta 14790537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 14795892 - 14795565
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||   |||||||||||||||||||||||||| ||||        |||    
T  14795892 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtacctacgaggaccgttgttaatttctactcggcaatttcttt-atc 14795794  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  14795793 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattag 14795694  T
Q  281 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 380  Q
    ||| ||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  14795693 agagaagtatggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaac 14795594  T
Q  381 aaagtaattatacccaatctctttaccta 409  Q
    ||||||||| ||||||||||||| |||||    
T  14795593 aaagtaattctacccaatctcttgaccta 14795565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 78 - 409
Target Start/End: Complemental strand, 1838724 - 1838393
Alignment:
Q  78 ctaatgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnn 177  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||||            
T  1838724 ctaatgatagagatttggcaagtgaaccaaaattatcgaagtaataaataaattcgtatccacaaggaccgttgttaatttctactcggcaatttcttt- 1838626  T
Q  178 atcaaaaaggatgtataaatttatattgattgc-cctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaa 274  Q
    |||||||||||||||||||||||||||||||   ||||| ||||||  |||  |||| |||  ||||||||| ||||| |||||||||||||||||||||    
T  1838625 atcaaaaaggatgtataaatttatattgatttttcctagacagttggattggtttttataaagtaaacgtaa-taaaagaataaaagttggttttaagaa 1838527  T
Q  275 tattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatag 374  Q
    ||||| ||| ||||||| |||||||||| ||||||| ||||||||| |||| |||||| ||||||||| ||||||||| | |||| ||||| ||||| ||    
T  1838526 tattagagagaagtatggttaagaccttcgaatcctccgaagttctcctat-gtaattcgcactcctagttcaatcaacgattatttagttcaacgacag 1838428  T
Q  375 attaacaaagtaattatacccaatctctttaccta 409  Q
    ||||||||||||| | ||||||||||||| |||||    
T  1838427 attaacaaagtaactctacccaatctcttgaccta 1838393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 83 - 409
Target Start/End: Original strand, 19664667 - 19664991
Alignment:
Q  83 gatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaa 182  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| ||||||||||| |||        |||||    
T  19664667 gataaagatttggcaagtgaaccaaaactatcgaagtaataaataaatttgtatccacgaggaccgttgtttatttctactcaacaatttcttt-atcaa 19664765  T
Q  183 aaaggatgtataaatttatattgattgccctaggcagttgagttgtt--ttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 280  Q
    ||||||||||| || ||  |  | ||||||||||||||||  ||| |  |||||| ||||||| |   ||||||||||||||| | |||||||| ||||     
T  19664766 aaaggatgtattaaattcaa--ggttgccctaggcagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggtttaagaaaattag 19664863  T
Q  281 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 380  Q
    ||| | ||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||||    
T  19664864 agagatgtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctag-ttcacgacagattaac 19664962  T
Q  381 aaagtaattatacccaatctctttaccta 409  Q
    ||||||| | |||||||| |||| |||||    
T  19664963 aaagtaactctacccaatatcttgaccta 19664991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 226 - 403
Target Start/End: Original strand, 32704398 - 32704575
Alignment:
Q  226 tgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctat 325  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| |||||||||| |||||||  |||||||| ||||    
T  32704398 tgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctat 32704497  T
Q  326 ggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 403  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  32704498 ggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacagagtaattctacccaatctctt 32704575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 20527285 - 20527490
Alignment:
Q  207 ttgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaa-caataaaagttggttttaagaatattaaagataagtatgattaagaccttt 303  Q
    ||||||||||||||||| |||  ||||||||| ||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||||     
T  20527285 ttgccctaggcagttgaattgatttttgtaacgtaaacataaataaaaacaataaaagttggttttaagaatattagagagaagtatggttaagaccttc 20527384  T
Q  304 gaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 403  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||  || |||| ||||||||||| ||| | |||||||||||||    
T  20527385 gaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctaacttcacgacagattaacaaattaactttacccaatctctt 20527484  T
Q  404 taccta 409  Q
     |||||    
T  20527485 gaccta 20527490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 15535300 - 15534975
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 181  Q
    |||| ||||||| ||| ||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| |        || |    
T  15535300 tgatggagatttcgcatgtgaaccaaaattatcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcagccatttcttt-ataa 15535202  T
Q  182 aaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaa 280  Q
    |||||||||||| || ||  |  | ||||||||||||||||||||| |||||||| | |||   |   ||||||||||||||| | ||| | || |||||    
T  15535201 aaaaggatgtattaaattcaa--ggttgccctaggcagttgagttgattttgtaaaacaaatagattaaaaacaataaaagtttggttttacaaaattaa 15535104  T
Q  281 agataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 380  Q
    ||  | ||||| ||||||||||  |||||| ||||||| | ||||||||||||||| ||||||||||||||||| |||||||||| ||||| ||||||||    
T  15535103 agtgatgtatggttaagaccttcaaatcctccgaagttttcctatggtaatttgcattcctaattcaatcaatgattatctagttcaacgacagattaac 15535004  T
Q  381 aaagtaattatacccaatctctttaccta 409  Q
    ||||||| | || |||||||||| |||||    
T  15535003 aaagtaactctaaccaatctcttgaccta 15534975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 81 - 353
Target Start/End: Complemental strand, 27649347 - 27649077
Alignment:
Q  81 atgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||  ||| || |||||||||||||||||||| |||||||||||         ||    
T  27649347 atgatagagatttggcaagtgaactaaaactatcgaagtaataaataagatcgaatccacgaggaccgttgttaattcctactcagcaatttctttc-tc 27649249  T
Q  181 aaaaaggatgtat-aaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatat 277  Q
     ||| ||||| || ||||||   ||| | ||||||||||||||  |||  |||| ||||||||||||| || ||||||||||||||||||||||||| ||    
T  27649248 gaaa-ggatgcattaaattt---ttggtcgccctaggcagttggattggtttttataacataaacgtagatgaaacaataaaagttggttttaagaaaat 27649153  T
Q  278 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaat 353  Q
    || ||  ||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||| ||||    
T  27649152 tagagcgaagtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcacttctaattcaagcaat 27649077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 82 - 348
Target Start/End: Complemental strand, 32427544 - 32427281
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 181  Q
    ||||||| |||||| |||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||| |||||||||||||        ||||    
T  32427544 tgatagatatttggtaagtgaaccaaaactatcgaagtaataaataaatttgtatctacgaggaccgttgttaa-ttctactcagcaa-tttctttatca 32427447  T
Q  182 aaaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 279  Q
    |||| ||||||| || ||  |  | |||||||| |||||||  |||   ||||||| ||||||| |   |||||||| |||||| | ||| |||| ||||    
T  32427446 aaaaagatgtattaaattcaa--ggttgcccta-gcagttggattggtatttgtaaaataaacgaattaaaaacaatgaaagtttggttttagaaaatta 32427350  T
Q  280 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaa 348  Q
