View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5673_low_2 (Length: 799)

Name: NF5673_low_2
Description: NF5673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5673_low_2
NF5673_low_2
[»] chr5 (59 HSPs)
chr5 (19-185)||(33866957-33867122)
chr5 (195-332)||(22101921-22102058)
chr5 (196-328)||(5002142-5002274)
chr5 (196-320)||(18473489-18473613)
chr5 (196-332)||(21488281-21488417)
chr5 (190-332)||(29299365-29299508)
chr5 (190-331)||(11931977-11932119)
chr5 (584-699)||(33866287-33866400)
chr5 (346-463)||(33866825-33866944)
chr5 (206-332)||(33478131-33478257)
chr5 (196-320)||(18718252-18718377)
chr5 (190-275)||(36434733-36434818)
chr5 (191-325)||(16619026-16619161)
chr5 (215-328)||(36286061-36286174)
chr5 (196-332)||(13789730-13789866)
chr5 (215-331)||(34297173-34297289)
chr5 (184-333)||(15968313-15968461)
chr5 (184-332)||(26327537-26327685)
chr5 (196-333)||(38394442-38394579)
chr5 (184-331)||(22731258-22731404)
chr5 (206-272)||(14723410-14723476)
chr5 (190-332)||(29031035-29031176)
chr5 (218-331)||(919641-919754)
chr5 (184-333)||(27488349-27488497)
chr5 (196-325)||(1138223-1138351)
chr5 (184-269)||(38362381-38362466)
chr5 (206-331)||(10228087-10228216)
chr5 (196-331)||(1015155-1015289)
chr5 (236-333)||(1248883-1248981)
chr5 (196-272)||(14913164-14913240)
chr5 (215-271)||(32452287-32452343)
chr5 (38-102)||(33734541-33734605)
chr5 (38-102)||(33904600-33904664)
chr5 (190-293)||(3814008-3814111)
chr5 (35-98)||(33698705-33698768)
chr5 (196-333)||(13664943-13665073)
chr5 (190-320)||(32902778-32902908)
chr5 (196-253)||(8511460-8511517)
chr5 (196-317)||(12094251-12094371)
chr5 (32-105)||(33680102-33680175)
chr5 (186-332)||(8235382-8235521)
chr5 (19-102)||(33749013-33749096)
chr5 (199-333)||(24173417-24173551)
chr5 (19-84)||(33846626-33846691)
chr5 (460-492)||(33866497-33866529)
chr5 (199-250)||(19211297-19211348)
chr5 (218-272)||(1420715-1420769)
chr5 (197-247)||(7065664-7065714)
chr5 (198-272)||(14338873-14338947)
chr5 (199-332)||(19295955-19296089)
chr5 (190-272)||(21090384-21090466)
chr5 (196-274)||(26313320-26313398)
chr5 (190-244)||(34297182-34297236)
chr5 (197-247)||(35349496-35349546)
chr5 (217-263)||(37322611-37322657)
chr5 (196-269)||(39239808-39239882)
chr5 (184-221)||(1248939-1248976)
chr5 (187-272)||(7749976-7750061)
chr5 (205-274)||(15969091-15969160)
[»] chr4 (63 HSPs)
chr4 (190-331)||(48361060-48361201)
chr4 (190-332)||(36132633-36132775)
chr4 (186-332)||(50121441-50121587)
chr4 (190-335)||(44111740-44111885)
chr4 (196-333)||(25477542-25477679)
chr4 (191-332)||(48195899-48196040)
chr4 (196-332)||(30191910-30192046)
chr4 (190-316)||(41116570-41116695)
chr4 (193-331)||(4386147-4386285)
chr4 (196-332)||(8347659-8347795)
chr4 (190-333)||(3162903-3163046)
chr4 (215-333)||(17284732-17284850)
chr4 (219-328)||(35429775-35429884)
chr4 (184-331)||(47866038-47866184)
chr4 (196-327)||(53658367-53658498)
chr4 (184-332)||(3043794-3043941)
chr4 (187-320)||(43117862-43117997)
chr4 (196-319)||(42670778-42670901)
chr4 (196-333)||(16412248-16412385)
chr4 (184-333)||(42804258-42804406)
chr4 (184-320)||(20459251-20459386)
chr4 (191-275)||(42169098-42169182)
chr4 (228-331)||(9044386-9044489)
chr4 (186-317)||(45828428-45828559)
chr4 (190-328)||(43020764-43020901)
chr4 (217-331)||(45096609-45096723)
chr4 (190-275)||(9894633-9894718)
chr4 (196-316)||(44061402-44061521)
chr4 (190-333)||(20745329-20745471)
chr4 (190-293)||(53225681-53225784)
chr4 (195-273)||(23226963-23227041)
chr4 (196-317)||(21554122-21554242)
chr4 (184-332)||(55190665-55190812)
chr4 (186-321)||(33010678-33010813)
chr4 (197-275)||(14859720-14859798)
chr4 (266-332)||(37991484-37991550)
chr4 (186-332)||(47943731-47943877)
chr4 (184-333)||(20956892-20957040)
chr4 (198-275)||(28020532-28020609)
chr4 (215-316)||(55951676-55951777)
chr4 (191-331)||(31977743-31977885)
chr4 (190-321)||(46434107-46434237)
chr4 (196-274)||(26066383-26066461)
chr4 (218-316)||(32714283-32714381)
chr4 (196-332)||(40780248-40780381)
chr4 (199-275)||(2401053-2401129)
chr4 (190-293)||(696387-696490)
chr4 (190-293)||(764685-764788)
chr4 (190-332)||(30191894-30192036)
chr4 (252-329)||(19150793-19150870)
chr4 (190-275)||(25700461-25700546)
chr4 (196-284)||(2583128-2583216)
chr4 (199-275)||(24100776-24100852)
chr4 (224-272)||(30206526-30206574)
chr4 (190-330)||(53658372-53658512)
chr4 (199-250)||(24100884-24100935)
chr4 (188-270)||(2643614-2643696)
chr4 (190-244)||(19150666-19150720)
chr4 (199-253)||(31853144-31853198)
chr4 (193-247)||(52535962-52536016)
chr4 (199-253)||(52966412-52966466)
chr4 (199-332)||(29686398-29686531)
chr4 (199-332)||(33622878-33623011)
[»] chr1 (47 HSPs)
chr1 (190-326)||(49944841-49944977)
chr1 (196-331)||(519832-519967)
chr1 (190-319)||(38737942-38738071)
chr1 (190-333)||(38040273-38040416)
chr1 (193-320)||(34332487-34332614)
chr1 (190-332)||(26070832-26070974)
chr1 (186-326)||(44939070-44939210)
chr1 (190-332)||(26924221-26924363)
chr1 (202-319)||(15342957-15343074)
chr1 (190-293)||(50155335-50155438)
chr1 (195-321)||(640535-640660)
chr1 (188-315)||(37515105-37515232)
chr1 (190-320)||(47912827-47912954)
chr1 (190-320)||(26760183-26760313)
chr1 (196-284)||(23923564-23923652)
chr1 (191-331)||(24305664-24305804)
chr1 (220-332)||(37178948-37179060)
chr1 (196-277)||(7375522-7375603)
chr1 (217-332)||(5891724-5891839)
chr1 (190-320)||(11386162-11386292)
chr1 (196-272)||(38590124-38590202)
chr1 (184-331)||(43929345-43929491)
chr1 (184-331)||(47678255-47678401)
chr1 (196-333)||(34662696-34662832)
chr1 (190-320)||(6793602-6793732)
chr1 (199-331)||(18744576-18744704)
chr1 (181-331)||(47844533-47844682)
chr1 (217-310)||(6661549-6661642)
chr1 (190-325)||(29256606-29256738)
chr1 (193-331)||(27819310-27819449)
chr1 (196-329)||(8971242-8971375)
chr1 (196-258)||(23923408-23923470)
chr1 (196-293)||(26823151-26823248)
chr1 (195-284)||(47883976-47884065)
chr1 (224-316)||(15286023-15286115)
chr1 (198-316)||(2855099-2855217)
chr1 (213-274)||(10015142-10015203)
chr1 (193-246)||(45848950-45849003)
chr1 (199-287)||(15699481-15699569)
chr1 (214-274)||(20273172-20273232)
chr1 (196-316)||(34146819-34146938)
chr1 (190-257)||(28358995-28359062)
chr1 (199-293)||(20273133-20273227)
chr1 (218-275)||(15351747-15351804)
chr1 (199-332)||(27687839-27687972)
chr1 (193-250)||(39748630-39748687)
chr1 (255-316)||(39748633-39748694)
[»] chr7 (54 HSPs)
chr7 (186-333)||(11668012-11668159)
chr7 (184-312)||(8566099-8566227)
chr7 (196-332)||(28677315-28677451)
chr7 (196-332)||(36245374-36245510)
chr7 (198-332)||(45441434-45441568)
chr7 (193-333)||(10462388-10462527)
chr7 (191-293)||(30869223-30869325)
chr7 (199-331)||(45533247-45533379)
chr7 (194-316)||(9979815-9979936)
chr7 (197-293)||(2610202-2610298)
chr7 (190-332)||(41850604-41850746)
chr7 (200-284)||(34117985-34118069)
chr7 (190-316)||(6838385-6838509)
chr7 (186-320)||(39153297-39153429)
chr7 (184-333)||(27231831-27231979)
chr7 (200-320)||(29365631-29365751)
chr7 (190-333)||(13807250-13807389)
chr7 (191-325)||(48082808-48082941)
chr7 (190-332)||(10007572-10007716)
chr7 (196-332)||(4826776-4826911)
chr7 (196-288)||(4925905-4925997)
chr7 (184-332)||(31227495-31227642)
chr7 (190-293)||(44682574-44682677)
chr7 (184-326)||(1366599-1366740)
chr7 (190-331)||(24163276-24163418)
chr7 (190-332)||(32811376-32811517)
chr7 (186-275)||(32811764-32811853)
chr7 (190-325)||(2523775-2523910)
chr7 (196-316)||(30823723-30823843)
chr7 (196-319)||(2680869-2680993)
chr7 (23-102)||(5470185-5470264)
chr7 (215-316)||(2399966-2400067)
chr7 (217-314)||(48838347-48838444)
chr7 (215-339)||(7456410-7456534)
chr7 (186-250)||(41863661-41863725)
chr7 (190-329)||(28020002-28020139)
chr7 (196-255)||(43174299-43174358)
chr7 (189-284)||(27163207-27163302)
chr7 (191-274)||(39153296-39153379)
chr7 (190-293)||(40142810-40142913)
chr7 (228-293)||(47987196-47987261)
chr7 (190-270)||(12426538-12426618)
chr7 (190-325)||(2610192-2610326)
chr7 (196-275)||(45981022-45981100)
chr7 (187-245)||(16861517-16861575)
chr7 (200-274)||(18064740-18064814)
chr7 (212-254)||(28063684-28063726)
chr7 (199-313)||(41395679-41395793)
chr7 (196-326)||(47942841-47942971)
chr7 (196-326)||(47948271-47948401)
chr7 (200-253)||(19512749-19512802)
chr7 (190-331)||(28677325-28677466)
chr7 (206-275)||(40176091-40176160)
chr7 (200-313)||(45123263-45123376)
[»] chr8 (43 HSPs)
chr8 (190-319)||(5031472-5031601)
chr8 (196-331)||(40483282-40483417)
chr8 (197-332)||(16448787-16448922)
chr8 (190-332)||(42122964-42123108)
chr8 (193-331)||(3236343-3236479)
chr8 (186-320)||(35149678-35149812)
chr8 (190-332)||(7693031-7693173)
chr8 (190-332)||(8803236-8803378)
chr8 (190-331)||(43332568-43332710)
chr8 (196-333)||(10839777-10839913)
chr8 (196-332)||(8793733-8793869)
chr8 (196-332)||(15726758-15726893)
chr8 (190-317)||(16008536-16008663)
chr8 (192-332)||(34711091-34711230)
chr8 (196-325)||(10184555-10184685)
chr8 (190-332)||(44796350-44796491)
chr8 (196-332)||(12958790-12958925)
chr8 (190-293)||(1223131-1223234)
chr8 (184-331)||(6899422-6899568)
chr8 (184-331)||(36366024-36366170)
chr8 (196-330)||(8453595-8453728)
chr8 (190-331)||(24618957-24619097)
chr8 (190-316)||(32597512-32597638)
chr8 (184-333)||(22429537-22429685)
chr8 (184-333)||(24177974-24178122)
chr8 (184-338)||(35011214-35011369)
chr8 (190-331)||(42786372-42786511)
chr8 (240-317)||(24821904-24821981)
chr8 (190-274)||(8793775-8793859)
chr8 (190-274)||(24915226-24915309)
chr8 (232-275)||(30255783-30255826)
chr8 (196-269)||(4156394-4156468)
chr8 (190-272)||(15720207-15720289)
chr8 (196-293)||(883655-883752)
chr8 (184-245)||(40483285-40483346)
chr8 (187-331)||(5031463-5031607)
chr8 (199-275)||(26998720-26998796)
chr8 (199-250)||(35794606-35794657)
chr8 (217-275)||(13964470-13964528)
chr8 (224-274)||(27789321-27789371)
chr8 (219-284)||(36191793-36191856)
chr8 (219-272)||(32272678-32272731)
chr8 (184-241)||(32575173-32575230)
[»] chr3 (46 HSPs)
chr3 (190-316)||(35099069-35099195)
chr3 (190-332)||(45010748-45010890)
chr3 (190-316)||(23222972-23223097)
chr3 (187-320)||(44518041-44518174)
chr3 (190-331)||(21662894-21663035)
chr3 (186-331)||(54537447-54537592)
chr3 (196-332)||(43448972-43449108)
chr3 (195-331)||(52864964-52865100)
chr3 (190-332)||(53441905-53442047)
chr3 (217-316)||(25954036-25954135)
chr3 (190-284)||(40460353-40460448)
chr3 (198-331)||(12064908-12065041)
chr3 (196-333)||(29457837-29457973)
chr3 (210-332)||(8266261-8266381)
chr3 (196-332)||(51723392-51723528)
chr3 (190-293)||(53357325-53357429)
chr3 (190-332)||(51516966-51517107)
chr3 (196-333)||(33371875-33372011)
chr3 (187-319)||(33808321-33808452)
chr3 (199-333)||(25910188-25910322)
chr3 (196-274)||(49885393-49885470)
chr3 (190-271)||(12747756-12747837)
chr3 (224-331)||(13622486-13622593)
chr3 (190-329)||(36985164-36985303)
chr3 (190-329)||(37010603-37010742)
chr3 (196-318)||(43343455-43343582)
chr3 (191-316)||(19649593-19649718)
chr3 (184-280)||(5177816-5177911)
chr3 (215-274)||(32711258-32711317)
chr3 (206-312)||(9236111-9236217)
chr3 (197-259)||(16295401-16295463)
chr3 (190-332)||(21662884-21663026)
chr3 (215-272)||(48593175-48593232)
chr3 (196-274)||(7136812-7136890)
chr3 (247-317)||(9197094-9197164)
chr3 (188-274)||(19649585-19649671)
chr3 (190-272)||(28406525-28406607)
chr3 (186-247)||(44593205-44593266)
chr3 (198-271)||(47505231-47505304)
chr3 (213-284)||(2544489-2544561)
chr3 (198-293)||(29290794-29290889)
chr3 (190-272)||(8987737-8987819)
chr3 (186-272)||(9190086-9190172)
chr3 (190-324)||(40198401-40198535)
chr3 (192-274)||(40198405-40198487)
chr3 (196-260)||(47977936-47978000)
[»] chr2 (58 HSPs)
chr2 (197-320)||(32457223-32457346)
chr2 (191-319)||(10204936-10205063)
chr2 (196-331)||(38982998-38983133)
chr2 (186-320)||(30758730-30758863)
chr2 (190-331)||(20555266-20555406)
chr2 (184-331)||(30761380-30761527)
chr2 (193-316)||(33824361-33824484)
chr2 (188-333)||(29988898-29989043)
chr2 (191-331)||(12962714-12962854)
chr2 (190-317)||(29169848-29169975)
chr2 (196-319)||(35728475-35728599)
chr2 (196-319)||(11030203-11030326)
chr2 (190-331)||(7943438-7943580)
chr2 (190-332)||(9152377-9152519)
chr2 (190-320)||(38554468-38554598)
chr2 (200-317)||(39445013-39445130)
chr2 (184-333)||(45571032-45571180)
chr2 (184-333)||(45574699-45574847)
chr2 (184-333)||(45578366-45578514)
chr2 (184-333)||(45582033-45582181)
chr2 (184-333)||(45585700-45585848)
chr2 (184-333)||(45589367-45589515)
chr2 (184-333)||(45593034-45593182)
chr2 (184-333)||(45596701-45596849)
chr2 (184-333)||(45600368-45600516)
chr2 (184-333)||(45604035-45604183)
chr2 (184-333)||(45607702-45607850)
chr2 (184-333)||(45611369-45611517)
chr2 (184-333)||(45615036-45615184)
chr2 (196-313)||(41153128-41153245)
chr2 (196-317)||(42698077-42698198)
chr2 (196-319)||(4410788-4410912)
chr2 (190-333)||(43713971-43714113)
chr2 (184-331)||(45034400-45034546)
chr2 (190-316)||(5109371-5109497)
chr2 (196-333)||(3838415-3838551)
chr2 (217-316)||(39118049-39118148)
chr2 (196-317)||(28248946-28249067)
chr2 (191-320)||(34447514-34447642)
chr2 (196-332)||(4063286-4063421)
chr2 (197-332)||(33273968-33274103)
chr2 (198-316)||(12873739-12873857)
chr2 (235-317)||(28494757-28494839)
chr2 (190-319)||(4044586-4044714)
chr2 (191-244)||(5559372-5559425)
chr2 (206-319)||(28014297-28014410)
chr2 (196-332)||(36881547-36881677)
chr2 (224-319)||(2936335-2936430)
chr2 (227-312)||(3837428-3837513)
chr2 (190-320)||(11182175-11182306)
chr2 (197-320)||(15384442-15384564)
chr2 (186-272)||(7833286-7833372)
chr2 (199-319)||(22333536-22333656)
chr2 (196-306)||(5281202-5281311)
chr2 (215-293)||(37670351-37670429)
chr2 (186-272)||(41205494-41205580)
chr2 (190-247)||(4740793-4740850)
chr2 (234-275)||(12397118-12397159)
[»] chr6 (30 HSPs)
chr6 (187-332)||(17265719-17265864)
chr6 (190-317)||(30627831-30627958)
chr6 (196-332)||(3064897-3065033)
chr6 (190-322)||(28630761-28630893)
chr6 (190-275)||(2230404-2230489)
chr6 (196-331)||(8052869-8053005)
chr6 (186-332)||(2810083-2810228)
chr6 (190-315)||(12450359-12450484)
chr6 (199-332)||(28863337-28863470)
chr6 (220-328)||(9077624-9077732)
chr6 (196-331)||(33119903-33120036)
chr6 (190-293)||(2972172-2972275)
chr6 (190-316)||(10283308-10283434)
chr6 (196-332)||(30895198-30895334)
chr6 (215-331)||(27909007-27909124)
chr6 (189-316)||(7649806-7649935)
chr6 (196-272)||(1158303-1158379)
chr6 (193-316)||(12999769-12999893)
chr6 (193-263)||(17705929-17705999)
chr6 (196-274)||(1837016-1837093)
chr6 (200-275)||(10753637-10753709)
chr6 (188-272)||(5483867-5483951)
chr6 (199-331)||(30438760-30438892)
chr6 (196-331)||(8646678-8646812)
chr6 (210-320)||(1158273-1158383)
chr6 (191-245)||(27909060-27909114)
chr6 (187-329)||(28630754-28630896)
chr6 (217-275)||(3046652-3046706)
chr6 (188-274)||(7649855-7649943)
chr6 (190-231)||(25538047-25538088)
[»] scaffold0136 (1 HSPs)
scaffold0136 (194-333)||(16541-16680)
[»] scaffold0123 (1 HSPs)
scaffold0123 (190-316)||(28101-28229)
[»] scaffold0001 (3 HSPs)
scaffold0001 (190-331)||(156767-156908)
scaffold0001 (38-102)||(149001-149065)
scaffold0001 (190-231)||(156776-156817)
[»] scaffold0236 (1 HSPs)
scaffold0236 (190-272)||(16709-16788)
[»] scaffold0767 (1 HSPs)
scaffold0767 (190-261)||(3731-3802)
[»] scaffold0110 (1 HSPs)
scaffold0110 (190-331)||(1532-1672)
[»] scaffold0028 (1 HSPs)
scaffold0028 (220-319)||(71860-71959)
[»] scaffold0023 (1 HSPs)
scaffold0023 (19-91)||(90123-90195)
[»] scaffold0070 (1 HSPs)
scaffold0070 (196-275)||(40159-40238)
[»] scaffold0242 (1 HSPs)
scaffold0242 (196-302)||(16521-16626)
[»] scaffold0247 (1 HSPs)
scaffold0247 (43-102)||(21950-22009)
[»] scaffold0086 (1 HSPs)
scaffold0086 (232-275)||(1487-1530)
[»] scaffold0193 (1 HSPs)
scaffold0193 (44-102)||(24366-24424)
[»] scaffold0778 (1 HSPs)
scaffold0778 (219-320)||(5282-5382)


Alignment Details
Target: chr5 (Bit Score: 123; Significance: 9e-63; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 33867122 - 33866957
Alignment:
Q  19 aaaccccaccattaatagagaaagtttttctgaggatgaagttgatatgattctaaggttacacaagctcctagggaacaggtatgtatgatgccaaggc 118  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||    
T  33867122 aaaccccaccatcaatagagagagtttttctgaggatgaagttgatatgattttaaggttacacaagcttttagggaacaggtatgtatgatgccaaggc 33867023  T
Q  119 caagttatcatttaattaaatattttcttataattcaattttagttgctaatattatattcttaata 185  Q
    |||||||||||||||||||||||||||||||||||||| || || || ||| |||||||||||||||    
T  33867022 caagttatcatttaattaaatattttcttataattcaa-ttcagctgttaacattatattcttaata 33866957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 195 - 332
Target Start/End: Original strand, 22101921 - 22102058
Alignment:
Q  195 ttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaac 294  Q
    ||||||||||||||||||| | |||||| |||||||| |||||| |||||||||||||| |||||||| ||||||||| || |||||||||||| ||||     
T  22101921 ttatttataagaaaaatttgattttttagattcattgtgtaattaatgtatcttgtctaaaatatagatcaaatacattatttatacaataaatcaaaaa 22102020  T
Q  295 atttaaatatttcttataaataggactggagggagtat 332  Q
    | | |||||||||||||||||| ||  |||||||||||    
T  22102021 agtcaaatatttcttataaatatgatcggagggagtat 22102058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 196 - 328
Target Start/End: Complemental strand, 5002274 - 5002142
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    |||||||||||||| ||| |||||||| ||| |||||||||||||||||||||||||| |||||||| |||||||||||| ||| |||| ||| |||| |    
T  5002274 tatttataagaaaatttttactttttagatttattgagtaattgatgtatcttgtctaaaatatagatcaaatacatcatttatgcaattaatcaaaaaa 5002175  T
Q  296 tttaaatatttcttataaataggactggaggga 328  Q
     | |||| ||||||||||||||||| |||||||    
T  5002174 gtcaaatgtttcttataaataggaccggaggga 5002142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 196 - 320
Target Start/End: Original strand, 18473489 - 18473613
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||| ||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||| |||| |    
T  18473489 tatttatgagagaaatttgactttttagattcattgagtaattgatgtatcttgtctagaatatagatcaaatgcatcatttatacaatgaatcaaaaaa 18473588  T
Q  296 tttaaatatttcttataaataggac 320  Q
     | |||| |||||||||||||||||    
T  18473589 gtcaaatgtttcttataaataggac 18473613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 196 - 332
Target Start/End: Complemental strand, 21488417 - 21488281
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| |||| |||||||| |||||  |||||| |||||| |||||||||||||||||||||||||| || ||| |||| |||||||| |    
T  21488417 tatttataagaaaaagttaattttttaaactcattatgtaattaatgtattttgtctagaatatagaccaaatacattatttatgcaatgaattaaaaaa 21488318  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | ||||||||||||||||||||||  ||||||||||    
T  21488317 gtcaaatatttcttataaataggacatgagggagtat 21488281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 190 - 332
Target Start/End: Original strand, 29299365 - 29299508
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| |||||||||||||||||| | |||||| ||||||||||| |||||||||| ||||||| |||||||||| |||||||||| |||||||| ||||    
T  29299365 cggtcctatttataagaaaaatttgattttttagattcattgagtgattgatgtattttgtctaaaatatagaccgaatacatcatttatacaatgaatt 29299464  T
Q  290 -aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
     |||| | | |||| |||||||||| |||||| |||||||||||    
T  29299465 caaaaaagtcaaatgtttcttataactaggaccggagggagtat 29299508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 11931977 - 11932119
Alignment:
Q  190 cggtcttatttataagaaaaat-ttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaat 288  Q
    ||||| |||||||||||||||  || |||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||||||| |||| |||||||    
T  11931977 cggtcctatttataagaaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctaaaatatagaccaaatacatcatttatataataaat 11932076  T
Q  289 taaaacatttaaatatttcttataaataggactggagggagta 331  Q
     |||| | |||||| |||||| |||||||||| ||||| ||||    
T  11932077 caaaaaaattaaatgtttcttttaaataggaccggaggaagta 11932119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 584 - 699
Target Start/End: Complemental strand, 33866400 - 33866287
Alignment:
Q  584 caaataaacctttgataaatactactagttaagtgtcttagatctcagaaatattcataaaaaaggacaagtgtcttacaatattggggaagtcaatatt 683  Q
    |||||||||||||||| |||||||||||||||||||||||||||  ||| ||||| |||||||||||||||||||||| |||| || |||||||||||||    
T  33866400 caaataaacctttgattaatactactagttaagtgtcttagatc-aagagatattgataaaaaaggacaagtgtcttataata-tgaggaagtcaatatt 33866303  T
Q  684 aaatggataatgttta 699  Q
    |||| ||||| |||||    
T  33866302 aaatagataaagttta 33866287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 346 - 463
Target Start/End: Complemental strand, 33866944 - 33866825
Alignment:
Q  346 aaatataagtttattcgtttataaagtgtaagcttagtagtatg-agcttgttttgtaatctgaagggtcaaaa-ttcaaattttctcaaagatgggtgt 443  Q
    |||| |||||||||| ||| ||||||||||||||||| || ||| || |||||||||||||||||||||||||| ||||||||||||| ||||| |||||    
T  33866944 aaatgtaagtttatttgttcataaagtgtaagcttagcagcatggagtttgttttgtaatctgaagggtcaaaaattcaaattttctcgaagattggtgt 33866845  T
Q  444 gaaaatgaccaatatataat 463  Q
    ||||| ||||||||||||||    
T  33866844 gaaaaagaccaatatataat 33866825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 206 - 332
Target Start/End: Original strand, 33478131 - 33478257
Alignment:
Q  206 aaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatt 305  Q
    |||||||| | |||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| |||| ||| ||||   | |||| ||    
T  33478131 aaaaatttgaatttttagattcattgagtaattgatgtatctcgtctagaatataggccaaatacatcatttatgcaatgaatcaaaaatgtcaaatgtt 33478230  T
Q  306 tcttataaataggactggagggagtat 332  Q
    ||||||||||||||| |||||||||||    
T  33478231 tcttataaataggaccggagggagtat 33478257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 196 - 320
Target Start/End: Original strand, 18718252 - 18718377
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatac---atcatctatacaataaattaaa 292  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||    ||||| ||| |||||||| |||    
T  18718252 tatttataagaaaaatttaacattttaaatttattgagtaattaatgtatcttgtctagaatatagaccaaataatatatcatttatgcaataaatcaaa 18718351  T
Q  293 acatttaaatatttcttataaataggac 320  Q
    | | |||  | |||||||||||||||||    
T  18718352 aaaatta--tttttcttataaataggac 18718377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 190 - 275
Target Start/End: Complemental strand, 36434818 - 36434733
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    |||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||| |||||||| |||||    
T  36434818 cggttttatttataagaaaaatttaactttttagattcattaagtaattgatgtatcttgtctaaaatataaaccaaatatatcat 36434733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 191 - 325
Target Start/End: Original strand, 16619026 - 16619161
Alignment:
Q  191 ggtcttatttataagaaaaatttaactttttaa-attcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||||||||| | ||||| | |||| |||||||||||||||||| ||||||||||| |||||||||| ||||| ||| ||||||||     
T  16619026 ggtcttatttataagaaaaatttgatttttttagattcgttgagtaattgatgtatcatgtctagaatagagaccaaatatatcatttatgcaataaatc 16619125  T
Q  290 aaaacatttaaatatttcttataaataggactggag 325  Q
    ||||   | || ||||||||||||||| ||| ||||    
T  16619126 aaaaacgtcaactatttcttataaatatgaccggag 16619161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 36286174 - 36286061
Alignment:
Q  215 actttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaa 314  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||||||| |||||||| ||| |||| ||| |||| | | || |||||||||||||    
T  36286174 actttttagattaattgagtaattgatgtatcatgtctagaatatagaccaactacatcatttatgcaatgaatcaaaaaaatcaagtatttcttataaa 36286075  T
Q  315 taggactggaggga 328  Q
    ||| | ||||||||    
T  36286074 tagaattggaggga 36286061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 196 - 332
Target Start/End: Complemental strand, 13789866 - 13789730
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || |||||| | ||||||||| ||||| |||||  | || |||||| ||||||||||||||||| ||| |||| ||| |||| |    
T  13789866 tatttataagaaaaagttgacttttcagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatgcaatgaatcaaaaaa 13789767  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | |||| ||||||||||||||||| |||||||||||    
T  13789766 gtaaaatgtttcttataaataggaccggagggagtat 13789730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 215 - 331
Target Start/End: Complemental strand, 34297289 - 34297173
Alignment:
Q  215 actttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaa 314  Q
    |||||||| ||||||| |||||||||||| ||||||||| |||||||| ||| |||||||| ||| |||| |||||||| | | ||||||||||||||||    
T  34297289 actttttagattcattaagtaattgatgtgtcttgtctaaaatatagatcaattacatcatttatgcaatgaattaaaaaagtcaaatatttcttataaa 34297190  T
Q  315 taggactggagggagta 331  Q
    || ||| ||| ||||||    
T  34297189 taagaccggatggagta 34297173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 15968313 - 15968461
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| |||| |||||| ||||||| | ||||| |||||||| | |||||| ||||||||||||||||| |||| |||    
T  15968313 tacctccggtcctatttataagaaaaagttaattttttagattcattcaataattaatgtatctagcctagaa-atagaccaaatacatcaactattcaa 15968411  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| |||||||  |||||||||||    
T  15968412 tgaatcaaaaaagtaaattgtttcttatatataggacctgagggagtata 15968461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 332
Target Start/End: Original strand, 26327537 - 26327685
Alignment:
Q  184 taccttcggtcttatttataagaaaaat-ttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctataca 282  Q
    ||||| |||||||||||||||||||||  ||||||||||| ||||||| | ||||||||||| ||  |||| || ||||||||||||||||| |||| ||    
T  26327537 tacctccggtcttatttataagaaaaaaattaactttttagattcattcaataattgatgtacctaatctaaaa-atagaccaaatacatcaactattca 26327635  T
Q  283 ataaattaaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||||| |||| | | || | ||||||||| |||| || |||||||||||    
T  26327636 ataaatcaaaaaagtaaattctttcttatatatagaaccggagggagtat 26327685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 196 - 333
Target Start/End: Original strand, 38394442 - 38394579
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || |||||||| ||||||||| ||||| |||||  | || |||||| ||||||||||||||||| ||| |||| ||| |||| |    
T  38394442 tatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatgcaatgaatcaaaaaa 38394541  T
