View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5676_low_41 (Length: 248)

Name: NF5676_low_41
Description: NF5676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5676_low_41
NF5676_low_41
[»] chr3 (34 HSPs)
chr3 (113-192)||(52708587-52708666)
chr3 (113-192)||(42446536-42446615)
chr3 (116-192)||(39820574-39820650)
chr3 (122-192)||(45268540-45268610)
chr3 (139-192)||(42447757-42447810)
chr3 (116-191)||(52401030-52401105)
chr3 (113-190)||(52403096-52403173)
chr3 (116-192)||(40477344-40477420)
chr3 (116-187)||(40476234-40476305)
chr3 (115-178)||(46027401-46027464)
chr3 (116-174)||(53121315-53121373)
chr3 (116-192)||(9855191-9855266)
chr3 (116-192)||(39819325-39819401)
chr3 (113-177)||(43641153-43641217)
chr3 (116-192)||(45267318-45267394)
chr3 (116-192)||(48035702-48035778)
chr3 (129-192)||(46106735-46106797)
chr3 (116-192)||(47433781-47433855)
chr3 (113-192)||(977815-977895)
chr3 (116-164)||(20489356-20489404)
chr3 (116-164)||(22508748-22508796)
chr3 (116-192)||(54437437-54437513)
chr3 (129-192)||(32635620-32635683)
chr3 (116-183)||(37845418-37845485)
chr3 (129-192)||(51004168-51004231)
chr3 (116-162)||(46026089-46026135)
chr3 (116-162)||(46104356-46104402)
chr3 (113-162)||(4705691-4705740)
chr3 (113-162)||(11914833-11914882)
chr3 (113-162)||(32637188-32637237)
chr3 (116-164)||(20488379-20488427)
chr3 (113-192)||(976790-976869)
chr3 (116-191)||(20585615-20585690)
chr3 (113-163)||(55346315-55346365)
[»] chr8 (33 HSPs)
chr8 (116-192)||(28996847-28996923)
chr8 (113-192)||(22533327-22533406)
chr8 (116-191)||(28997964-28998039)
chr8 (113-192)||(22534692-22534771)
chr8 (113-192)||(36588232-36588311)
chr8 (113-192)||(38456700-38456779)
chr8 (113-164)||(10717131-10717182)
chr8 (113-162)||(10718448-10718497)
chr8 (113-190)||(22272242-22272319)
chr8 (116-192)||(10292829-10292904)
chr8 (113-192)||(4182632-4182711)
chr8 (116-192)||(1376948-1377024)
chr8 (116-192)||(1385525-1385601)
chr8 (128-192)||(41357336-41357400)
chr8 (113-192)||(4183949-4184028)
chr8 (113-160)||(45517962-45518009)
chr8 (113-191)||(38658491-38658568)
chr8 (113-191)||(30124192-30124272)
chr8 (116-183)||(10293804-10293871)
chr8 (116-191)||(14197838-14197912)
chr8 (113-191)||(39440395-39440471)
chr8 (113-192)||(41846657-41846735)
chr8 (116-158)||(3483646-3483688)
chr8 (116-178)||(41354484-41354546)
chr8 (139-192)||(14711568-14711621)
chr8 (116-164)||(1420440-1420488)
chr8 (141-177)||(18326549-18326585)
chr8 (113-164)||(22270953-22271004)
chr8 (116-190)||(39439937-39440009)
chr8 (113-191)||(3030406-3030484)
chr8 (116-162)||(34904509-34904555)
chr8 (113-192)||(41847148-41847229)
chr8 (128-164)||(36589385-36589421)
[»] chr7 (28 HSPs)
chr7 (116-192)||(12385678-12385753)
chr7 (117-192)||(42255872-42255947)
chr7 (122-192)||(41694925-41694995)
chr7 (113-192)||(17066435-17066513)
chr7 (113-192)||(24197073-24197152)
chr7 (116-192)||(5611477-5611553)
chr7 (116-192)||(43869882-43869958)
chr7 (113-191)||(42254968-42255046)
chr7 (116-177)||(31848129-31848190)
chr7 (116-164)||(24195620-24195668)
chr7 (113-192)||(32197878-32197958)
chr7 (113-164)||(11217069-11217120)
chr7 (136-191)||(39618688-39618743)
chr7 (116-190)||(35212081-35212154)
chr7 (118-171)||(554260-554313)
chr7 (116-164)||(38742194-38742242)
chr7 (113-164)||(12933429-12933480)
chr7 (116-163)||(32544773-32544820)
chr7 (116-191)||(41693658-41693733)
chr7 (113-191)||(40576776-40576854)
chr7 (116-169)||(13418963-13419016)
chr7 (113-162)||(32543490-32543539)
chr7 (113-192)||(5610166-5610246)
chr7 (116-164)||(31489933-31489981)
chr7 (116-191)||(31853561-31853635)
chr7 (122-192)||(43066020-43066092)
chr7 (128-192)||(36749217-36749281)
chr7 (113-153)||(39619800-39619840)
[»] scaffold0106 (2 HSPs)
scaffold0106 (113-192)||(29739-29818)
scaffold0106 (116-186)||(30884-30953)
[»] scaffold0001 (2 HSPs)
scaffold0001 (113-192)||(120955-121034)
scaffold0001 (113-192)||(119603-119682)
[»] scaffold0765 (1 HSPs)
scaffold0765 (116-192)||(1873-1949)
[»] chr5 (17 HSPs)
chr5 (116-192)||(27571099-27571175)
chr5 (116-164)||(3936591-3936639)
chr5 (116-192)||(4565406-4565482)
chr5 (116-192)||(6893980-6894056)
chr5 (116-192)||(34911799-34911874)
chr5 (113-192)||(4777650-4777729)
chr5 (113-192)||(15599775-15599854)
chr5 (113-192)||(25254101-25254180)
chr5 (113-192)||(25317891-25317970)
chr5 (128-192)||(15604029-15604092)
chr5 (113-164)||(3938058-3938109)
chr5 (116-192)||(14809176-14809252)
chr5 (116-164)||(3954065-3954113)
chr5 (128-192)||(4778810-4778874)
chr5 (116-192)||(27570069-27570145)
chr5 (113-164)||(3205100-3205151)
chr5 (116-162)||(31540509-31540555)
[»] chr4 (23 HSPs)
chr4 (116-192)||(42359316-42359392)
chr4 (113-164)||(45618295-45618346)
chr4 (113-192)||(19675592-19675669)
chr4 (116-192)||(32699284-32699360)
chr4 (116-192)||(42358045-42358121)
chr4 (113-192)||(19674424-19674502)
chr4 (116-164)||(22204068-22204116)
chr4 (116-192)||(33137198-33137274)
chr4 (113-163)||(3879096-3879146)
chr4 (116-164)||(3880494-3880542)
chr4 (122-162)||(40198593-40198633)
chr4 (113-164)||(17281581-17281632)
chr4 (116-191)||(17326705-17326780)
chr4 (113-164)||(17370083-17370134)
chr4 (116-191)||(55542550-55542625)
chr4 (113-162)||(17371845-17371894)
chr4 (116-164)||(41933831-41933879)
chr4 (116-164)||(45619729-45619777)
chr4 (116-164)||(54121698-54121746)
chr4 (116-154)||(41935078-41935116)
chr4 (113-158)||(34659716-34659761)
chr4 (113-161)||(16573388-16573436)
chr4 (116-192)||(29059726-29059802)
[»] chr1 (33 HSPs)
chr1 (116-192)||(24609932-24610008)
chr1 (116-192)||(24611087-24611163)
chr1 (116-192)||(27816690-27816766)
chr1 (116-192)||(47038879-47038955)
chr1 (113-164)||(9774886-9774937)
chr1 (116-191)||(27264187-27264262)
chr1 (116-191)||(46075021-46075096)
chr1 (119-192)||(27815457-27815530)
chr1 (116-192)||(9774050-9774126)
chr1 (116-192)||(17977529-17977605)
chr1 (116-192)||(20723658-20723734)
chr1 (116-192)||(26863873-26863949)
chr1 (113-164)||(20722482-20722533)
chr1 (113-192)||(37396810-37396889)
chr1 (116-178)||(27262921-27262983)
chr1 (116-192)||(26865154-26865230)
chr1 (113-192)||(35911858-35911937)
chr1 (113-164)||(39163022-39163073)
chr1 (116-170)||(35721114-35721168)
chr1 (113-191)||(46073895-46073972)
chr1 (116-187)||(11711232-11711299)
chr1 (116-192)||(11710566-11710642)
chr1 (116-164)||(17976774-17976822)
chr1 (116-192)||(23469939-23470015)
chr1 (116-164)||(24427367-24427415)
chr1 (113-165)||(34934744-34934796)
chr1 (116-192)||(37395646-37395722)
chr1 (113-161)||(50164413-50164461)
chr1 (113-192)||(30722126-30722205)
chr1 (147-190)||(50164535-50164578)
chr1 (116-192)||(13074546-13074620)
chr1 (116-177)||(35722270-35722331)
chr1 (113-158)||(48334136-48334181)
[»] chr6 (20 HSPs)
chr6 (113-192)||(34998110-34998190)
chr6 (116-191)||(17517280-17517355)
chr6 (113-192)||(21953216-21953295)
chr6 (116-192)||(20897469-20897543)
chr6 (113-162)||(21165256-21165305)
chr6 (116-164)||(18810545-18810593)
chr6 (113-192)||(34995124-34995203)
chr6 (113-190)||(20393239-20393317)
chr6 (116-192)||(3279470-3279545)
chr6 (116-191)||(17516175-17516250)
chr6 (116-191)||(25440645-25440719)
chr6 (116-162)||(26419526-26419572)
chr6 (116-186)||(30253515-30253585)
chr6 (116-192)||(3276380-3276454)
chr6 (113-162)||(20391224-20391273)
chr6 (113-158)||(29291369-29291414)
chr6 (116-192)||(1171622-1171697)
chr6 (116-164)||(16995464-16995512)
chr6 (115-158)||(17000281-17000324)
chr6 (116-169)||(1972413-1972466)
[»] chr2 (20 HSPs)
chr2 (116-192)||(25977883-25977959)
chr2 (116-191)||(1777482-1777557)
chr2 (116-174)||(2412416-2412474)
chr2 (116-192)||(36837750-36837824)
chr2 (116-164)||(25979249-25979297)
chr2 (116-190)||(23861765-23861838)
chr2 (113-164)||(1778788-1778839)
chr2 (116-191)||(19603751-19603825)
chr2 (131-192)||(36836497-36836555)
chr2 (116-182)||(12067041-12067107)
chr2 (116-192)||(23863020-23863096)
chr2 (116-191)||(4038855-4038930)
chr2 (113-192)||(21573946-21574025)
chr2 (128-163)||(30843669-30843704)
chr2 (116-192)||(30844521-30844594)
chr2 (122-163)||(11087068-11087109)
chr2 (128-192)||(11088650-11088714)
chr2 (128-164)||(20245303-20245339)
chr2 (116-164)||(29794315-29794363)
chr2 (116-192)||(43824176-43824252)
[»] scaffold0517 (2 HSPs)
scaffold0517 (113-192)||(10325-10404)
scaffold0517 (116-192)||(11492-11568)
[»] scaffold0009 (1 HSPs)
scaffold0009 (113-192)||(202589-202668)
[»] scaffold0002 (4 HSPs)
scaffold0002 (116-188)||(344950-345023)
scaffold0002 (116-191)||(374348-374423)
scaffold0002 (113-192)||(376339-376418)
scaffold0002 (116-162)||(345897-345943)
[»] scaffold0230 (1 HSPs)
scaffold0230 (116-164)||(429-477)
[»] scaffold0562 (1 HSPs)
scaffold0562 (113-163)||(9932-9982)
[»] scaffold0026 (1 HSPs)
scaffold0026 (128-185)||(72523-72580)
[»] scaffold0095 (1 HSPs)
scaffold0095 (113-191)||(42728-42804)
[»] scaffold0599 (1 HSPs)
scaffold0599 (113-162)||(6584-6633)
[»] scaffold0516 (1 HSPs)
scaffold0516 (116-192)||(1105-1181)