     ||| | || |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  32427349 gagagatgtttgattaagacctttgaatcctctgaagttctcctatggtaatttgcactcctaattcaa 32427281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 210 - 409
Target Start/End: Complemental strand, 16883795 - 16883594
Alignment:
Q  210 ccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttgaa 306  Q
    |||||||||||||| |||  |||||||||||||||| |   ||||||||||||| ||||||||| ||| |||| ||| ||||||| ||||||| || |||    
T  16883795 ccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggtttta-gaaaattagagagaagtatggttaagacattcgaa 16883697  T
Q  307 tcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctttac 406  Q
    |||| ||||||||| ||||||||||||||||| ||||||||| ||||| |||||||  || |||| ||||||||| | |||   ||||||||||||| ||    
T  16883696 tccttcgaagttctcctatggtaatttgcactactaattcaaacaatgattatctatgttcacgaaagattaacacaataaccctacccaatctcttgac 16883597  T
Q  407 cta 409  Q
    |||    
T  16883596 cta 16883594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 181 - 409
Target Start/End: Original strand, 13017287 - 13017517
Alignment:
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttta-agaatat 277  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | ||||||||  |||| ||    
T  13017287 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttcagaaaat 13017385  T
Q  278 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagat 376  Q
    | | || ||||||| ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| |||   ||||||| |||| |||||| ||||  |||    
T  13017386 tga-gagaagtatggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatatgatcaatgattatttagtttcacgacggat 13017484  T
Q  377 taacaaagtaattatacccaatctctttaccta 409  Q
    ||||  ||||||| ||||||||||||| |||||    
T  13017485 taacttagtaattctacccaatctcttgaccta 13017517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 295 - 409
Target Start/End: Original strand, 12980705 - 12980818
Alignment:
Q  295 aagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacc 394  Q
    |||||||| ||||||| ||||||||| |||||  |||||| || |||| |||||||||||||  ||||||||||||| ||||||||||||||||| ||||    
T  12980705 aagaccttcgaatcctccgaagttctcctatgaaaatttgtaccccta-ttcaatcaatgttcgtctagtttaacgacagattaacaaagtaattctacc 12980803  T
Q  395 caatctctttaccta 409  Q
    ||||||||| |||||    
T  12980804 caatctcttgaccta 12980818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 22221967 - 22221642
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||| | |||||||||  |  |||  ||||||| |||||        ||     
T  22221967 tgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaa-taaattcgtttccacgaggactatatttagcttctactaagcaatttcatt-att 22221870  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttaagaatat 277  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||||| ||| ||||  ||||| ||| ||||| ||||||| | |||||||| |||| ||    
T  22221869 aaaaaggatgtataaattattattggt-gccctaggcagttgagttgatttagtaa--taaac-taattaaaaacaataaagaattggtttttagaaaat 22221774  T
Q  278 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagat 376  Q
    | | || ||| ||| ||||| |||| ||||||| ||||| ||| |||||||||||||||||| | ||| ||||||||| |||| |||| | ||||  |||    
T  22221773 tga-gagaagcatggttaagtccttcgaatcctccgaagctctcctatggtaatttgcactcttaaatacaatcaatgattatttagtatcacgacggat 22221675  T
Q  377 taacaaagtaattatacccaatctctttaccta 409  Q
    ||||  ||||||| ||||||||||||| |||||    
T  22221674 taacttagtaattctacccaatctcttgaccta 22221642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 22247802 - 22247477
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||| | |||||||||  |  |||  ||||||| |||||        ||     
T  22247802 tgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaa-taaattcgtttccacgaggactatatttagcttctactaagcaatttcatt-att 22247705  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttaagaatat 277  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||||| ||| ||||  ||||| ||| ||||| ||||||| | |||||||| |||| ||    
T  22247704 aaaaaggatgtataaattattattggt-gccctaggcagttgagttgatttagtaa--taaac-taattaaaaacaataaagaattggtttttagaaaat 22247609  T
Q  278 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagat 376  Q
    | | || ||| ||| ||||| |||| ||||||| ||||| ||| |||||||||||||||||| | ||| ||||||||| |||| |||| | ||||  |||    
T  22247608 tga-gagaagcatggttaagtccttcgaatcctccgaagctctcctatggtaatttgcactcttaaatacaatcaatgattatttagtatcacgacggat 22247510  T
Q  377 taacaaagtaattatacccaatctctttaccta 409  Q
    ||||  ||||||| ||||||||||||| |||||    
T  22247509 taacttagtaattctacccaatctcttgaccta 22247477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 193 - 409
Target Start/End: Original strand, 30978321 - 30978539
Alignment:
Q  193 taaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttt-aagaatattaaagataagta 289  Q
    ||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| ||||| ||| | || |||||    
T  30978321 taaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattga-gagaagta 30978418  T
Q  290 tgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagattaacaaagtaat 388  Q
    || ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| ||| | ||||||| |||| |||||| ||||  |||||||  ||||||    
T  30978419 tggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggattaacttagtaat 30978518  T
Q  389 tatacccaatctctttaccta 409  Q
    | ||||||||||||| |||||    
T  30978519 tctacccaatctcttgaccta 30978539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 320
Target Start/End: Complemental strand, 15540809 - 15540578
Alignment:
Q  87 gagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaaaaag 186  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||  ||   ||||| ||||||| |||||||||||||        |||||||||    
T  15540809 gagatttggcaagtgaaccaaaactatcgaagtaataaataaatttgtaaccaatcggaccattgttaacttctactcagcaa-tttctatatcaaaaag 15540711  T
Q  187 gatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagata 285  Q
    ||||||| || ||  |  | || |||||||||||||||||| |||| ||| ||||| | |   |||||||||||||||   ||| |||| |||||||| |    
T  15540710 gatgtattaaattcaa--ggtttccctaggcagttgagttgattttctaaaataaagggattaaaaacaataaaagtttagttttagaaaattaaagaga 15540613  T
Q  286 agtatgattaagacctttgaatcctacgaagttct 320  Q
      |||| |||||||||| ||||||| |||||||||    
T  15540612 tttatggttaagaccttcgaatcctccgaagttct 15540578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 409
Target Start/End: Original strand, 7769594 - 7769715
Alignment:
Q  288 tatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaa 387  Q
    |||| |||||||||| ||||||| ||| | |||| ||||||||||||||| |  ||||||||||||||| || ||||||||||| | |||||||||||||    
T  7769594 tatggttaagaccttcgaatcctccgatgctcttatatggtaatttgcaccctcaattcaatcaatgttcatttagtttaacgacatattaacaaagtaa 7769693  T
Q  388 ttatacccaatctctttaccta 409  Q
    || ||| |||||| || |||||    
T  7769694 ttctactcaatcttttgaccta 7769715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 295 - 408
Target Start/End: Original strand, 12983592 - 12983704
Alignment:
Q  295 aagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacc 394  Q
    |||||||| ||||||| ||||||||| |||||  ||| || || |||| |||||||||||||  ||||||||||||| ||||||||||||||||| ||||    
T  12983592 aagaccttcgaatcctccgaagttctcctatgaaaatctgtaccccta-ttcaatcaatgttcgtctagtttaacgacagattaacaaagtaattctacc 12983690  T
Q  395 caatctctttacct 408  Q
    ||||||||| ||||    
T  12983691 caatctcttgacct 12983704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 11183962 - 11184033
Alignment:
Q  210 ccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 279  Q