Q  296 tttaaatatttcttataaataggactggagggagtata 333  Q
     | |||| ||||||||||||||||  | ||||||||||    
T  38394542 gtaaaatgtttcttataaataggatcgaagggagtata 38394579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 331
Target Start/End: Complemental strand, 22731404 - 22731258
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| |||| |||||| ||||||| | ||||| ||||| || | |||||| ||||||||||||||||| |||| |||    
T  22731404 tacctccggtcctatttataagaaaaagttaattttttagattcattaaataattaatgtacctagcctagaa-atagaccaaatacatcaactattcaa 22731306  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagta 331  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||    
T  22731305 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 22731258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 206 - 272
Target Start/End: Original strand, 14723410 - 14723476
Alignment:
Q  206 aaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    ||||| |||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  14723410 aaaaaattaactttttaaattcattgagtaattgatatatctaatctagaatatagaccaaatacat 14723476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 190 - 332
Target Start/End: Complemental strand, 29031176 - 29031035
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| ||||||||||| ||||||| |  |||||||||| || | |||||| ||||||||||||||||| |||| |||| |||     
T  29031176 cggtcctatttataagaaaaagttaactttttagattcattcaacaattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 29031078  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||| | | || | ||||||||| ||| ||| |||||||||||    
T  29031077 aaaaaagtaaattgtttcttatatataagaccggagggagtat 29031035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 218 - 331
Target Start/End: Complemental strand, 919754 - 919641
Alignment:
Q  218 ttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaatag 317  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||| |||  ||| ||| |||| | | ||||||||| |||| |||     
T  919754 ttttagattcattgagtaattgatgtatctagtatagaatatagaccaaatacatcatttattgaatgaatcaaaaaagtcaaatatttcctatatatat 919655  T
Q  318 gactggagggagta 331  Q
    ||| ||| ||||||    
T  919654 gaccggatggagta 919641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 27488349 - 27488497
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| |||| |||||| ||||||| | |||||||||||||| | |||||| |||||||||||| |||| ||||  ||    
T  27488349 tacctccggtcctatttataagaaaaaattaattttttagattcattcaataattgatgtatctagcctagaa-atagaccaaatatatcaactattgaa 27488447  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| |||| |||||||    
T  27488448 tgaatcaaaaaagtaaattgtttcttatatataggaccggagagagtata 27488497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 196 - 325
Target Start/End: Complemental strand, 1138351 - 1138223
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || | |||||||||||||| | ||||| |||||||| | |||||| ||||||||||||||| |  ||| |||||||| |||| |    
T  1138351 tatttataagaaaaaattgattttttaaattcattaaataattaatgtatctagactagaa-atagaccaaatacattaattattcaataaatcaaaaaa 1138253  T
Q  296 tttaaatatttcttataaataggactggag 325  Q
     | || | ||||||||||||||||| ||||    
T  1138252 gtaaattgtttcttataaataggaccggag 1138223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 38362381 - 38362466
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaata 269  Q
    ||||||||||| |||||||||||||| |||||||||||| ||| | |||  |||||||||||||| |||| ||||||||| |||||    
T  38362381 taccttcggtcatatttataagaaaattttaactttttagattaactgaaaaattgatgtatcttatctaaaatatagactaaata 38362466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 206 - 331
Target Start/End: Original strand, 10228087 - 10228216
Alignment:
Q  206 aaaaatttaactttttaaattcattgagtaattgatgtatcttgtctaga----atatagaccaaatacatcatctatacaataaattaaaacatttaaa 301  Q
    ||||| ||||||||||| ||| |||||  |||||||||||||||||||||    |||||||| | ||||||||| |||||||| ||| |||| | | |||    
T  10228087 aaaaaattaactttttagatttattgaacaattgatgtatcttgtctagaatatatatagacgagatacatcatttatacaatgaatcaaaaaagtcaaa 10228186  T
Q  302 tatttcttataaataggactggagggagta 331  Q
    | ||||| ||||||| ||| ||||||||||    
T  10228187 tgtttctaataaataagaccggagggagta 10228216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 331
Target Start/End: Complemental strand, 1015289 - 1015155
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| ||||||||||| ||||||| | |||| |||||| ||    ||||| ||||||||||||||||| |||| |||| ||| |||| |    
T  1015289 tatttataagaaaaagttaactttttagattcattcaataatcgatgtacctaacttagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 1015191  T
Q  296 tttaaatatttcttataaataggactggagggagta 331  Q
     | || | ||||||||| ||||||| ||||||||||    
T  1015190 gtaaattgtttcttatatataggaccggagggagta 1015155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 236 - 333
Target Start/End: Original strand, 1248883 - 1248981
Alignment:
Q  236 attgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaat-taaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    ||||||||||||||||||||||||||| |||||||||||| |||  ||| |||  |||| | |||||| ||||||||||||||||| | ||| ||||||    
T  1248883 attgatgtatcttgtctagaatatagatcaaatacatcatttatcaaatgaataaaaaaaagttaaatgtttcttataaataggaccgaaggtagtata 1248981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 14913240 - 14913164
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    |||||||||||||||||| | |||||||||||||||||||||| || ||| |  | || ||||||||||||||||||    
T  14913240 tatttataagaaaaatttgattttttaaattcattgagtaattaatatatttgatataaaatatagaccaaatacat 14913164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 32452343 - 32452287
Alignment:
Q  215 actttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaataca 271  Q
    |||||||| |||||||| |||||| ||||| ||||||||||||||||||||||||||    
T  32452343 actttttatattcattgcgtaattaatgtagcttgtctagaatatagaccaaataca 32452287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 33734605 - 33734541
Alignment:
Q  38 gaaagtttttctgaggatgaagttgatatgattctaaggttacacaagctcctagggaacaggta 102  Q
    ||||| ||| |||||||||||||||||||||| |||||||||||||| || |||||||| |||||    
T  33734605 gaaagctttgctgaggatgaagttgatatgatcctaaggttacacaaacttctagggaataggta 33734541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 33904664 - 33904600
Alignment:
Q  38 gaaagtttttctgaggatgaagttgatatgattctaaggttacacaagctcctagggaacaggta 102  Q
    ||||| ||| |||||||||||||||||||||| |||||||||||||| || |||||||| |||||    
T  33904664 gaaagctttgctgaggatgaagttgatatgatgctaaggttacacaaacttctagggaataggta 33904600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 3814111 - 3814008
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||| ||||||||||||| || |||||||| |||| |||| ||||| |||||  | || |||||||||||| |||||||| || ||| ||||||||     
T  3814111 cggtcttgtttataagaaaaaattgactttttagattcgttgaataattaatgtacttggtatagaatatagactaaatacattatttatgcaataaata 3814012  T
Q  290 aaaa 293  Q
    ||||    
T  3814011 aaaa 3814008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 33698768 - 33698705
Alignment:
Q  35 agagaaagtttttctgaggatgaagttgatatgattctaaggttacacaagctcctagggaaca 98  Q
    |||||||||||  | ||||||||| ||||||||||||||||||||||||| || ||||||||||    
T  33698768 agagaaagtttcgccgaggatgaaattgatatgattctaaggttacacaaacttctagggaaca 33698705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 333
Target Start/End: Complemental strand, 13665073 - 13664943
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    |||||||||||| ||||| ||||   | ||||||||||||||    |||| |||| ||||||||||| |||||||||||| ||| |||| |||||||| |    
T  13665073 tatttataagaacaatttgactt---agattcattgagtaat----gtatgttgtttagaatatagatcaaatacatcatttatgcaattaattaaaaaa 13664981  T
Q  296 tttaaatatttcttataaataggactggagggagtata 333  Q
     | |||| ||||||||||||| ||| ||| | ||||||    
T  13664980 gtcaaatgtttcttataaatatgaccggatgaagtata 13664943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 320
Target Start/End: Complemental strand, 32902908 - 32902778
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||||||| ||  ||||||||||||||||| ||||| || |||    | || ||||||||| ||||| || || |||||||| |||     
T  32902908 cggtcttatttataagaaaaaattgtctttttaaattcattgaataattaatatattcgatatataatatagactaaatatattatttatacaattaatc 32902809  T
Q  290 aaaacatttaaatatttcttataaataggac 320  Q
    ||||   |||| | |||||||||||||||||    
T  32902808 aaaaaggttaattgtttcttataaataggac 32902778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 8511517 - 8511460
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtcta 253  Q
    |||||| ||||||| ||| |||||||| ||||||||||||||||| ||||||||||||    
T  8511517 tatttagaagaaaattttgactttttagattcattgagtaattgacgtatcttgtcta 8511460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 196 - 317
Target Start/End: Complemental strand, 12094371 - 12094251
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||| | |||| ||||||||| |||||  |||||| ||||||| ||||| ||||||||||| |||||||| ||||  |||||||  ||| |    
T  12094371 tatttataagaaacaattaattttttaaat-cattgtttaattgttgtatctggtctaaaatatagaccacatacatcaactatttaataaatctaaaaa 12094273  T
Q  296 tttaaatatttcttataaatag 317  Q
     || | | ||||||||||||||    
T  12094272 gttgattgtttcttataaatag 12094251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 33680175 - 33680102
Alignment:
Q  32 aatagagaaagtttttctgaggatgaagttgatatgattctaaggttacacaagctcctagggaacaggtatgt 105  Q
    |||||||||||||| ||  | |||||| ||||||||||||||||| ||||||| ||| | ||||||||||||||    
T  33680175 aatagagaaagtttctcccatgatgaaattgatatgattctaaggctacacaaactcttggggaacaggtatgt 33680102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 332
Target Start/End: Complemental strand, 8235521 - 8235382
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaata 285  Q
    |||||| | |||||||||||||||| || | |||||| ||| ||||| ||||| || ||| | ||||| |||||| | |||||||||||| |||| ||||    
T  8235521 ccttcgattttatttataagaaaaaattgattttttagatttattgaataattaatatatttggtctataatataaatcaaatacatcatttatataata 8235422  T
Q  286 aattaaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||        | |||||||||| ||||||||||| |||||||||||    
T  8235421 aat-------gtcaaatatttctcataaataggaccggagggagtat 8235382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 33749096 - 33749013
Alignment:
Q  19 aaaccccaccattaatagagaaagtttttctgaggatgaagttgatatgattctaaggttacacaagctcctagggaacaggta 102  Q
    |||||| ||||| || |||||||  |||||||||||||||| ||||||||| || ||||||||||| ||| | ||||| |||||    
T  33749096 aaacccaaccatcaacagagaaatcttttctgaggatgaagctgatatgatccttaggttacacaacctcttggggaataggta 33749013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 333
Target Start/End: Complemental strand, 24173551 - 24173417
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacattt 298  Q
    |||||||||||| || ||||||||| || || || ||||| ||||||||| |  | ||||||||  | ||||||||  || ||||| || ||||| | |     
T  24173551 ttataagaaaaagttgactttttaagtttatagaataattaatgtatcttattgaaaatatagattagatacatcacttacacaatgaactaaaaaaatc 24173452  T
Q  299 aaatatttcttataaataggactggagggagtata 333  Q
    || ||||||||||||  ||||||||||||||||||    
T  24173451 aattatttcttataataaggactggagggagtata 24173417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 33846691 - 33846626
Alignment:
Q  19 aaaccccaccattaatagagaaagtttttctgaggatgaagttgatatgattctaaggttacacaa 84  Q
    |||||| ||||| || |||||||  |||||||||||||||| ||||||||| || |||||||||||    
T  33846691 aaacccaaccatcaacagagaaatcttttctgaggatgaagctgatatgatccttaggttacacaa 33846626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 460 - 492
Target Start/End: Complemental strand, 33866529 - 33866497
Alignment:
Q  460 taatgccactttattaataatatttcacttgct 492  Q
    |||||||||||||||||||||||||||||||||    
T  33866529 taatgccactttattaataatatttcacttgct 33866497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 19211297 - 19211348
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgt 250  Q
    ||||||||||  ||| |||||||| ||||||||||||||| |||||||||||    
T  19211297 ttataagaaacttttgactttttatattcattgagtaattaatgtatcttgt 19211348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 1420769 - 1420715
Alignment:
Q  218 ttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    ||||||||| ||| | ||||||||||||||| |||| | ||||||||||||||||    
T  1420769 ttttaaatttatttaataattgatgtatcttatctatattatagaccaaatacat 1420715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 7065714 - 7065664
Alignment:
Q  197 atttataagaaaaatttaactttttaaattcattgagtaattgatgtatct 247  Q
    ||||||||| |||| | ||||||||||||||||||| ||||| ||||||||    
T  7065714 atttataagcaaaaatcaactttttaaattcattgaataattaatgtatct 7065664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 14338947 - 14338873
Alignment:
Q  198 tttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    |||| |||| ||||||||||||||| || |||||| ||||| ||||||||  || ||||| || |||||||||||    
T  14338947 tttacaagagaaatttaactttttagatacattgaataatttatgtatctattcaagaatttaaaccaaatacat 14338873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 199 - 332
Target Start/End: Complemental strand, 19296089 - 19295955
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaat-acatcatctatacaataaattaaaacatt 297  Q
    |||||| ||||| || |||||||| ||||||||||||| | |||||  | || ||||| ||| ||||||| ||||||| ||| |||| ||| |||| | |    
T  19296089 ttataaaaaaaagttgactttttagattcattgagtaactaatgtacttggtatagaagatataccaaataacatcatttatccaatgaatcaaaaaaat 19295990  T
Q  298 taaatatttcttataaataggactggagggagtat 332  Q
     |||  |||||||||||||  |||||| |||||||    
T  19295989 caaacgtttcttataaataaaactggaaggagtat 19295955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 21090384 - 21090466
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    ||||| |||||| |||| ||| ||||||||||| || |||||| ||||  |||||||| ||| ||||| || |||||||||||    
T  21090384 cggtcctatttacaagagaaaattaactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacat 21090466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 274
Target Start/End: Complemental strand, 26313398 - 26313320
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    ||||| ||||||||| || |||||||||||| |||  |||||| |  |||||||| || |||||||| |||||||||||    
T  26313398 tatttttaagaaaaaatttactttttaaatttattatgtaattaacatatcttgtttacaatatagatcaaatacatca 26313320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 34297182 - 34297236
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgta 244  Q
    ||||||||||||||||||| |||| ||||||| |||||||||  ||| |||||||    
T  34297182 cggtcttatttataagaaatatttgacttttttaattcattgcataaatgatgta 34297236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 35349546 - 35349496
Alignment:
Q  197 atttataagaaaaatttaactttttaaattcattgagtaattgatgtatct 247  Q
    |||||||| ||| | || |||||||| ||||||||||||||||||||||||    
T  35349546 atttataaaaaataattgactttttagattcattgagtaattgatgtatct 35349496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 37322657 - 37322611
Alignment:
Q  217 tttttaaattcattgagtaattgatgtatcttgtctagaatatagac 263  Q
    |||| ||||||||||| |||||||||||||| ||||| |||||||||    
T  37322657 ttttcaaattcattgaataattgatgtatctggtctaaaatatagac 37322611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 39239808 - 39239882
Alignment:
Q  196 tatttataagaaaaat-ttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaata 269  Q
    |||||||||||||||  ||  ||||||| |||||||| |||||| ||||||||||| | ||||||||| ||||||    
T  39239808 tatttataagaaaaaaattgtctttttagattcattgtgtaattaatgtatcttgtattgaatatagatcaaata 39239882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 1248976 - 1248939
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaacttttt 221  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  1248976 taccttcggtcctatttataagaaacatttaacttttt 1248939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 272
Target Start/End: Complemental strand, 7750061 - 7749976
Alignment:
Q  187 cttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    |||||||| |||||| |||| ||| || |||||||| || |||||| ||||  |||||||| ||| ||||| || |||||||||||    
T  7750061 cttcggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacat 7749976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 15969091 - 15969160
Alignment:
Q  205 gaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    |||||| ||||||||||| || |||||| || ||||| |||||  |||| ||||||||||| ||||||||    
T  15969091 gaaaaaattaactttttagatgcattgaatacttgatatatctgatctataatatagaccatatacatca 15969160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 4e-43; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 48361060 - 48361201
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| |||     
T  48361060 cggtcctatttataagaaaaatttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatc 48361159  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagta 331  Q
    |||| | | |||| ||||||||||||||||| ||||||||||    
T  48361160 aaaaaagtcaaatgtttcttataaataggacaggagggagta 48361201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 190 - 332
Target Start/End: Complemental strand, 36132775 - 36132633
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||||||| || |||||| | || ||||||||| |||||||||||||||| |||||||||| ||||||||||| |||||||| |||     
T  36132775 cggtcttatttataagaaaaaattgacttttaagatacattgagtagttgatgtatcttgtcttgaatatagactaaatacatcatttatacaatgaatc 36132676  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||| | | ||||||||||||||||||||||||||||||||||    
T  36132675 aaaaaagtcaaatatttcttataaataggactggagggagtat 36132633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 50121441 - 50121587
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaata 285  Q
    |||||||||||||||||||||||||||| |||||||| ||| ||||| | ||||||||||||||||||| |||||||||||||| ||||| ||| ||||     
T  50121441 ccttcggtcttatttataagaaaaatttgactttttagatttattgaatgattgatgtatcttgtctagtatatagaccaaatatatcatttatgcaatg 50121540  T
Q  286 aattaaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||||||| | | |||| |||||||||||||||||| ||||||||||    
T  50121541 aattaaaaaagtcaaatgtttcttataaataggactagagggagtat 50121587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 190 - 335
Target Start/End: Complemental strand, 44111885 - 44111740
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||| |||  ||| |||     
T  44111885 cggtcttatttataagaaaaagttgactttttagattcattgagtaattgatgtatcttctttagaatatagaccaaatacatcatttatgtaattaatc 44111786  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtatagt 335  Q
    |||| | | |||| ||||||||||||||||| ||||||||||||||    
T  44111785 aaaaaagtcaaatgtttcttataaataggaccggagggagtatagt 44111740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 196 - 333
Target Start/End: Complemental strand, 25477679 - 25477542
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| ||| |||| ||| |||| |    
T  25477679 tatttataagaaaattttgactttttaaattcattgagtaattgatgtattttgtgtagaatatagatcaaatacatcatttatgcaatgaatcaaaaaa 25477580  T
Q  296 tttaaatatttcttataaataggactggagggagtata 333  Q
     | |||||||| ||||||||||||||||||| ||||||    
T  25477579 gtcaaatattttttataaataggactggaggtagtata 25477542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 191 - 332
Target Start/End: Original strand, 48195899 - 48196040
Alignment:
Q  191 ggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatta 290  Q
    |||| |||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| ||  |    
T  48195899 ggtcctatttataagaaaaaactaactttttaaattcattgagtaattgacgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaacca 48195998  T
Q  291 aaacatttaaatatttcttataaataggactggagggagtat 332  Q
    ||| | | |||| ||||||||||||||||| ||||| |||||    
T  48195999 aaaaagtcaaatgtttcttataaataggaccggaggaagtat 48196040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 196 - 332
Target Start/End: Original strand, 30191910 - 30192046
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || | |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||| |||| |    
T  30191910 tatttataagaaaaaattgattttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaa 30192009  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     |||||| ||||||||||||| ||| |||||||||||    
T  30192010 gttaaatgtttcttataaatacgaccggagggagtat 30192046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 41116570 - 41116695
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||| || ||||||||||||     
T  41116570 cggtcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagaccaaatacat-atttatacaataaata 41116668  T
Q  290 aaaacatttaaatatttcttataaata 316  Q
    |||| | | |||  |||||||||||||    
T  41116669 aaaaaaatgaaaagtttcttataaata 41116695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 193 - 331
Target Start/End: Original strand, 4386147 - 4386285
Alignment:
Q  193 tcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaa 292  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||||||| |||  ||| ||| |||    
T  4386147 tcttatttataagaaaaatttgactttttaaattcattaagtaattgatgtattttatctacaatatagactaaatacatcatttatgtaatgaatcaaa 4386246  T
Q  293 acatttaaatatttcttataaataggactggagggagta 331  Q
    | | | |||| |||||||||||||  |||||||| ||||    
T  4386247 aaagtcaaatttttcttataaataaaactggaggaagta 4386285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 196 - 332
Target Start/End: Original strand, 8347659 - 8347795
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||||||| |||| || |||||||||| |||||||||| |||||||| ||| |||| |    
T  8347659 tatttataagaaaaatttgactttttagattcattgagtgattgatgtattttgtataaaatatagaccgaatacatcatttatacaatgaataaaaaaa 8347758  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | |||| ||||||||||||  ||| ||||| |||||    
T  8347759 gtcaaatgtttcttataaattagaccggaggaagtat 8347795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 190 - 333
Target Start/End: Original strand, 3162903 - 3163046
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||| || |||||||||||||||||||||  |||||||||| ||| |||| |||     
T  3162903 cggtcttatttataagaaaaaattgactttttaaattcattgtgtaattaatatatcttgtctagaatatagactcaatacatcatttatgcaatgaatc 3163002  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    |||| | | |||| ||| ||||||||| ||| ||| | ||||||    
T  3163003 aaaaaagtcaaatgttttttataaataagaccggaagaagtata 3163046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 215 - 333
Target Start/End: Complemental strand, 17284850 - 17284732
Alignment:
Q  215 actttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaa 314  Q
    |||||||||||| ||||  |||||||||||||||||||||||||||||||| ||||||||| ||| |||| ||| |||| | | |||||||  |||||||    
T  17284850 actttttaaatttattgtataattgatgtatcttgtctagaatatagaccacatacatcatttatgcaatgaatcaaaaaaatcaaatattcattataaa 17284751  T
Q  315 taggactggagggagtata 333  Q
    |||||| ||||||||||||    
T  17284750 taggaccggagggagtata 17284732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 219 - 328
Target Start/End: Complemental strand, 35429884 - 35429775
Alignment:
Q  219 tttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaatagg 318  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| | ||| |||  ||| |||| | | |||||||||||||||||||     
T  35429884 tttagattaattgagtaattgatgtatcttgtctagaatatagaccaaatacatcttttatgcaacgaataaaaaaagtcaaatatttcttataaataga 35429785  T
Q  319 actggaggga 328  Q
    ||||||||||    
T  35429784 actggaggga 35429775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 184 - 331
Target Start/End: Original strand, 47866038 - 47866184
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  47866038 tacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 47866136  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagta 331  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||    
T  47866137 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 47866184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 196 - 327
Target Start/End: Complemental strand, 53658498 - 53658367
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| |||| |||||| ||| ||||  ||| | |||||| |||||||||||||||||||||||||| ||  ||||||| ||| |||| |    
T  53658498 tatttataagaaaaagttaattttttagatttattgtataactaatgtattttgtctagaatatagaccaaatacattattcatacaatgaataaaaaaa 53658399  T
Q  296 tttaaatatttcttataaataggactggaggg 327  Q
     |||||||||||||||||||| ||| ||||||    
T  53658398 gttaaatatttcttataaatatgaccggaggg 53658367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 184 - 332
Target Start/End: Original strand, 3043794 - 3043941
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||||||||| ||||||||||||||| |||| |||||| ||||||| | ||||||||||| || ||||| || ||||||||||||||||| |||| |||    
T  3043794 taccttcggtcctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagtcta-aaaatagaccaaatacatcaactattcaa 3043892  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    | ||| |||| | | || | ||||||||| |||| || |||||||||||    
T  3043893 tgaatcaaaaaaataaattgtttcttatatatagaaccggagggagtat 3043941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 43117997 - 43117862
Alignment:
Q  187 cttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataa 286  Q
    |||||||  ||||||||||||||| || | |||||| ||||||||| |||||||||||| | || || ||||||||||||||||||||| ||| ||||||    
T  43117997 cttcggttctatttataagaaaaaattgattttttacattcattgaataattgatgtatttggtataaaatatagaccaaatacatcatttatgcaataa 43117898  T
Q  287 at--taaaacatttaaatatttcttataaataggac 320  Q
    ||   |||| | ||||||||||| ||||||||||||    
T  43117897 atcaaaaaaaagttaaatatttcatataaataggac 43117862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 42670778 - 42670901
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| ||||||||||  |||||||| |||||| |||||||| || |||||||||||||||||| ||||| ||| |||| |||  ||| |    
T  42670778 tatttataagaaaaagttaacttttttgattcattgtgtaattaatgtatctcgtttagaatatagaccaaatatatcatttatgcaatgaatctaaaaa 42670877  T
Q  296 tttaaatatttcttataaatagga 319  Q
     | |||| ||||||||||||||||    
T  42670878 gtcaaatgtttcttataaatagga 42670901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 196 - 333
Target Start/End: Original strand, 16412248 - 16412385
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || |||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||| || ||| ||||   | |||  |    
T  16412248 tatttataagaaaaaattgactttttagattcattgaataattgatatatttggtctagaatatagaccaaatacattatttatgcaatgtgtcaaagaa 16412347  T
Q  296 tttaaatatttcttataaataggactggagggagtata 333  Q
     | |||||||||||||| |||| || ||||||||||||    