Alignment Details
Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 52708666 - 52708587
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  52708666 tgcttttggtccctgcaaatatagcgagtttgggttttggtctctggtaaaataaatttttgaaattcatccctgcaaaa 52708587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 42446536 - 42446615
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| ||||||| |||||||||||||||||||  | |||||| |||||||||||||||||||||||||||    
T  42446536 tgcttttggtccctgcaaatatggcgagtttgggttttggtcgatagtaaaagaaatttttgaaattcatccctgcaaaa 42446615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 39820650 - 39820574
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||  |||||||  |||||||||||||    
T  39820650 ttttggtccctgcaaatatagcgagtttgggttttggtccctggtaaaaaaaaaatttgaaaaacatccctgcaaaa 39820574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 45268610 - 45268540
Alignment:
Q  122 tccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  45268610 tccctgcaaatatagcaagtttgggttttggtccctggtaaaaaaaaattttgaaatccatccctgcaaaa 45268540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 42447810 - 42447757
Alignment:
Q  139 agtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42447810 agtttgggttttggtccctggtaaaataaaattttgaaattcatccctgcaaaa 42447757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 52401030 - 52401105
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||| |   |||||||| ||||||||||||||    
T  52401030 ttttggtccctgcaaatatggcgagtttgggttttggtccctggtaaattttttttttgaatttcatccctgcaaa 52401105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 52403173 - 52403096
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaa 190  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||  |   |||||||| |||||||||||||    
T  52403173 tgcttttggtccctgcaaatatggcgagtttgggttttggtccctggtaatttttttttttgaatttcatccctgcaa 52403096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 40477420 - 40477344
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||| ||||||||||||||||||||| ||||  |   ||||||||||||||||||||||||    
T  40477420 ttttggtccctgcaaatataacgagtttgggttttggtccctagtaatttttttttttgaaattcatccctgcaaaa 40477344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 40476234 - 40476305
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctg 187  Q
    ||||||||||| |||||||||||||||||| |||||||| || |||||| ||||  ||||||||||||||||    
T  40476234 ttttggtccctgcaaatatagcgagtttggattttggtctctagtaaaaaaaataattgaaattcatccctg 40476305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 46027464 - 46027401
Alignment:
Q  115 cttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaat 178  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||| ||| |||||||||    
T  46027464 cttttggtccctgcaaatatagcgagtttgaattttggtccctggtaaaaaaaagttttgaaat 46027401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 53121315 - 53121373
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttg 174  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  53121315 ttttggtccctgcaaatatagcgagtttgggttttagtccctggtaaaaaaaaattttg 53121373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 9855191 - 9855266
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||| |||||  ||||||||||||||||| ||||||||||| |||||| |||  ||||||||||||||||||||||    
T  9855191 ttttgatccctgtaaatatagcgagtttggattttggtccctagtaaaa-aaaaatttgaaattcatccctgcaaaa 9855266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 39819325 - 39819401
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||| |||||| |||||||||||||||||  |||||||||||||||||| |||   ||||||| |||||||||||||    
T  39819325 ttttagtccctgcaaatatagcgagtttgaattttggtccctggtaaaaaaaaaaattgaaatccatccctgcaaaa 39819401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 43641153 - 43641217
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaa 177  Q
    ||||||| |||||| |||||||||||||||||| || ||||||||||||||| ||| ||||||||    
T  43641153 tgcttttagtccctgcaaatatagcgagtttggattatggtccctggtaaaaaaaagttttgaaa 43641217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 45267318 - 45267394
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||| ||||| ||||||||||||||||| |||||||||||||||||  |   |||||||||| |||||||||||||    
T  45267318 ttttgatccctgcaaatatagcgagtttgagttttggtccctggtaatttttttttttgaaatccatccctgcaaaa 45267394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 48035778 - 48035702
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||| ||||| |||||||  ||||||||| ||||||||||||||||| |   ||||||||||||||||||||||||    
T  48035778 ttttgatccctgcaaatatgacgagtttggattttggtccctggtaaatttcttttttgaaattcatccctgcaaaa 48035702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 46106797 - 46106735
Alignment:
Q  129 aaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||||||||||||||||||||||||| |||   ||||||| |||||||||||||    
T  46106797 aaatatagcgagtttgggttttggtccctggtaaaa-aaaaaattgaaatccatccctgcaaaa 46106735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 47433855 - 47433781
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||||||| |||   |||||||  ||||||||||||    
T  47433855 ttttggtccctgcaaatatagcgaatttgagttttggtccctggtaaaaaaaa--attgaaatcaatccctgcaaaa 47433781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 977895 - 977815
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggt-aaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||||  ||||||||||||||||||| |||| |||| |||  |||||| | |||||||||||||    
T  977895 tgcttttggtccctgcaaatatgacgagtttgggttttggtccttggtaaaaaaaaaaatttgaagtccatccctgcaaaa 977815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 20489404 - 20489356
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  20489404 ttttggtccctgcaaatatgacgagtttgggttttggtccctggtaaaa 20489356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 22508748 - 22508796
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  22508748 ttttggtccctgcaaatatagcgagtttgagttttggtccttggtaaaa 22508796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 54437513 - 54437437
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||||| |||| |||||||||||| ||||  | | ||||| |||||||||| |||||||    
T  54437513 ttttggtccctgcaaatatagcgaatttgagttttggtccctagtaattttatttttttaaattcatccttgcaaaa 54437437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 32635620 - 32635683
Alignment:
Q  129 aaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||||||||||||||||||||||||||| |   ||||| |||| ||||| |||||||    
T  32635620 aaatatagcgagtttgggttttggtccctggtaaatttttttttttaaatccatccttgcaaaa 32635683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 37845418 - 37845485
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatc 183  Q
    |||||||| || ||||||||| |||||||  ||||||| || ||||||||||||||| ||||||||||    
T  37845418 ttttggtctctgcaaatatagtgagtttgtattttggttccaggtaaaataaattttcgaaattcatc 37845485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 51004168 - 51004231
Alignment:
Q  129 aaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||| |||| |||||||||||||||| | |||| |  |||||||||||||||||||||||||    
T  51004168 aaatatggcgaatttgggttttggtcccggataaattttatttttgaaattcatccctgcaaaa 51004231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 46026089 - 46026135
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  46026089 ttttggtccctgcaaatatagcgagtttggattttggtccctagtaa 46026135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 46104356 - 46104402
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  46104356 ttttggtccctgcaaatatagcgagtttgagtttttgtccctggtaa 46104402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 4705691 - 4705740
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    |||||||| ||||| ||||||| |||||||| ||||||||||||||||||    
T  4705691 tgcttttgatccctgcaaatatggcgagtttaggttttggtccctggtaa 4705740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 11914882 - 11914833
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    ||||||| |||||| |||||||||||| ||||||||||||| ||||||||    
T  11914882 tgcttttagtccctgcaaatatagcgaatttgggttttggtgcctggtaa 11914833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 32637237 - 32637188
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    ||||||||||||||  |||| |||||||||||||||||||| ||||||||    
T  32637237 tgcttttggtccctgtaaatgtagcgagtttgggttttggttcctggtaa 32637188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 20488379 - 20488427
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||||| ||||||| | || ||||||||||||||||||||||||    
T  20488379 ttttggtccctgcaaatatggtgaatttgggttttggtccctggtaaaa 20488427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 976790 - 976869
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||| ||||| |||||||||||| |||  ||||| |||||||||||||  | ||||||||||  |||| |||||||    
T  976790 tgcttttgatccctgcaaatatagcgaatttaagttttagtccctggtaaaaatattttttgaaatcaatccttgcaaaa 976869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 20585690 - 20585615