    ||||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||||| |||| ||||    
T  11183962 ccctaggcagttgagttgatttttgtaacataaacgtaataaaaacaataaaagttggtttttagaaaatta 11184033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 33678939 - 33679025
Alignment:
Q  80 aatgatagagatttggcaagtgaaccaaaa---ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctact 163  Q
    ||||||| | |||||||||||| |||||||   ||||||||||||||   || ||| ||| ||||||||||||||||||||||||||    
T  33678939 aatgataaatatttggcaagtgtaccaaaaaaactatcgaagtagtactaaagttcatatccacgaggaccgttgttaatttctact 33679025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 387
Target Start/End: Complemental strand, 15540579 - 15540529
Alignment:
Q  337 ctcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaa 387  Q
    ||||||||| |||||||| |||||||||| ||||| |||||||||||||||    
T  15540579 ctcctaatttaatcaatgattatctagttcaacgacagattaacaaagtaa 15540529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 11411127 - 11411039
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| | ||| |||||| ||||||| ||||||||||| |||  || ||||||| |||||| ||| ||||||||||||||| |||||    
T  11411127 tgatagataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgagtaccattgttaatttctacttagcaa 11411039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 12747173 - 12747086
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| ||||| |||||| ||||||| |||||||||||||||  || ||||||| ||| ||||| ||| | ||||||||||| ||||    
T  12747173 tgatagatatttgacaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggactgtt-tcaatttctactcggcaa 12747086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 34502688 - 34502636
Alignment:
Q  95 gcaagtgaaccaaaactatcgaagtagt-aaataaattcgtattcacgaggac 146  Q
    ||||||| || ||||||||||||||||| |||||| ||||||| |||||||||    
T  34502688 gcaagtgtactaaaactatcgaagtagtaaaataagttcgtatccacgaggac 34502636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 196; Significance: 1e-106; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 90 - 409
Target Start/End: Original strand, 647211 - 647530
Alignment:
Q  90 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaaaaagga 188  Q
    |||||||||||| ||||||| |||||||||||||||  || || |||| ||||||||||||||||||||||||||| ||||        |||||||||||    
T  647211 atttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttcttt-atcaaaaagga 647309  T
Q  189 tgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagt 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  647310 tgtataaatttatattgattgccctaggcatttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcagaatattagagagaagt 647409  T
Q  289 atgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaat 388  Q
    ||| |||||| ||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  647410 atggttaagatcttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagtaat 647509  T
Q  389 tatacccaatctctttaccta 409  Q
    | ||||||||||||| |||||    
T  647510 tctacccaatctcttgaccta 647530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 90 - 409
Target Start/End: Original strand, 650483 - 650802
Alignment:
Q  90 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaaaaagga 188  Q
    |||||||||||| ||||||| |||||||||||||||  || || |||| ||||||||||||||||||||||||||| ||||        |||||||||||    
T  650483 atttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttctat-atcaaaaagga 650581  T
Q  189 tgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagt 288  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||    
T  650582 tgtataaatttatattgattgccctaggcatttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttcataatattagagagaagt 650681  T
Q  289 atgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaat 388  Q
    ||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  650682 atggttaagaccttcgaatcctctgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagtttaacgacagattaacaaagtaat 650781  T
Q  389 tatacccaatctctttaccta 409  Q
    | ||||||||||||| |||||    
T  650782 tctacccaatctcttgaccta 650802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 82 - 409
Target Start/End: Original strand, 26062690 - 26063020
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggacc--gttgttaatttctactcagcaannnnnnnnat 179  Q
    ||||| |||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||  |||||||| ||||||||| |||        ||    
T  26062690 tgataaagatttggcaagtgaaccaaaactatcgaaataataaataaattcgtatccacgaggaccccgttgttaacttctactcaacaatttcttt-at 26062788  T
Q  180 caaaaaggatgtataaatttatattgattgccctaggcagttgagttgtt--ttgtaacataaacgtaaataaaacaataaaagttggttttaagaatat 277  Q
    |||||||||||||| || ||  |  | |||||||||| |||||  ||| |  |||||| ||||||| |   ||||||||||||||| | ||| |||| ||    
T  26062789 caaaaaggatgtattaaattcaa--ggttgccctaggtagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaat 26062886  T
Q  278 taaagataa--gtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgataga 375  Q
    || ||| |   ||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| |||    
T  26062887 tagagagagatgtatggttaagacctttgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctagttcaacgacaga 26062986  T
Q  376 ttaacaaagtaattatacccaatctctttaccta 409  Q
    |||||||||||| | ||||||||||||| |||||    
T  26062987 ttaacaaagtaactctacccaatctcttgaccta 26063020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 293 - 409
Target Start/End: Complemental strand, 26060622 - 26060506
Alignment:
Q  293 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattata 392  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||| ||  ||||||||||||||||||| | ||    
T  26060622 ttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaagcaatgattatctagcttcccgatagattaacaaagtaactcta 26060523  T
Q  393 cccaatctctttaccta 409  Q
    ||||||||||| |||||    
T  26060522 cccaatctcttgaccta 26060506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 2542128 - 2541803
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||| ||||||  | ||||||||| ||||||| ||||||| ||||||||| ||  |||| ||||||| |||||        ||     
T  2542128 tgatagatatttggcaagtgtaccaaagtcaatcgaagtaataaataa-ttcgtatccacgaggactgtatttaacttctactgagcaatttcatt-att 2542031  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgttt--tgtaacataaacgtaaataaaacaataaaagtt-ggttttaagaatat 277  Q
    ||||||||||||| || ||  || |  |||||||||||||||||||  ||  ||||||||||||| |   ||||||||||||  | ||||||  ||| ||    
T  2542030 aaaaaggatgtattaaattcaatgg--tgccctaggcagttgagtttattcttgtaacataaacggattaaaaacaataaaatataggttttttgaaaat 2541933  T
Q  278 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 377  Q
    ||||||   ||||| |||||||||| |||||||  ||||||||  |||||||||||| ||||||| ||||| ||||| |||||||||| ||||| |||||    
T  2541932 taaagag--gtatggttaagaccttcgaatcctctgaagttctcttatggtaatttgtactcctatttcaagcaatgattatctagttaaacgacagatt 2541835  T
Q  378 aacaaagtaattatacccaatctctttaccta 409  Q
    |||||||||||| || |||||||||| |||||    
T  2541834 aacaaagtaattttatccaatctcttgaccta 2541803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 15851539 - 15851450
Alignment:
Q  80 aatgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| |||||||||||||| |||||||||||||||||| ||   || ||||||| |||||||||||||||||||||||||| |||||    
T  15851539 aatgataaagatttggcaagtgtaccaaaactatcgaagtaatagtaaagttcgtatccacgaggaccgttgttaatttctacttagcaa 15851450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 12172218 - 12171901
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||||||||||  | ||||||||| |||| ||  |||| | ||||||||| ||  |||| ||||||| |||||        ||     