T  16412348 gtcaaatatttcttatatatagaaccggagggagtata 16412385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 42804258 - 42804406
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| ||  | ||||| ||||||||||||||||| ||||  ||    
T  42804258 tacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaatttagaa-atagaccaaatacatcaactatttaa 42804356  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  42804357 tgaatcaaaaaaataaattgtttcttatatataggaccggagggagtata 42804406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 20459386 - 20459251
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  20459386 tacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 20459288  T
Q  284 taaattaaaacatttaaatatttcttataaataggac 320  Q
    | ||| |||| | | || | ||||||||| |||||||    
T  20459287 tgaatcaaaaaagtaaattgtttcttatatataggac 20459251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 191 - 275
Target Start/End: Complemental strand, 42169182 - 42169098
Alignment:
Q  191 ggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    |||| |||||||||||||||||| |||||||| ||| ||||| |||||||||||| |||||| |||||| |||||||||||||||    
T  42169182 ggtcctatttataagaaaaatttgactttttagatttattgaataattgatgtattttgtcttgaatatggaccaaatacatcat 42169098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 228 - 331
Target Start/End: Complemental strand, 9044489 - 9044386
Alignment:
Q  228 attgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaataggactggaggg 327  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||||| |||||||| ||| |||| | | ||||||||||||| ||||  |||||| ||    
T  9044489 attgagtaattgatgtattttgtctagaatataggccaaagacatcatttatacaatgaatcaaaaaagtcaaatatttcttatgaataaaactggaagg 9044390  T
Q  328 agta 331  Q
    ||||    
T  9044389 agta 9044386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 186 - 317
Target Start/End: Complemental strand, 45828559 - 45828428
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaata 285  Q
    ||||||||| ||||||||||||||| || | |||||| ||||||||||||||| |||||| | ||||| |||||| |||||||||||||| |||  ||      
T  45828559 ccttcggtcctatttataagaaaaaattgattttttagattcattgagtaattaatgtatttggtctataatataaaccaaatacatcatttatgtaaag 45828460  T
Q  286 aattaaaacatttaaatatttcttataaatag 317  Q
    ||| |||| | | |||||||| ||||||||||    
T  45828459 aatcaaaaaaatcaaatattttttataaatag 45828428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 190 - 328
Target Start/End: Original strand, 43020764 - 43020901
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| ||   |||||| ||||||||||||||||| |||| |||| |||     
T  43020764 cggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaacctagaa-atagaccaaatacatcaactattcaatgaatc 43020862  T
Q  290 aaaacatttaaatatttcttataaataggactggaggga 328  Q
    |||| | | || | ||||||||| ||||||| |||||||    
T  43020863 aaaaaagtaaattgtttcttatatataggaccggaggga 43020901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 217 - 331
Target Start/End: Original strand, 45096609 - 45096723
Alignment:
Q  217 tttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaata 316  Q
    |||||| ||| ||||| |||||||||||||||||||||| ||||||||||||| ||||| ||| |||||||| |||| | | |||| ||| |||||||||    
T  45096609 tttttagatttattgaataattgatgtatcttgtctagattatagaccaaatatatcatttatgcaataaatcaaaaaagtcaaatgttttttataaata 45096708  T
Q  317 ggactggagggagta 331  Q
     ||  ||||||||||    
T  45096709 tgataggagggagta 45096723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 9894633 - 9894718
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    ||||| ||||||||||||||| || |||||||| |||||||  || ||| ||||||||||||||||||||||| ||||||||||||    
T  9894633 cggtcctatttataagaaaaagttgactttttagattcattatgttattaatgtatcttgtctagaatatagatcaaatacatcat 9894718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 44061521 - 44061402
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| |  | ||||||||||||||| ||||||  |||||||||||||||||||||||||||||||| || ||| |||| ||| |||| |    
T  44061521 tatttataagaaaaaatcga-tttttaaattcattgtgtaattagtgtatcttgtctagaatatagaccaaatacattatttatgcaatgaatcaaaaaa 44061423  T
Q  296 tttaaatatttcttataaata 316  Q
     | |||  |||||||||||||    
T  44061422 ctcaaacgtttcttataaata 44061402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 333
Target Start/End: Complemental strand, 20745471 - 20745329
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| |||| |||||| ||||||| | ||||||||||| || | |||||| ||||| ||||||||||| |||| |||| |||     
T  20745471 cggtcctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacatcaactattcaatgaatc 20745373  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    |||| | | || | ||| ||||| ||||||| ||||||||||||    
T  20745372 aaaaaagtaaattgttttttatatataggaccggagggagtata 20745329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 53225784 - 53225681
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| || |||||||| ||||||||| ||||| |||||| | || |||||| ||||||||||||||||| ||| |||| |||     
T  53225784 cggtcctatttataagaaaaaattgactttttagattcattgaataattaatgtatttggtatagaatgtagaccaaatacatcatttatgcaatgaatc 53225685  T
Q  290 aaaa 293  Q
    ||||    
T  53225684 aaaa 53225681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 23226963 - 23227041
Alignment:
Q  195 ttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatc 273  Q
    |||||||||||||||| || |||||||| |||||||  |||||| |||||||||||||| || ||||||||||||||||    
T  23226963 ttatttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctaaaaaatagaccaaatacatc 23227041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 196 - 317
Target Start/End: Complemental strand, 21554242 - 21554122
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || | |||||| ||||||||||||||| |||||| |  | |||||||||||||||||||||||| ||| |||| |||  ||| |    
T  21554242 tatttataagaaaaagttgattttttagattcattgagtaattaatgtat-tgatatagaatatagaccaaatacatcatttatgcaatgaatcgaaaaa 21554144  T
Q  296 tttaaatatttcttataaatag 317  Q
     | |||||||| ||||||||||    
T  21554143 gtcaaatattttttataaatag 21554122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 184 - 332
Target Start/End: Complemental strand, 55190812 - 55190665
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| || | |||||| ||||||| | |||||||||||||| | |||||| |||||||||||||||||  ||| ||     
T  55190812 tacctccggtcctatttataagaaaaaattgattttttatattcattcaataattgatgtatctagcctagaa-atagaccaaatacatcaattatccac 55190714  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    | ||| |||| | | || | ||||||||| |||||||  ||||||||||    
T  55190713 tgaatcaaaaaagtaaattgtttcttatatataggaccagagggagtat 55190665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 321
Target Start/End: Original strand, 33010678 - 33010813
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaata 285  Q
    |||||| || ||||||||||||||| || | |||||| ||| |||| |||||| || ||| |||| ||||||||| |  ||||||||||| |||| || |    
T  33010678 ccttcgatcctatttataagaaaaaattgattttttagattaattgtgtaattaatatattttgtttagaatatatattaaatacatcatttataaaaaa 33010777  T
Q  286 aattaaaacatttaaatatttcttataaataggact 321  Q
    ||| |||| | ||||| |||||||||||||| ||||    
T  33010778 aatcaaaaaaattaaacatttcttataaataagact 33010813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 197 - 275
Target Start/End: Original strand, 14859720 - 14859798
Alignment:
Q  197 atttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    |||||||| |||||||| |  ||||| |||||||||| ||||||||||||||||||| |||||| || |||||||||||    
T  14859720 atttataataaaaatttgatattttagattcattgagaaattgatgtatcttgtctacaatatatactaaatacatcat 14859798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 266 - 332
Target Start/End: Complemental strand, 37991550 - 37991484
Alignment:
Q  266 aatacatcatctatacaataaattaaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||||||||| |||||||| ||| |||| |||||||| |||||||||||||||||| ||||||||||    
T  37991550 aatacatcatttatacaatgaatcaaaaaatttaaatgtttcttataaataggactagagggagtat 37991484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 47943731 - 47943877
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaata 285  Q
    ||||||||| |||||||| |||||| || |||||||| ||| ||||||||||| |||||  | || || ||||||||| ||||||||||| ||| ||||     
T  47943731 ccttcggtcctatttatatgaaaaaattgactttttagattaattgagtaattaatgtacttggtataaaatatagactaaatacatcatttatgcaatg 47943830  T
Q  286 aattaaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    ||| ||||   | |||| ||  ||||||||| ||| |||||||||||    
T  47943831 aatcaaaaatgtcaaatgttatttataaataagaccggagggagtat 47943877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 20956892 - 20957040
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||| ||||  |||| |||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| ||||  ||    
T  20956892 tacctccggtcctatttataaaaaaatgttaattttttagattcattcaataattgatgtagctagcctagaa-atagaccaaatacatcaactattgaa 20956990  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| |||| || ||||||||||||    
T  20956991 tgaatcaaaaaaataaattgtttcttatatatagaaccggagggagtata 20957040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 275
Target Start/End: Complemental strand, 28020609 - 28020532
Alignment:
Q  198 tttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    ||||||||||||| || |||||||||||| ||| ||||||| |||||| | || |||||||||||||||||| |||||    
T  28020609 tttataagaaaaagttgactttttaaatttattaagtaattaatgtatttagtatagaatatagaccaaataaatcat 28020532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 55951777 - 55951676
Alignment:
Q  215 actttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaa 314  Q
    |||||||| ||| ||||| ||||| ||||||||||||| ||||||| | |||||||||||| |||| ||  |||||||| | | |||||||| |||||||    
T  55951777 actttttagatttattgattaattaatgtatcttgtcttgaatataaatcaaatacatcatttatataacgaattaaaaaagtcaaatatttattataaa 55951678  T
Q  315 ta 316  Q
    ||    
T  55951677 ta 55951676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 331
Target Start/End: Complemental strand, 31977885 - 31977743
Alignment:
Q  191 ggtcttatttataagaaaaatttaactttttaaattcattgagtaattg--atgtatcttgtctagaatatagaccaaatacatcatctatacaataaat 288  Q
    |||| ||||||||||||||| |   ||||||| ||||||||||||||||  ||||||   || |||||||||||||||||| ||||| ||| | |  |||    
T  31977885 ggtcatatttataagaaaaaatcggctttttagattcattgagtaattgatatgtatagggtttagaatatagaccaaatatatcatttatgctaggaat 31977786  T
Q  289 taaaacatttaaatatttcttataaataggactggagggagta 331  Q
     |||| | | ||||||||||||||||||| ||  |||||||||    
T  31977785 aaaaaaaatcaaatatttcttataaatagaaccagagggagta 31977743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 46434107 - 46434237
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||| ||| |||| |||||||| |||| || ||||||| || ||| |||| ||||||||||| |||||| | ||| ||  |||| |||     
T  46434107 cggtcttatttataaaaaatatttgactttttagattctttaagtaattaatatatattgtttagaatatagatcaaatataccatttaagcaatgaatc 46434206  T
Q  290 aaaacatttaaatatttcttataaataggact 321  Q
    |||| | | |||||||||||||||||| ||||    
T  46434207 aaaa-agtcaaatatttcttataaatatgact 46434237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 274
Target Start/End: Original strand, 26066383 - 26066461
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    ||||||||||||| | || |||||  | ||||||||| |||||||||||||  ||||||||||||||||| ||||||||    
T  26066383 tatttataagaaataattgactttcaagattcattgaataattgatgtatccggtctagaatatagaccagatacatca 26066461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 32714381 - 32714283
Alignment:
Q  218 ttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaata 316  Q
    ||||| ||||||| | | |||||||||| ||||||||||||||||| ||||||||||| |||  ||| ||| |||| | | |||| |||||||||||||    
T  32714381 ttttagattcattcaatgattgatgtattttgtctagaatatagactaaatacatcatttatgtaatgaatcaaaaaagtcaaatgtttcttataaata 32714283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 196 - 332
Target Start/End: Complemental strand, 40780381 - 40780248
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||  ||||||||||||||| ||| | |||||||||||||| || || || |||||  |||||||||| ||||  ||| ||| |||| |    
T  40780381 tatttataagaaaa--ttaactttttaaattaattcaataattgatgtatctagttta-aaaatagattaaatacatcaactattgaatgaatcaaaaaa 40780285  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | || | ||||||||| ||||||| |||||||||||    
T  40780284 gtaaattgtttcttatatataggaccggagggagtat 40780248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 275
Target Start/End: Original strand, 2401053 - 2401129
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    ||||||| |||| ||||||||||||||||||| | ||| |||||||| | ||| | ||||||||| |||||||||||    
T  2401053 ttataagcaaaagttaactttttaaattcattcaataaatgatgtatttggtcaataatatagactaaatacatcat 2401129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 696490 - 696387
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| |||| |||| | ||| |||   ||||| ||||||||||| |||||||||||| |||| |||||| ||| |||| |||     
T  696490 cggtcctatttataagaaaaagttaatttttaagatttattatataattaatgtatcttgtttagaatatagactaaatccatcatttatgcaatgaatc 696391  T
Q  290 aaaa 293  Q
    ||||    
T  696390 aaaa 696387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 764788 - 764685
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| |||| |||| | ||| |||   ||||| ||||||||||| |||||||||||| |||| |||||| ||| |||| |||     
T  764788 cggtcctatttataagaaaaagttaatttttaagatttattatataattaatgtatcttgtttagaatatagactaaatccatcatttatgcaatgaatc 764689  T
Q  290 aaaa 293  Q
    ||||    
T  764688 aaaa 764685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 332
Target Start/End: Complemental strand, 30192036 - 30191894
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||  ||| |||||||| | ||||| | | ||||| ||||||||||  ||  |||| |||     
T  30192036 cggtcgtatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatc 30191937  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
     ||| | | || | |||||||||||||||||| || |||||||    
T  30191936 taaaaaatcaattttttcttataaataggactagacggagtat 30191894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 329
Target Start/End: Original strand, 19150793 - 19150870
Alignment:
Q  252 tagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaataggactggagggag 329  Q
    |||||||||||||||||||||||| ||| |||| |||  ||| | | |||| |||||||||||||||||  |||||||    
T  19150793 tagaatatagaccaaatacatcatttatgcaatgaatcgaaaaagtaaaatgtttcttataaataggaccagagggag 19150870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 25700461 - 25700546
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    |||||| ||||||||  ||| ||| |||||||| ||||||| ||||| |||||||| |  |||| ||||||||||| |||||||||    
T  25700461 cggtctcatttataaataaatttttactttttagattcattcagtaaatgatgtatgtgatctacaatatagaccacatacatcat 25700546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 2583216 - 2583128
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaat 284  Q
    |||||||||| ||||  | |||||||| |||||||| ||||||  | ||| ||||||| ||||||||||||||| ||||| ||| ||||    
T  2583216 tatttataaggaaaagattactttttagattcattgtgtaattattatattttgtctataatatagaccaaatatatcatttatgcaat 2583128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 275
Target Start/End: Original strand, 24100776 - 24100852
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    |||||||||| | ||||||||||| ||||||||| ||||| |||||||||||    ||||||||| | |||||||||    
T  24100776 ttataagaaataattaactttttagattcattgaataattaatgtatcttgttataaatatagactagatacatcat 24100852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 30206574 - 30206526
Alignment:
Q  224 attcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    ||||||||| |||||||||||||| || || ||||||||||||||||||    
T  30206574 attcattgaataattgatgtatctggtttataatatagaccaaatacat 30206526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 330
Target Start/End: Original strand, 53658372 - 53658512
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||  | | | |||||| | ||||| | | ||||| |||||||| |  ||||||||||||     
T  53658372 cggtcatatttataagaaatatttaactttttttattcattgtatgaataatgtatttggtctatattctagacaaaatacattagttatacaataaatc 53658471  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagt 330  Q
     ||| | |||| | |||||||||||||| || ||| |||||    
T  53658472 taaaaaattaactttttcttataaatagaaccggaaggagt 53658512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 24100935 - 24100884
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgt 250  Q
    |||||||||| | ||||||||||| ||||||||| ||||| |||||||||||    
T  24100935 ttataagaaataattaactttttagattcattgaataattaatgtatcttgt 24100884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 2643614 - 2643696
Alignment:
Q  188 ttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatac 270  Q
    ||||||| ||||||||||||| | || ||||||||  |||||||| ||||| |||||  | ||||| |||||| |||||||||    
T  2643614 ttcggtcctatttataagaaataattgactttttagtttcattgaataatttatgtacttagtctaaaatatacaccaaatac 2643696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 19150666 - 19150720
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgta 244  Q
    ||||| ||||||||||||||| || |||||||| ||| ||||||||||| |||||    
T  19150666 cggtcctatttataagaaaaagttgactttttagatttattgagtaattaatgta 19150720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 31853198 - 31853144
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtcta 253  Q
    ||||||||||||||| ||||||||  ||||||| |||| |||||||||| |||||    
T  31853198 ttataagaaaaatttgactttttaggttcattgtgtaagtgatgtatctagtcta 31853144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 52535962 - 52536016
Alignment:
Q  193 tcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatct 247  Q
    |||||||||||||||||| ||||||||||| || |||||| ||||  ||||||||    
T  52535962 tcttatttataagaaaaagttaactttttagatacattgaataatgtatgtatct 52536016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 52966412 - 52966466
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtcta 253  Q
    ||||||||||||||| ||||||||| |||||||  ||| |||||||||| |||||    
T  52966412 ttataagaaaaatttgactttttaagttcattgtataagtgatgtatctagtcta 52966466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 332
Target Start/End: Complemental strand, 29686531 - 29686398
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacattt 298  Q
    |||||||||| | |||| |||||||||||||||  ||||| |||||| ||||    ||||||||| | ||||||||| || ||||| ||   ||| | |     
T  29686531 ttataagaaacaattaattttttaaattcattgtataattaatgtatattgttataaatatagactagatacatcatttacacaatgaacctaaaaagtc 29686432  T
Q  299 aaatatttcttataaataggactggagggagtat 332  Q
    |||| ||||||||||  ||||| |||||||||||    
T  29686431 aaatgtttcttataataaggaccggagggagtat 29686398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 332
Target Start/End: Complemental strand, 33623011 - 33622878
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacattt 298  Q
    |||||||||||| || ||||||||  ||||| || ||||| ||||||||| |    |||||| || | |||||||| ||||||||| ||  |||| | ||    
T  33623011 ttataagaaaaaattgactttttacgttcatagaataattaatgtatcttattgtaaatataaactagatacatcacctatacaatgaaccaaaaaagtt 33622912  T
Q  299 aaatatttcttataaataggactggagggagtat 332  Q
    || | ||||||||||  ||||| |||||||||||    
T  33622911 aattgtttcttataataaggaccggagggagtat 33622878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 2e-42; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 190 - 326
Target Start/End: Original strand, 49944841 - 49944977
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||     
T  49944841 cggtcctatttataagaaaaatttaactttttagattcattgaataattgatgtatcttgtctagaatatagaccaaatacatcatttatacaatgaatc 49944940  T
Q  290 aaaacatttaaatatttcttataaataggactggagg 326  Q
    |||| | | |||| |||||| |||||||||| |||||    
T  49944941 aaaaaaatcaaatgtttcttgtaaataggaccggagg 49944977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 196 - 331
Target Start/End: Complemental strand, 519967 - 519832
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||| |    
T  519967 tatttataagaaaattttaactttttagattcattgagtaattgatgtatcttatctagaatatagatcaaatacatcatttatacaataaatcaaaaaa 519868  T
Q  296 tttaaatatttcttataaataggactggagggagta 331  Q
     | |||| ||| ||||||||||||| ||||||||||    
T  519867 gtcaaatgtttattataaataggaccggagggagta 519832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 190 - 319
Target Start/End: Complemental strand, 38738071 - 38737942
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| |||| |||     
T  38738071 cggtcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttgtctagaatataaaccaaatacatcctttatgcaatgaatc 38737972  T
Q  290 aaaacatttaaatatttcttataaatagga 319  Q
    |||| | | |||| ||||||||||||||||    
T  38737971 aaaaaagtcaaatgtttcttataaatagga 38737942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 190 - 333
Target Start/End: Complemental strand, 38040416 - 38040273
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| |||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||| |||| |||     
T  38040416 cggtcctatttataagaaaaatttgactttttagattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatgcaatgaatc 38040317  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    |||| | | |||| ||||||||||||||||| | ||||||||||    
T  38040316 aaaaaagtcaaatgtttcttataaataggaccgaagggagtata 38040273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 193 - 320
Target Start/End: Original strand, 34332487 - 34332614
Alignment:
Q  193 tcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaa 292  Q
    |||||| |||||||||| ||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||| |||    
T  34332487 tcttatatataagaaaactttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatccaatgaatcaaa 34332586  T
Q  293 acatttaaatatttcttataaataggac 320  Q
    | | | |||| |||||||||||||||||    
T  34332587 aaagtcaaatgtttcttataaataggac 34332614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 190 - 332
Target Start/End: Original strand, 26070832 - 26070974
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||  |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| |||| |||     
T  26070832 cggtcttatttataagtgaaatttgactttttagattcattgagtaattgatgtatcttatctagaatatagaccaaatacattatttatgcaatgaatc 26070931  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||| | | |||| ||||||||||||| ||| |||| ||||||    
T  26070932 aaaaaagtaaaatgtttcttataaataagaccggagagagtat 26070974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 186 - 326
Target Start/End: Complemental strand, 44939210 - 44939070
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaata 285  Q
    |||||| || ||||||||||| ||| || | |||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||     
T  44939210 ccttcgatcatatttataagagaaaattgattttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacatcatttatacaatg 44939111  T
Q  286 aattaaaacatttaaatatttcttataaataggactggagg 326  Q
    ||| |||| | | |||| ||||||||||||||||| |||||    
T  44939110 aataaaaaaagtcaaatgtttcttataaataggaccggagg 44939070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 190 - 332
Target Start/End: Original strand, 26924221 - 26924363
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| || |||||||||||||||||||| ||| |||||  | || |||||||||||||||||||||||| ||| |||| |||     
T  26924221 cggtcctatttataagaaaaagttgactttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttattcaatgaatc 26924320  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||| | | |||| ||||||||||||||||| |||||||||||    
T  26924321 aaaaaagtcaaatgtttcttataaataggaccggagggagtat 26924363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 15342957 - 15343074
Alignment:
Q  202 taagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaa 301  Q
    ||||||||| || | |||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||| ||| |||| ||| |||| | | |||    
T  15342957 taagaaaaagttgaatttttagattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaaatcaaa 15343056  T
Q  302 tatttcttataaatagga 319  Q
    ||||||||||||||||||    
T  15343057 tatttcttataaatagga 15343074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 50155438 - 50155335
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| || |||||||| |||||||||||||||||||||| | ||||| ||||||||||||||||||||| ||| |||| ||||    
T  50155438 cggtcctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtctataatatagaccaaatacatcatttatgcaatgaatt 50155339  T
Q  290 aaaa 293  Q
    ||||    
T  50155338 aaaa 50155335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 195 - 321
Target Start/End: Original strand, 640535 - 640660
Alignment:
Q  195 ttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaac 294  Q
    |||||||||||||||| || |||||||| |||||| |||||||||||||||||| |||| ||||||||| |||||||| || |||||||| ||| ||||     
T  640535 ttatttataagaaaaaattgactttttagattcat-gagtaattgatgtatcttatctaaaatatagactaaatacataatttatacaatgaatgaaaaa 640633  T
Q  295 atttaaatatttcttataaataggact 321  Q
    | |||||| |||| |||||||||||||    
T  640634 aattaaatgtttcatataaataggact 640660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 188 - 315
Target Start/End: Complemental strand, 37515232 - 37515105
Alignment:
Q  188 ttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaa 287  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||| |||||| ||  |||||||| || ||| |||||||    
T  37515232 ttcggtcctatttataagaaaaatttaactttttagattcattaagtaattaatgtatgttgtctggaatatggattaaatacattatttatgcaataaa 37515133  T
Q  288 ttaaaacatttaaatatttcttataaat 315  Q
    | |||| | |||||| ||| ||||||||    
T  37515132 taaaaaaagttaaatgttttttataaat 37515105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 190 - 320
Target Start/End: Complemental strand, 47912954 - 47912827
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||||| | ||||||||||| ||||  ||||| |||||||||||||||  |||||| ||||||||| || ||||||||||||     
T  47912954 cggtcctatttataagaaaaattga-ctttttaaatttattgtataattaatgtatcttgtctag--tatagatcaaatacattatttatacaataaatc 47912858  T
Q  290 aaaacatttaaatatttcttataaataggac 320  Q
    |||| | | ||||||||||||||||||||||    
T  47912857 aaaaaagtcaaatatttcttataaataggac 47912827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 190 - 320
Target Start/End: Complemental strand, 26760313 - 26760183
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| || | |||||||||||||||||| ||| |||||  | || |||||||||||||||||||||||| ||| |||| |||     
T  26760313 cggtcctatttataagaaaaaattgattttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttattcaatgaatc 26760214  T