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||  |||  ||| ||||||| | || |||||||||    
T  20585690 ttttgatccctgcaaatatagcgagtttggattttggtccctgacaaataaaaattttgaattccagccctgcaaa 20585615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 55346365 - 55346315
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaa 163  Q
    ||||||| ||| || |||||||||||||||||  |||||||||||||||||    
T  55346365 tgcttttagtctctacaaatatagcgagtttgaattttggtccctggtaaa 55346315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 28996847 - 28996923
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  28996847 ttttggtccctgcaaatatagtgagtttgggttttggtccctggtaaaaaaaagttttgaaattcatccctgcaaaa 28996923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 22533327 - 22533406
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||||||  | |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  22533327 tgcttttggtccctgtatatatagcgagtttgggttttggtccctggtaaaaaaaatttttgaatttcatccctgcaaaa 22533406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 28998039 - 28997964
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  28998039 ttttggtccctgcaaatatagcgagtttgggttttggtccctagtaaaaaaaagttttgaaattcatccctgcaaa 28997964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 22534771 - 22534692
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||   |||||||| |||| ||||||||||    
T  22534771 tgcttttgatccctgcaaatatagcgagtttgggttttggtccctggtaaaatttttttttgaatttcaaccctgcaaaa 22534692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 36588232 - 36588311
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||  |||||| | |||||||||||||    
T  36588232 tgcttttggtccctgcaaatatagcgagtttgcgttttggtccctggtaaaaaaaaaatttgaattacatccctgcaaaa 36588311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 38456779 - 38456700
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||||||| | ||| |||||||||||||||||||| |||  ||||||||||||||||||||||    
T  38456779 tgcttttggtccctgcaaatatagcaaatttaggttttggtccctggtaaaaaaaaaatttgaaattcatccctgcaaaa 38456700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 10717131 - 10717182
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10717131 tgcttttggtccctgcaaatatagcgagtttgggttttggtccctggtaaaa 10717182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 10718497 - 10718448
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10718497 tgcttttggtccctgcaaatatagcgagtttgggttttggtccctggtaa 10718448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 22272319 - 22272242
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaa 190  Q
    |||||||||||||  |||||||||||| |||||||||||||||||||||||| |||  ||||||||  ||||||||||    
T  22272319 tgcttttggtccccgcaaatatagcgaatttgggttttggtccctggtaaaaaaaaaatttgaaatcaatccctgcaa 22272242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 10292829 - 10292904
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||||| |||| |||||| ||| || ||||| |||||||||||||||||||||||||||    
T  10292829 ttttggtcccttcaaatatagcgaatttgcgttttgatccttgataaaa-aaatttttgaaattcatccctgcaaaa 10292904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 4182632 - 4182711
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||||||| |||  ||||||||  ||||||| ||||    
T  4182632 tgcttttggtccctgtaaatatagcgaatttgggttttggtccctggtaaaaaaaaaatttgaaatcaatccctgtaaaa 4182711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 1376948 - 1377024
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||| | ||||| |||||||||||||||||| |||  ||||||||  ||||||||||||    
T  1376948 ttttggtccctgcaaatatagccaatttggattttggtccctggtaaaaaaaaaatttgaaatcaatccctgcaaaa 1377024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 1385601 - 1385525
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||| | ||||| |||||||||||||||||| |||  ||||||||  ||||||||||||    
T  1385601 ttttggtccctgcaaatatagccaatttggattttggtccctggtaaaaaaaaaatttgaaatcaatccctgcaaaa 1385525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 41357400 - 41357336
Alignment:
Q  128 caaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||| | ||||||||||||||||  ||||||||||||| ||||||||| |||||||||||||    
T  41357400 caaatatggtgagtttgggttttggtttctggtaaaataaaattttgaaatgcatccctgcaaaa 41357336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 4184028 - 4183949
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||| |||||| ||||||||| | ||||||||||||||||||||||| ||   ||||||||||  ||||||||||||    
T  4184028 tgcttttagtccctgcaaatatagtgcgtttgggttttggtccctggtaatatttttttttgaaatcgatccctgcaaaa 4183949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 160
Target Start/End: Complemental strand, 45518009 - 45517962
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggt 160  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  45518009 tgcttttggtccctgcaagtatagcgagtttgggttttggtccctggt 45517962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 38658491 - 38658568
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||| |||||| | |||||||||||| |||||||||||||||||||||||| |||   ||||||| ||||||||||||    
T  38658491 tgcttctggtccatgcaaatatagcgaatttgggttttggtccctggtaaaa-aaaaaattgaaatccatccctgcaaa 38658568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 30124272 - 30124192
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggt--aaaataaatttttgaaattcatccctgcaaa 191  Q
    |||||||||||||| |||||| ||| |||||| |||||||||||||||  |||| |||  |||||||| ||||||||||||    
T  30124272 tgcttttggtccctgcaaataaagcaagtttgagttttggtccctggtaaaaaaaaaaaatttgaaatccatccctgcaaa 30124192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 10293871 - 10293804
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatc 183  Q
    |||||||| || ||||||||| || |||  ||||||||| ||||||||||||| ||||||||||||||    
T  10293871 ttttggtctctgcaaatatagtgaatttaagttttggtcactggtaaaataaaattttgaaattcatc 10293804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 14197838 - 14197912
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||||||||| ||||||| |||||||||| ||||||||||| |||||| |||   ||||| ||||||||||||||    
T  14197838 ttttggtccctgcaaatatggcgagtttggattttggtccctagtaaaa-aaaaaattgaatttcatccctgcaaa 14197912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 39440471 - 39440395
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    |||||||||||| | ||||||| ||||||||| ||||||||||||| ||||| |||   ||||| ||||||||||||||    
T  39440471 tgcttttggtccttgcaaatatggcgagtttgagttttggtccctgataaaaaaaa--attgaatttcatccctgcaaa 39440395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 41846657 - 41846735
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||| ||||||  ||||||||  ||||||| |||||||| ||||||||| |||| || |||||||||||||||||||    
T  41846657 tgcttttagtccctgtaaatatagtaagtttggattttggtctctggtaaaaaaaatatt-gaaattcatccctgcaaaa 41846735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 3483646 - 3483688
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctg 158  Q
    ||||||||||| ||||||||||||||||| |||||||||||||    
T  3483646 ttttggtccctgcaaatatagcgagtttgagttttggtccctg 3483688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 41354484 - 41354546
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaat 178  Q
    ||||||||| |  ||||||||||||||||  ||||||| |||||||||||||| |||||||||    
T  41354484 ttttggtccttataaatatagcgagtttgaattttggttcctggtaaaataaaattttgaaat 41354546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 14711568 - 14711621
Alignment:
Q  139 agtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||| |||| ||||||||||||| |||  ||||||||||||||||||||||    
T  14711568 agtttggattttcgtccctggtaaaaaaaaaatttgaaattcatccctgcaaaa 14711621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 1420488 - 1420440
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||||| |||||||||||||||||| | |||||||||| |||||    
T  1420488 ttttggtccctgcaaatatagcgagtttggatattggtccctgataaaa 1420440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 18326549 - 18326585
Alignment:
Q  141 tttgggttttggtccctggtaaaataaatttttgaaa 177  Q
    |||||||||||||||||||||||| ||||||||||||    
T  18326549 tttgggttttggtccctggtaaaacaaatttttgaaa 18326585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 22270953 - 22271004
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||||||| ||||| |||||||||||| ||||| |||| |||||||||||||    
T  22270953 tgcttttgatccctgcaaatatagcgaatttggattttagtccctggtaaaa 22271004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 39439937 - 39440009
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaa 190  Q
    ||||||||||| ||||||| || |||||| ||||||| ||||||||||| |||   ||||| |||||||||||||    
T  39439937 ttttggtccctgcaaatatggctagtttgagttttggaccctggtaaaaaaaa--attgaatttcatccctgcaa 39440009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 3030406 - 3030484
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    |||||||||||||| |||||||  |   |||| |||||||| ||||||||||| | |||||||||| | ||||||||||    