T  12172218 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaagatcgtttccacgaggactgtatttaacttctacttagcaatttcatt-att 12172120  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttaagaatatt 278  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||  ||||        
T  12172119 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagatttggtttctagaa---- 12172025  T
Q  279 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt-caatcaatgtttatctagtttaacgatagatt 377  Q
            ||||| ||||| |||| ||||| | ||||| ||  |||||||||||||||||||||| | ||||||||| |||| |||||| ||||  ||||    
T  12172024 --------gtatggttaagtccttggaatcttccgaagctcgcctatggtaatttgcactcctaaatacaatcaatgattatttagtttcacgacggatt 12171933  T
Q  378 aacaaagtaattatacccaatctctttaccta 409  Q
    |||  ||||||| ||||||||||||| |||||    
T  12171932 aacttagtaattctacccaatctcttgaccta 12171901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 19929242 - 19929155
Alignment:
Q  82 tgatagagatttggcaagtgaaccaa-aactatcgaagtagtaaataaat-tcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||| ||||| |||| | |||||||||||||||||||||||||| |||||    
T  19929242 tgatagatatttggcaagtgtaccaataactatcgaagtagtaa-taaatatcgt-tccacgaggaccgttgttaatttctacttagcaa 19929155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 21217350 - 21217418
Alignment:
Q  97 aagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactca 165  Q
    ||||| || ||||||||| ||||| |||  |||||||||||||||||||||||| ||||||||||||||    
T  21217350 aagtgtactaaaactatcaaagtaataataaaattcgtattcacgaggaccgttattaatttctactca 21217418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 33400075 - 33400163
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||  || ||||||| |||||| |||||||||||||||| || |||||    
T  33400075 tgatagatatttggcaagtgtaccaaaagctatcgaggtagtaataaagttcgtatccacgagaaccgttgttaatttctgcttagcaa 33400163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 11649329 - 11649393
Alignment:
Q  208 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggtttta 270  Q
    ||||||||||||||||||||  |||||||| ||||||| ||  ||||||||||||||||||||||    
T  11649329 tgccctaggcagttgagttgacttttgtaatataaacgaaataaaaacaataaaagttggtttta 11649393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 11649444 - 11649496
Alignment:
Q  293 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt 345  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||||| |||||    
T  11649444 ttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcataatt 11649496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 26060732 - 26060668
Alignment:
Q  208 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggtttta 270  Q
    |||||||||||| |||||||  |||||||| ||||| | ||  ||||||||||||||||||||||    
T  26060732 tgccctaggcaggtgagttgatttttgtaatataaatgaaataaaaacaataaaagttggtttta 26060668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 9e-80; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 82 - 409
Target Start/End: Original strand, 23673345 - 23673671
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 181  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||        ||||    
T  23673345 tgatagagatttggcaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcaacaatttcttt-atca 23673443  T
Q  182 aaaaggatgtataaatttatattgattgccctaggcagttgagttgt--tttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 279  Q
    |||||||||||| || ||  |  | ||||||||||||||||  |||   ||||||| ||||||| |   ||||||||||||||| | ||| |||| ||||    
T  23673444 aaaaggatgtattaaattcaa--ggttgccctaggcagttggattggcatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaatta 23673541  T
Q  280 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaa 379  Q
     ||| | ||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||    
T  23673542 gagagatgtatggttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcctaattcaatcaatgattatctagtttaacgacaaattaa 23673641  T
Q  380 caaagtaattatacccaatctctttaccta 409  Q
    |||||||||| ||||||||||||| |||||    
T  23673642 caaagtaattctacccaatctcttgaccta 23673671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 81 - 409
Target Start/End: Complemental strand, 36327172 - 36326845
Alignment:
Q  81 atgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||        |||    
T  36327172 atgatagatatttggcaagtgaaccaaaactatcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactctgcaatttcttt-atc 36327074  T
Q  181 aaaaaggatgtat-aaatttatattgattgccctaggcagtt-gagttgt-tttgtaacataaacgtaaataaaacaataaaagttggttttaagaatat 277  Q
    ||||| ||||||| ||||| | | |   ||||||||| |||| || | || ||||||| ||||||| |   ||||||||||||||| | ||| |||| ||    
T  36327073 aaaaaagatgtattaaattcaaagt---tgccctaggaagttagattggtatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaat 36326977  T
Q  278 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 377  Q
    || ||| | ||||| |||||||||||||||||| |||||||||  |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  36326976 tagagagatgtatggttaagacctttgaatcctccgaagttctcatatggtaatttgcactcctaattcaagcaatgattatctaatttaacgatagatt 36326877  T
Q  378 aacaaagtaattatacccaatctctttaccta 409  Q
    |||||||||||| ||||||||||||| |||||    
T  36326876 aacaaagtaattctacccaatctcttgaccta 36326845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 80 - 409
Target Start/End: Complemental strand, 16295145 - 16294817
Alignment:
Q  80 aatgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnat 179  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  ||  || ||||||||||||||||||||||||||||||||        ||    
T  16295145 aatgatagagatttggcaagtgaaccaaaactatcgaagtaataaataagatcaaatccacgaggaccgttgttaatttctactcagcaa-tttcgttat 16295047  T
Q  180 caaaaaggatgtat-aaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaac-aataaaagttggttttaagaata 276  Q
    |  ||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| |||||||  |   ||||| ||||||  || ||||| |||| |    
T  16295046 c-gaaaggatgtataaaatttatattga-tgccctaggcagttgagttgattttgtatcataaaccgattaaaaacaaataaagattagttttcagaaaa 16294949  T
Q  277 ttaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagat 376  Q
    ||  ||| ||||||| ||||| |||| ||||||| ||||||||| ||||||||||||||||||||| || |||||||| |||| |||||| |||| ||||    
T  16294948 tt-gagagaagtatggttaagtccttcgaatcctccgaagttctcctatggtaatttgcactcctagtttaatcaatgattatttagtttcacgacagat 16294850  T
Q  377 taacaaagtaattatacccaatctctttaccta 409  Q
    ||||  ||||||| ||||||||||||| |||||    
T  16294849 taacttagtaattctacccaatctcttgaccta 16294817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 82 - 409
Target Start/End: Original strand, 32575685 - 32576013
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 181  Q
    ||||||| |||||||||||||||||| ||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| | |        || |    
T  32575685 tgatagatatttggcaagtgaaccaacactattgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcaacgatttcgtt-ataa 32575783  T
Q  182 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttg-taacataaacgtaaataaaacaataaaagttggttttaagaatattaa 280  Q
     ||| ||||||| || ||  |||| || |||||||||||||  |||||||  |||  ||||||||||||||||||||||||||||||||||||||||||     
T  32575784 taaatgatgtattaaattcaattg-ttaccctaggcagttggattgtttttataaagtaaacgtaaataaaacaataaaagttggttttaagaatattag 32575882  T
Q  281 agata--agtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatta 378  Q
    ||| |  |||||| |||||||||| ||||||| ||||| ||| ||||| ||||||||||||||| |||||  |||| |||| |||||| |||| ||||||    
T  32575883 agaaagaagtatggttaagaccttcgaatcctccgaagctctcctatgataatttgcactcctagttcaaaaaatgattatttagtttcacgacagatta 32575982  T