Q  290 aaaacatttaaatatttcttataaataggac 320  Q
    |||| | | |||| |||||||||||||||||    
T  26760213 aaaaaagtcaaatgtttcttataaataggac 26760183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 196 - 284
Target Start/End: Original strand, 23923564 - 23923652
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaat 284  Q
    |||||||||||||||||| | |||||| ||||||||||||||| |||||| |||||||||||||||||||||| |||||| ||| ||||    
T  23923564 tatttataagaaaaatttgaatttttagattcattgagtaattaatgtatattgtctagaatatagaccaaatgcatcatttatgcaat 23923652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 191 - 331
Target Start/End: Complemental strand, 24305804 - 24305664
Alignment:
Q  191 ggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatta 290  Q
    |||| |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||| |||  ||||||||| ||| | || ||| |    
T  24305804 ggtcctatttagaagaaaaatttaattttttaaatttattgagtaattgatgtatcttgtatagaatataaaccttatacatcatttatgcgatgaataa 24305705  T
Q  291 aaacatttaaatatttcttataaataggactggagggagta 331  Q
    ||| | | |||||||| ||||||| || || |||| |||||    
T  24305704 aaaaaatcaaatattttttataaacagaaccggagagagta 24305664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 220 - 332
Target Start/End: Original strand, 37178948 - 37179060
Alignment:
Q  220 ttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaatagga 319  Q
    |||||||||||| |||||| |||||||||||||| ||||||||| ||||||||||| |||||||||||| |||| | | |||| |||||||||| ||||     
T  37178948 ttaaattcattgtgtaattaatgtatcttgtctaaaatatagactaaatacatcatttatacaataaatcaaaaaagtcaaatgtttcttataattaggg 37179047  T
Q  320 ctggagggagtat 332  Q
    | ||||| |||||    
T  37179048 ccggaggaagtat 37179060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 7375603 - 7375522
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatct 277  Q
    ||||||||||||||| || |||||||| |||||||| |||||| ||||||||||||||||||||| ||||||||| ||||||    
T  7375603 tatttataagaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctagaatataaaccaaatacttcatct 7375522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 217 - 332
Target Start/End: Complemental strand, 5891839 - 5891724
Alignment:
Q  217 tttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaata 316  Q
    |||||| ||||||||| ||||| || ||| | || | ||||||| ||||||||||| || ||| |||| |||||||| | ||||||||||||||||||||    
T  5891839 tttttatattcattgattaattaatatatttggtattgaatataaaccaaatacattatatatgcaattaattaaaaaagttaaatatttcttataaata 5891740  T
Q  317 ggactggagggagtat 332  Q
    |||| |||||||||||    
T  5891739 ggaccggagggagtat 5891724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 320
Target Start/End: Original strand, 11386162 - 11386292
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaa-attcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaat 288  Q
    ||||||| ||||||||||||| || | ||||| | ||||||||| |||||||||| ||| ||||||||||||||| ||||||||||| ||| |||| |||    
T  11386162 cggtcttttttataagaaaaaattgatttttttagattcattgaataattgatgtttctggtctagaatatagacgaaatacatcatttatgcaatgaat 11386261  T
Q  289 taaaacatttaaatatttcttataaataggac 320  Q
     |||| | | |||| |||||||||||||||||    
T  11386262 caaaa-agtcaaatgtttcttataaataggac 11386292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 38590202 - 38590124
Alignment:
Q  196 tatttataagaaaaat--ttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    |||||||||||||||   ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||    
T  38590202 tatttataagaaaaaaaattaactttttagattcattgagtaattgatgtatctggtatagaatatagaccaaatacat 38590124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 331
Target Start/End: Complemental strand, 43929491 - 43929345
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || |  ||||| ||||||||||||||||| ||||  ||    
T  43929491 tacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaa-atagaccaaatacatcaactatttaa 43929393  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagta 331  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||    
T  43929392 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 43929345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 331
Target Start/End: Complemental strand, 47678401 - 47678255
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||||||||||||| | ||||||| | ||||||||||| ||   |||||| ||||| ||||||||||| |||| |||    
T  47678401 tacctccggtcctatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaa-atagatcaaatacatcaactattcaa 47678303  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagta 331  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||    
T  47678302 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 47678255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 196 - 333
Target Start/End: Original strand, 34662696 - 34662832
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||| ||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||| ||| |||| |    
T  34662696 tatttataaaaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 34662794  T
Q  296 tttaaatatttcttataaataggactggagggagtata 333  Q
     | || | ||||||||| ||| ||| ||||||||||||    
T  34662795 gtaaattgtttcttatatataagaccggagggagtata 34662832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 190 - 320
Target Start/End: Original strand, 6793602 - 6793732
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||||| |||||  | || || | |||||  |||||||||||| ||| |||| |||     
T  6793602 cggtcttatttataagaaaaagttaattttttaaattcattgaataattaatgtacttagtatatattataggtcaaatacatcatttatgcaatgaatc 6793701  T
Q  290 aaaacatttaaatatttcttataaataggac 320  Q
    | || | |||||| |||||| ||||||||||    
T  6793702 ataaaagttaaatgtttcttttaaataggac 6793732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 199 - 331
Target Start/End: Original strand, 18744576 - 18744704
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacattt 298  Q
    |||||||||||| || |||||||| ||||||||| ||||||   ||| |  ||||||||||||||| |||||||||| ||| |||| ||| |||| | ||    
T  18744576 ttataagaaaaagttgactttttagattcattgaataattg---tatttgatctagaatatagacc-aatacatcatttatgcaatgaataaaaaaagtt 18744671  T
Q  299 aaatatttcttataaataggactggagggagta 331  Q
    |||| |||||| |||||||||| ||||||||||    
T  18744672 aaatgtttcttttaaataggaccggagggagta 18744704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 181 - 331
Target Start/End: Original strand, 47844533 - 47844682
Alignment:
Q  181 taataccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctata 280  Q
    |||||||| ||||| ||||||||||||||||||||||||| | ||||||| | ||||||||||| ||   |||||| ||||| |||||| |||| ||||     
T  47844533 taatacctccggtcctatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaa-atagatcaaatatatcaactatt 47844631  T
Q  281 caataaattaaaacatttaaatatttcttataaataggactggagggagta 331  Q
    |||| ||| |||| | | || | ||||||||| ||||||  ||||||||||    
T  47844632 caatgaatcaaaaaagtaaattgtttcttatatataggatcggagggagta 47844682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 6661549 - 6661642
Alignment:
Q  217 tttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttctta 310  Q
    |||||| ||||||| ||||||| ||||||||||| |||||||||||||||||||||||| ||| |||| ||| |||| | | |||| |||||||    
T  6661549 tttttagattcatttagtaattaatgtatcttgtatagaatatagaccaaatacatcatttatgcaattaatcaaaaaagtcaaatgtttctta 6661642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 325
Target Start/End: Complemental strand, 29256738 - 29256606
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| || |||||||| ||||||||||||||| |||| | | || || |||| |||||||||||||||| ||| |||| |||     
T  29256738 cggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtttttggtataaaata-agaccaaatacatcatttatgcaatgaatc 29256640  T
Q  290 aaaacatttaaatatttcttataaataggactggag 325  Q
    |||| |   |||| ||||||||||||||||| ||||    
T  29256639 aaaaaa--aaaatgtttcttataaataggaccggag 29256606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 193 - 331
Target Start/End: Complemental strand, 27819449 - 27819310
Alignment:
Q  193 tcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaat-acatcatctatacaataaattaa 291  Q
    ||||||||| |||||||||||||||||||| ||||||||| || ||| ||||| ||||||| |||||| | ||||| | ||||| |||  ||| ||| ||    
T  27819449 tcttatttacaagaaaaatttaactttttagattcattgaatatttggtgtattttgtctaaaatataaatcaaataatatcatttatgaaatgaatcaa 27819350  T
Q  292 aacatttaaatatttcttataaataggactggagggagta 331  Q
    || | | |||||||| ||||||||| ||| ||| ||||||    
T  27819349 aaaagtcaaatattttttataaataagaccggatggagta 27819310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 196 - 329
Target Start/End: Original strand, 8971242 - 8971375
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtc-tagaatatagaccaaatacatcatctatacaataaattaaaac 294  Q
    ||||||||||||||| |||| || ||| ||||||||||||||| |||||| ||| | ||||||||||| |||| || | || ||| |||| ||| ||||     
T  8971242 tatttataagaaaaaattaagttgttagattcattgagtaattaatgtat-ttgacatagaatatagatcaaacacgttatttatgcaatgaatcaaaaa 8971340  T
Q  295 atttaaatatttcttataaataggactggagggag 329  Q
    | | ||||||||||||||||||||||  |||||||    
T  8971341 agtcaaatatttcttataaataggacctgagggag 8971375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 23923408 - 23923470
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaata 258  Q
    |||||||||||||||||| | |||||| |||| |||| |||||||||||||||||||||||||    
T  23923408 tatttataagaaaaatttgaatttttagattcgttgaataattgatgtatcttgtctagaata 23923470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 293
Target Start/End: Original strand, 26823151 - 26823248
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaa 293  Q
    ||||||||| ||||| ||||||||||||||| ||||| ||||||||  ||||  |||||||||||||| || ||||||||  || |||||||| ||||    
T  26823151 tatttataataaaaaattaactttttaaatttattgaataattgatacatctaatctagaatatagacgaagtacatcattaatgcaataaatcaaaa 26823248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 47883976 - 47884065
Alignment:
Q  195 ttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaat 284  Q
    |||||||||||||||| || |||||||||||| ||| ||||||||||||||||| | ||  |||||||| ||||| || || ||||||||    
T  47883976 ttatttataagaaaaaattgactttttaaattaatttagtaattgatgtatcttatttaagatatagacaaaataaattatttatacaat 47884065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 316
Target Start/End: Complemental strand, 15286115 - 15286023
Alignment:
Q  224 attcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaata 316  Q
    ||||||||| ||||| |||||  | || ||||||||||| |||||||||||| |||| ||| |||||||| | | |||| |||||||||||||    
T  15286115 attcattgaataattaatgtacttggtatagaatatagatcaaatacatcatttatataatgaattaaaaaagtcaaatgtttcttataaata 15286023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 316
Target Start/End: Complemental strand, 2855217 - 2855099
Alignment:
Q  198 tttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatt 297  Q
    ||||||| ||| | || |||||||||||||||||  |||||||| ||||  ||||| |||||| | |||||| ||||||| | ||||||||| ||| | |    
T  2855217 tttataaaaaacaattgactttttaaattcattgtttaattgatatatcccgtctaaaatatatatcaaataaatcatctcttcaataaatttaaaaagt 2855118  T
Q  298 taaatatttcttataaata 316  Q
     || | |||||||||||||    
T  2855117 caattgtttcttataaata 2855099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 10015142 - 10015203
Alignment:
Q  213 taactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    ||||||||| |||||||||| ||| |||||||||  ||||| ||||||||||| ||||||||    
T  10015142 taactttttgaattcattgaataaatgatgtatccagtctaaaatatagaccagatacatca 10015203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 45848950 - 45849003
Alignment:
Q  193 tcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatc 246  Q
    |||||||||||||||| | ||||||||||| ||||||| | |||||||||||||    
T  45848950 tcttatttataagaaacaattaactttttatattcatttaataattgatgtatc 45849003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 15699481 - 15699569
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaa 287  Q
    ||||||||||  ||| | |||||| ||||||||||||||| |||||||||||    ||||||||| | ||||||||  |||||||||||    
T  15699481 ttataagaaacttttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttatacaataaa 15699569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 20273232 - 20273172
Alignment:
Q  214 aactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    |||||||| |||||||||| ||| |||||||||  ||||| ||||||||||| ||||||||    
T  20273232 aacttttttaattcattgaataaatgatgtatccagtctataatatagaccagatacatca 20273172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 34146938 - 34146819
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || | |||||  ||||||||| ||||| |||||| |  ||||||||||| | |||||||||||| | |  ||| ||| |||| |    
T  34146938 tatttataagaaaaaattgatttttttgattcattgaataattaatgtatttgatctagaatatatatcaaatacatcat-tttgtaatgaatcaaaaaa 34146840  T
Q  296 tttaaatatttcttataaata 316  Q
     |||||| |||||||||||||    
T  34146839 gttaaatgtttcttataaata 34146819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 28359062 - 28358995
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaat 257  Q
    ||||| |||||||||||||||  | | |||||||||||||||| ||||| |||||| | |||||||||    
T  28359062 cggtcctatttataagaaaaaaatgaatttttaaattcattgaataattaatgtatttggtctagaat 28358995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 199 - 293
Target Start/End: Original strand, 20273133 - 20273227
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaa 293  Q
    ||||||| ||||| | |||||| || ||  ||||||||||||||||||| ||||| | |||||||   ||||||||| ||| |||| ||||||||    
T  20273133 ttataagtaaaatcttacttttcaagtttcttgagtaattgatgtatctggtctatattatagactggatacatcatttattcaatgaattaaaa 20273227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 275
Target Start/End: Original strand, 15351747 - 15351804
Alignment:
Q  218 ttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    ||||||||||||| | ||| |||||||| ||||||| |||| |||||| |||||||||    
T  15351747 ttttaaattcattcaataaatgatgtatgttgtctacaataaagaccacatacatcat 15351804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 332
Target Start/End: Complemental strand, 27687972 - 27687839
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacattt 298  Q
    |||||||||||| |||||||||||| || || || ||||| ||||||||| |    ||||||||| | ||||||||  || | ||| || ||||| |||     
T  27687972 ttataagaaaaaattaactttttaagtttatagaataattaatgtatcttattgtaaatatagactagatacatcacttacataatgaactaaaaaattc 27687873  T
Q  299 aaatatttcttataaataggactggagggagtat 332  Q
    || ||||||||||||  || || |||||||||||    
T  27687872 aattatttcttataataagaaccggagggagtat 27687839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 39748630 - 39748687
Alignment:
Q  193 tcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgt 250  Q
    |||||||||||||||| |||| ||||||| |||||||||  ||| |||||||| ||||    
T  39748630 tcttatttataagaaatatttgacttttttaattcattgcataaatgatgtattttgt 39748687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 255 - 316
Target Start/End: Complemental strand, 39748694 - 39748633
Alignment:
Q  255 aatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaata 316  Q
    |||||| || ||||||||||| ||| |||| |||||||| | | ||||||||||||||||||    
T  39748694 aatatatacaaaatacatcatttatgcaatgaattaaaaaagtcaaatatttcttataaata 39748633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 7e-42; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 186 - 333
Target Start/End: Complemental strand, 11668159 - 11668012
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaata 285  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||| ||||     
T  11668159 ccttcggtcctatttataagaaaaatttgactttttacattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatgcaatg 11668060  T
Q  286 aattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    ||| |||| | | |||| ||||||||||||||||| ||||||||||||    
T  11668059 aatcaaaaaagtcaaatgtttcttataaataggaccggagggagtata 11668012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 8566227 - 8566099
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||||||||| |||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  8566227 taccttcggtcctatttataagaaaaatttgattttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaa 8566128  T
Q  284 taaattaaaacatttaaatatttcttata 312  Q
    | ||| |||| | |||||| |||||||||    
T  8566127 tgaatcaaaaaagttaaatgtttcttata 8566099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 196 - 332
Target Start/End: Complemental strand, 28677451 - 28677315
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| |||| |    
T  28677451 tatttataagaaaaaattgactttttagatttattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaa 28677352  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | |||| ||||||||||||||||| |||||||||||    
T  28677351 gtcaaatgtttcttataaataggaccggagggagtat 28677315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 196 - 332
Target Start/End: Complemental strand, 36245510 - 36245374
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| |||| |    
T  36245510 tatttataagaaaaaattgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaa 36245411  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | |||| ||||||||||| ||||| |||||||||||    
T  36245410 gtcaaatgtttcttataaacaggaccggagggagtat 36245374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 198 - 332
Target Start/End: Complemental strand, 45441568 - 45441434
Alignment:
Q  198 tttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatt 297  Q
    ||||||| ||||| ||||||||||| ||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| | |    
T  45441568 tttataaaaaaaaattaactttttagattcaatgaataattggtgtatcttgtctagaatatagatcaaatacatcatctatacaataaatcaaaaaagt 45441469  T
Q  298 taaatatttcttataaataggactggagggagtat 332  Q
     ||||||||| |||||||||||| |||| ||||||    
T  45441468 caaatatttcatataaataggaccggagcgagtat 45441434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 193 - 333
Target Start/End: Original strand, 10462388 - 10462527
Alignment:
Q  193 tcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaa 292  Q
    ||||||||||||||||||| | |||||||| ||||||||||| |||||||||||||||||| |||||| |||||||||||||| ||| |||| || ||||    
T  10462388 tcttatttataagaaaaatgtgactttttagattcattgagtgattgatgtatcttgtctaaaatatataccaaatacatcatttatgcaatgaa-taaa 10462486  T
Q  293 acatttaaatatttcttataaataggactggagggagtata 333  Q
    | || | ||| |||||||||||||| |||||||||||||||    
T  10462487 aaatgtcaatgtttcttataaatagaactggagggagtata 10462527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 30869325 - 30869223
Alignment:
Q  191 ggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatta 290  Q
    |||| |||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |    
T  30869325 ggtcctatttataagaaaattttgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacattatttatacaataaatca 30869226  T
Q  291 aaa 293  Q
    |||    
T  30869225 aaa 30869223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 199 - 331
Target Start/End: Original strand, 45533247 - 45533379
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacattt 298  Q
    |||||||||||| || |||||||| |||||||  |||||| ||||||||||||||||||||||||||||||||| || |||||||| |||||||| | |     
T  45533247 ttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctagaatatagaccaaatacattatttatacaatgaattaaaaaagtc 45533346  T
Q  299 aaatatttcttataaataggactggagggagta 331  Q
    |||| ||||||||||||| ||| ||||| ||||    
T  45533347 aaatgtttcttataaataagacaggaggaagta 45533379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 194 - 316
Target Start/End: Complemental strand, 9979936 - 9979815
Alignment:
Q  194 cttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaa 293  Q
    |||||||||||||||||||| |||||||| ||| ||||||||||| |||||||||||||||||||| ||| ||||||||||| |||  ||||||| ||||    
T  9979936 cttatttataagaaaaatttgactttttagatttattgagtaattcatgtatcttgtctagaatattgactaaatacatcatttat-gaataaatcaaaa 9979838  T
Q  294 catttaaatatttcttataaata 316  Q
     | | ||||||||||||||||||    
T  9979837 tagtcaaatatttcttataaata 9979815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 197 - 293
Target Start/End: Original strand, 2610202 - 2610298
Alignment:
Q  197 atttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaa 293  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||| ||| |||| ||||||||    
T  2610202 atttataagaaaaatttgattttttaaattcattgagtaattgatgtatttggtctagaatatagactaaatacatcatttatgcaatgaattaaaa 2610298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 190 - 332
Target Start/End: Original strand, 41850604 - 41850746
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||||||| |||| |||||| ||||||||| ||||| |||||| | || || |||||||| |||||||||||| ||| |||| |||     
T  41850604 cggtcttatttataagaaaaagttaattttttagattcattgaataattaatgtatttggtataaaatatagagcaaatacatcatttatgcaatgaatc 41850703  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||| | | |||| ||||||||||||||||| ||| |||||||    
T  41850704 aaaaaagtaaaatgtttcttataaataggaccggatggagtat 41850746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 34118069 - 34117985
Alignment:
Q  200 tataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaat 284  Q
    ||||||||||| || ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||| ||||    
T  34118069 tataagaaaaagttgactttttaaattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaat 34117985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 6838385 - 6838509
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||||||   |||| |  |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| |||     
T  6838385 cggtcatatttataagaaaaatttggtttttga--ttcattgagtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatc 6838482  T
Q  290 aaaacatttaaatatttcttataaata 316  Q
    |||| | | |||| |||||||||||||    
T  6838483 aaaaaagtcaaatgtttcttataaata 6838509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 186 - 320
Target Start/End: Complemental strand, 39153429 - 39153297
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaata 285  Q
    ||||||||||||||||||| ||||  || ||||||||  ||||||||||||||||||||| | ||||| ||||||||| ||||||||||| ||| ||||     
T  39153429 ccttcggtcttatttataaaaaaa--ttgactttttagcttcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatg 39153332  T
Q  286 aattaaaacatttaaatatttcttataaataggac 320  Q
    ||| |||| | | |||| |||||||||||||||||    
T  39153331 aatcaaaaaagtcaaatgtttcttataaataggac 39153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 184 - 333
Target Start/End: Complemental strand, 27231979 - 27231831
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  27231979 tacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 27231881  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||  ||||||| ||||||||||||    
T  27231880 tgaatcaaaaaagtaaattgtttcttatgtataggaccggagggagtata 27231831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 200 - 320
Target Start/End: Complemental strand, 29365751 - 29365631
Alignment:
Q  200 tataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacattta 299  Q
    ||||||||||| || |||||||| ||||||||||||||| |||||| | || ||||||||||| |||||||||||| ||| ||||  ||||||| | | |    
T  29365751 tataagaaaaaattgactttttagattcattgagtaattaatgtatttggtatagaatatagatcaaatacatcatttatgcaatgtattaaaaaagtca 29365652  T
Q  300 aatatttcttataaataggac 320  Q
    ||| |||||||||||||||||    
T  29365651 aatgtttcttataaataggac 29365631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 190 - 333
Target Start/End: Original strand, 13807250 - 13807389
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||||    ||||| | ||||||||||| |||||| ||||| |||  ||| |||     
T  13807250 cggtcttatttataagaaaaagttgactttttagattcattgagtaattg----atcttctttagaatatagatcaaatatatcatttatgtaatgaatc 13807345  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    |||| | | |||| |||||||||||||| || ||||||||||||    
T  13807346 aaaaaagtcaaatgtttcttataaatagaaccggagggagtata 13807389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 191 - 325
Target Start/End: Original strand, 48082808 - 48082941
Alignment:
Q  191 ggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatta 290  Q
    |||||||||||||||||||| || |||||||| |||||||| |||||| ||||||| ||| ||||||||||| |||||||| ||| |||  ||| ||| |    
T  48082808 ggtcttatttataagaaaaagttgactttttagattcattgtgtaattaatgtatcatgtgtagaatataga-caaatacaccatttatgtaatgaataa 48082906  T
Q  291 aaacatttaaatatttcttataaataggactggag 325  Q
    ||| | | |||||||| ||||||||||||| ||||    
T  48082907 aaaaagtcaaatatttattataaataggaccggag 48082941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 190 - 332
Target Start/End: Complemental strand, 10007716 - 10007572
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaat- 288  Q
    ||||| ||||||||||||||| || |||||||| ||||||||  ||||| ||||||||||| ||||||||||||||||||||| || |||  ||| |||     
T  10007716 cggtcctatttataagaaaaagttgactttttagattcattgtataattaatgtatcttgtgtagaatatagaccaaatacataatttatgaaatgaata 10007617  T
Q  289 -taaaacatttaaatatttcttataaataggactggagggagtat 332  Q
      |||| | | |||| ||| ||||||||||||| |||||||||||    
T  10007616 aaaaaaaagtcaaatgtttattataaataggacaggagggagtat 10007572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 196 - 332
Target Start/End: Original strand, 4826776 - 4826911
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| ||||||||||| ||||||| | |||||||||||  | | |||||| ||||||||||||||||| |||| |||| ||| |||| |    
T  4826776 tatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 4826874  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | || | ||||||||| ||||||| |||||||||||    
T  4826875 gtaaattgtttcttatatataggaccggagggagtat 4826911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 196 - 288
Target Start/End: Original strand, 4925905 - 4925997
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaat 288  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||||| |||||||| ||||||||| ||||| ||||| | | ||||||||    
T  4925905 tatttataagaaaaatttgactttttagattcattaagtaattgatgtaacttgtctaaaatatagactaaatatatcatttgtgcaataaat 4925997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 184 - 332
Target Start/End: Original strand, 31227495 - 31227642
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||||||||||||||||||| |||| |||||| ||||||| | || ||||||||| | | |||||| ||||||||||||||||| |||| |||    
T  31227495 tacctccggtcttatttataagaaaaagttaattttttagattcattcaatagttgatgtatttagcctagaa-atagaccaaatacatcaactattcaa 31227593  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    | ||| |||| | | || | ||||||||| |||||| | ||||||||||    