T  3030406 tgcttttggtccctgcaaatatgactcatttgagttttggttcctggtaaaattattttttgaaatccgtccctgcaaa 3030484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 34904555 - 34904509
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    |||| |||||| |||||||||||| ||||||||||||| ||||||||    
T  34904555 ttttagtcccttcaaatatagcgaatttgggttttggttcctggtaa 34904509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 41847229 - 41847148
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaat--ttttgaaattcatccctgcaaaa 192  Q
    ||||||| ||| || |||||||||||| |||| ||||||||||||| |||  | |||  |||| ||||||||||||||||||    
T  41847229 tgcttttagtctctgcaaatatagcgaatttgagttttggtccctgataattttaattctttttaaattcatccctgcaaaa 41847148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 36589421 - 36589385
Alignment:
Q  128 caaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  36589421 caaatatagcgagtttaggttttggtccttggtaaaa 36589385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 12385753 - 12385678
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||| |||  ||||||||||||||||||||||    
T  12385753 ttttggtccctgcaaatatagcgagtttggattttggtccctggtaaaa-aaaaatttgaaattcatccctgcaaaa 12385678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 42255947 - 42255872
Alignment:
Q  117 tttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||| |||||||  |||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  42255947 tttggtccctgcaaatatgacgagtttgagttttggtccctggtaaaataaaattttgaaattcatccttgcaaaa 42255872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 41694995 - 41694925
Alignment:
Q  122 tccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| | ||||||||||| |||||||||||||    
T  41694995 tccctgcaaatatagcgagtttgagttttggtccctggtaaaaaatatttttgaaatccatccctgcaaaa 41694925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 17066435 - 17066513
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||  ||||| ||||||||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||    
T  17066435 tgcttttaatccctgcaaatatagcgagtttgggttttggtccctggtaaaa-aaaaaattgaaattcatccctgcaaaa 17066513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 24197152 - 24197073
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||||||||| |||| |||||||| |||||||||| ||| |||| |||||||||| |||||||    
T  24197152 tgcttttggtccctgcaaatatagcgaatttgagttttggttcctggtaaaaaaaaattttaaaattcatccttgcaaaa 24197073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 5611553 - 5611477
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| ||||||||||||||||||||||| |||||| |||||| |||   ||||||||| |||||||||||    
T  5611553 ttttggtccctgcaaatatagcgagtttgggttttcgtccctcgtaaaaaaaaaaattgaaattcgtccctgcaaaa 5611477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 43869958 - 43869882
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||| | |||||||||||||||||||||||||   ||||||||||  ||||||||||||    
T  43869958 ttttggtccctgcaaatatagccaatttgggttttggtccctggtaaaatttttttttgaaatcaatccctgcaaaa 43869882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 42254968 - 42255046
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||||||||||||  |||||| ||||||||| |||||||||||||||||| |   ||||||||||||||| |||||||    
T  42254968 tgcttttggtccctgtaaatatggcgagtttgagttttggtccctggtaaattttttttttgaaattcatctctgcaaa 42255046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 31848190 - 31848129
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaa 177  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  31848190 ttttagtccctgcaaatatagcgaatttgggttttggtccctggtaaaaaaaacttttgaaa 31848129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 24195620 - 24195668
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  24195620 ttttggtccctgcaaatatagcgagtttgggttttgctccctggtaaaa 24195668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 32197958 - 32197878
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggt-aaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||||||||| ||||||||||||||| |||| |||| ||| ||||||||  | |||||||||||    
T  32197958 tgcttttggtccctgcaaatatagcgaatttgggttttggtccttggtaaaaaaaaaattttgaaaagcgtccctgcaaaa 32197878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 11217120 - 11217069
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||    
T  11217120 tgcttttggtccctgcaaatatagcgagtttgaattttggtccctggtaaaa 11217069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 39618688 - 39618743
Alignment:
Q  136 gcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||||||||||||||||||||||||||| |||  |||||| ||||||||||||||    
T  39618688 gcgagtttgggttttggtccctggtaaaaaaaaaatttgaatttcatccctgcaaa 39618743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 35212081 - 35212154
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaa 190  Q
    ||||||||||| |||||||  |||||||||||||||||||||||||||| |||   ||||| |||||||||||||    
T  35212081 ttttggtccctgcaaatatgacgagtttgggttttggtccctggtaaaa-aaaaaattgaatttcatccctgcaa 35212154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 554260 - 554313
Alignment:
Q  118 ttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaattt 171  Q
    ||||||||| ||||||||||||||||||||||||||||| | ||||| ||||||    
T  554260 ttggtccctgcaaatatagcgagtttgggttttggtccccgataaaaaaaattt 554313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 38742194 - 38742242
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||| |||||| ||||||||||||||||||||||||||||| |||||||    
T  38742194 ttttagtccctgcaaatatagcgagtttgggttttggtccccggtaaaa 38742242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 12933429 - 12933480
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||||||||||||| ||||||||| |||||||  ||||||||||||||||||    
T  12933429 tgcttttggtccctgcaaatatagtgagtttgaattttggtccctggtaaaa 12933480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 32544820 - 32544773
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaa 163  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  32544820 ttttggtccctgcaaatatagcgaatttgggttttggtccttggtaaa 32544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 41693658 - 41693733
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||| ||||| ||||||| |||| ||||||||||||||||||||||| |   |||||||| | ||||||||||||    
T  41693658 ttttgatccctgcaaatatggcgaatttgggttttggtccctggtaaatttcttttttgaattccatccctgcaaa 41693733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 40576776 - 40576854
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    |||||||||||||| |||||||  ||| ||||| |||||||| ||||||||| | | ||||||||| ||||| ||||||    
T  40576776 tgcttttggtccctgcaaatatgacgaatttggattttggtctctggtaaaaaataattttgaaatccatccatgcaaa 40576854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 13418963 - 13419016
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaat 169  Q
    ||||||||||| ||||||| |||| ||||||| |||||||||||||||| ||||    
T  13418963 ttttggtccctgcaaatattgcgaatttgggtattggtccctggtaaaaaaaat 13419016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 32543490 - 32543539
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    |||||||||||||| |||||||||| ||||||||||||| ||| ||||||    
T  32543490 tgcttttggtccctacaaatatagcaagtttgggttttgatccttggtaa 32543539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 5610166 - 5610246
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatt-tttgaaattcatccctgcaaaa 192  Q
    |||||||| ||||| |||||||| ||| |||||||||| ||| ||||||||| |||   |||||||| |||||||||||||    
T  5610166 tgcttttgatccctgcaaatataacgaatttgggttttagtctctggtaaaaaaaaaaatttgaaatccatccctgcaaaa 5610246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 31489981 - 31489933
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||||| |||||||| ||||||||||||||||||| | ||||||    
T  31489981 ttttggtccctgcaaatataacgagtttgggttttggtccttagtaaaa 31489933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 31853561 - 31853635
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||||||||| ||||||| | |||||||| ||||||||||| |||||| |||   ||||||| ||||||||||||    
T  31853561 ttttggtccctgcaaatattgtgagtttggattttggtccctagtaaaa-aaaaaattgaaatccatccctgcaaa 31853635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 43066020 - 43066092
Alignment:
Q  122 tccctccaaatatagcgagtttgggttttggtccctggtaaaataaattt--ttgaaattcatccctgcaaaa 192  Q
    ||||| ||||||||||||||||| |||||||| | |||||||| |||     |||||||||||||||||||||    
T  43066020 tccctgcaaatatagcgagtttgagttttggttcttggtaaaaaaaaaaaaattgaaattcatccctgcaaaa 43066092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 36749281 - 36749217
Alignment:
Q  128 caaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||  |||||||| |||||||||||| ||||| |    |||||||||||||||||||||||    
T  36749281 caaatatgacgagtttgagttttggtccctagtaaatttttgttttgaaattcatccctgcaaaa 36749217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 39619840 - 39619800
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggt 153  Q
    |||||||||||| | ||||||| ||||||||||||||||||    