Q  379 acaaagtaattatacccaatctctttaccta 409  Q
    ||  ||||| | |||| |||| ||| |||||    
T  32575983 acttagtaactctaccaaatcccttgaccta 32576013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 181 - 359
Target Start/End: Complemental strand, 40018126 - 40017948
Alignment:
Q  181 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 279  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| |   |||||||||| ||   | |||||||| | |     
T  40018126 aaaaaggatgtataaaatttatattgat-gccctaggcagttgagttgatttgtaacataaacggattaaaaacaataagagactggtttaagaaaaatt 40018028  T
Q  280 aagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttat 359  Q
     ||| ||||||| |||||||||| ||||||| ||||  ||| ||||||||||||||||||||||||||| ||||| ||||    
T  40018027 gagagaagtatggttaagaccttcgaatcctccgaaactctcctatggtaatttgcactcctaattcaaccaatgattat 40017948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 181 - 409
Target Start/End: Complemental strand, 31626698 - 31626468
Alignment:
Q  181 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaac-aataaaag-ttggttttaagaata 276  Q
    ||||||||||| |||| ||||||||| | ||||||||||||||||||| |||||||||||||| | || |||||  |||||| | ||||||||| ||| |    
T  31626698 aaaaaggatgtgtaaaatttatattggt-gccctaggcagttgagttgattttgtaacataaaaggaattaaaaataataaaggattggtttta-gaaaa 31626601  T
Q  277 ttaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagat 376  Q
    |   ||| ||| ||| ||||| | || ||||||| ||||| ||| ||||||||||||||||||||||||||||||||  |||| |||||| |||| ||||    
T  31626600 tctgagagaagaatggttaagtcattcgaatcctccgaagctctcctatggtaatttgcactcctaattcaatcaattattatttagtttcacgacagat 31626501  T
Q  377 taacaaagtaattatacccaatctctttaccta 409  Q
    ||||  ||||||| ||||||||||||| |||||    
T  31626500 taacttagtaattctacccaatctcttgaccta 31626468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 31528635 - 31528307
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||||||||||  | ||||||||| |||| ||||| || | ||||||||| ||  |||| ||||||| |||||        ||     
T  31528635 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaatttgtttccacgaggactgtatttaacttctacttagcaatttcatt-att 31528538  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggtttt-aagaatat 277  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| ||||| ||    
T  31528537 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 31528439  T
Q  278 taaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt-caatcaatgtttatctagtttaacgatagat 376  Q
    | | || ||||||| ||||| |||| |||||||   ||| ||| || ||||||||||||||||||| | | ||||||| |||| |||||| |||| ||||    
T  31528438 tga-gagaagtatggttaagtccttcgaatcctctaaagctctcctgtggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacagat 31528340  T
Q  377 taacaaagtaattatacccaatctctttaccta 409  Q
    ||||  ||||||| ||||||||||||| |||||    
T  31528339 taacttagtaattctacccaatctcttgaccta 31528307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 181 - 403
Target Start/End: Complemental strand, 13710218 - 13709995
Alignment:
Q  181 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatatt 278  Q
    |||||||||||||||| ||||||||||| |||  ||| ||||||||||  |||||||||||||| |   ||||||||||||| ||||||||| ||| |||    
T  13710218 aaaaaggatgtataaaatttatattgat-gcctgaggaagttgagttgagttgtaacataaacggattaaaaacaataaaagattggtttta-gaaaatt 13710121  T
Q  279 aaagataagtatgattaagacctttgaatcctacgaa-gttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatt 377  Q
      ||| ||||||| ||||||||||  |||| |  ||| | ||| ||||| |||||||||||||||||| |  ||||| |||||||||| ||| | |||||    
T  13710120 tgagagaagtatggttaagaccttcaaatcatctgaaagctctcctatgataatttgcactcctaatttaggcaatgattatctagttcaacaacagatt 13710021  T
Q  378 aacaaagtaattatacccaatctctt 403  Q
    |||||||||||| ||||| |||||||    
T  13710020 aacaaagtaattctacccgatctctt 13709995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 24384925 - 24385014
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaa--taaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||  ||||||||||||||||| ||| ||| |||||||||||| |||||    
T  24384925 tgatagatatttggcaagtgtaccaaaactatcgaagtaataaaattaaattcgtattcacgatgactgttattaatttctacttagcaa 24385014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 29436088 - 29436025
Alignment:
Q  106 aaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||||||||||| |||  || ||||||| |||||||||||||||||||||||||| |||||    
T  29436088 aaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 29436025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 38315809 - 38315876
Alignment:
Q  90 atttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatt 157  Q
    |||||| ||||| | ||||||||||||||||||||  || ||||||| ||||||||||||||||||||    
T  38315809 atttggtaagtgtatcaaaactatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatt 38315876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 146
Target Start/End: Original strand, 1503204 - 1503256
Alignment:
Q  95 gcaagtgaaccaaaactatcgaagtagtaaa-taaattcgtattcacgaggac 146  Q
    ||||||| || ||||||||||||||| |||| ||||||||||| |||||||||    
T  1503204 gcaagtgtactaaaactatcgaagtaataaaataaattcgtatccacgaggac 1503256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 146
Target Start/End: Original strand, 1506408 - 1506460
Alignment:
Q  95 gcaagtgaaccaaaactatcgaagtagtaaa-taaattcgtattcacgaggac 146  Q
    ||||||| || ||||||||||||||| |||| ||||||||||| |||||||||    
T  1506408 gcaagtgtactaaaactatcgaagtaataaaataaattcgtatccacgaggac 1506460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 409
Target Start/End: Complemental strand, 8427259 - 8427144
Alignment:
Q  293 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattata 392  Q
    ||||||| || ||||| | ||| |||||| | ||||||||||||| |||  |||||||||||| | ||||||||||| | ||||||| ||| |  || ||    
T  8427259 ttaagacattcgaatcatccgatgttcttatttggtaatttgcacccctg-ttcaatcaatgtctttctagtttaacaacagattaataaaatggttcta 8427161  T
Q  393 cccaatctctttaccta 409  Q
    | ||||||||| |||||    
T  8427160 ctcaatctcttgaccta 8427144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 13572070 - 13572118
Alignment:
Q  110 ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaattt 158  Q
    |||||||||||||||  || |||||||  ||||||||||||||||||||    
T  13572070 ctatcgaagtagtaataaagttcgtatctacgaggaccgttgttaattt 13572118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 4e-57; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 82 - 409
Target Start/End: Complemental strand, 13979730 - 13979405
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 181  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||| || ||||||||| | ||||||||||||||||||||        |||     
T  13979730 tgatagagatttggcaagtgaaccaaaactatcgaagtaataaataaaatcgaatccacgaggactgctgttaatttctactcagcaatttcttt-atcg 13979632  T
Q  182 aaaaggatgtataaatttatat-tgattgccctaggcagttgagttgttttg--taacataaacgtaaataaaacaataaaagttggttttaagaatatt 278  Q
    ||| |||||||| ||   |||| || |||||| |||||||||  ||| |||   |||  |||||||||||||||||||||||||||||||||||||||||    
T  13979631 aaa-ggatgtattaa---atatctggttgcccaaggcagttggattggttttaataaagtaaacgtaaataaaacaataaaagttggttttaagaatatt 13979536  T
Q  279 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatta 378  Q
    | ||| ||||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||| | ||||| ||||| |||| |||||| | || ||||||    
T  13979535 agagagaagtatggttaagacctttgaatcctccgaagctctcctatggtaatttgcactccaagttcaaacaatgattatttagtttcatgacagatta 13979436  T
Q  379 acaaagtaattatacccaatctctttaccta 409  Q
    ||  ||||| | || |||||| ||| |||||    
