View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5680_low_22 (Length: 250)

Name: NF5680_low_22
Description: NF5680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5680_low_22
NF5680_low_22
[»] chr3 (75 HSPs)
chr3 (1-129)||(51255079-51255207)
chr3 (1-129)||(46819940-46820070)
chr3 (1-129)||(21654135-21654266)
chr3 (1-129)||(1335001-1335131)
chr3 (1-120)||(16739263-16739384)
chr3 (4-129)||(45781290-45781418)
chr3 (1-129)||(13541168-13541298)
chr3 (1-129)||(23513458-23513588)
chr3 (1-129)||(26641211-26641341)
chr3 (1-129)||(55400629-55400759)
chr3 (1-129)||(43575849-43575978)
chr3 (4-129)||(31126106-31126233)
chr3 (4-129)||(46580430-46580557)
chr3 (1-129)||(53020073-53020204)
chr3 (1-129)||(32322338-32322468)
chr3 (5-124)||(51426512-51426635)
chr3 (4-129)||(28793055-28793183)
chr3 (1-109)||(34022512-34022622)
chr3 (4-129)||(37324183-37324314)
chr3 (1-129)||(36189105-36189235)
chr3 (41-129)||(46296176-46296266)
chr3 (4-129)||(52172109-52172235)
chr3 (1-70)||(45347828-45347897)
chr3 (75-127)||(52252003-52252055)
chr3 (9-124)||(22456109-22456227)
chr3 (1-108)||(2927166-2927276)
chr3 (1-68)||(33974738-33974805)
chr3 (9-124)||(22479155-22479273)
chr3 (1-124)||(38401271-38401397)
chr3 (3-129)||(23209376-23209505)
chr3 (76-129)||(49068019-49068072)
chr3 (7-78)||(14752377-14752448)
chr3 (1-124)||(10251902-10252028)
chr3 (190-235)||(32322232-32322277)
chr3 (190-235)||(51309495-51309540)
chr3 (190-239)||(52252118-52252167)
chr3 (190-234)||(26641106-26641150)
chr3 (4-76)||(49067007-49067079)
chr3 (4-124)||(21214135-21214258)
chr3 (26-124)||(2994519-2994620)
chr3 (190-235)||(21654327-21654372)
chr3 (190-235)||(45347706-45347751)
chr3 (190-235)||(55400820-55400865)
chr3 (190-230)||(1335192-1335232)
chr3 (191-235)||(16739153-16739197)
chr3 (14-70)||(46557379-46557435)
chr3 (24-121)||(49583879-49583979)
chr3 (190-229)||(46296076-46296115)
chr3 (1-124)||(10114803-10114928)
chr3 (29-124)||(34194807-34194905)
chr3 (194-240)||(51255272-51255318)
chr3 (190-235)||(28793244-28793289)
chr3 (190-235)||(31126294-31126339)
chr3 (190-235)||(34022681-34022726)
chr3 (7-68)||(36546457-36546518)
chr3 (7-68)||(36561797-36561858)
chr3 (190-235)||(43576039-43576084)
chr3 (190-235)||(45781479-45781524)
chr3 (26-70)||(11054454-11054498)
chr3 (9-77)||(34105443-34105510)
chr3 (190-234)||(53020265-53020309)
chr3 (7-70)||(579326-579389)
chr3 (7-78)||(28875290-28875361)
chr3 (24-70)||(7866660-7866706)
chr3 (202-239)||(26724977-26725014)
chr3 (25-70)||(37074860-37074905)
chr3 (190-239)||(37075049-37075098)
chr3 (190-235)||(46580618-46580662)
chr3 (25-70)||(46711836-46711881)
chr3 (9-77)||(51309323-51309391)
chr3 (5-70)||(51311554-51311618)
chr3 (190-235)||(51426701-51426746)
chr3 (26-70)||(23311739-23311783)
chr3 (5-57)||(26207716-26207768)