T  39619840 tgcttttggtccatgcaaatatggcgagtttgggttttggt 39619800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 29739 - 29818
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||| | ||||||||| |||||||||||||||||| |||  ||||||||||||||||||||||    
T  29739 tgcttttggtccctgcaaataaaacgagtttggattttggtccctggtaaaaaaaaaatttgaaattcatccctgcaaaa 29818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 30953 - 30884
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccct 186  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||   |||||||||||||||    
T  30953 ttttggtccctgcaaatatagtgagtttgggttttggtccctggtaaaa-aaaaaattgaaattcatccct 30884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 121034 - 120955
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||| |||  |||||| | |||||||||||||    
T  121034 tgcttttggtccctgcaaatataacgagtttgggttttggtccctggtaaaaaaaaaatttgaattccatccctgcaaaa 120955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 119603 - 119682
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||||||||| |||| |||||||||||||||||  |   |||||||| | |||||||||||||    
T  119603 tgcttttggtccctgcaaatatagcgaatttgagttttggtccctggtaatttttttttttgaattccatccctgcaaaa 119682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 1873 - 1949
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| ||||||||||||||||| |||||| ||||| |||||| ||| ||||||||||||||| |||||||    
T  1873 ttttggtccctgcaaatatagcgagtttgagttttgatccctagtaaaaaaaagttttgaaattcatccatgcaaaa 1949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 27571175 - 27571099
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||| |||   ||||||| |||||||||||||    
T  27571175 ttttggtccctgcaaatatagcgagtttgggttttgatccctggtaaaaaaaaaaattgaaatccatccctgcaaaa 27571099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 3936591 - 3936639
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3936591 ttttggtccctgcaaatatagcgagtttgggttttggtccctggtaaaa 3936639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 4565406 - 4565482
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||  |   |||||||||||||||| |||||||    
T  4565406 ttttagtccctacaaatatagcgagtttgggttttggtccctggtaatttttttttttgaaattcatccatgcaaaa 4565482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 6894056 - 6893980
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||| | |||||||  ||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||    
T  6894056 ttttggtccttgcaaatatgacgagtttaggttttggtccctggtaaaaaaaaaatttgaaattcatccctgcaaaa 6893980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 34911874 - 34911799
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||||||||||| ||||| ||||| |||||| |||   |||||||||||||||||||||    
T  34911874 ttttggtccctgcaaatatagcgagtttggattttgatccctagtaaaa-aaaaaattgaaattcatccctgcaaaa 34911799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 4777650 - 4777729
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||| |||| | |||||||||  ||||||| |||||||||||||||||| ||| |||||||||| |||||| |||||    
T  4777650 tgcttttagtccttgcaaatatagtaagtttggattttggtccctggtaaaaaaaaattttgaaattaatccctacaaaa 4777729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 15599775 - 15599854
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||  ||||  |   ||||||||||||||||||||||||    
T  15599775 tgcttttggtccctacaaatatggcgaatttgggttttggtccccagtaatttttttttttgaaattcatccctgcaaaa 15599854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 25254180 - 25254101
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| ||||||||  ||||||| |||||| ||||||||||  |   ||||||||||||||||||||||||    
T  25254180 tgcttttggtccctgcaaatatatagagtttgagttttgatccctggtaatttttttttttgaaattcatccctgcaaaa 25254101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 25317970 - 25317891
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| ||||||||  ||||||| |||||| ||||||||||  |   ||||||||||||||||||||||||    
T  25317970 tgcttttggtccctgcaaatatatagagtttgagttttgatccctggtaatttttttttttgaaattcatccctgcaaaa 25317891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 15604092 - 15604029
Alignment:
Q  128 caaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||| |||||||||||||||||||||| |||||| |||   |||||||||||||||||||||    
T  15604092 caaatatggcgagtttgggttttggtccctagtaaaa-aaaaaattgaaattcatccctgcaaaa 15604029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 3938109 - 3938058
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||| |||||| |||||||||| ||||| ||||||||||||||||||||    
T  3938109 tgcttttagtccctgcaaatatagcaagtttaggttttggtccctggtaaaa 3938058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 14809176 - 14809252
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggta-aaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||| ||||| |||||||||||| ||||| ||||||||||| ||| ||||||| ||||||||| ||||| |||||||    
T  14809176 ttttgatccctacaaatatagcgaatttggattttggtccctagtagaaataaa-ttttgaaatccatccttgcaaaa 14809252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 3954065 - 3954113
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||| | |||||||| ||| ||||||||||||||||||||||||    
T  3954065 ttttggtccttgcaaatatatcgaatttgggttttggtccctggtaaaa 3954113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 4778874 - 4778810
Alignment:
Q  128 caaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||| ||||||||||| |||| |||||  |   ||||||||||||||||||||||||    
T  4778874 caaatatagcgattttgggttttgatccccggtaatttttttttttgaaattcatccctgcaaaa 4778810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 27570069 - 27570145
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||| | |||||||||||||||||||||||| |||| |  |||| |||   ||||||| |||||||||||||    
T  27570069 ttttggtccttgcaaatatagcgagtttgggttttgttcccggtaaaaaaaaaaaattgaaatccatccctgcaaaa 27570145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 3205151 - 3205100
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||||||| ||||| |||||||   |||||||||||||||||||||||||||    
T  3205151 tgcttttgatccctgcaaatatgatgagtttgggttttggtccctggtaaaa 3205100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 31540509 - 31540555
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    ||||||||||| |||||||| ||| ||||||||||||| ||||||||    
T  31540509 ttttggtccctgcaaatataacgaatttgggttttggtacctggtaa 31540555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 42359392 - 42359316
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||| ||| ||||||||  | |||||||||||    
T  42359392 ttttggtccctgcaaatatagcgagtttggattttggtccctggtaaaaaaaacttttgaaaaacgtccctgcaaaa 42359316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 45618295 - 45618346
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  45618295 tgcttttggtccctgcaaatatagcgagtttgggttttggtccctggtaaaa 45618346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 19675669 - 19675592
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||||| ||||||||| |||||||||||| ||||| |||  |||||||||||||||| |||||    
T  19675669 tgcttttggtccctgcaaatataacgagtttggattttggtccctgataaaaaaaa--tttgaaattcatccctacaaaa 19675592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 32699360 - 32699284
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||  |||||||||||||||||||||||||||||  ||||| |||  |||||||||| |||||||||||    
T  32699360 ttttggtccctgtaaatatagcgagtttgggttttggtccctcataaaaaaaaaatttgaaattcgtccctgcaaaa 32699284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 42358045 - 42358121
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||  |||||| |||||| |||||||||||| ||| ||||||||| |||||||||||||    
T  42358045 ttttggtccctgcaaatataggaagtttgagttttgatccctggtaaaaaaaacttttgaaatccatccctgcaaaa 42358121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 19674424 - 19674502
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||| | ||||||||||||||||| ||||||||||||||| || |   ||||||||||||||||||||||||    
T  19674424 tgcttttggtccttgcaaatatagcgagtttgagttttggtccctggt-aattttttttttgaaattcatccctgcaaaa 19674502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 22204068 - 22204116
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  22204068 ttttggtccctgcaaatatagcgagtttgggttttagtccctggtaaaa 22204116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 33137274 - 33137198
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||||||    |||||||||| ||||| |||||||    
T  33137274 ttttgatccctgcaaatatagcgagtttgggttttagtccctggtaaaaattttttttgaaatccatccttgcaaaa 33137198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 3879096 - 3879146
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaa 163  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  3879096 tgcttttgatccctgcaaatatagcgagtttggattttggtccctggtaaa 3879146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 3880542 - 3880494
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||||    
T  3880542 ttttggttcctgcaaatatagcgagtttgggttttggtccctagtaaaa 3880494  T