T  13979435 acttagtaactctatccaatcccttgaccta 13979405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 293 - 408
Target Start/End: Complemental strand, 46731529 - 46731414
Alignment:
Q  293 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattata 392  Q
    |||||||||| ||||||| |||||||||  |||||||||||||||||||||||||||||||| |||||||||| ||||| | ||||||||||||| | ||    
T  46731529 ttaagaccttcgaatcctccgaagttctcatatggtaatttgcactcctaattcaatcaatgattatctagttcaacgacatattaacaaagtaactcta 46731430  T
Q  393 cccaatctctttacct 408  Q
    ||||||||||| ||||    
T  46731429 cccaatctcttgacct 46731414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 181 - 409
Target Start/End: Original strand, 39563607 - 39563837
Alignment:
Q  181 aaaaaggatgtataaa-tttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaa-taaaag-ttggttttaagaata 276  Q
    ||||||||||| |||| |||||||| | |||||||||||||||||||| |||||||||||||||  || |||||  | |||||| ||||||||| ||| |    
T  39563607 aaaaaggatgtgtaaaatttatatt-agtgccctaggcagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagattggtttta-gaaaa 39563704  T
Q  277 ttaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagat 376  Q
    |   ||| ||| ||| ||||| |||| ||||||| ||| | ||| ||||| ||||||||||||||||||||||||||| |||| |||||| |||| ||||    
T  39563705 tctgagagaagaatggttaagtccttcgaatcctccgacgctctcctatgataatttgcactcctaattcaatcaatggttatttagtttcacgacagat 39563804  T
Q  377 taacaaagtaattatacccaatctctttaccta 409  Q
    ||||  ||||||| ||||||||||||| |||||    
T  39563805 taacttagtaattctacccaatctcttgaccta 39563837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 46731699 - 46731612
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||||||||||||||||||| ||||||||||||||| | |||||||| |||| |||||||||||||||||| |||||||||||||    
T  46731699 tgatagagatttggcaagtgaacaaaaactatcgaagtaatgaataaatttgtatccacgaggaccgttgttaacttctactcagcaa 46731612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 82 - 409
Target Start/End: Original strand, 22626312 - 22626638
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||||||||||  | ||||||||| |||| || ||||| | ||||||||| ||  |||| ||||||| |||||        ||     
T  22626312 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aagttcgtttccacgaggactgtatttaacttctacttagcaatttcatt-att 22626409  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttaagaatatt 278  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||| |||| ||| |||    
T  22626410 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggattta-gaaaatt 22626507  T
Q  279 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatt 377  Q
     | || ||||||| ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| ||| | ||||||| |||| |||||| ||||  ||||    
T  22626508 ga-gagaagtatggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggatt 22626606  T
Q  378 aacaaagtaattatacccaatctctttaccta 409  Q
    |||  ||||||| || |||||||||| |||||    
T  22626607 aacttagtaattctatccaatctcttgaccta 22626638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 35091834 - 35091912
Alignment:
Q  4 gggtttcaattctcattctattgcatgccaatttctaattgctaattccaatttccttttattataattagaacctaat 82  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  35091834 gggtttcagttctcattctattgcatgtcaatttctaattgctaattccagttcccttttattataattagaacctaat 35091912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 82 - 409
Target Start/End: Original strand, 11138570 - 11138896
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||||||||||  | ||||||||| |||| || ||||| | ||||||||| ||  |||| ||||||| |||||        ||     
T  11138570 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aagttcgtttccacgaggactgtatttaacttctacttagcaatttcatt-att 11138667  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttaagaatatt 278  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||||  |   ||||||||| | | |||| || | ||| |||    
T  11138668 aaaaaggatgtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaatatagaattggattca-gaaaatt 11138765  T
Q  279 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatt 377  Q
     | || ||||||| ||||| |||| ||||||| | ||| ||| |||||||||||||||||||| ||| | ||||||| |||| |||||| ||||  ||||    
T  11138766 ga-gagaagtatggttaagtccttcgaatcctccaaagctctcctatggtaatttgcactcctaaatacgatcaatgattatttagtttcacgacggatt 11138864  T
Q  378 aacaaagtaattatacccaatctctttaccta 409  Q
    |||  ||||||| || |||||||||| |||||    
T  11138865 aacttagtaattctatccaatctcttgaccta 11138896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 409
Target Start/End: Complemental strand, 47412222 - 47412101
Alignment:
Q  288 tatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaa 387  Q
    |||||||||||||||||||||||   | ||||||||| |||||||||||| |  ||||||||||||||| ||||| |||||| | |||||||||   |||    
T  47412222 tatgattaagacctttgaatcctctaatgttcttctacggtaatttgcacccacaattcaatcaatgttcatctaatttaacaacagattaacacgataa 47412123  T
Q  388 ttatacccaatctctttaccta 409  Q
    || ||| ||||||||| |||||    
T  47412122 ttctactcaatctcttgaccta 47412101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 27055237 - 27055149
Alignment:
Q  81 atgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    |||||| | ||||||||||   ||||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  27055237 atgataaatatttggcaagcataccaaaactatcgaagtagtaataaatttcgtatccacgaggaccgttgttaatttctacttagcaa 27055149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 19869343 - 19869255
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| |||||||||||| || |||| ||||| |||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  19869343 tgatagatatttggcaagtgtactaaaatctatcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 19869255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 165
Target Start/End: Original strand, 26822039 - 26822122
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactca 165  Q
    |||||||  ||||| ||||| |||||||||||||||||| |||  |||||||||| ||| ||||||| ||||||||| ||||||    
T  26822039 tgatagacttttggaaagtgtaccaaaactatcgaagtaataataaaattcgtatccacaaggaccgctgttaatttttactca 26822122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 50096902 - 50096829
Alignment:
Q  208 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatatta 279  Q
    ||||||| ||||||||||||  |||||||||||||||||||  |||||| |||||||||||||| |||| ||||    
T  50096902 tgccctaagcagttgagttgatttttgtaacataaacgtaataaaaacagtaaaagttggtttttagaaaatta 50096829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 409
Target Start/End: Complemental strand, 35366387 - 35366295
Alignment:
Q  316 gttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctttaccta 409  Q
    ||||||||| |||||||||||| || ||||||||||||||| || || |||||||| | ||||||||  ||||| ||| ||||||||| |||||    
T  35366387 gttcttctacggtaatttgcacccc-aattcaatcaatgttcatataatttaacgacaaattaacaagataattctactcaatctcttgaccta 35366295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 25492263 - 25492175
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| | ||| |||||| ||||||| ||||| || ||||||  || ||||||| |||||||| ||||||||||||||||| |||||    
T  25492263 tgatagataattgacaagtgtaccaaaagctatcaaaatagtaataaagttcgtatccacgaggatcgttgttaatttctacttagcaa 25492175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 20536459 - 20536520
Alignment:
Q  208 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttt 268  Q
    ||||||||||||||| ||||  || ||||||| |||||||| |||||||||||||||||||||    
T  20536459 tgccctaggcagttgggttgacttgtgtaacacaaacgtaa-taaaacaataaaagttggttt 20536520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 3306213 - 3306147
Alignment:
