View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5676_high_58 (Length: 206)
Name: NF5676_high_58
Description: NF5676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5676_high_58 |
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Alignment Details
Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 38265635 - 38265806
Alignment:
| Q |
12 |
tgagatgaaagagaatcacaggtttaaggagttgttgataatggtggatacttgtcaagctgctactcttttctcagaccttcgttcacctggtgtttta |
111 |
Q |
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| T |
38265635 |
tgagatgaaagagaatcacaggtttaaggagttgttgataatggtggatacttgtcaagctgctactcttttctcagaccttcgttcacctggtgtttta |
38265734 |
T |
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| Q |
112 |
gctattggaagtagtttgaaaggagagagttcgtattcacatcattttgattcggatttgggtgtttctgtc |
183 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |
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| T |
38265735 |
gctattggaagtagtgtgaaaggagagagttcgtattcacatcattctgatttggatttgggtgtttctgtc |
38265806 |
T |
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