T  31227594 tgaatcaaaaaagtaaattgtttcttatatataggattagagggagtat 31227642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 44682574 - 44682677
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| |||||||||||||||||| |||||| | ||||||| ||||| |||||||| ||||||||| ||||||||||||| ||||| ||| |||| |||     
T  44682574 cggtcctatttataagaaaaatttgacttttgagattcattaagtaactgatgtattttgtctagattatagaccaaatatatcatttatgcaatgaatc 44682673  T
Q  290 aaaa 293  Q
    ||||    
T  44682674 aaaa 44682677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 184 - 326
Target Start/End: Complemental strand, 1366740 - 1366599
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||||||||||| ||||||| ||||||||||| ||||||| | ||||||||||| || ||  |||| ||||||||||||||||| |||| |||    
T  1366740 tacctccggtcttatttatcagaaaaagttaactttttagattcattcaataattgatgtacctagttcagaa-atagaccaaatacatcaactattcaa 1366642  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagg 326  Q
    | ||| |||| | | || | ||||||||| ||||||| |||||    
T  1366641 tgaatcaaaaaagtaaattgtttcttatatataggaccggagg 1366599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 24163276 - 24163418
Alignment:
Q  190 cggtcttatttataagaaaaat-ttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaat 288  Q
    ||||| |||||||| ||||||  || |||||||| ||||||||  ||||| ||||||||||  |||||||||||||| ||||||||| ||| |||| |||    
T  24163276 cggtcctatttataggaaaaaaatttactttttagattcattgtataattaatgtatcttgcgtagaatatagaccatatacatcatttatgcaatgaat 24163375  T
Q  289 taaaacatttaaatatttcttataaataggactggagggagta 331  Q
    ||||| | | |||| ||||||||||||||| | |||| |||||    
T  24163376 taaaaaagtgaaatgtttcttataaataggtccggagagagta 24163418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 190 - 332
Target Start/End: Complemental strand, 32811517 - 32811376
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| |||| |||||| ||||||| ||||||||||||| || | |||||| |||||||||||||||||  ||| |||| |||     
T  32811517 cggtcctatttataagaaaaagttaattttttagattcattcagtaattgatgtacctagcctagaa-atagaccaaatacatcaattattcaatgaatc 32811419  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||| | | || | ||||||||| ||||||  |||||||||||    
T  32811418 aaaaaagtaaattgtttcttatatataggatcggagggagtat 32811376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 186 - 275
Target Start/End: Complemental strand, 32811853 - 32811764
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    |||||||||  |||||||||||||| |||| |||||| |||||||||||||||||| ||| | || |||||||| |||||||||||||||    
T  32811853 ccttcggtccaatttataagaaaaaattaattttttagattcattgagtaattgatttatatggtatagaatatggaccaaatacatcat 32811764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 190 - 325
Target Start/End: Complemental strand, 2523910 - 2523775
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtc-tagaatatagaccaaatacatcatctatacaataaat 288  Q
    ||||| ||||||||||||||| || |||||||| ||||||||||||||| ||||| |||| | |||||||||||||| ||||||| | ||| |||| |||    
T  2523910 cggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgta-cttggcatagaatatagaccagatacatcgtttatgcaatgaat 2523812  T
Q  289 taaaacatttaaatatttcttataaataggactggag 325  Q
     |||| | | |||| ||||||||||||| ||| ||||    
T  2523811 caaaaaagtcaaatgtttcttataaataagaccggag 2523775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 30823723 - 30823843
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    |||||||||||||| ||| |||||||| |||||||||| |||| |||||| | || ||||||||||||||||||||| || |||| ||| ||| ||||      
T  30823723 tatttataagaaaattttgactttttagattcattgagaaattaatgtatttggtatagaatatagaccaaatacattatttatataatgaataaaaaat 30823822  T
Q  296 tttaaatatttcttataaata 316  Q
     | |||||||| |||||||||    
T  30823823 atcaaatattttttataaata 30823843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 2680993 - 2680869
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttg-tctagaatatagaccaaatacatcatctatacaataaattaaaac 294  Q
    ||||||||| ||||| || |||||||| ||| ||||  ||||  |||||||||  ||||||||||||| |||||||||||| |||| ||| ||| ||||     
T  2680993 tatttataaaaaaaagttgactttttagatttattgtataatgaatgtatctttctctagaatatagatcaaatacatcatttatataatgaatcaaaaa 2680894  T
Q  295 atttaaatatttcttataaatagga 319  Q
    | | |||||||||||||||||||||    
T  2680893 agtcaaatatttcttataaatagga 2680869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 5470185 - 5470264
Alignment:
Q  23 cccaccattaatagagaaagtttttctgaggatgaagttgatatgattctaaggttacacaagctcctagggaacaggta 102  Q
    |||| ||| |||||| |||| |||||||||||||||||||||||||| |||||||||||||| ||| |||| || |||||    
T  5470185 cccaacatcaatagaaaaagcttttctgaggatgaagttgatatgatcctaaggttacacaaactcttaggaaataggta 5470264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 2400067 - 2399966
Alignment:
Q  215 actttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaa 314  Q
    ||||||||  ||| |||| |||||||||||||| ||||| ||||||||  ||||||||||| |||||||| ||| |||| | | |||| |||||||||||    
T  2400067 actttttaggttcgttgaataattgatgtatctagtctaaaatatagattaaatacatcatttatacaatgaatcaaaaaagtcaaatgtttcttataaa 2399968  T
Q  315 ta 316  Q
    ||    
T  2399967 ta 2399966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 217 - 314
Target Start/End: Original strand, 48838347 - 48838444
Alignment:
Q  217 tttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaa 314  Q
    |||||| |||||||||| |||| |||||| | || || ||||||||||||||||||||| |||  ||| |||||||| | |||||| |||||||||||    
T  48838347 tttttagattcattgagcaattaatgtatttggtataaaatatagaccaaatacatcatttatgtaatgaattaaaaaagttaaatgtttcttataaa 48838444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 215 - 339
Target Start/End: Complemental strand, 7456534 - 7456410
Alignment:
Q  215 actttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaa 314  Q
    |||||||| ||||||||||||||| |||||||||||    ||||||||| | ||||||||| |||||||| |||  ||| | | |||||||||||||||     
T  7456534 actttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcatttatacaatgaatctaaaaagtcaaatatttcttataat 7456435  T
Q  315 taggactggagggagtatagttttt 339  Q
     ||||| |||| || |||| |||||    
T  7456434 aaggaccggagcgaatatatttttt 7456410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 41863725 - 41863661
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgt 250  Q
    ||||||||  ||||||||||||||| || ||||||||||||||||| |||||| |||||||||||    
T  41863725 ccttcggttctatttataagaaaaaattgactttttaaattcattgtgtaattaatgtatcttgt 41863661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 329
Target Start/End: Complemental strand, 28020139 - 28020002
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||| ||||||| |  |||||| ||||||| | |||||| |||||||   |||||| ||||||||||||||||| |||| |||| |||     
T  28020139 cggtcttatttataaaaaaaattgat-tttttagattcattaaataattgttgtatctgacctagaa-atagaccaaatacatcaactattcaatgaatc 28020042  T
Q  290 aaaacatttaaatatttcttataaataggactggagggag 329  Q
    |||| | | || | |||||||||||||||||  |||||||    
T  28020041 aaaaaagtaaattgtttcttataaataggaccagagggag 28020002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 43174299 - 43174358
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctaga 255  Q
    |||||||||||||| |||||||||||| ||| ||| | ||||||||||||||||||||||    
T  43174299 tatttataagaaaattttaactttttagattaattaaataattgatgtatcttgtctaga 43174358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 189 - 284
Target Start/End: Complemental strand, 27163302 - 27163207
Alignment:
Q  189 tcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaat 284  Q
    ||||||||||||||||| ||| ||| |||||||| ||||| | | ||| |||||||| | || || ||||||||||| ||||||||| ||| ||||    
T  27163302 tcggtcttatttataagtaaattttcactttttagattcactaaataaatgatgtatgtggtttataatatagaccacatacatcatttattcaat 27163207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 191 - 274
Target Start/End: Original strand, 39153296 - 39153379
Alignment:
Q  191 ggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    |||| ||||||||||||| |||| |||||||  ||||||||  ||| |||||||| | ||||| | ||||||||||||||||||    
T  39153296 ggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatca 39153379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 40142913 - 40142810
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||| ||||||||||| || | |||||| ||| ||||  ||||| ||||||||||| ||| ||||||||||||||||| || ||| |||| |||     
T  40142913 cggtcctatgtataagaaaaaattgattttttagatttattgtataattaatgtatcttgtttaggatatagaccaaatacattatttatgcaatgaatc 40142814  T
Q  290 aaaa 293  Q
    ||||    
T  40142813 aaaa 40142810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 293
Target Start/End: Original strand, 47987196 - 47987261
Alignment:
Q  228 attgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaa 293  Q
    ||||| |||||||| |||||||| |||| |||| |||||||||||||| ||| |||| ||||||||    
T  47987196 attgaataattgatatatcttgtttagagtataaaccaaatacatcatttatgcaatgaattaaaa 47987261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 12426538 - 12426618
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatac 270  Q
    ||||||||||||||||| ||| |||| |||||| || |||||| ||||  |||||||| ||| ||||| || |||||||||    
T  12426538 cggtcttatttataagagaaagttaattttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatac 12426618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 325
Target Start/End: Complemental strand, 2610326 - 2610192
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||||| | | || ||||||| |||||||  ||| |||||||| | ||||| | | ||||||||||||||||  ||  |||| ||||    
T  2610326 cggtcttatttataagaaacaatgaattttttaa-ttcattgcataaatgatgtatttagtctatattctagaccaaatacatcaattactcaatgaatt 2610228  T
Q  290 aaaacatttaaatatttcttataaataggactggag 325  Q
     ||| | | |||| |||||||||||| |||| ||||    
T  2610227 taaaaaatcaaatttttcttataaatcggaccggag 2610192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 275
Target Start/End: Original strand, 45981022 - 45981100
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    ||||||||||||||| || |||||| ||||||||||| ||| | ||||||||  |||||| |||| || |||||||||||    
T  45981022 tatttataagaaaaaattgactttt-aaattcattgaataactcatgtatctgatctagagtatatacaaaatacatcat 45981100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 16861517 - 16861575
Alignment:
Q  187 cttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtat 245  Q
    |||||||||||| ||||| ||| | || |||||||| ||||||||| ||||||||||||    
T  16861517 cttcggtcttatatataaaaaacaattgactttttagattcattgaataattgatgtat 16861575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 200 - 274
Target Start/End: Original strand, 18064740 - 18064814
Alignment:
Q  200 tataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    ||||||||||| |||||||||||| ||||| || ||||| ||||||||| |  | ||||||||| | ||||||||    
T  18064740 tataagaaaaagttaactttttaagttcatagaataattaatgtatcttattgaaaatatagactagatacatca 18064814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 28063726 - 28063684
Alignment:
Q  212 ttaactttttaaattcattgagtaattgatgtatcttgtctag 254  Q
    |||||||||||||||||||| |||||| ||||||| |||||||    
T  28063726 ttaactttttaaattcattgtgtaattaatgtatcctgtctag 28063684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 41395793 - 41395679
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacattt 298  Q
    |||||||||||| || |||||||| |||||| || ||||| || |||||| |    ||||||||| | ||||||||  |||||||| |||||||| | ||    
T  41395793 ttataagaaaaagttgactttttagattcatagaataattaatatatcttattataaatatagactagatacatcacttatacaatgaattaaaaaagtt 41395694  T
Q  299 aaatatttcttataa 313  Q
    || | ||||||||||    
T  41395693 aattgtttcttataa 41395679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 47942971 - 47942841
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    |||||||||||||  ||| |||||||||||| ||| | ||||| |||||| ||||||| |||||| |  ||||| || ||  ||||||| ||| |||| |    
T  47942971 tatttataagaaatttttgactttttaaatttattaaataattaatgtattttgtctaaaatataaattaaatatattattcatacaatgaatcaaaaaa 47942872  T
Q  296 tttaaatatttcttataaataggactggagg 326  Q
     | ||||||||  |||||||| ||| |||||    
T  47942871 gtgaaatattttatataaataagaccggagg 47942841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 47948401 - 47948271
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    |||||||||||||  ||| |||||||||||| ||| | ||||| |||||| ||||||| |||||| |  ||||| || ||  ||||||| ||| |||| |    
T  47948401 tatttataagaaatttttgactttttaaatttattaaataattaatgtattttgtctaaaatataaattaaatatattattcatacaatgaatcaaaaaa 47948302  T
Q  296 tttaaatatttcttataaataggactggagg 326  Q
     | ||||||||  |||||||| ||| |||||    
T  47948301 gtgaaatattttatataaataagaccggagg 47948271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 19512749 - 19512802
Alignment:
Q  200 tataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtcta 253  Q
    ||||||||| | || |||||||||||||||||| ||||||| |||||| |||||    
T  19512749 tataagaaacaattgactttttaaattcattgaataattgacgtatctagtcta 19512802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 28677325 - 28677466
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||| |||| |||||||  ||||||||  ||| |||||||| | ||||| | | ||||| | ||||||||  ||  ||||||||     
T  28677325 cggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaataaatc 28677424  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagta 331  Q
     ||| | | || | ||||||||||||||||  ||||||||||    
T  28677425 taaaaagtcaattttttcttataaataggatcggagggagta 28677466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 40176160 - 40176091
Alignment:
Q  206 aaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    ||||| || |||||||| ||||||| || |||| |||||  | || ||||||||||||||||||||||||    
T  40176160 aaaaaattgactttttagattcattaagaaattaatgtacttggtttagaatatagaccaaatacatcat 40176091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 313
Target Start/End: Original strand, 45123263 - 45123376
Alignment:
Q  200 tataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacattta 299  Q
    ||||| ||||| || ||||||||||||||| || ||||| ||||||||| |    ||||||||  | ||||||||  |||||||| ||| |||| | |||    
T  45123263 tataaaaaaaagttgactttttaaattcatagaataattaatgtatcttattataaatatagattagatacatcacttatacaatgaatcaaaaaagtta 45123362  T
Q  300 aatatttcttataa 313  Q
    | ||||||||||||    
T  45123363 attatttcttataa 45123376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 1e-40; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 190 - 319
Target Start/End: Original strand, 5031472 - 5031601
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| |||| |||     
T  5031472 cggtcctatttataagaaaaatttaactttttaaattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatc 5031571  T
Q  290 aaaacatttaaatatttcttataaatagga 319  Q
    |||| | | |||| ||||||||||||||||    
T  5031572 aaaaaagtcaaatgtttcttataaatagga 5031601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 196 - 331
Target Start/End: Complemental strand, 40483417 - 40483282
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||| |||||||||| ||||||| |||| |||||||||||||| |||||| |||||||||| ||||||||||||||| ||| |||| |||||||| |    
T  40483417 tatttattagaaaaatttgactttttcaatttattgagtaattgatatatcttatctagaatatggaccaaatacatcatttatgcaatgaattaaaaaa 40483318  T
Q  296 tttaaatatttcttataaataggactggagggagta 331  Q
     |||||||||||||||||||||||| ||||| ||||    
T  40483317 gttaaatatttcttataaataggaccggaggtagta 40483282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 197 - 332
Target Start/End: Complemental strand, 16448922 - 16448787
Alignment:
Q  197 atttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacat 296  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||| ||||| ||| |||| ||| |||| |     
T  16448922 atttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatatagaatataaaccaaatatatcatttatgcaatgaatcaaaaaag 16448823  T
Q  297 ttaaatatttcttataaataggactggagggagtat 332  Q
    | |||| ||||||||||||||||| ||||| |||||    
T  16448822 tcaaatgtttcttataaataggaccggaggaagtat 16448787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 190 - 332
Target Start/End: Complemental strand, 42123108 - 42122964
Alignment:
Q  190 cggtcttatttataagaaaaat--ttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaa 287  Q
    ||||||||||||||| |||||   || |||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||| |||| ||    
T  42123108 cggtcttatttataaaaaaaaaaattgactttttagattcattgagtaattaatgtatcttgtctagaatatataccaaatacatcatttatgcaatgaa 42123009  T
Q  288 ttaaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    | |||| | | |||  |||||||||||||||||||||||||||||    
T  42123008 tcaaaaaagtcaaacgtttcttataaataggactggagggagtat 42122964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 193 - 331
Target Start/End: Original strand, 3236343 - 3236479
Alignment:
Q  193 tcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaa 292  Q
    ||||||||||  |||||| || |||||||||||||||||| |||||||||||||| || || ||| ||||||||||||||||| |||||||| |||||||    
T  3236343 tcttatttat--gaaaaaattgactttttaaattcattgaataattgatgtatctagtttaaaatttagaccaaatacatcatttatacaatgaattaaa 3236440  T
Q  293 acatttaaatatttcttataaataggactggagggagta 331  Q
    | | | |||||||||||||||||| ||| ||||||||||    
T  3236441 aaagtcaaatatttcttataaatatgaccggagggagta 3236479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 186 - 320
Target Start/End: Complemental strand, 35149812 - 35149678
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaata 285  Q
    ||||||||| ||||||||||||||| || | |||||| ||| |||| |||||| |||||||||||||||||||||||||||||||||||| ||| ||||     
T  35149812 ccttcggtcctatttataagaaaaagttgattttttagatttattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatt 35149713  T
Q  286 aattaaaacatttaaatatttcttataaataggac 320  Q
    ||| |||| | | |||| |||||||||||||||||    
T  35149712 aatcaaaaaagtcaaatgtttcttataaataggac 35149678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 190 - 332
Target Start/End: Complemental strand, 7693173 - 7693031
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| || |||||||| ||||||||||||||| |||||| | || || ||||||||| ||||||||||| ||| |||| |||     
T  7693173 cggtcctatttataagaaaaaattgactttttagattcattgagtaattaatgtatttggtataaaatatagactaaatacatcatttatgcaatgaatc 7693074  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||| | | |||| |||||||||||||||| ||||||||||||    
T  7693073 aaaaaagtaaaatgtttcttataaataggattggagggagtat 7693031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 190 - 332
Target Start/End: Original strand, 8803236 - 8803378
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| |||||| |||||||| ||||||||||| ||| |||  |||||| |||||||||||||||||||||||||||||||||||| |||  ||| |||     
T  8803236 cggtcatatttacaagaaaaagttaactttttatatttattatgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgtaatgaatc 8803335  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||| | |||||||||| ||||||||||||  ||||| |||||    
T  8803336 aaaaaagttaaatattttttataaataggatcggaggaagtat 8803378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 43332568 - 43332710
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagac-caaatacatcatctatacaataaat 288  Q
    ||||| |||||||||||||| ||| |||||||| ||||||||||||||| || |||||||||||||||  ||||  ||| ||||||| ||| |||| |||    
T  43332568 cggtcctatttataagaaaattttgactttttagattcattgagtaattaatatatcttgtctagaatgaagacaaaaaaacatcatttatgcaatgaat 43332667  T
Q  289 taaaacatttaaatatttcttataaataggactggagggagta 331  Q
     |||| | | |||||||| ||||||||||||||||||||||||    
T  43332668 caaaaaaatcaaatattttttataaataggactggagggagta 43332710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 196 - 333
Target Start/End: Original strand, 10839777 - 10839913
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || |||||||| ||||||||| ||||| |||||  | || |||||||||||||||||||||||| ||| |||| ||| |||| |    
T  10839777 tatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatatagaccaaatacatcatttatgcaatgaatcaaaa-a 10839875  T
Q  296 tttaaatatttcttataaataggactggagggagtata 333  Q
     |||||| ||||||||||||||||| ||| ||||||||    
T  10839876 gttaaatgtttcttataaataggaccggatggagtata 10839913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 196 - 332
Target Start/End: Original strand, 8793733 - 8793869
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    |||||||||| |||| || |  ||||| |||||||||||||||||||||| | ||||| ||||||||| ||||||||||| ||| |||| ||| |||| |    
T  8793733 tatttataagtaaaagttgatattttagattcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatgaatcaaaaaa 8793832  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | |||||||||||||||||||||| |||| ||||||    
T  8793833 gtcaaatatttcttataaataggaccggagagagtat 8793869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 196 - 332
Target Start/End: Complemental strand, 15726893 - 15726758
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || |||||||| |||||||||||||||||  |||||||| || |||||| || ||||||||||| ||| | ||||||||||| |    
T  15726893 tatttataagaaaaaattgactttttagattcattgagtaattgacttatcttgtttaaaatatatacaaaatacatcatttatgcgataaattaaaa-a 15726795  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | |||||||||||||||||||||  ||||| |||||    
T  15726794 atcaaatatttcttataaataggatcggaggaagtat 15726758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 190 - 317
Target Start/End: Complemental strand, 16008663 - 16008536
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||| |||||||||||||| |||| ||| ||| |||||||| ||||||||| ||||||||||||| |||||||||||| || ||| ||||| |||    
T  16008663 cggtcctatctataagaaaaatttgacttcttagatttattgagtacttgatgtattttgtctagaatattgaccaaatacattatttatgcaatagatt 16008564  T
Q  290 aaaacatttaaatatttcttataaatag 317  Q
    |||| | | |||| ||||||||||||||    
T  16008563 aaaaaagtcaaatgtttcttataaatag 16008536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 192 - 332
Target Start/End: Original strand, 34711091 - 34711230
Alignment:
Q  192 gtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaa 291  Q
    ||||||||||||| ||||| || |||||||| |||||||||||||||||||||| ||||||| |||||| || |||||||||||  || |||||||| ||    
T  34711091 gtcttatttataaaaaaaaattgactttttagattcattgagtaattgatgtattttgtctaaaatataaactaaatacatcattaatgcaataaatcaa 34711190  T
Q  292 aacatttaaatatttcttataaataggactggagggagtat 332  Q
    || | || ||| ||| |||||||||| || |||| ||||||    
T  34711191 aaaagtt-aattttttttataaatagaaccggagagagtat 34711230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 196 - 325
Target Start/End: Complemental strand, 10184685 - 10184555
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| |  |||||||| ||||||||| |||||||||||| |  || ||||||||||||||||||||||| |||||||| ||| |||| |    
T  10184685 tatttataagaaaaaatcgactttttagattcattgaataattgatgtatatgatccagaatatagaccaaatacatcatttatacaatgaataaaaaaa 10184586  T
Q  296 tttaaatatttctt-ataaataggactggag 325  Q
     | |||||||  || ||||||||||||||||    
T  10184585 gtcaaatattaattaataaataggactggag 10184555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 190 - 332
Target Start/End: Original strand, 44796350 - 44796491
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| ||||||||||| ||||||| | |||||||||||  | | |||||| ||||||||||||||||| |||| |||| |||     
T  44796350 cggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacatagcctagaa-atagaccaaatacatcaactattcaatgaatc 44796448  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||| | | || | ||||||||| ||||||| |||||||||||    
T  44796449 aaaaaagtaaattgtttcttatatataggaccggagggagtat 44796491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 196 - 332
Target Start/End: Original strand, 12958790 - 12958925
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || |  ||||| ||||||||||||||||| |||| |||| ||| |||| |    
T  12958790 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 12958888  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | || | ||||||||| ||||||| |||||||||||    
T  12958889 gtaaattgtttcttatatataggaccggagggagtat 12958925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 1223131 - 1223234
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| |||||||||||||||  | |||||||| |||||||| |||||| |||||||||||| | |||||||||||||||||| || ||| |||| ||||    
T  1223131 cggtcatatttataagaaaaaagtgactttttagattcattgtgtaattaatgtatcttgtcaaaaatatagaccaaatacataatttatgcaatgaatt 1223230  T
Q  290 aaaa 293  Q
    ||||    
T  1223231 aaaa 1223234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 331
Target Start/End: Original strand, 6899422 - 6899568
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||||||||||||| | ||||||| | ||||||||||| ||   |||||| ||||| ||||||||||| |||| |||    
T  6899422 tacctccggtcctatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaa-atagatcaaatacatcaactattcaa 6899520  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagta 331  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||    
T  6899521 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 6899568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 331
Target Start/End: Complemental strand, 36366170 - 36366024
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| |||| |||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| ||||  ||    
T  36366170 tacctccggtcctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattgaa 36366072  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagta 331  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||    
T  36366071 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 36366024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 196 - 330
Target Start/End: Complemental strand, 8453728 - 8453595
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    |||||||||||||||||| | |||||| || ||||||||||||||| ||||||||||||||||||||  |||||||| || |||  ||| ||| |||| |    
T  8453728 tatttataagaaaaatttgattttttagatacattgagtaattgatatatcttgtctagaatataga-taaatacattatttatgtaatgaatcaaaaaa 8453630  T
Q  296 tttaaatatttcttataaataggactggagggagt 330  Q
    || |||| |||| ||||||||| || ||| |||||    
T  8453629 ttcaaatgtttcctataaatagaaccggatggagt 8453595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 190 - 331
Target Start/End: Complemental strand, 24619097 - 24618957
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtc-tagaatatagaccaaatacatcatctatacaataaat 288  Q
    ||||| |||||||||||| || || |||||| | ||||||||||||||| ||||| |||||  |||||||||||||||||||||||| ||| |||| |||    