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Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 40198593 - 40198633
Alignment:
Q  122 tccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  40198593 tccctgcaaatatagcgagtttgggttttggtccctggtaa 40198633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 17281581 - 17281632
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||| |||||| |||||||||||| ||||| ||||||||||||||||||    
T  17281581 tgcttttagtccctgcaaatatagcgaatttggattttggtccctggtaaaa 17281632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 17326780 - 17326705
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||||||||||||||||||| |  ||||||||||||||||| ||||||    ||||||||||  |||||||||||    
T  17326780 ttttggtccctccaaatatagggcatttgggttttggtccctagtaaaaattttttttgaaatcaatccctgcaaa 17326705  T

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Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 17370083 - 17370134
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||| |||||| |||||||||||| ||||| ||||||||||||||||||    
T  17370083 tgcttttagtccctgcaaatatagcgaatttggattttggtccctggtaaaa 17370134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 55542625 - 55542550
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||| ||||| ||||||||||  ||||||| ||||||||||||||||| |||  |||||| ||||||| ||||||    
T  55542625 ttttgatccctgcaaatatagcatgtttgggatttggtccctggtaaaaaaaaaatttgaatttcatccttgcaaa 55542550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 17371894 - 17371845
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    |||||||| ||||| |||||||| ||| ||||||||||||||||||||||    
T  17371894 tgcttttgatccctgcaaatataacgaatttgggttttggtccctggtaa 17371845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 41933831 - 41933879
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||||||| || |||||||||||||||||||||||||||| | ||||||    
T  41933831 ttttggtctctgcaaatatagcgagtttgggttttggtccttagtaaaa 41933879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 45619777 - 45619729
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||| |||||| |||||||||||||||| ||||||| ||||||||||||    
T  45619777 ttttagtccctgcaaatatagcgagtttaggttttgttccctggtaaaa 45619729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 54121746 - 54121698
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  54121746 ttttgctccctgcaaatacggcgagtttgggttttggtccctggtaaaa 54121698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 41935116 - 41935078
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtc 154  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  41935116 ttttggtccctgcaaatataacgagtttgggttttggtc 41935078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 34659716 - 34659761
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctg 158  Q
    |||||||||||||| ||||||| |||||||  ||||||||||||||    
T  34659716 tgcttttggtccctgcaaatatggcgagttaaggttttggtccctg 34659761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 16573388 - 16573436
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggta 161  Q
    ||||||||||| || ||||||| |||| |||||||||||||| ||||||    
T  16573388 tgcttttggtctctacaaatatggcgaatttgggttttggtctctggta 16573436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 29059726 - 29059802
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||| |||||| |||||||| ||| |||| |||  |||||||||||||| |||  |||||| ||||||| |||||||    
T  29059726 ttttcgtccctgcaaatataacgaatttgagttccggtccctggtaaaaaaaaaatttgaatttcatccttgcaaaa 29059802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 24609932 - 24610008
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| ||||||| |||||||||||||||||||||| |||||  || |||||||| |||||||||||||||    
T  24609932 ttttggtccctgcaaatatggcgagtttgggttttggtccctagtaaataaattttttgaatttcatccctgcaaaa 24610008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 24611163 - 24611087
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||  ||||||  |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  24611163 ttttggtccctgtaaatatgacgagtttgagttttggtccctggtaaaataaaattttgaatttcatccctgcaaaa 24611087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 27816766 - 27816690
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||| | |||||||||||||||||||||||| ||| |||||||||  ||||||||||||    
T  27816766 ttttggtccctgcaaatatagccaatttgggttttggtccctggtaaaaaaaaattttgaaatcaatccctgcaaaa 27816690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 47038879 - 47038955
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||| |||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||| | |||||||||||||    
T  47038879 ttttagtccctgcaaatatagctagtttgggttttggtccctggtaaaaaaaaattttgaattccatccctgcaaaa 47038955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 9774937 - 9774886
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9774937 tgcttttggtccctgcaaatatagcgagtttgggttttggtccctggtaaaa 9774886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 27264262 - 27264187
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||  ||||||||  |||| ||||||    
T  27264262 ttttggtccctgcaaatatagcgagtttgggttttggtccctggtaaaaaaaaaatttgaaatcaatccttgcaaa 27264187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 46075096 - 46075021
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||| |||   |||||||| |||||||||||    
T  46075096 ttttgatccctgcaaatatagcgagtttgggttttggtccctggtaaaaaaaaaaattgaaattaatccctgcaaa 46075021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 27815457 - 27815530
Alignment:
Q  119 tggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||| |||||||||| | |||||||||||||||||||||||| ||| |||||||||  ||||||||||||    
T  27815457 tggtccctgcaaatatagccaatttgggttttggtccctggtaaaaaaaaattttgaaatcaatccctgcaaaa 27815530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 9774050 - 9774126
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||||  |   ||||||||||||||||||||||||    
T  9774050 ttttggtccctgcaaatataacgagtttgagttttggtccctggtaatttttttttttgaaattcatccctgcaaaa 9774126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 17977605 - 17977529
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||||||| |||  ||||||||  ||||||||||||    
T  17977605 ttttggtccctgcaaatatagcgaatttgggttttggtccttggtaaaaaaaaaatttgaaatcaatccctgcaaaa 17977529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 20723734 - 20723658
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||||| |||| ||||| |||||||||||||  || ||||||||| |||||||||||||    
T  20723734 ttttggtccctgcaaatatagcgaatttgagttttagtccctggtaaaaataaattttgaaatccatccctgcaaaa 20723658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 26863873 - 26863949
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||| |   ||||||||| ||||||||||||||    
T  26863873 ttttggtccctgcaaatatagcgaatttgagttttggtccctggtaaattttttttttgaaaatcatccctgcaaaa 26863949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 20722482 - 20722533
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  20722482 tgcttttggtccctgcaaatatagcgaatttgggttttggtccctggtaaaa 20722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 37396889 - 37396810
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||||||||| |||| |||||||||| |||||||| || |||||||||  | |||||||||||    
T  37396889 tgcttttggtccctgcaaatatagcgaatttgagttttggtccttggtaaaaaaattttttgaaaaacgtccctgcaaaa 37396810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 27262921 - 27262983
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaat 178  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||  ||||||||    
T  27262921 ttttggtccctgcaaatatagcgagtttgtgttttggtccctggtaaaaaaaaaatttgaaat 27262983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 26865230 - 26865154
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||| || |||||||||||| ||||| |||| |||||||||||||  || ||||||||| |||||||||||||    
T  26865230 ttttggtctctgcaaatatagcgaatttggattttagtccctggtaaaaataaattttgaaatccatccctgcaaaa 26865154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 35911937 - 35911858
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||||||||| ||||| ||||||||| |||||||| |||  |||||||  | |||||||||||    
T  35911937 tgcttttggtccctgcaaatatagcgaatttggattttggtccttggtaaaaaaaaaatttgaaaaacgtccctgcaaaa 35911858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 39163073 - 39163022
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||||||||    
T  39163073 tgcttttggtccctgcaaatatggcgaggttgggttttggtccctggtaaaa 39163022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 35721114 - 35721168
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatt 170  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||||| |||||    
T  35721114 ttttggtccctgcaaatataacgaatttgggttttggtccctggtaaaaaaaatt 35721168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 46073895 - 46073972
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    |||||||| ||||| |||||||||| | |||||||||| ||||||||| ||||   |||||||||||||||||||||||    
T  46073895 tgcttttgatccctgcaaatatagcaaatttgggttttagtccctggt-aaatttttttttgaaattcatccctgcaaa 46073972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 11711299 - 11711232
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctg 187  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||||||| |||   ||||||||||||||||    
T  11711299 ttttggtccctgcaaatatagcgaatttggg-tttggtccctggtaaaaaaaa---ttgaaattcatccctg 11711232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 11710566 - 11710642
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||| |||||  ||||||| |||| ||||||||||||||||||||||| ||| ||||||||| |  ||||||||||    
T  11710566 ttttgatccctgtaaatataacgaggttgggttttggtccctggtaaaaaaaacttttgaaatacgcccctgcaaaa 11710642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 17976774 - 17976822
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  17976774 ttttggttcctgcaaatatagcgaatttgggttttggtccctggtaaaa 17976822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 23470015 - 23469939
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||||||||| ||||||| ||||||||||| |   ||||| |||| ||||| |||||||    
T  23470015 ttttggtccctgcaaatatagcgagtttcggttttgatccctggtaaatttttttttttaaatccatccttgcaaaa 23469939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 24427415 - 24427367
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  24427415 ttttggtccctacaaatatagcgagtttgagttttagtccctggtaaaa 24427367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 34934796 - 34934744
