View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5680_high_22 (Length: 247)
Name: NF5680_high_22
Description: NF5680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5680_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 13 - 216
Target Start/End: Original strand, 32942178 - 32942378
Alignment:
| Q |
13 |
gagaacagttgttttctatcattgtacttatttgagtgcaatttatatgaacatacaaatatttgtttataacagtgacgtgagctagagagagagatca |
112 |
Q |
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| T |
32942178 |
gagaacagttgttttctatcattgtacttatttgagtgcaatttatatgaacataaaaatatttgtttataacagtgacgtgagctagagagata---ca |
32942274 |
T |
|
| Q |
113 |
tgttataattaatgttactactattttaaaaacctaagaaataaatcctccagcaatgaagaaattaataaagtgatgggtacaaaaataataagtcgtg |
212 |
Q |
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|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32942275 |
tgttatcattaatgttagtactattttaaaaacctaagaaataaatcctccagcaatgaagaaattaataaagtgatgggtacaaaaataataagtcgtg |
32942374 |
T |
|
| Q |
213 |
tttg |
216 |
Q |
| |
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|||| |
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| T |
32942375 |
tttg |
32942378 |
T |
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