Q  82 tgatagagatttggcaagtgaaccaa-aactatcgaagtagtaaa-taaattcgtattcacgaggac 146  Q
    ||||||| |||||||||||| ||||| ||||||||||||| |||| ||| ||||||| |||||||||    
T  3306213 tgatagatatttggcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggac 3306147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 30157797 - 30157863
Alignment:
Q  82 tgatagagatttggcaagtgaaccaa-aactatcgaagtagtaaa-taaattcgtattcacgaggac 146  Q
    ||||||| |||||||||||| ||||| ||||||||||||| |||| ||| ||||||| |||||||||    
T  30157797 tgatagaaatttggcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggac 30157863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 32366877 - 32366927
Alignment:
Q  76 acctaatgatagagatttggcaagtgaaccaaa-actatcgaagtagtaaa 125  Q
    |||||||||||||  ||||||||||| |||||| |||||||||||||||||    
T  32366877 acctaatgatagaattttggcaagtgtaccaaatactatcgaagtagtaaa 32366927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 4225619 - 4225659
Alignment:
Q  84 atagagatttggcaagtgaaccaaaactatcgaagtagtaa 124  Q
    ||||| |||||||||||| ||||| ||||||||||||||||    
T  4225619 atagatatttggcaagtgtaccaatactatcgaagtagtaa 4225659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 18883561 - 18883509
Alignment:
Q  95 gcaagtgaaccaaaactatcgaagtagtaaa-taaattcgtattcacgaggac 146  Q
    ||||||| || ||||||||| |||||||||| ||| |||||||||||||||||    
T  18883561 gcaagtgtactaaaactatcaaagtagtaaaataagttcgtattcacgaggac 18883509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 90 - 403
Target Start/End: Original strand, 12575308 - 12575620
Alignment:
Q  90 atttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatcaaaaagga 188  Q
    |||||||||||| ||||||  | ||||||||| ||||||| ||||||| ||||||||| |||||||| ||||||||| |||        || ||||||||    
T  12575308 atttggcaagtgtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggactgttgttaacttctactcaacaagttcatt-attaaaaagga 12575405  T
Q  189 tgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaag-ttggttttaagaatattaaagata 285  Q
    ||||| || ||  || |  ||||||||||||||||||||  ||||||||||||||   |   ||||||||||||| |||||||| |||| |||| ||| |    
T  12575406 tgtattaaattcaatgg--tgccctaggcagttgagttgatttttgtaacataaattgattaaaaacaataaaagattggtttt-agaaaattagagaga 12575502  T
Q  286 agtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagt 385  Q
    |||||| |||||||| ||||||||| ||||||| |  |||||||||||||||||||||||||| ||||| | |||||||||||||| |||||||||||||    
T  12575503 agtatggttaagaccattgaatcctccgaagttttcttatggtaatttgcactcctaattcaagcaatgataatctagtttaacgacagattaacaaagt 12575602  T
Q  386 aattatacccaatctctt 403  Q
    |||| |||| ||||||||    
T  12575603 aattctacctaatctctt 12575620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 82 - 348
Target Start/End: Complemental strand, 14418707 - 14418445
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 181  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||| | | ||| |||||        ||||    
T  14418707 tgatagatttttggcaagtgaaccaaagctatcgaagtagtaaataa-ttcgt-tccacgaggaccgttgttaactacaacttagcaatttcttt-atca 14418611  T
Q  182 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 281  Q
    |||||||| | | || ||  || | ||||||||||||||||||||| ||| ||||||||||  |   ||||||||||||||||||||||||||||||| |    
T  14418610 aaaaggatatgttaaattcaatgg-ttgccctaggcagttgagttggtttttaacataaacaaattaaaaacaataaaagttggttttaagaatattaga 14418512  T
Q  282 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaa 348  Q
    || ||||||| ||||||| || ||||||| |||| |||| ||||| |||||||||||||||||||||    
T  14418511 gagaagtatggttaagacattcgaatcctccgaatttctcctatgataatttgcactcctaattcaa 14418445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 208 - 409
Target Start/End: Original strand, 41778866 - 41779068
Alignment:
Q  208 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaagataagtatgattaagacctttga 305  Q
    |||||||||||||||| |||  |||||||||||||||| |   ||||||||||||| | | |||| ||| |||||||| ||||||| ||||||||||  |    
T  41778866 tgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattgattta-gaagattaaagagaagtatggttaagaccttcaa 41778964  T
Q  306 atcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctcttta 405  Q
    ||| | ||||||||| ||||| |||||||||||  |||||||| ||||| |||||||| || |||| ||||||||| | ||| | ||||||||||||| |    
T  41778965 atcttccgaagttctcctatgctaatttgcactagtaattcaaacaatgattatctaggttcacgacagattaacacaataactctacccaatctcttga 41779064  T
Q  406 ccta 409  Q
    ||||    
T  41779065 ccta 41779068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 249 - 403
Target Start/End: Complemental strand, 13097099 - 13096946
Alignment:
Q  249 aaaacaataaaag-ttggttttaagaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattca 347  Q
    ||||||||||||| || |||||| ||| |||| ||| ||||||| |||||||||| ||||||| ||||||| | ||||| |||||||||||||||||| |    
T  13097099 aaaacaataaaagattagtttta-gaaaattagagagaagtatggttaagaccttcgaatcctccgaagttatcctatg-taatttgcactcctaattta 13097002  T
Q  348 atcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 403  Q
    | ||||| |||||||||| || || ||||||||||||||||| |||||||||||||    
T  13097001 agcaatgattatctagttcaatgaaagattaacaaagtaattctacccaatctctt 13096946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 39659712 - 39659799
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||  || ||||||| |||||||||| ||||||||||||||| |||||    
T  39659712 tgatagatatttggcaagtgtaccgaaactatcgaagtagtaataaagttcgtatccacgaggaccattgttaatttctacttagcaa 39659799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 9467429 - 9467341
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||| ||||||||||||||||||||||| || |||||    
T  9467429 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttcttcttagcaa 9467341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 453951 - 453863
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| ||||| |||||| ||||||| |||| |||||| |||  || ||||||| |||||||||||||||||||||||||| |||||    
T  453951 tgatagatatttgacaagtgtaccaaaaactatggaagtactaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 453863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 41836318 - 41836382
Alignment:
Q  208 tgccctaggcagttgagttg--ttttgtaacataaacgtaaataaaacaataaaagttggtttta 270  Q
    ||||||||||||||||||||  |||||||| ||||||| ||  ||||||||||||||||||||||    
T  41836318 tgccctaggcagttgagttgacttttgtaatataaacgaaataaaaacaataaaagttggtttta 41836382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 41836433 - 41836485
Alignment:
Q  293 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaatt 345  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||||| |||||    
T  41836433 ttaagaccttcgaatcctccgaagttctcctatggtaatttgcactcataatt 41836485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 44008335 - 44008245
Alignment:
Q  288 tatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagatta 378  Q
    |||| ||| |||||| ||||||| ||||| ||  || ||||||| |||||||||| ||||| ||||| |||| |||||| |||||||||||    
T  44008335 tatggttatgaccttcgaatcctccgaagctcgcctttggtaatctgcactcctagttcaaacaatgattatttagtttcacgatagatta 44008245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 13332429 - 13332365
Alignment:
Q  105 caaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||||||||||||||||  || || |||| || |||||||||||||||||| |||| |||||    
T  13332429 caaaactatcgaagtagtaataaagtttgtatccatgaggaccgttgttaatttatacttagcaa 13332365  T

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Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 125
Target Start/End: Original strand, 22173710 - 22173744
Alignment:
Q  91 tttggcaagtgaaccaaaactatcgaagtagtaaa 125  Q