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaat 165  Q
    ||||||| |||||| |||||||||||| ||||||||||||||| |||||||||    
T  34934796 tgctttttgtccctgcaaatatagcgaatttgggttttggtccttggtaaaat 34934744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 37395646 - 37395722
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||| |   |||||||||  | |||||||||||    
T  37395646 ttttggtccctgcaaatatagcgtatttgggttttggtccctggtaaattttttttttgaaaaacgtccctgcaaaa 37395722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 50164413 - 50164461
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggta 161  Q
    |||||||||||||| ||||||| ||||||||| |||||||||| |||||    
T  50164413 tgcttttggtccctgcaaatatggcgagtttgagttttggtccttggta 50164461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 30722126 - 30722205
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||  ||||| | |||||||| ||||||| ||||||||| |||||||| |||  |||||| | |||||||||||||    
T  30722126 tgcttttaatccctgcgaatatagcaagtttggattttggtccttggtaaaaaaaaaatttgaattccatccctgcaaaa 30722205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 50164578 - 50164535
Alignment:
Q  147 ttttggtccctggtaaaataaatttttgaaattcatccctgcaa 190  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||    
T  50164578 ttttggtccctggtaaaaaaaaattttgaatttcatccctgcaa 50164535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 13074620 - 13074546
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||| ||| |||||||  |||||||| ||||||||||||||||||| |||   ||||||| ||||||| |||||    
T  13074620 ttttggttcctgcaaatatgacgagtttgagttttggtccctggtaaaaaaaa--attgaaatccatccctacaaaa 13074546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 35722331 - 35722270
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaa 177  Q
    |||||||||||  ||||||||||| ||||| |||||||| ||||||||| |||  |||||||    
T  35722331 ttttggtccctgtaaatatagcgaatttggattttggtctctggtaaaaaaaaaatttgaaa 35722270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 48334181 - 48334136
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctg 158  Q
    |||||||||||||| |||||||||||| |||| |||||||| ||||    
T  48334181 tgcttttggtccctacaaatatagcgaatttgagttttggttcctg 48334136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 34998190 - 34998110
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggt-aaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||| |||| |||  |||||||| ||||| |||||||    
T  34998190 tgcttttgatccctgcaaatatagcgagtttgggttttggtccctggtaaaaaaaaaaatttgaaatccatccttgcaaaa 34998110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 17517355 - 17517280
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||||||||| |||   ||||| ||||||||||||||    
T  17517355 ttttggtccctgcaaatatggcgagtttgagttttggtccctggtaaaaaaaaaaattgaatttcatccctgcaaa 17517280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 21953216 - 21953295
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||||||||| ||||| |||||||||||||||||| |||  |||||||  | |||||||||||    
T  21953216 tgcttttggtccctgcaaatatagcgaatttggattttggtccctggtaaaaaaaaaatttgaaaaacgtccctgcaaaa 21953295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 20897543 - 20897469
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||||| |||   ||||||| |||||||||||||    
T  20897543 ttttggtccctgcaaatatagtgaatttgggttttggtccctggtaaaaaaaa--attgaaatccatccctgcaaaa 20897469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 21165256 - 21165305
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  21165256 tgcttttggtccctgcaaatatagcgagtttgtgttttggtccctggtaa 21165305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 18810545 - 18810593
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  18810545 ttttggtccctgcaaatatagtgagtttgggttttggtccctggtaaaa 18810593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 34995124 - 34995203
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||| ||||| |||||||||||| |||| |||||||| |||||||||| |||   ||||||| |||||||||||||    
T  34995124 tgcttttgatccctgcaaatatagcgaatttgagttttggttcctggtaaaaaaaaaaattgaaatccatccctgcaaaa 34995203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 20393317 - 20393239
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaat-ttttgaaattcatccctgcaa 190  Q
    |||||||| ||||| |||||||||||| |||||||||  ||||||||||||| |||| ||||||||| | |||||||||    
T  20393317 tgcttttgatccctgcaaatatagcgaatttgggtttcagtccctggtaaaaaaaatattttgaaatccgtccctgcaa 20393239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 3279545 - 3279470
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||| ||||| |||||||||||||||||  ||||||| |||||||||| |||   |||||||||||||||||||||    
T  3279545 ttttgatccctgcaaatatagcgagtttgaattttggttcctggtaaaa-aaaaaattgaaattcatccctgcaaaa 3279470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 17516175 - 17516250
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||||||||| ||||||| | ||||||||||||||||||||| |||| |   |||||||| |||||| |||||||    
T  17516175 ttttggtccctgcaaatatggtgagtttgggttttggtccctgataaattttttttttgaatttcatctctgcaaa 17516250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 25440719 - 25440645
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||||||| | ||||||| |||||||||  |||||||||||||||||| ||| | ||||||| ||||||||||||    
T  25440719 ttttggtccttacaaatatggcgagtttgaattttggtccctggtaaaa-aaaatattgaaatccatccctgcaaa 25440645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 26419526 - 26419572
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||||    
T  26419526 ttttggtccctacaaatataacaagtttgggttttggtccctggtaa 26419572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 30253585 - 30253515
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccct 186  Q
    ||||||||||| |||||| ||||||| || ||||||||| || |||||| || || |||||||||||||||    
T  30253585 ttttggtccctgcaaatacagcgagtatgagttttggtctcttgtaaaaaaatttattgaaattcatccct 30253515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 3276380 - 3276454
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||||| ||||| |||| |||||| |||||| |||   || ||||||||||||||||||    
T  3276380 ttttggtccctgcaaatatagcgaatttggattttagtccctagtaaaaaaaa--attaaaattcatccctgcaaaa 3276454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 20391224 - 20391273
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    |||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  20391224 tgcttttggtccctgcaaatatagtgaatttgggttttggtccctcgtaa 20391273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 29291369 - 29291414
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctg 158  Q
    |||||||||||| | ||||||| |||||||||||||||||||||||    
T  29291369 tgcttttggtccttgcaaatatggcgagtttgggttttggtccctg 29291414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 1171697 - 1171622
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||| ||||| |||||||| ||||||||| |||||||||||| | ||||   |||||||||| |||||||||||||    
T  1171697 ttttgatccctgcaaatataacgagtttggtttttggtccctgat-aaatttttttttgaaatccatccctgcaaaa 1171622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 16995464 - 16995512
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||||| ||||||||  || ||||||||||||||||||||||||    
T  16995464 ttttggtccctgcaaatataaagaatttgggttttggtccctggtaaaa 16995512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 17000324 - 17000281
Alignment:
Q  115 cttttggtccctccaaatatagcgagtttgggttttggtccctg 158  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||    
T  17000324 cttttggtccctgcaaatgtagtgagtttgggttttggtccctg 17000281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 1972413 - 1972466
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaat 169  Q
    ||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  1972413 ttttggtccctgcaaataaagcgaatttgggttttagtctctggtaaaaaaaat 1972466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 25977883 - 25977959
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| ||   ||||||||||  ||||||||||||    
T  25977883 ttttggtccctgcaaatatagtgagtttgggttttggtccctggtaatatttttttttgaaatcgatccctgcaaaa 25977959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 1777482 - 1777557
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||  ||||||||  |||| ||||||    
T  1777482 ttttggtccctgcaaatatagcgagtttgagttttggtccctggtaaaaaaaaaatttgaaatcaatccttgcaaa 1777557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 2412474 - 2412416
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttg 174  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  2412474 ttttggtccctgcaaatatagcgagtttgggttttagtccctggtaaaaaaaaattttg 2412416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 36837824 - 36837750
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||| |||    |||||| |||||||||||||    
T  36837824 ttttggtctctgcaaatatagcgagtttgggttttggtccctggtaaaaaaaa--aatgaaatccatccctgcaaaa 36837750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 25979297 - 25979249
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  25979297 ttttggtccctgcaaatatagcgaatttgggttttggtccctggtaaaa 25979249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 23861765 - 23861838
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaa 190  Q
    ||||||||||| ||||||| | |||||||| |||||||||||||||||| |||  |||||||| |||||||||||    
T  23861765 ttttggtccctgcaaatatggagagtttggattttggtccctggtaaaa-aaaaatttgaaatccatccctgcaa 23861838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 1778839 - 1778788
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||||||||| ||| |||||||||||| ||||||||||||||| ||||||||    
T  1778839 tgcttttggttcctgcaaatatagcgactttgggttttggtccttggtaaaa 1778788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 19603751 - 19603825
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||||||||| |||||||| |   ||||||||||||||| ||||||||| | |||||||||| ||||||||||||    
T  19603751 ttttggtccctgcaaatataactcatttgggttttggtcc-tggtaaaattattttttgaaatccatccctgcaaa 19603825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 36836497 - 36836555
Alignment:
Q  131 atatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||||||||||||  |||||||||||| |||   |||||||||||||||||||||    
T  36836497 atatagcgagtttgggttttaatccctggtaaaaaaaa---ttgaaattcatccctgcaaaa 36836555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 12067041 - 12067107
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcat 182  Q
    ||||||||||| ||||||||| || |||| ||||||||| |||||||||||||  |||||| |||||    
T  12067041 ttttggtccctacaaatatagggaatttgagttttggtcactggtaaaataaaaatttgaatttcat 12067107  T

