View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5674_high_14 (Length: 235)
Name: NF5674_high_14
Description: NF5674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5674_high_14 |
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Alignment Details
Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 31597294 - 31597524
Alignment:
| Q |
1 |
tagagtaagataaatatattatttttatgcagtttacttgaacctataattcaagcatgcatgtggtaatatctttagaatttaattagtataccctatc |
100 |
Q |
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| T |
31597294 |
tagagtaagataaatatattatttttatgcagtttacttgaacctataattcaagcatgcatgtggtaatatctttagaatttaattagtataccctatc |
31597393 |
T |
|
| Q |
101 |
attttacaattactttacacatgattaatgaatatgaaaactcatattcattaattaccttgacaatacatcattaaagaatatttaaaataagggtctt |
200 |
Q |
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| T |
31597394 |
attgtacaattactttacacatgattaatgaatatgaaaactcatattcattaattaccttgacaacacatcattaaagaatatttaaaataagggtctt |
31597493 |
T |
|
| Q |
201 |
gttaataaatgctctaaggacacttgttaag |
231 |
Q |
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||||| |||||||||||| |||||||||||| |
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| T |
31597494 |
gttaacaaatgctctaagaacacttgttaag |
31597524 |
T |
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