    ||||||||||| |||||||||||||||||||||||    
T  22173710 tttggcaagtgtaccaaaactatcgaagtagtaaa 22173744  T

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Target: scaffold0363 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 82 - 348
Target Start/End: Original strand, 11 - 273
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatca 181  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||| | | ||| |||||        ||||    
T  11 tgatagatttttggcaagtgaaccaaagctatcgaagtagtaaataa-ttcgt-tccacgaggaccgttgttaactacaacttagcaatttcttt-atca 107  T
Q  182 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttttgtaacataaacgtaaataaaacaataaaagttggttttaagaatattaaa 281  Q
    |||||||| | | || ||  || | ||||||||||||||||||||| ||| ||||||||||  |   ||||||||||||||||||||||||||||||| |    
T  108 aaaaggatatgttaaattcaatgg-ttgccctaggcagttgagttggtttttaacataaacaaattaaaaacaataaaagttggttttaagaatattaga 206  T
Q  282 gataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaa 348  Q
    || ||||||| ||||||| || ||||||| |||| |||| ||||| |||||||||||||||||||||    
T  207 gagaagtatggttaagacattcgaatcctccgaatttctcctatgataatttgcactcctaattcaa 273  T

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Target: scaffold0440 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 181 - 409
Target Start/End: Complemental strand, 10010 - 9781
Alignment:
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttaagaatatt 278  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||||||| |||| |||    
T  10010 aaaaaggatgtataaatttatattggtc-ccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaataattggtttttagaaaatt 9912  T
Q  279 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatt 377  Q
     | || ||||||| ||||| |||| ||||||| ||||| ||| |||||| ||||||||||||| ||| ||||||||| |||| |||||| ||||  ||||    
T  9911 ga-gagaagtatggttaagtccttcgaatcctccgaagctctcctatggcaatttgcactcctaaatacaatcaatgattatttagtttcacgacggatt 9813  T
Q  378 aacaaagtaattatacccaatctctttaccta 409  Q
    |||  ||||||| ||||||||||||| |||||    
T  9812 aacttagtaattctacccaatctcttgaccta 9781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 271 - 403
Target Start/End: Original strand, 5999 - 6131
Alignment:
Q  271 agaatattaaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacg 370  Q
    |||| |||| ||| ||||||| |||||||||| ||||||| ||| ||||| ||||||||||||||||| ||||||||| ||||| |||||||| || |||    
T  5999 agaaaattagagagaagtatggttaagaccttcgaatcctccgaggttctcctatggtaatttgcactactaattcaaacaatgattatctaggttcacg 6098  T
Q  371 atagattaacaaagtaattatacccaatctctt 403  Q
    | ||||||||| | ||| | |||||||||||||    
T  6099 acagattaacacaataactctacccaatctctt 6131  T

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Target: scaffold0352 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 293 - 409
Target Start/End: Original strand, 2814 - 2930
Alignment:
Q  293 ttaagacctttgaatcctacgaagttcttctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattata 392  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||||||||| |||| |||||| |||| |||||||   ||||||| ||    
T  2814 ttaagacctttgaatcctccgaagctctcctatggtaatttgcactcctagttcaatcaatgattatatagtttcacgaaagattaaggtagtaattcta 2913  T
Q  393 cccaatctctttaccta 409  Q
    || |||||||| |||||    
T  2914 ccaaatctcttgaccta 2930  T

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Target: scaffold0352; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 2619 - 2706
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||  |||||| |||||||||||||||||| |||||||||||||    
T  2619 tgatggagatttggcaagtggaccaaaactatcgaagtaataaataagatcgtatccacgaggaccgttgttaacttctactcagcaa 2706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 409
Target Start/End: Original strand, 24185 - 24510
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaannnnnnnnatc 180  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||| |||||| || | ||||||||| ||  |||| ||||||||| |||        ||     
T  24185 tgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaa-taaatttgtttccacgaggactgtatttaacttctactcaacaatttcatt-att 24282  T
Q  181 aaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttaagaatatt 278  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||||| ||| ||||  |||||  |   ||||||||||| | |||||||| |||| |||    
T  24283 aaaaaggatgtataaattattattggt-gccctaggcagttgagttgatttagtaa--taaactgattaaaaacaataaagaattggtttttagaaaatt 24379  T
Q  279 aaagataagtatgattaagacctttgaatcctacgaagttcttctatggtaatttgcactcct-aattcaatcaatgtttatctagtttaacgatagatt 377  Q
     | || ||| ||| ||||| |||| ||||||| ||||| ||| |||||||||||||||||||| ||| |||| |||| |||| |||| | ||||  ||||    
T  24380 ga-gagaagcatggttaagtccttcgaatcctccgaagctctcctatggtaatttgcactcctaaatacaataaatgattatttagtatcacgacggatt 24478  T
Q  378 aacaaagtaattatacccaatctctttaccta 409  Q
    |||  ||||||| ||||||||||||| |||||    
T  24479 aacttagtaattctacccaatctcttgaccta 24510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 33730 - 33817
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||| |||||||||||| ||||||||||||||||||||||  || || |||| |||||||||||||||||||||||||| |||||    
T  33730 tgatagatatttggcaagtgtaccaaaactatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaa 33817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 19517 - 19596
Alignment:
Q  90 atttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    |||||||||||| ||||||||| || |||||||||  || ||||||| |||||||||||||||||||||||||| |||||    
T  19517 atttggcaagtgtaccaaaactgtcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 19596  T

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Target: scaffold0063 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 7232 - 7313
Alignment:
Q  322 ctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaacaaagtaattatacccaatctctt 403  Q
    ||||||||||||| ||||||||||||||||||| |||| |||||| |||| ||||||||  ||||||| ||  |||||||||    
T  7232 ctatggtaatttgtactcctaattcaatcaatgattatttagtttcacgacagattaacttagtaattctattcaatctctt 7313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 322 - 380
Target Start/End: Complemental strand, 2699 - 2641
Alignment:
Q  322 ctatggtaatttgcactcctaattcaatcaatgtttatctagtttaacgatagattaac 380  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||| |||| ||||||||    
T  2699 ctatggtaacttgcactcctaattcaatcaatgattatttagtttcacgacagattaac 2641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 3739 - 3664
Alignment:
Q  91 tttggcaagtgaaccaaaactatcgaagtagtaaataaattcgtattcacgaggaccgttgttaatttctactcagcaa 169  Q
    ||||||||||| |||||  ||||||||||| ||||   ||| |||| |||||||||||||||||| |||||||||||||    
T  3739 tttggcaagtgtaccaattctatcgaagtaataaa---atttgtatccacgaggaccgttgttaacttctactcagcaa 3664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 19636 - 19593
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaa 125  Q
    |||||||  ||||||||||| |||||||||||||||||||||||    
T  19636 tgatagatttttggcaagtgtaccaaaactatcgaagtagtaaa 19593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 29715 - 29672
Alignment:
Q  82 tgatagagatttggcaagtgaaccaaaactatcgaagtagtaaa 125  Q
    |||||||  ||||||||||| |||||||||||||||||||||||    
T  29715 tgatagatttttggcaagtgtaccaaaactatcgaagtagtaaa 29672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 125
Target Start/End: Original strand, 14094 - 14128
Alignment:
Q  91 tttggcaagtgaaccaaaactatcgaagtagtaaa 125  Q
    ||||||||||| |||||||||||||||||||||||    
T  14094 tttggcaagtgtaccaaaactatcgaagtagtaaa 14128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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