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Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 23863096 - 23863020
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||| || ||||||| |||||||||||||||| ||||| |||||| |||   ||||||| ||||| |||||||    
T  23863096 ttttggtctctgcaaatatggcgagtttgggttttgatccctagtaaaaaaaaaaattgaaatccatccttgcaaaa 23863020  T

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Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 4038855 - 4038930
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||| |||||  ||||||||  ||||||| ||||||| |||||||||| |  |||||||||| ||||||||||||    
T  4038855 ttttgatccctgtaaatatagtaagtttggattttggtacctggtaaaaaatttttttgaaatccatccctgcaaa 4038930  T

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Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 21573946 - 21574025
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||||  | ||||||  ||||||||| |||||||| ||  ||||||||| | |||||||||||    
T  21573946 tgcttttggtccctgcaaatatgacaagtttgatttttggtccttggtaaaaaaatattttgaaatccgtccctgcaaaa 21574025  T

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Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 30843669 - 30843704
Alignment:
Q  128 caaatatagcgagtttgggttttggtccctggtaaa 163  Q
    |||||||| |||||||||||||||||||||||||||    
T  30843669 caaatataacgagtttgggttttggtccctggtaaa 30843704  T

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Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 30844594 - 30844521
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||| | |||||||| |||||| |||||| |||| ||||||||| ||| |   |||||||||||||||||||    
T  30844594 ttttggtccttgcaaatataacgagttcgggtttcggtctctggtaaaaaaaaat---gaaattcatccctgcaaaa 30844521  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 11087068 - 11087109
Alignment:
Q  122 tccctccaaatatagcgagtttgggttttggtccctggtaaa 163  Q
    ||||| |||||||||||||||||| ||||||||| |||||||    
T  11087068 tccctgcaaatatagcgagtttggcttttggtccttggtaaa 11087109  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 11088714 - 11088650
Alignment:
Q  128 caaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||| |||| |||||||| ||||||||| |   ||||| || |||||||||||||||    
T  11088714 caaatatagcgaatttgagttttggttcctggtaaatttttttttttaatttcatccctgcaaaa 11088650  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 20245339 - 20245303
Alignment:
Q  128 caaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    |||||||||||| |||||||||| |||||||||||||    
T  20245339 caaatatagcgaatttgggttttagtccctggtaaaa 20245303  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 29794363 - 29794315
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||||| |||||||||||| |||| |||||||| |||| |||||    
T  29794363 ttttggtccctgcaaatatagcgaatttgagttttggttcctgataaaa 29794315  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 43824176 - 43824252
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||| |||||| |||||||||| | |||| |||||||||||| |||||| |||   ||||| || ||||||||||||    
T  43824176 ttttcgtccctgcaaatatagcaaatttgagttttggtccctagtaaaaaaaaaaattgaatttaatccctgcaaaa 43824252  T

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Target: scaffold0517 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 10325 - 10404
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||||||||| |||| |||||||||| |||||||| || |||||||||  | |||||||||||    
T  10325 tgcttttggtccctgcaaatatagcgaatttgagttttggtccttggtaaaaaaattttttgaaaaacgtccctgcaaaa 10404  T

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Target: scaffold0517; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 11568 - 11492
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||| |   |||||||||  | |||||||||||    
T  11568 ttttggtccctgcaaatatagcgtatttgggttttggtccctggtaaattttttttttgaaaaacgtccctgcaaaa 11492  T

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Target: scaffold0009 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 202589 - 202668
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||||| ||||||||| |||||||||| |||||| |   ||||| ||||||||||||||||||    
T  202589 tgcttttggtccctgcaaatataacgagtttggattttggtcccgggtaaattttttttttaaaattcatccctgcaaaa 202668  T

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Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 344950 - 345023
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggt-aaaataaatttttgaaattcatccctgc 188  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| |||| |||  |||||||| |||||||||    
T  344950 ttttggtccctgcaaatatggcgagtttgggttttggtccctggtaaaaaaaaaaatttgaaatccatccctgc 345023  T

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Target: scaffold0002; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 374348 - 374423
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    ||||| ||||| |||||||||||||||||||||||||||||| ||||  |   |||||||||| ||||||||||||    
T  374348 ttttgatccctgcaaatatagcgagtttgggttttggtcccttgtaatttttttttttgaaatccatccctgcaaa 374423  T

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Target: scaffold0002; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 376418 - 376339
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||||||||| |||||||||||||||||||||||  |||||  ||||| |||   ||||||||||| |||||||||    
T  376418 tgcttttggtccctgcaaatatagcgagtttgggttttattccctcataaaaaaaaaaattgaaattcatgcctgcaaaa 376339  T

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Target: scaffold0002; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 345943 - 345897
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  345943 ttttggtccctgcaaatatagcgaatttgggttttggtccctagtaa 345897  T

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Target: scaffold0230 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 477 - 429
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaa 164  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  477 ttttggtccctgcaaatatagtgagtttgggttttggtccctggtaaaa 429  T

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Target: scaffold0562 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 9932 - 9982
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaa 163  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  9932 tgcttttgatccctgcaaatatagcgagtttggattttggtccctggtaaa 9982  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 72580 - 72523
Alignment:
Q  128 caaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccc 185  Q
    |||||||||||||||||| ||||| ||  |||||||||||| ||||||||||||||||    
T  72580 caaatatagcgagtttggtttttgatctatggtaaaataaaattttgaaattcatccc 72523  T

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Target: scaffold0095 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 42804 - 42728
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaa 191  Q
    |||||||||||| | ||||||| ||||||||| ||||||||||||| ||||| |||   ||||| ||||||||||||||    
T  42804 tgcttttggtccttgcaaatatggcgagtttgagttttggtccctgataaaaaaaa--attgaatttcatccctgcaaa 42728  T

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Target: scaffold0599 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 6633 - 6584
Alignment:
Q  113 tgcttttggtccctccaaatatagcgagtttgggttttggtccctggtaa 162  Q
    ||||||| |||||| |||||||||||| ||||||||||||| ||||||||    
T  6633 tgcttttagtccctgcaaatatagcgaatttgggttttggtgcctggtaa 6584  T

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Target: scaffold0516 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 1181 - 1105
Alignment:
Q  116 ttttggtccctccaaatatagcgagtttgggttttggtccctggtaaaataaatttttgaaattcatccctgcaaaa 192  Q
    |||||||| || ||||||| ||||||||| |||||||||||| ||||| |   |||||||||| ||||| |||||||    
T  1181 ttttggtctctgcaaatatggcgagtttgagttttggtccctcgtaaattttttttttgaaatccatccttgcaaaa 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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