T  24619097 cggtcatatttataagaacaagttgactttt-agattcattgagtaattaatgta-cttgttatagaatatagaccaaatacatcatttatgcaatgaat 24619000  T
Q  289 taaaacatttaaatatttcttataaataggactggagggagta 331  Q
     |||| | | |||  ||||||||||||||||||||||| ||||    
T  24618999 caaaaaagtcaaaggtttcttataaataggactggaggtagta 24618957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 32597638 - 32597512
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||  | || || ||||||||| ||||||||| | ||  |||| |||     
T  32597638 cggtcttatttataagaaaaagttaacttttaaaattcattgagtaattaatgtacgtggtataaaatatagacaaaatacatcgtttacgcaatgaatc 32597539  T
Q  290 aaaacatttaaatatttcttataaata 316  Q
    |||| | | |||| |||||||||||||    
T  32597538 aaaaaagtcaaatgtttcttataaata 32597512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 22429537 - 22429685
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| |||| |||||| ||| ||| | ||||| ||||| || | |||||| ||||||||||||||||| |||| |||    
T  22429537 tacctccggtcctatttataagaaaaagttaattttttagatttattcaataattaatgtacctagcctagaa-atagaccaaatacatcaactattcaa 22429635  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  22429636 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtata 22429685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 24177974 - 24178122
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | || |||||||| || |  ||||| ||||||||||||||||| |||| |||    
T  24177974 tacctccggtcctatttataagaaaaagttaactttttagattcattcaatatttgatgtacctagcttagaa-atagaccaaatacatcaactattcaa 24178072  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| |||| || ||||||||||||    
T  24178073 tgaatcaaaaaaataaactgtttcttatatatagaaccggagggagtata 24178122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 184 - 338
Target Start/End: Original strand, 35011214 - 35011369
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| |||| |||||| ||||||| | ||||| ||||| || | |||||| ||||||||||||||||| |||| |||    
T  35011214 tacctccggtcctatttataagaaaaagttaattttttagattcattcaataattaatgtacctagcctagaa-atagaccaaatacatcaactattcaa 35011312  T
Q  284 taaattaaaacatttaaatatttct--tataaataggactggagggagtatagtttt 338  Q
    | ||| |||| | | || | |||||  |||| ||||||| |||||||||||| ||||    
T  35011313 tgaatcaaaaaagtaaattgtttcttatatatataggaccggagggagtatattttt 35011369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 42786372 - 42786511
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||  | |  ||||| ||||||||||||||| | |||| ||||||||     
T  42786372 cggtcttatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcttagaa-atagaccaaatacattaactattcaataaatc 42786470  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagta 331  Q
    |||| | | || | ||||||||| ||||||| ||||| ||||    
T  42786471 aaaa-agtaaattgtttcttatatataggaccggaggaagta 42786511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 24821981 - 24821904
Alignment:
Q  240 atgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaatag 317  Q
    ||||||||||||||||||||| |  |||||||| || |||  |||||||||||| | |||||| ||||||||||||||    
T  24821981 atgtatcttgtctagaatatatattaaatacattatttatgtaataaattaaaaaagttaaatgtttcttataaatag 24821904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 274
Target Start/End: Complemental strand, 8793859 - 8793775
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    ||||| ||||||||||||| |||| |||||||  ||||||||  ||| |||||||| | ||||| | ||||||||||||||||||    
T  8793859 cggtcctatttataagaaatatttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatca 8793775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 274
Target Start/End: Complemental strand, 24915309 - 24915226
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    ||||| |||||||| |||||| ||||||||||| ||||||| | |||||||||||||| |  ||||| |||||| ||||||||||    
T  24915309 cggtcctatttatatgaaaaaattaactttttagattcattaaataattgatgtatctagcttagaa-atagacaaaatacatca 24915226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 232 - 275
Target Start/End: Original strand, 30255783 - 30255826
Alignment:
Q  232 agtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    ||||||||||||||||||||||||||||| | ||||||||||||    
T  30255783 agtaattgatgtatcttgtctagaatatatatcaaatacatcat 30255826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 4156394 - 4156468
Alignment:
Q  196 tatttataagaaaaat-ttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaata 269  Q
    |||||||||||||||  || |||| ||| || |||||||||||||||||||||||| |  |||||||||||||||    
T  4156394 tatttataagaaaaaaattgacttgttagatacattgagtaattgatgtatcttgtttgaaatatagaccaaata 4156468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 15720207 - 15720289
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    ||||| ||||||||||||||| ||||||||||| | | || ||||||||||||||| |  | || |||||||| |||||||||    
T  15720207 cggtcctatttataagaaaaaattaactttttagacttatagagtaattgatgtatttgttataaaatatagatcaaatacat 15720289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 293
Target Start/End: Complemental strand, 883752 - 883655
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaa 293  Q
    ||||||||||||||| || |||||||| ||| |||| |||||| || ||| ||||||| |||||| | |||||| ||||| ||| |||  ||||||||    
T  883752 tatttataagaaaaagttgactttttagattgattgtgtaattaatatattttgtctaaaatataaatcaaatatatcatttatgcaacgaattaaaa 883655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 40483285 - 40483346
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtat 245  Q
    ||||| ||||| ||||||||||||| |||||||||||| |||||||||  ||| ||||||||    
T  40483285 tacctccggtcctatttataagaaatatttaacttttttaattcattgcataaatgatgtat 40483346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 331
Target Start/End: Complemental strand, 5031607 - 5031463
Alignment:
Q  187 cttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataa 286  Q
    ||||| || ||||||||||||| |||| |||||||  ||||||||  ||| |||||||| | ||||| | | ||||| | ||||||||  ||   ||| |    
T  5031607 cttcgctcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttagtctatattctagacaagatacatcaattacttaatga 5031508  T
Q  287 attaaaacatttaaatatttcttataaataggactggagggagta 331  Q
    ||| ||| | |||||| ||||||||||||||||| ||||| ||||    
T  5031507 atttaaaaagttaaatttttcttataaataggaccggaggaagta 5031463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 275
Target Start/End: Complemental strand, 26998796 - 26998720
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    ||||||| |||| ||||||||||||||| ||| | ||| |||||||| | ||| | ||| |||||||||||||||||    
T  26998796 ttataagtaaaaattaactttttaaatttatttattaaatgatgtatttggtcaataatgtagaccaaatacatcat 26998720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 35794657 - 35794606
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgt 250  Q
    ||||||||||  ||| |||||||| ||||||||||||||| |||||||||||    
T  35794657 ttataagaaactttttactttttagattcattgagtaattaatgtatcttgt 35794606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 13964528 - 13964470
Alignment:
Q  217 tttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    |||||| ||||||||||||| |||||||  | ||||| ||||||||||| |||||||||    
T  13964528 tttttagattcattgagtaaatgatgtacatggtctataatatagaccacatacatcat 13964470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 224 - 274
Target Start/End: Original strand, 27789321 - 27789371
Alignment:
Q  224 attcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    ||||||||| |||||||||||||| || || ||||| ||||||||||||||    
T  27789321 attcattgaataattgatgtatctggtatataatattgaccaaatacatca 27789371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 36191856 - 36191793
Alignment:
Q  219 tttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaat 284  Q
    |||| ||||||||| ||||||||||||||||| || |||||  |||||||||||||| ||| ||||    
T  36191856 tttagattcattgaataattgatgtatcttgtataaaatat--accaaatacatcatttatgcaat 36191793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 32272731 - 32272678
Alignment:
Q  219 tttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    |||| ||||||||| ||| |||||||||| ||||| ||||| ||||||||||||    
T  32272731 tttagattcattgaataaatgatgtatctcgtctataatattgaccaaatacat 32272678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 32575173 - 32575230
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgat 241  Q
    ||||| ||||| |||||| |||||||| ||||||||||| ||||||| | ||||||||    
T  32575173 tacctccggtcctatttacaagaaaaagttaactttttagattcattcaataattgat 32575230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 7e-39; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 35099195 - 35099069
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| || || ||||||||| |||| |||||| || ||||||||||||||||||||||||||||||||| |||||||||||||    
T  35099195 cggtcctatttataagaaaaagttgaccttttaaatttattgtgtaattaatatatcttgtctagaatatagaccaaatacatcatttatacaataaatt 35099096  T
Q  290 aaaacatttaaatatttcttataaata 316  Q
    |||| | ||||||||||||||||||||    
T  35099095 aaaaaagttaaatatttcttataaata 35099069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 190 - 332
Target Start/End: Complemental strand, 45010890 - 45010748
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||| ||| |||| |||||| ||| ||||| |||||||||||||| || |||||||||||||| | ||||||| ||||||||||||     
T  45010890 cggtcctatttataagagaaaattaattttttagatttattgaataattgatgtatctagtttagaatatagaccacaaacatcatttatacaataaatc 45010791  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||| | | ||||||||||||||||||||||| ||||||||||    
T  45010790 aaaaaagtcaaatatttcttataaataggactagagggagtat 45010748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 23223097 - 23222972
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| || | |||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||| ||||||||    
T  23223097 cggtcatatttataagaaaaaattga-tttttagattcattgagtaactgatgtatcttgtctaaaatatagaccaaatacatcatttatataataaatt 23222999  T
Q  290 aaaacatttaaatatttcttataaata 316  Q
    |||| | | |||| |||||||||||||    
T  23222998 aaaaaagtcaaatgtttcttataaata 23222972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 44518041 - 44518174
Alignment:
Q  187 cttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataa 286  Q
    ||||| || |||||||||||||| ||| |||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||| || ||||| |    
T  44518041 cttcgatcctatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctaaaatatagaccaaatacatcatttagacaatga 44518140  T
Q  287 attaaaacatttaaatatttcttataaataggac 320  Q
    || |||| | | |||  |||||||||||||||||    
T  44518141 atcaaaaaagtcaaagttttcttataaataggac 44518174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 21662894 - 21663035
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| || |||||||| ||||||||||||||| |||||  | || |||| ||||||||||||||||||| ||| |||| |||     
T  21662894 cggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtatagattatagaccaaatacatcatttatgcaatgaatc 21662993  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagta 331  Q
    |||| | |||||| ||||||||||||| ||| ||||||||||    
T  21662994 aaaaaagttaaatgtttcttataaataagaccggagggagta 21663035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 186 - 331
Target Start/End: Original strand, 54537447 - 54537592
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaata 285  Q
    |||||| || |||||||||||||||||| |||||| | |||||||||||||||||||||||| |||||||||||||| ||||||||  || ||| ||||     
T  54537447 ccttcgatcctatttataagaaaaatttgacttttaagattcattgagtaattgatgtatctagtctagaatatagatcaaatacacaatttatgcaatg 54537546  T
Q  286 aattaaaacatttaaatatttcttataaataggactggagggagta 331  Q
    ||| |||| | | ||  |||||||||||||||||| | ||||||||    
T  54537547 aatcaaaaaagtcaataatttcttataaataggaccgaagggagta 54537592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 196 - 332
Target Start/End: Original strand, 43448972 - 43449108
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || | |||||| |||||||||||||||||| |||||||||||  ||||| |||||||||||||| |||||||| ||  |||| |    
T  43448972 tatttataagaaaaagttgattttttagattcattgagtaattgatatatcttgtctatgatataaaccaaatacatcatttatacaatgaaccaaaaaa 43449071  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | |||||||||||||||||||||  | |||||||||    
T  43449072 atcaaatatttcttataaataggatcgaagggagtat 43449108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 195 - 331
Target Start/End: Original strand, 52864964 - 52865100
Alignment:
Q  195 ttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaac 294  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||| ||||| ||||| ||| |||| ||| ||||     
T  52864964 ttatttatgagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagactaaatatatcatttatgcaatgaatcaaaaa 52865063  T
Q  295 atttaaatatttcttataaataggactggagggagta 331  Q
    | | || ||||| ||||||||||  | ||||||||||    
T  52865064 agtcaattattttttataaatagcgccggagggagta 52865100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 190 - 332
Target Start/End: Complemental strand, 53442047 - 53441905
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| || |||||||||||||||||| ||||| |||||  | || |||||| || |||||||||||||| ||| |||| |||     
T  53442047 cggtcctatttataagaaaaagttgactttttaaattcattgaataattaatgtacttggtatagaatgtataccaaatacatcatttatgcaatgaatc 53441948  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||| | | |||| ||||||||||||||||| |||||||||||    
T  53441947 aaaaaagtaaaatgtttcttataaataggaccggagggagtat 53441905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 217 - 316
Target Start/End: Complemental strand, 25954135 - 25954036
Alignment:
Q  217 tttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaata 316  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||| |||| ||| |||||||| | | ||| ||||||||||||||    
T  25954135 tttttaaattcattgagtaattaatgtatcttgtctagaatatagatcaaatatatcatttatataatgaattaaaaaagtcaaacatttcttataaata 25954036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 40460353 - 40460448
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaatt-gatgtatcttgtctagaatatagaccaaatacatcatctatacaat 284  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||  ||||||||||| || ||||||||||||||||||||| ||||||||    
T  40460353 cggtcttatttataagaaaaaattaactttttagattcattgtgtaattaaatgtatcttgtttaaaatatagaccaaatacatcatttatacaat 40460448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 198 - 331
Target Start/End: Complemental strand, 12065041 - 12064908
Alignment:
Q  198 tttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatt 297  Q
    ||||||||||||| || |||||||||||||||| ||||||| || ||| | || ||||||||||||||||||||||||  || |||| ||| |||| | |    
T  12065041 tttataagaaaaaattgactttttaaattcattaagtaattaatatatttagtatagaatatagaccaaatacatcattaatgcaatgaatcaaaaaagt 12064942  T
Q  298 taaatatttcttataaataggactggagggagta 331  Q
     |||| |||||||||| |||||| ||||||||||    
T  12064941 aaaatgtttcttataagtaggaccggagggagta 12064908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 196 - 333
Target Start/End: Complemental strand, 29457973 - 29457837
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| ||||||||||| ||||||| | | ||||||||| || |||||||| ||||||||||||||||| |||| |||| ||| |||| |    
T  29457973 tatttataagaaaaagttaactttttagattcattcaatgattgatgtacctagtctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 29457875  T
Q  296 tttaaatatttcttataaataggactggagggagtata 333  Q
     | || | ||||||||| ||||||||||||| ||||||    
T  29457874 gtaaattgtttcttatatataggactggaggaagtata 29457837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 210 - 332
Target Start/End: Original strand, 8266261 - 8266381
Alignment:
Q  210 atttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttctt 309  Q
    ||||||||||||| |||||||||||||||||||||| || |||| |||||  |||||| |||| || |||||||| ||| |||| | | |||| ||||||    
T  8266261 atttaactttttagattcattgagtaattgatgtattttatctaaaatat--accaaacacattatttatacaatgaatcaaaaaagtcaaatgtttctt 8266358  T
Q  310 ataaataggactggagggagtat 332  Q
    ||||||||||| |||||||||||    
T  8266359 ataaataggaccggagggagtat 8266381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 196 - 332
Target Start/End: Original strand, 51723392 - 51723528
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || | |||||| ||||||||||||||| |||||| |  | |||||||||||| ||||| ||||| |||||||| ||| |||| |    
T  51723392 tatttataagaaaaagttgattttttagattcattgagtaattaatgtatttgatatagaatatagactaaatatatcatttatacaatgaatcaaaaaa 51723491  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     |||||| |||| ||| ||||| || |||||||||||    
T  51723492 gttaaatttttcctattaatagaaccggagggagtat 51723528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 53357429 - 53357325
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattg-agtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaat 288  Q
    ||||| ||||| ||||||||  || |||||||| ||| |||| |||||||||| ||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  53357429 cggtcctatttgtaagaaaacattgactttttagatttattggagtaattgatctatcttgtctagaatatagaccaaatatatcatttatgcaataaat 53357330  T
Q  289 taaaa 293  Q
    |||||    
T  53357329 taaaa 53357325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 332
Target Start/End: Original strand, 51516966 - 51517107
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtc-tagaatatagaccaaatacatcatctatacaataaat 288  Q
    ||||| ||||||||||||||| || |||||||| ||| || |||||||| ||||| |||| | |||||||||||||||||||||||| ||| |||| ||     
T  51516966 cggtcctatttataagaaaaagttgactttttagatt-atggagtaattaatgta-cttggcatagaatatagaccaaatacatcatttatgcaatgaac 51517063  T
Q  289 taaaacatttaaatatttcttataaataggactggagggagtat 332  Q
     |||| | | |||| ||||||||||||||||| |||||||||||    
T  51517064 caaaaaagtcaaatgtttcttataaataggaccggagggagtat 51517107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 196 - 333
Target Start/End: Original strand, 33371875 - 33372011
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| |||| |||||||||| ||| | ||||||||||| || | ||| || ||||||||||||||||| |||| |||| ||| |||| |    
T  33371875 tatttataagaaaaagttaattttttaaatttattcaataattgatgtacctagcctaaaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 33371973  T
Q  296 tttaaatatttcttataaataggactggagggagtata 333  Q
     | || ||||||||||| ||||||| |||| |||||||    
T  33371974 ataaattatttcttatatataggaccggagcgagtata 33372011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 187 - 319
Target Start/End: Complemental strand, 33808452 - 33808321
Alignment:
Q  187 cttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataa 286  Q
    |||||||| ||||||||||||||||| | ||||||||||| ||||| |||||||||||| | |  |||||||| |||||| || || || ||| ||||||    
T  33808452 cttcggtcctatttataagaaaaattga-ctttttaaattaattgaataattgatgtatttggattagaatattgaccaagtatattatttatgcaataa 33808354  T
Q  287 attaaaacatttaaatatttcttataaatagga 319  Q
    || |||| | | |||||||| ||||||||||||    
T  33808353 ataaaaaaaatcaaatattttttataaatagga 33808321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 199 - 333
Target Start/End: Complemental strand, 25910322 - 25910188
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacattt 298  Q
    |||||||||||| || |||||||||||| ||||||||||| |||||| | || |||||||||||||||||||||  | ||| || | ||| ||||   |     
T  25910322 ttataagaaaaagttgactttttaaatttattgagtaattaatgtatttggtgtagaatatagaccaaatacattctttatgcagtgaataaaaaatctc 25910223  T
Q  299 aaatatttcttataaataggactggagggagtata 333  Q
    |||| ||||||||||||| ||| | ||||||||||    
T  25910222 aaatgtttcttataaatatgacggaagggagtata 25910188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 196 - 274
Target Start/End: Original strand, 49885393 - 49885470
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    ||||||||||||||| |||| |||||| ||||||| | |||||||||||||| |||||||| |||||||||||||||||    
T  49885393 tatttataagaaaaaattaattttttagattcattcaataattgatgtatctagtctagaa-atagaccaaatacatca 49885470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 12747837 - 12747756
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaataca 271  Q
    ||||| ||||||||||||||| || | |||||| |||||| ||||||||||||||| | |||||||||||| ||||||||||    
T  12747837 cggtcctatttataagaaaaaattgattttttagattcatcgagtaattgatgtatttggtctagaatatacaccaaataca 12747756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 224 - 331
Target Start/End: Complemental strand, 13622593 - 13622486
Alignment:
Q  224 attcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaataggactgg 323  Q
    |||||||| ||| || ||||||||||| || ||||||||||||||| ||||| ||| |||| || ||||| | | |||| ||||||||||||||||| ||    
T  13622593 attcattgtgtagttaatgtatcttgtgtaaaatatagaccaaatatatcatttatgcaatgaactaaaaaagtcaaatgtttcttataaataggaccgg 13622494  T
Q  324 agggagta 331  Q
     |||||||    
T  13622493 tgggagta 13622486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 329
Target Start/End: Original strand, 36985164 - 36985303
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||  |||| |||| | ||| ||||  ||||| ||||||||||| |||||||||||| |||||||| || ||| |||| |||     
T  36985164 cggtcctatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatgcaatgaatc 36985263  T
Q  290 aaaacatttaaatatttcttataaataggactggagggag 329  Q
    |||| | | ||| |||||||||||||  || |||||||||    
T  36985264 aaaaaagtcaaaaatttcttataaatgagattggagggag 36985303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 329
Target Start/End: Original strand, 37010603 - 37010742
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||  |||| |||| | ||| ||||  ||||| ||||||||||| |||||||||||| |||||||| || ||| |||| |||     
T  37010603 cggtcctatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatgcaatgaatc 37010702  T
Q  290 aaaacatttaaatatttcttataaataggactggagggag 329  Q
    |||| | | ||| |||||||||||||  || |||||||||    
T  37010703 aaaaaagtcaaaaatttcttataaatgagattggagggag 37010742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 43343455 - 43343582
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaa-----atacatcatctatacaataaatta 290  Q
    ||||||||||||||| || |||||||| ||| |||| |||||| ||||||||  |||||||||||||||||      |||||||| |||||||| ||| |    
T  43343455 tatttataagaaaaaattgactttttagattaattgcgtaattaatgtatctactctagaatatagaccaattggtgtacatcatttatacaatgaatca 43343554  T
Q  291 aaacatttaaatatttcttataaatagg 318  Q
    ||| | | |||| |||||||||||||||    
T  43343555 aaaaagtcaaatgtttcttataaatagg 43343582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 316
Target Start/End: Complemental strand, 19649718 - 19649593
Alignment:
Q  191 ggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatta 290  Q
    |||| |||||| |||||| |||| | |||||| ||||||||||||||||||||||   ||||| ||||||||| ||||||||||  ||| |||| ||| |    
T  19649718 ggtcctatttacaagaaacatttgattttttagattcattgagtaattgatgtattcggtctaaaatatagactaaatacatcaattattcaatgaatca 19649619  T
Q  291 aaacatttaaatatttcttataaata 316  Q
    ||| | | |||| |||||| ||||||    
T  19649618 aaaaagtcaaatgtttcttgtaaata 19649593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 5177911 - 5177816
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctata 280  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| ||    ||||| ||||||||||||||||| |||||    
T  5177911 tacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctaacttagaa-atagaccaaatacatcaactata 5177816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 32711317 - 32711258
Alignment:
Q  215 actttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    |||||||| ||||||||| |||||||||||||| ||||| ||||||| ||||||||||||    
T  32711317 actttttagattcattgaataattgatgtatctggtctataatataggccaaatacatca 32711258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 312
Target Start/End: Original strand, 9236111 - 9236217
Alignment:
Q  206 aaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatt 305  Q
    ||||| ||||||||||  ||||||||||||||||||||||||  | |||||||||||| ||||| ||||| |||  ||| ||| |||| | | |||||||    
T  9236111 aaaaagttaacttttttgattcattgagtaattgatgtatctgatatagaatatagactaaatatatcatttatgtaatgaatcaaaaaagtcaaatatt 9236210  T
Q  306 tcttata 312  Q
    || ||||    
T  9236211 tcgtata 9236217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 16295401 - 16295463
Alignment:
Q  197 atttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatat 259  Q
    ||||||||||||| || ||||| ||| ||| ||||| ||||||||||||||||||||||||||    
T  16295401 atttataagaaaacttcaacttcttagatttattgaataattgatgtatcttgtctagaatat 16295463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 332
Target Start/End: Complemental strand, 21663026 - 21662884
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||||| ||||||||||||  ||||||||  ||| |||||||| | ||||| ||| || ||||| ||||| |  ||  |||| |||     
T  21663026 cggtcttatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctataatctataccaagtacattaattactcaatgaatc 21662927  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
     ||| | | || | ||||||||||||||||| |||||||||||    
T  21662926 taaaaagtcaactttttcttataaataggaccggagggagtat 21662884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 48593175 - 48593232
Alignment:
Q  215 actttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    |||||||| || |||||| |||||||||||||  ||||||||||||||||||||||||    
T  48593175 actttttagatacattgaataattgatgtatcgggtctagaatatagaccaaatacat 48593232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 274
Target Start/End: Complemental strand, 7136890 - 7136812
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    |||||||||  ||| ||| | |||||||||| ||| ||||||| ||||||||| | |||||||||||||||| ||||||    
T  7136890 tatttataaataaactttgaatttttaaatttattaagtaattaatgtatcttctatagaatatagaccaaacacatca 7136812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 9197164 - 9197094
Alignment:
Q  247 ttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaatag 317  Q
    |||| |||||||||||| ||||||||||| ||| |||| ||| |||| | | |||||||||||||||||||    
T  9197164 ttgtttagaatatagacaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaatag 9197094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 19649585 - 19649671
Alignment:
Q  188 ttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    |||||| ||||||| |||||| |||| |||||||  ||||||||| |||||||||||| | ||||| | | |||||| |||||||||    
T  19649585 ttcggttttatttacaagaaacatttgacttttttgattcattgaataattgatgtatttagtctatattttagaccgaatacatca 19649671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 272
Target Start/End: Complemental strand, 28406607 - 28406525
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    ||||| |||||| |||||| | || ||||||||  |||||||| ||||| ||||| |  ||||||||||||||||||||||||    
T  28406607 cggtcctatttacaagaaacaattgactttttaggttcattgaataatttatgtacccggtctagaatatagaccaaatacat 28406525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 44593205 - 44593266
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatct 247  Q
    |||||||||||||||| |||||||| || ||||||||||| |||||| ||||  ||||||||    
T  44593205 ccttcggtcttatttacaagaaaaagttgactttttaaatacattgaataatatatgtatct 44593266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 47505231 - 47505304
Alignment:
Q  198 tttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaataca 271  Q
    ||||||||||||  || ||| |||| ||||||| | ||||| ||||||||||| ||||||||||| ||||||||    
T  47505231 tttataagaaaatattgactctttacattcatttactaattaatgtatcttgtttagaatatagatcaaataca 47505304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 2544489 - 2544561
Alignment:
Q  213 taactttttaaattcattgagtaattgatgtatcttg-tctagaatatagaccaaatacatcatctatacaat 284  Q
    ||||||||||  |||||||| |||||||||||||||| | || | ||||||||||||||||||  ||||||||    
T  2544489 taactttttaggttcattgaataattgatgtatcttgttataaattatagaccaaatacatcacttatacaat 2544561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 293
Target Start/End: Original strand, 29290794 - 29290889
Alignment:
Q  198 tttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaa 293  Q
    ||||||||||||| || |||||||| |||||||||  || ||||||||||  |||| | ||||||| |||||||| |  ||| |||| ||||||||    
T  29290794 tttataagaaaaaattcactttttagattcattgaacaactgatgtatctgatctatattatagactaaatacataagttattcaatgaattaaaa 29290889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 8987737 - 8987819
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    ||||||||||||||| ||| | |||| |||||| || |||||| ||| | |||||| | ||||||||| || |||||||||||    
T  8987737 cggtcttatttataataaataattaattttttagatgcattgaataacttatgtatttggtctagaatttaaaccaaatacat 8987819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 272
Target Start/End: Complemental strand, 9190172 - 9190086
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    |||||| || ||||||||||| ||| || |||||||| || |||||| ||||  |||||||| ||| ||||| || |||||||||||    
T  9190172 ccttcgatcctatttataagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatttaaaccaaatacat 9190086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 190 - 324
Target Start/End: Complemental strand, 40198535 - 40198401
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||  ||| | || |||||||| ||| |||||  ||||||||||||| ||| | | | |||||| ||||||| |  ||| |||| |||     
T  40198535 cggtcttatttatagtaaacaattgactttttagatttattgaacaattgatgtatctggtcgatattctagaccgaatacataaattattcaatgaata 40198436  T
Q  290 aaaacatttaaatatttcttataaataggactgga 324  Q
    |||| ||| || | ||||||||||||| |||||||    
T  40198435 aaaaaattcaattgtttcttataaataagactgga 40198401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 192 - 274
Target Start/End: Original strand, 40198405 - 40198487
Alignment:
Q  192 gtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    ||||||||||||||||| | || | |||||  ||||||||| ||||| ||||||   ||||||||||| ||||| ||||||||    
T  40198405 gtcttatttataagaaacaattgaatttttttattcattgaataatttatgtattcggtctagaatatcgaccagatacatca 40198487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 47977936 - 47978000
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattga-gtaattgatgtatcttgtctagaatata 260  Q
    ||||||||| ||||||| ||||||||||||||||| |  ||||| |||||||||||||| ||||||    
T  47977936 tatttataaaaaaaatt-aactttttaaattcatttatataattaatgtatcttgtctaaaatata 47978000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 4e-37; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 197 - 320
Target Start/End: Complemental strand, 32457346 - 32457223
Alignment:
Q  197 atttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacat 296  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| |||| ||| |||| |     
T  32457346 atttataagaaaaatttgactttttagattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatcaaaaaag 32457247  T
Q  297 ttaaatatttcttataaataggac 320  Q
    | ||||||||||||||||||||||    
T  32457246 tcaaatatttcttataaataggac 32457223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 10204936 - 10205063
Alignment:
Q  191 ggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatta 290  Q
    |||| |||||||||||||| |||| ||||||| |||||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||||| ||| |    
T  10204936 ggtcatatttataagaaaatttta-ctttttagattcattgagcaattgatgtatcttgtctaaaatatagactaaatacatcatttatacaatgaatca 10205034  T
Q  291 aaacatttaaatatttcttataaatagga 319  Q
    ||| | | |||||||||||||||||||||    
T  10205035 aaagagtcaaatatttcttataaatagga 10205063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 196 - 331
Target Start/End: Complemental strand, 38983133 - 38982998
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||| ||||| || | |||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| |||| ||| |||| |    
T  38983133 tatttataaaaaaaagttgattttttagattcattgtgtaattgatgtatcttgtctagaatatagacaaaatacatcatttatgcaatgaatcaaaaaa 38983034  T
Q  296 tttaaatatttcttataaataggactggagggagta 331  Q
     | |||||||| ||||||||||||| ||||||||||    
T  38983033 gtcaaatattttttataaataggaccggagggagta 38982998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 186 - 320
Target Start/End: Complemental strand, 30758863 - 30758730
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaata 285  Q
    |||| |||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||| | ||||||||||||||| ||| ||| ||||     
T  30758863 cctttggtcctatttataagaaaaatttgactttttagatt-attgagtaattgatgtatcttgtctaaagtatagaccaaatacaccatttatgcaatg 30758765  T
Q  286 aattaaaacatttaaatatttcttataaataggac 320  Q
    ||| |||| | | ||||||||||||||||||||||    
T  30758764 aataaaaaaagtcaaatatttcttataaataggac 30758730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 20555266 - 20555406
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| |||| |||||| || |||||| ||||||||||||||||||||||||||||||||||||||| || |||  ||| || |    
T  20555266 cggtcctatttataagaaaaaattaattttttagatacattgaataattgatgtatcttgtctagaatatagaccaaatacattatttatgtaatgaa-t 20555364  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagta 331  Q
    |||| | |||||| |||| |||||||||||| ||||||||||    
T  20555365 aaaaaagttaaatgtttcctataaataggaccggagggagta 20555406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 184 - 331
Target Start/End: Original strand, 30761380 - 30761527
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||| |||| |||||||| ||||||||||||||| || ||||||||||||||||||||| ||||||||  | | | |||    
T  30761380 tacctccggtcctatttataagaaacatttgactttttacattcattgagtaattaatttatcttgtctagaatatagactaaatacatattttgtgcaa 30761479  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagta 331  Q
    | ||| |||| | | |||| ||||||||||||||||| ||||||||||    
T  30761480 tgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagta 30761527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 193 - 316
Target Start/End: Original strand, 33824361 - 33824484
Alignment:
Q  193 tcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaa 292  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| |  ||||| ||||| |||||||| ||| | |    
T  33824361 tcttatttataagaaaaatttgactttttaaattcattgagtaattgatatatcttgtctaaaatatatattaaatatatcatttatacaatgaatcaga 33824460  T
Q  293 acatttaaatatttcttataaata 316  Q
    | | | ||||||||||||||||||    
T  33824461 aaagtcaaatatttcttataaata 33824484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 188 - 333
Target Start/End: Original strand, 29988898 - 29989043
Alignment:
Q  188 ttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaa 287  Q
    |||| |||||||||||| ||||| || | |||||| |||||||| |||||| || ||| |||||||||||||||| |||||||||||| ||| |||| ||    
T  29988898 ttcgatcttatttataaaaaaaaattgattttttatattcattgtgtaattaatatattttgtctagaatatagatcaaatacatcatttatgcaatgaa 29988997  T
Q  288 ttaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | |||| | | |||| |||||| |||||||||||||||||||||||    
T  29988998 tcaaaaaagtcaaatgtttcttctaaataggactggagggagtata 29989043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 191 - 331
Target Start/End: Original strand, 12962714 - 12962854
Alignment:
Q  191 ggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatta 290  Q
    |||||||||||||||||||| || |||||||| ||||||||||||||| |||||  | || || ||||||||||||||||||||| ||| |||| ||| |    
T  12962714 ggtcttatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtataaaatatagaccaaatacatcatttatgcaatgaatca 12962813  T
Q  291 aaacatttaaatatttcttataaataggactggagggagta 331  Q
    ||| | | |||| |||||||||||||||||  |||||||||    
T  12962814 aaaaagtcaaatgtttcttataaataggaccagagggagta 12962854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 190 - 317
Target Start/End: Complemental strand, 29169975 - 29169848
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||| |||| ||||||||||| |||||||||||| || ||||| ||||    
T  29169975 cggttttatttataagaaaaatttgactttttaaatttattgagtaattgatatat-ttgtttagaatatagatcaaatacatcatttagacaatgaatt 29169877  T
Q  290 -aaaacatttaaatatttcttataaatag 317  Q
     |||| | | |||||||||||||||||||    
T  29169876 aaaaaaagtcaaatatttcttataaatag 29169848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 35728599 - 35728475
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||| ||| |||| ||| |||| |    
T  35728599 tatttataaaaaaaatttggctttttaaattcattgaataattgatgtatcttgtttagaatatagaccaaatatatcatttatgcaatgaatcaaaaaa 35728500  T
Q  296 -tttaaatatttcttataaatagga 319  Q
      | |||||||||||||||||||||    
T  35728499 gatcaaatatttcttataaatagga 35728475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 11030326 - 11030203
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||  | |||||||||||||||||||||||| |||  ||| ||| |||| |    
T  11030326 tatttataagaaaaaattaactttttagattcattgagtaattgatgtatctgatatagaatatagaccaaatacatcatttatgtaatgaatcaaaaaa 11030227  T
Q  296 tttaaatatttcttataaatagga 319  Q
     | |||| ||||||||| ||||||    
T  11030226 gtcaaatgtttcttatatatagga 11030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 190 - 331
Target Start/End: Complemental strand, 7943580 - 7943438
Alignment:
Q  190 cggtcttatttataagaaaaat-ttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaat 288  Q
    ||||| |||||||||||||||  || |||||||| ||||||||| |||||||||||||||||||| ||||||||||||||| ||||| ||| |||| |||    
T  7943580 cggtcctatttataagaaaaaaattgactttttagattcattgaataattgatgtatcttgtctacaatatagaccaaatatatcatttatgcaatgaat 7943481  T
Q  289 taaaacatttaaatatttcttataaataggactggagggagta 331  Q
     |||| | | |||||| ||||||||||| ||| ||||| ||||    
T  7943480 aaaaaaagtcaaatatctcttataaataagaccggaggaagta 7943438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 190 - 332
Target Start/End: Complemental strand, 9152519 - 9152377
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    |||||||||||| |||||| | || |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||  |||  ||| | |     
T  9152519 cggtcttatttacaagaaacaattgactttttagattcattgagtaattgatgtatctagtctaaaatatagaccaaatacatcaattatttaatgactc 9152420  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    |||| | | |||| |||||| |||||||||| |||||||||||    
T  9152419 aaaaaagtcaaatgtttcttgtaaataggaccggagggagtat 9152377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 190 - 320
Target Start/End: Complemental strand, 38554598 - 38554468
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||  | || ||||||||||||||||||||| || |||  ||| |||     
T  38554598 cggtcctatttataagaaaaagttaactttttaaattcattgagtaattaatgtacttggtatagaatatagaccaaatacattatttatgtaatgaatc 38554499  T
Q  290 aaaacatttaaatatttcttataaataggac 320  Q
    |||| | | |||| |||||||||||||||||    
T  38554498 aaaatagtcaaatgtttcttataaataggac 38554468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 200 - 317
Target Start/End: Original strand, 39445013 - 39445130
Alignment:
Q  200 tataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacattta 299  Q
    |||||||||||||| |||||| | |||||||||||||||||||||| ||||||||||||||||  ||||||| ||| ||| ||||||||||||| | | |    
T  39445013 tataagaaaaatttgacttttaagattcattgagtaattgatgtattttgtctagaatatagattaaatacaccatttatgcaataaattaaaaaagtca 39445112  T
Q  300 aatatttcttataaatag 317  Q
    |  |||||||||||||||    
T  39445113 ataatttcttataaatag 39445130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 45571032 - 45571180
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  45571032 tacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 45571130  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  45571131 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtata 45571180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 45574699 - 45574847
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  45574699 tacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 45574797  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  45574798 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtata 45574847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 45578366 - 45578514
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  45578366 tacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 45578464  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  45578465 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtata 45578514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 45582033 - 45582181
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  45582033 tacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 45582131  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  45582132 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtata 45582181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 45585700 - 45585848
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  45585700 tacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 45585798  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  45585799 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtata 45585848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 45589367 - 45589515
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  45589367 tacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 45589465  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  45589466 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtata 45589515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 45593034 - 45593182
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  45593034 tacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 45593132  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  45593133 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtata 45593182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 45596701 - 45596849
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  45596701 tacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 45596799  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  45596800 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtata 45596849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 45600368 - 45600516
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  45600368 tacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 45600466  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  45600467 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtata 45600516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 45604035 - 45604183
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  45604035 tacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 45604133  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  45604134 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtata 45604183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 45607702 - 45607850
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  45607702 tacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 45607800  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  45607801 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtata 45607850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 45611369 - 45611517
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  45611369 tacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 45611467  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  45611468 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtata 45611517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 45615036 - 45615184
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||    
T  45615036 tacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaa 45615134  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||||    
T  45615135 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtata 45615184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 196 - 313
Target Start/End: Complemental strand, 41153245 - 41153128
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || |||||||| |||||||||||||||||||||| | || || ||||||||||||||||||||| ||| |||| ||| |||| |    
T  41153245 tatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcatttatgcaatgaatcaaaaaa 41153146  T
Q  296 tttaaatatttcttataa 313  Q
     | |||| ||||||||||    
T  41153145 gtcaaatgtttcttataa 41153128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 196 - 317
Target Start/End: Complemental strand, 42698198 - 42698077
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||||||||||  ||||||| |||||||| | || || ||||| || ||| |||| |    
T  42698198 tatttataaaaaaaatttgactttttagattcattgagtaattgatgtatcttgcttagaataaagaccaaacatattatttataccatgaataaaaaaa 42698099  T
Q  296 tttaaatatttcttataaatag 317  Q
      ||||||||||||||||||||    
T  42698098 gctaaatatttcttataaatag 42698077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 4410912 - 4410788
Alignment:
Q  196 tatttataagaaaaat-ttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaac 294  Q
    |||||||||||||||  || |||||||| |||||||| |||||| ||||||||||| || |||||||| |||||||||||| ||| |||||||| ||||     
T  4410912 tatttataagaaaaaagttgactttttagattcattgtgtaattaatgtatcttgtttaaaatatagatcaaatacatcatttatgcaataaatcaaaaa 4410813  T
Q  295 atttaaatatttcttataaatagga 319  Q
      |||||| ||||||||||||||||    
T  4410812 ggttaaatgtttcttataaatagga 4410788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 190 - 333
Target Start/End: Complemental strand, 43714113 - 43713971
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| |||||||||||||  ||| |||||||| ||| | |||||||||||||||||||||||| |||||||||||||||||| || ||| |||| |||     
T  43714113 cggtcctatttataagaaatttttgactttttagatttactgagtaattgatgtatcttgtcta-aatatagaccaaatacataatttattcaatgaatc 43714015  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagtata 333  Q
    |||| | | || | ||||||||||||| ||  ||||||||||||    
T  43714014 aaaaaaatcaattgtttcttataaataagagcggagggagtata 43713971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 184 - 331
Target Start/End: Original strand, 45034400 - 45034546
Alignment:
Q  184 taccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaa 283  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||| | ||||||||||| ||   |||||| ||||||||||||||||| |||| |||    
T  45034400 tacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaacctagaa-atagaccaaatacatcaactattcaa 45034498  T
Q  284 taaattaaaacatttaaatatttcttataaataggactggagggagta 331  Q
    | ||| |||| | | || | ||||||||| ||||||| ||||||||||    
T  45034499 tgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 45034546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 5109371 - 5109497
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||||| | || |||||||||| | |||||||| || |||||  | |||     
T  5109371 cggtcctatttataagaaaaagttaactttttagattcattgagtaattaatgtatttggtatagaatataggctaaatacataatttatactttgaatc 5109470  T
Q  290 aaaacatttaaatatttcttataaata 316  Q
    |||| | | ||||||||||||||||||    
T  5109471 aaaaaagtcaaatatttcttataaata 5109497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 196 - 333
Target Start/End: Complemental strand, 3838551 - 3838415
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| ||||||||||| ||||||| | | |||||||||  | |||||||| ||||||||||||||||| |||| |||| ||| |||| |    
T  3838551 tatttataagaaaaagttaactttttagattcattcaatgattgatgtacttcgtctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 3838453  T
Q  296 tttaaatatttcttataaataggactggagggagtata 333  Q
     | || | ||||||||| ||||||||||||| ||||||    
T  3838452 gtaaattgtttcttatatataggactggaggaagtata 3838415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 217 - 316
Target Start/End: Original strand, 39118049 - 39118148
Alignment:
Q  217 tttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaata 316  Q
    |||||| || ||||||||||||||| |||||| ||||||||||||||||||||||| || |||||||||||| |||| | | || ||||| |||||||||    
T  39118049 tttttagatccattgagtaattgatatatcttatctagaatatagaccaaatacataatttatacaataaatcaaaaaagtcaactattttttataaata 39118148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 196 - 317
Target Start/End: Complemental strand, 28249067 - 28248946
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || |||||||| ||||||| | ||||| |||||| | || |||||||||||| |||||||| || ||| |||| ||| |||| |    
T  28249067 tatttataagaaaaagttgactttttagattcattaaataattaatgtatttggtatagaatatagactaaatacattatttatgcaattaatcaaaaaa 28248968  T
Q  296 tttaaatatttcttataaatag 317  Q
     | |||||||||||||||||||    
T  28248967 gtcaaatatttcttataaatag 28248946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 191 - 320
Target Start/End: Complemental strand, 34447642 - 34447514
Alignment:
Q  191 ggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatta 290  Q
    |||| ||||||||||||||| || | |||||| |||||||| |||||  |||||||||||||| |||||| ||||||||||| || ||| |||| || ||    
T  34447642 ggtcctatttataagaaaaagttgattttttagattcattgtgtaatcaatgtatcttgtctaaaatataaaccaaatacattatttatgcaatgaacta 34447543  T
Q  291 aaacatttaaatatttcttataaataggac 320  Q
    ||| | | |||| |||||||||||||||||    
T  34447542 aaaaagtcaaat-tttcttataaataggac 34447514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 196 - 332
Target Start/End: Original strand, 4063286 - 4063421
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| |||| |||||| ||||||| | ||||||||||| ||  ||||||| |||||| |||||||||| |||| |||| ||| |||| |    
T  4063286 tatttataagaaaaagttaattttttagattcattcaataattgatgtacctactctagaa-atagacaaaatacatcaactattcaatgaatcaaaaaa 4063384  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | || | ||||||||| ||||||| |||||||||||    
T  4063385 gtaaattgtttcttatatataggaccggagggagtat 4063421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 197 - 332
Target Start/End: Complemental strand, 33274103 - 33273968
Alignment:
Q  197 atttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacat 296  Q
    |||||||| | || ||| |||||||| ||||||| |||||||||||||| ||||||| ||||||  ||||||| ||||| |||||||| ||| |||| |     
T  33274103 atttataaaagaacttttactttttagattcattaagtaattgatgtatgttgtctaaaatataagccaaatatatcatttatacaatgaatcaaaaaag 33274004  T
Q  297 ttaaatatttcttataaataggactggagggagtat 332  Q
    | |||  |||||||||||||| |  |||||||||||    
T  33274003 tcaaagttttcttataaatagaatcggagggagtat 33273968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 12873739 - 12873857
Alignment:
Q  198 tttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatt 297  Q
    ||||||||||||| || |||||||| ||||||| ||||||| |||||| | || |||||||||||| ||||||||||| ||| |||| ||| || | | |    
T  12873739 tttataagaaaaagttgactttttagattcattaagtaattaatgtatttggtatagaatatagactaaatacatcatttatgcaatgaatcaataaagt 12873838  T
Q  298 taaatatttcttataaata 316  Q
     |||||||| |||||||||    
T  12873839 caaatattttttataaata 12873857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 28494757 - 28494839
Alignment:
Q  235 aattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaatag 317  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||| |||| ||| |||| | | |||| ||||||||||||||    
T  28494757 aattgatgtatattgtctagaatatagaccaaatatatcatttatgcaatgaatcaaaaaaatcaaatgtttcttataaatag 28494839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 319
Target Start/End: Complemental strand, 4044714 - 4044586
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| | || |||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||| |||     
T  4044714 cggtcctatttataagaaaaagtaaaatttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatc 4044616  T
Q  290 aaaacatttaaatatttcttataaatagga 319  Q
    |||| | | || | ||||||||| ||||||    
T  4044615 aaaaaagtaaattgtttcttatatatagga 4044586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 5559372 - 5559425
Alignment:
Q  191 ggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgta 244  Q
    |||| |||||||||||||||||| |||||||| |||||||||||||||||||||    
T  5559372 ggtcatatttataagaaaaatttgactttttagattcattgagtaattgatgta 5559425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 319
Target Start/End: Original strand, 28014297 - 28014410
Alignment:
Q  206 aaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatt 305  Q
    ||||| || |||||||| ||||||||  |||||  ||||||||||||| | ||||||||||||||||||| ||| |||| ||| ||||   | |||| ||    
T  28014297 aaaaaattgactttttagattcattgtataattattgtatcttgtctatagtatagaccaaatacatcatttatgcaatgaataaaaaaggtcaaatgtt 28014396  T
Q  306 tcttataaatagga 319  Q
    ||||||||||||||    
T  28014397 tcttataaatagga 28014410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 332
Target Start/End: Original strand, 36881547 - 36881677
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    |||||||||||||||||| |||||||| || |||||||||||| |||||||||      |||||||||||||| ||| || |||  ||| ||| |||| |    
T  36881547 tatttataagaaaaatttgactttttagatacattgagtaattaatgtatctt------aatatagaccaaattcattatttatgtaatgaatcaaaaaa 36881640  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | |||| |||||| ||||||||||| || |||||||    
T  36881641 gtcaaatgtttcttgtaaataggactagatggagtat 36881677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 2936335 - 2936430
Alignment:
Q  224 attcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaatagga 319  Q
    ||||||||||||||| |||||  | || |||||||||||| ||||| ||||||||| |||| ||| |||| | | |||| ||||||||||||||||    
T  2936335 attcattgagtaattaatgtacttggtatagaatatagactaaatatatcatctatccaatgaatcaaaaaagtcaaatgtttcttataaatagga 2936430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 3837513 - 3837428
Alignment:
Q  227 cattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttata 312  Q
    ||||||||||||||| |||||||| || |||||||||||||||||| || ||| |||| ||| |||| | | |||| |||||||||    
T  3837513 cattgagtaattgatctatcttgtttaaaatatagaccaaatacattatttatgcaatgaatcaaaaaaatcaaatgtttcttata 3837428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 320
Target Start/End: Complemental strand, 11182306 - 11182175
Alignment:
Q  190 cggtcttatttataagaaaaat-ttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaat 288  Q
    ||||| ||||||||| |||||  ||||||||||||||| |||||||||||||||||| |  | ||||||||  | |||||||||||| |||  ||| |||    
T  11182306 cggtcatatttataaaaaaaaaattaactttttaaatttattgagtaattgatgtatatgatatagaatatgaatcaaatacatcatttatggaatgaat 11182207  T
Q  289 taaaacatttaaatatttcttataaataggac 320  Q
     |||| | | |||| || |||||| |||||||    
T  11182206 caaaaaagtcaaatgttgcttatatataggac 11182175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 197 - 320
Target Start/End: Original strand, 15384442 - 15384564
Alignment:
Q  197 atttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacat 296  Q
    |||||||||||||| ||||||||||| ||| ||| | ||||||||||| || | || | | ||||||||||||||||| |||| |||| ||| |||| |     
T  15384442 atttataagaaaaaattaactttttagatttatttaataattgatgtacctag-cttggaaatagaccaaatacatcaactattcaatgaatcaaaaaag 15384540  T
Q  297 ttaaatatttcttataaataggac 320  Q
    | || | ||||||||| |||||||    
T  15384541 taaattgtttcttatatataggac 15384564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 7833286 - 7833372
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    ||||||||||||| ||||||||| | | || |||||| ||||||||| ||||||||||||||  | || |||||||| || ||||||    
T  7833286 ccttcggtcttatatataagaaacaatcaattttttagattcattgaataattgatgtatctgatttaaaatatagatcagatacat 7833372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 22333656 - 22333536
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttg-tctagaatatagaccaaatacatcatctatacaataaattaaaacatt 297  Q
    |||| ||||||| || |||||||| ||||||||||||||| || || |||| | || |||||||| ||||||||| || ||| |||| ||| |||| | |    
T  22333656 ttattagaaaaaattgactttttagattcattgagtaattaatata-cttgatatataatatagatcaaatacattatttatgcaatgaatcaaaaaagt 22333558  T
Q  298 taaatatttcttataaatagga 319  Q
    | ||| ||||||||||||||||    
T  22333557 ttaatgtttcttataaatagga 22333536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 306
Target Start/End: Complemental strand, 5281311 - 5281202
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || |||||||| ||| |||  |||||| |||||| | || || |||||||| |||||||||||| ||| |||| ||| |||| |    
T  5281311 tatttataagaaaaagttgactttttatatt-attttgtaattaatgtatttggtataaaatatagatcaaatacatcatttatgcaatgaatcaaaaaa 5281213  T
Q  296 tttaaatattt 306  Q
     | ||||||||    
T  5281212 gtcaaatattt 5281202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 37670351 - 37670429
Alignment:
Q  215 actttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaa 293  Q
    |||||||| ||  ||||| ||||||||| ||||| ||||||||||| |||||||| || || ||| |||| ||||||||    
T  37670351 actttttagatatattgaataattgatgcatcttatctagaatatataccaaatagattatttatgcaatgaattaaaa 37670429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 41205494 - 41205580
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    ||||||||||||||||||||| ||| || | |||||| ||  ||||| ||||| |||||||| ||  | |||||| |||||||||||    
T  41205494 ccttcggtcttatttataagagaaagttgattttttagatatattgaataatttatgtatctagtaaaaaatataaaccaaatacat 41205580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 4740850 - 4740793
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatct 247  Q
    |||||||||||| |||| ||| |||||||||||||| |||||| ||||  ||||||||    
T  4740850 cggtcttatttacaagagaaagttaactttttaaatacattgaataatgtatgtatct 4740793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 234 - 275
Target Start/End: Complemental strand, 12397159 - 12397118
Alignment:
Q  234 taattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    ||||||||||||||||||||  ||||||||||||| ||||||    
T  12397159 taattgatgtatcttgtctaagatatagaccaaatgcatcat 12397118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 6e-36; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 187 - 332
Target Start/End: Complemental strand, 17265864 - 17265719
Alignment:
Q  187 cttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataa 286  Q
    |||||||| |||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||| ||| |||| |    
T  17265864 cttcggtcatatttataagaaaaatttgattttttaaattcatcgagtaattgatgtatcttgtctagaatatagactaaatacgtcatttatgcaatga 17265765  T
Q  287 attaaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    || |||| | | |||| ||||||||||||||||  ||| |||||||    
T  17265764 atcaaaaaagtcaaatgtttcttataaataggatcggaaggagtat 17265719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 30627831 - 30627958
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    |||||||||||||||||||||||| | |||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| |||     
T  30627831 cggtcttatttataagaaaaatttgattttttatatttattgagtaattgatgtatcttgtctaaaatatagaccaaatacatcatttatgcaatgaatc 30627930  T
Q  290 aaaacatttaaatatttcttataaatag 317  Q
    | || | | |||| ||||||||||||||    
T  30627931 agaaaagtcaaatgtttcttataaatag 30627958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 196 - 332
Target Start/End: Original strand, 3064897 - 3065033
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| ||| ||||||| ||||||||  ||||| ||||||||||| || ||||||||||||||||| ||| ||| |||| ||| |||| |    
T  3064897 tatttataagaaaaaattatctttttagattcattgtataattaatgtatcttgtataaaatatagaccaaatacaccatttatgcaatgaatcaaaaaa 3064996  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | |||||||||||||||||||||| |||||||||||    
T  3064997 gtaaaatatttcttataaataggaccggagggagtat 3065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 190 - 322
Target Start/End: Original strand, 28630761 - 28630893
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| |||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||| || ||| |||| |||     
T  28630761 cggtcctatttataagaaaaatttgactttttttattcattgagtaattgatgtatcttgtctataatatagaccaaatacataatttatgcaatgaatc 28630860  T
Q  290 aaaacatttaaatatttcttataaataggactg 322  Q
     ||| | | || | |||||||||||||||||||    
T  28630861 taaaaagtcaattgtttcttataaataggactg 28630893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 190 - 275
Target Start/End: Complemental strand, 2230489 - 2230404
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    ||||| |||||||||||||| ||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  2230489 cggtcctatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctagaatatagaccaagtacatcat 2230404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 196 - 331
Target Start/End: Original strand, 8052869 - 8053005
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaatt-gatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaac 294  Q
    |||||||||||||| ||| ||||||||||| |||||| || || |||||||||||||||||||| |||| |||||||| || | |||||| ||||||||     
T  8052869 tatttataagaaaattttgactttttaaatgcattgaatattttgatgtatcttgtctagaataaagactaaatacattatttgtacaatgaattaaaaa 8052968  T
Q  295 atttaaatatttcttataaataggactggagggagta 331  Q
    | | |||||||||||||||||| ||| ||||| ||||    
T  8052969 agtcaaatatttcttataaatatgaccggaggaagta 8053005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 2810083 - 2810228
Alignment:
Q  186 ccttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaata 285  Q
    ||||||||| ||||||||| ||||| |||| |||||| ||||||| | ||||||||||| || |||||||| |||| |||||||||||| |||| ||||     
T  2810083 ccttcggtcctatttataaaaaaaagttaattttttagattcattcaataattgatgtacctagtctagaa-atagtccaaatacatcaactattcaatg 2810181  T
Q  286 aattaaaacatttaaatatttcttataaataggactggagggagtat 332  Q
    ||| |||| | | || ||||||||||| ||||||| |||||||||||    
T  2810182 aatgaaaaaagtaaattatttcttatatataggaccggagggagtat 2810228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 190 - 315
Target Start/End: Original strand, 12450359 - 12450484
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    |||||| ||||||||||||  |||||||||||  ||||||||| |||||||||||| || |||| ||||||||  ||||||||||| ||| |||| ||||    
T  12450359 cggtctaatttataagaaatgtttaactttttggattcattgaataattgatgtattttatctaaaatatagattaaatacatcatttatgcaatgaatt 12450458  T
Q  290 aaaacatttaaatatttcttataaat 315  Q
    |||| | | |||||||||||||||||    
T  12450459 aaaaaagtcaaatatttcttataaat 12450484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 199 - 332
Target Start/End: Original strand, 28863337 - 28863470
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacattt 298  Q
    |||||||| ||| || | ||||||  |||||||  ||||| ||||||||||||||||||||| |||||||||||||| ||| |||||||| |||  ||||    
T  28863337 ttataagataaaattgattttttagtttcattgtataatttatgtatcttgtctagaatataaaccaaatacatcatttatgcaataaatcaaagaattt 28863436  T
Q  299 aaatatttcttataaataggactggagggagtat 332  Q
    |||| |||||||||||||| || ||| |||||||    
T  28863437 aaatgtttcttataaatagaaccggatggagtat 28863470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 220 - 328
Target Start/End: Original strand, 9077624 - 9077732
Alignment:
Q  220 ttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaatagga 319  Q
    ||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||| ||| |||| ||| |||| | | |||||||||||||||||| ||    
T  9077624 ttaaatttattgtgtaattaatgtatcttgtctagaatatagaccaaatgcatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaataaga 9077723  T
Q  320 ctggaggga 328  Q
    | |||||||    
T  9077724 ccggaggga 9077732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 196 - 331
Target Start/End: Complemental strand, 33120036 - 33119903
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    |||||||||||||| ||| |||||||| ||||||||| |||| |||||||||||||   ||||||||||||||||| ||| |||||||| ||| |||  |    
T  33120036 tatttataagaaaattttgactttttagattcattgaataatcgatgtatcttgtc--aaatatagaccaaatacaacatttatacaatgaatcaaagaa 33119939  T
Q  296 tttaaatatttcttataaataggactggagggagta 331  Q
     | |||| ||||||||||||||||| | ||||||||    
T  33119938 gtcaaatgtttcttataaataggaccgaagggagta 33119903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 2972172 - 2972275
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||| |||||| |||||||| ||| |||||||||||| |||||||| |||| ||||||||| ||||||||||| ||| |||| |||     
T  2972172 cggtcttatttataagagaaatttgactttttagatttattgagtaattggtgtatcttatctaaaatatagacaaaatacatcatttatgcaatgaatc 2972271  T
Q  290 aaaa 293  Q
    ||||    
T  2972272 aaaa 2972275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 10283434 - 10283308
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| |||||||||| |||| |||| |||||||||| ||||||||||||||||||  |||||| |||||| | |||||||||||| ||||| || |||     
T  10283434 cggtcctatttataagcaaaaattaattttttaaatttattgagtaattgatgtatactgtctaaaatatatatcaaatacatcatttataccatgaatc 10283335  T
Q  290 aaaacatttaaatatttcttataaata 316  Q
    |||| | | |||||||| |||||||||    
T  10283334 aaaaaagtcaaatattttttataaata 10283308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 196 - 332
Target Start/End: Original strand, 30895198 - 30895334
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| || | |||||||||||||||   |||| |||||  | || |||||||||||||||||| ||||| ||| |||| ||| |||| |    
T  30895198 tatttataagaaaaagttgaatttttaaattcattggacaattaatgtacttggtatagaatatagaccaaatatatcatttatgcaatgaatcaaaaaa 30895297  T
Q  296 tttaaatatttcttataaataggactggagggagtat 332  Q
     | |||| ||||||||||||| ||||||| |||||||    
T  30895298 gtcaaatgtttcttataaataagactggatggagtat 30895334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 27909007 - 27909124
Alignment:
Q  215 actttttaaattca-ttgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataa 313  Q
    |||||||| ||||| ||||||||||||||||||  ||||| |||||||| |||||||||||  ||| |||| |||||||| | | |||| |||||| |||    
T  27909007 actttttagattcaattgagtaattgatgtatccggtctaaaatatagatcaaatacatcaattattcaatgaattaaaaaagtcaaatgtttcttgtaa 27909106  T
Q  314 ataggactggagggagta 331  Q
    |||||||  |||||||||    
T  27909107 ataggaccagagggagta 27909124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 189 - 316
Target Start/End: Original strand, 7649806 - 7649935
Alignment:
Q  189 tcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaat 288  Q
    |||||||||||||||| ||| | ||| ||||||| ||||||||| |||||||||||| | ||||| |||||| |||||||| ||||  ||| |||| |||    
T  7649806 tcggtcttatttataataaataattatctttttagattcattgaataattgatgtatttggtctaaaatatataccaaataaatcaattattcaatgaat 7649905  T
Q  289 t--aaaacatttaaatatttcttataaata 316  Q
    |  |||| | |||| ||||||||| |||||    
T  7649906 ttaaaaaaaattaattatttcttagaaata 7649935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 1158379 - 1158303
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    |||||| |||||| | || ||||||||||| |||||| |||||||||||| | |||||||||||||||| |||||||    
T  1158379 tatttacaagaaataattgactttttaaatacattgaataattgatgtatttggtctagaatatagaccgaatacat 1158303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 193 - 316
Target Start/End: Complemental strand, 12999893 - 12999769
Alignment:
Q  193 tcttatttataagaaaaatttaactttttaa-attcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaa 291  Q
    ||||||||||||| |||| || ||||||| | ||||||||||||||| |||||  | || ||||||||||| |||||||||| | ||| |||| ||| ||    
T  12999893 tcttatttataagtaaaagttgactttttcagattcattgagtaattaatgtacttggtatagaatatagatcaaatacatcttttatgcaatgaatcaa 12999794  T
Q  292 aacatttaaatatttcttataaata 316  Q
    || | |||||| |||||| ||||||    
T  12999793 aaaagttaaatgtttcttgtaaata 12999769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 263
Target Start/End: Complemental strand, 17705999 - 17705929
Alignment:
Q  193 tcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagac 263  Q
    |||||||||||||||||| || ||||||| |||| |||| || ||||||||||||||| || |||||||||    
T  17705999 tcttatttataagaaaaaattgactttttgaattgattgcgtgattgatgtatcttgtttaaaatatagac 17705929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 274
Target Start/End: Complemental strand, 1837093 - 1837016
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    ||||||||||||||| |||| |||||| ||| ||| | ||||||||||| || | |||||| |||||||||||||||||    
T  1837093 tatttataagaaaaagttaattttttagatttattcaataattgatgtacctagcctagaa-atagaccaaatacatca 1837016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 275
Target Start/End: Original strand, 10753637 - 10753709
Alignment:
Q  200 tataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    |||| |||||| || |||||||| |||||||||||||| ||||||| | ||||   ||||||||||||||||||||    
T  10753637 tatatgaaaaagttgactttttatattcattgagtaatcgatgtatttggtct---atatagaccaaatacatcat 10753709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 5483867 - 5483951
Alignment:
Q  188 ttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    ||||||| |||||| || ||| |||| |||||||||||| ||| | |||||||||||| ||||||| | | ||||| ||||||||    
T  5483867 ttcggtcctatttacaataaatatttgactttttaaatttattaaataattgatgtattttgtctatattttagactaaatacat 5483951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 331
Target Start/End: Original strand, 30438760 - 30438892
Alignment:
Q  199 ttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacattt 298  Q
    |||||||||||| || |||||||| |||||| || ||||| |||||| || |    ||||||||| | ||||||||  |||||||||||  |||| | ||    
T  30438760 ttataagaaaaagttgactttttagattcatagaataattaatgtattttattgtaaatatagactagatacatcacttatacaataaaccaaaaaagtt 30438859  T
Q  299 aaatatttcttataaataggactggagggagta 331  Q
    || ||||||||||||  ||||  ||||||||||    
T  30438860 aattatttcttataataaggatcggagggagta 30438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 331
Target Start/End: Complemental strand, 8646812 - 8646678
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    ||||||||||||||| ||| ||||||| ||| ||| | ||||||||||| ||    ||||| ||||||||||| ||||| |||| |||| ||| |||| |    
T  8646812 tatttataagaaaaagttatctttttagatttatttaataattgatgtacctaacttagaa-atagaccaaatgcatcaactattcaatgaatcaaaaaa 8646714  T
Q  296 tttaaatatttcttataaataggactggagggagta 331  Q
     | || ||||||||||| |||| || |||| |||||    
T  8646713 gtaaattatttcttatatatagaaccggagcgagta 8646678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 1158273 - 1158383
Alignment:
Q  210 atttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttctt 309  Q
    ||||||||||||| ||||||||| ||||| ||||||   ||||| | | ||||||||||||||||  ||| ||||  ||| ||| | | || ||||||||    
T  1158273 atttaactttttagattcattgaataattaatgtattcggtctatattctagaccaaatacatcaattattcaatgtatttaaaaagtcaattatttctt 1158372  T
Q  310 ataaataggac 320  Q
     ||||||||||    
T  1158373 gtaaataggac 1158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 27909114 - 27909060
Alignment:
Q  191 ggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtat 245  Q
    |||| |||||| |||||| |||| ||||||| |||||||||| ||||||||||||    
T  27909114 ggtcctatttacaagaaacatttgacttttttaattcattgaataattgatgtat 27909060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 187 - 329
Target Start/End: Complemental strand, 28630896 - 28630754
Alignment:
Q  187 cttcggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataa 286  Q
    |||| ||| ||||||||||||| | || |||||||| ||||||||  ||| | |||||| | ||||| | ||||||| | ||||||||  ||  |||| |    
T  28630896 cttcagtcctatttataagaaacaattgactttttagattcattgcataaattatgtatttggtctatattatagacaagatacatcaattactcaatga 28630797  T
Q  287 attaaaacatttaaatatttcttataaataggactggagggag 329  Q
    || |||| | | |||| ||||||||||||||||| ||| ||||    
T  28630796 ataaaaaaagtcaaatttttcttataaataggaccggaaggag 28630754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 3046652 - 3046706
Alignment:
Q  217 tttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    |||||||||||||||||||||||    |||| ||||| ||||||||||| |||||||||    
T  3046652 tttttaaattcattgagtaattg----atctggtctacaatatagaccacatacatcat 3046706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 7649943 - 7649855
Alignment:
Q  188 ttcggtcttatttataagaaaaatttaacttttt--aaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatca 274  Q
    ||||||||||||| ||||||| | |||| |||||  ||||||||||| |||||||| ||| | || || | | ||||||||||||||||    
T  7649943 ttcggtcttatttctaagaaataattaattttttttaaattcattgaataattgatttatttggtatatattttagaccaaatacatca 7649855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 25538088 - 25538047
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattg 231  Q
    ||||||||||||||||||| ||||||||||||  ||||||||    
T  25538088 cggtcttatttataagaaatatttaacttttttgattcattg 25538047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 194 - 333
Target Start/End: Original strand, 16541 - 16680
Alignment:
Q  194 cttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaa 293  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||||| ||| ||||    
T  16541 cttatttataagaaaaatttaacttttttaattcattgagtaattgatgcatcttgactagaatatagaccaaatacattatttatacaatgaatcaaaa 16640  T
Q  294 catttaaatatttcttataaataggactggagggagtata 333  Q
     | | |||  ||||||||||||| ||| | | ||||||||    
T  16641 aagtcaaacgtttcttataaataagaccgaacggagtata 16680  T

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Target: scaffold0123 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 190 - 316
Target Start/End: Complemental strand, 28229 - 28101
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaat- 288  Q
    ||||| ||| |||||||||||||| |||||| ||||| ||||| |||||||| ||||||||||| |||||||| |||||||||||| ||| |||| |||     
T  28229 cggtcctatatataagaaaaatttgacttttaaaatttattgaataattgatatatcttgtctaaaatatagatcaaatacatcatttatgcaatgaatc 28130  T
Q  289 -taaaacatttaaatatttcttataaata 316  Q
      |||| | ||||||||||||||||||||    
T  28129 acaaaaaagttaaatatttcttataaata 28101  T

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Target: scaffold0001 (Bit Score: 58; Significance: 6e-24; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 190 - 331
Target Start/End: Complemental strand, 156908 - 156767
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||| ||||||||||||||| |  | ||||||  |||||||||||||| |||||  | || |||||||||||||||||| ||| | ||| |||| ||||    
T  156908 cggtcctatttataagaaaaaatagattttttagtttcattgagtaattaatgtacttggtatagaatatagaccaaatatatcgtttatgcaatgaatt 156809  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagta 331  Q
    |||| | |||||| ||||||||||||||||| ||||||||||    
T  156808 aaaaaagttaaatgtttcttataaataggaccggagggagta 156767  T

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Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 149065 - 149001
Alignment:
Q  38 gaaagtttttctgaggatgaagttgatatgattctaaggttacacaagctcctagggaacaggta 102  Q
    ||||| ||| ||||||||||||| |||||||| |||||||||||||| || |||||||| |||||    
T  149065 gaaagctttgctgaggatgaagtcgatatgatcctaaggttacacaaacttctagggaataggta 149001  T

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Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 156776 - 156817
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattg 231  Q
    ||||| ||||||||||||| |||||||||||| |||||||||    
T  156776 cggtcctatttataagaaacatttaacttttttaattcattg 156817  T

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Target: scaffold0236 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 272
Target Start/End: Complemental strand, 16788 - 16709
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 272  Q
    ||||| ||||||||||||||||| |    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16788 cggtcctatttataagaaaaattgac---tttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacat 16709  T

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Target: scaffold0767 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 3731 - 3802
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatag 261  Q
    ||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||| |||||||||||||||    
T  3731 cggtcttatatataagaaaaatttgactttttacatttattgagtaattgatgtattttgtctagaatatag 3802  T

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Target: scaffold0110 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 190 - 331
Target Start/End: Complemental strand, 1672 - 1532
Alignment:
Q  190 cggtcttatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaatt 289  Q
    ||||||||||||||||||||| |||| |||||| ||||||||| |||||||||||| | ||||||| |||||| ||||| |||||| ||| |||  |||     
T  1672 cggtcttatttataagaaaaaattaattttttagattcattgaataattgatgtat-tagtctagagtatagatcaaatgcatcatttatgcaacgaatc 1574  T
Q  290 aaaacatttaaatatttcttataaataggactggagggagta 331  Q
    |||| | | |||| |||  |||||||||||| ||||| ||||    
T  1573 aaaaaagtcaaatgttttatataaataggaccggaggaagta 1532  T

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Target: scaffold0028 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 220 - 319
Target Start/End: Complemental strand, 71959 - 71860
Alignment:
Q  220 ttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaatagga 319  Q
    |||||||||||| |||||| |||||| |||| || ||||||||| |||||||| || |||||||| ||| |||| | |||||  ||||||||||||||||    
T  71959 ttaaattcattgtgtaattaatgtattttgtataaaatatagactaaatacataatttatacaatgaatcaaaaaaattaaaattttcttataaatagga 71860  T

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Target: scaffold0023 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 90123 - 90195
Alignment:
Q  19 aaaccccaccattaatagagaaagtttttctgaggatgaagttgatatgattctaaggttacacaagctccta 91  Q
    |||||| ||||| || | |||||| |||||||||||||||||||||||||| ||||||||||| || ||||||    
T  90123 aaacccaaccatcaacaaagaaagattttctgaggatgaagttgatatgatcctaaggttacaaaaactccta 90195  T

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Target: scaffold0070 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 196 - 275
Target Start/End: Original strand, 40159 - 40238
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    |||||||||| |||| |||||| |||| |||||||  |||||||||||||||  | || |||||||||||||||||||||    
T  40159 tatttataaggaaaaattaactctttagattcattatgtaattgatgtatctgatataaaatatagaccaaatacatcat 40238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 302
Target Start/End: Original strand, 16521 - 16626
Alignment:
Q  196 tatttataagaaaaatttaactttttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaaca 295  Q
    |||||| |||||||| |||| |||||| ||||||| | ||||||||||| || | |||||| ||||||||||||||||| |||| |||| ||| |||| |    
T  16521 tatttacaagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 16619  T
Q  296 tttaaat 302  Q
     ||||||    
T  16620 attaaat 16626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 21950 - 22009
Alignment:
Q  43 tttttctgaggatgaagttgatatgattctaaggttacacaagctcctagggaacaggta 102  Q
    ||||||| |||||||||||||| ||||||||||||||||||| || ||||| || |||||    
T  21950 tttttctaaggatgaagttgatttgattctaaggttacacaaccttctaggcaataggta 22009  T

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Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 232 - 275
Target Start/End: Original strand, 1487 - 1530
Alignment:
Q  232 agtaattgatgtatcttgtctagaatatagaccaaatacatcat 275  Q
    |||||||||| |||||||||||||||||||| ||||||||||||    
T  1487 agtaattgatatatcttgtctagaatatagatcaaatacatcat 1530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 24366 - 24424
Alignment:
Q  44 ttttctgaggatgaagttgatatgattctaaggttacacaagctcctagggaacaggta 102  Q
    |||||| ||||||||| |||| | ||| ||||||||||||| ||||||||||| |||||    
T  24366 ttttctaaggatgaagctgatttaattttaaggttacacaacctcctagggaataggta 24424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 320
Target Start/End: Complemental strand, 5382 - 5282
Alignment:
Q  219 tttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatctatacaataaattaaaacatttaaatatttcttataaatagg 318  Q
    |||| ||| ||||||||||| |||||   | | ||||||||||||||||||||| || ||| |||| || ||||| | | |||| |||||||||||||||    
T  5382 tttagatttattgagtaattaatgtactatatatagaatatagaccaaatacataatttatgcaatcaa-taaaaaagtcaaatgtttcttataaatagg 5284  T
Q  319 ac 320  Q
    ||    
T  5283 ac 5282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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