chr3 (190-234)||(49068133-49068177)
[»] chr2 (68 HSPs)
chr2 (1-129)||(21539647-21539777)
chr2 (1-129)||(38549779-38549909)
chr2 (3-129)||(33635228-33635356)
chr2 (1-129)||(792492-792622)
chr2 (1-129)||(15858746-15858876)
chr2 (4-129)||(8784288-8784415)
chr2 (4-129)||(29514155-29514282)
chr2 (1-129)||(28492410-28492540)
chr2 (1-121)||(29514619-29514740)
chr2 (1-124)||(28424165-28424289)
chr2 (3-129)||(4033811-4033939)
chr2 (1-129)||(4091900-4092031)
chr2 (4-129)||(43075643-43075770)
chr2 (4-129)||(5091676-5091805)
chr2 (1-116)||(10979082-10979198)
chr2 (3-129)||(35832304-35832432)
chr2 (4-129)||(10478068-10478198)
chr2 (4-129)||(43451409-43451525)
chr2 (30-129)||(14565509-14565611)
chr2 (35-129)||(44803823-44803918)
chr2 (41-129)||(22162249-22162340)
chr2 (6-70)||(29524258-29524322)
chr2 (7-78)||(19263979-19264050)
chr2 (1-77)||(13822949-13823027)
chr2 (190-235)||(792386-792431)
chr2 (190-235)||(4092092-4092137)
chr2 (190-235)||(14565403-14565448)
chr2 (4-129)||(15068639-15068755)
chr2 (190-235)||(21539838-21539883)
chr2 (9-129)||(18834046-18834170)
chr2 (24-121)||(38070912-38071012)
chr2 (24-108)||(25571941-25572029)
chr2 (4-124)||(26998214-26998336)
chr2 (1-108)||(8701475-8701585)
chr2 (1-124)||(32009995-32010121)
chr2 (190-235)||(10979250-10979295)
chr2 (26-124)||(20380041-20380142)
chr2 (190-235)||(35832493-35832538)
chr2 (44-117)||(38071586-38071666)
chr2 (190-235)||(38549673-38549718)
chr2 (190-235)||(44803979-44804024)
chr2 (190-234)||(10478259-10478303)
chr2 (6-108)||(18454944-18455048)
chr2 (194-234)||(28492605-28492645)
chr2 (7-70)||(6110387-6110450)
chr2 (7-70)||(33198852-33198915)
chr2 (24-124)||(44442049-44442150)
chr2 (190-235)||(4033705-4033750)
chr2 (190-235)||(8784476-8784521)
chr2 (1-70)||(11031121-11031188)
chr2 (190-235)||(15068816-15068861)
chr2 (190-235)||(18833940-18833985)
chr2 (190-227)||(28424352-28424389)
chr2 (190-235)||(43451586-43451631)
chr2 (24-121)||(32273587-32273687)
chr2 (7-70)||(5280698-5280761)
chr2 (7-70)||(28858189-28858252)
chr2 (24-70)||(45660259-45660305)
chr2 (76-129)||(9294622-9294675)
chr2 (190-235)||(13822800-13822845)
chr2 (190-235)||(29514049-29514094)
chr2 (190-235)||(29514505-29514550)
chr2 (84-129)||(33933055-33933100)
chr2 (202-239)||(38071476-38071513)
chr2 (9-77)||(12872034-12872101)
chr2 (26-70)||(28599335-28599379)
chr2 (190-234)||(33635417-33635461)
chr2 (26-70)||(41528186-41528230)
[»] chr4 (70 HSPs)
chr4 (3-129)||(50768334-50768462)
chr4 (1-128)||(55937807-55937936)
chr4 (1-129)||(52712950-52713080)
chr4 (4-129)||(37788341-37788468)
chr4 (1-129)||(29899602-29899732)
chr4 (1-129)||(32012430-32012560)
chr4 (1-129)||(38940756-38940886)
chr4 (3-129)||(53677582-53677710)
chr4 (1-129)||(29180515-29180645)
chr4 (1-129)||(30776587-30776717)
chr4 (1-129)||(30777374-30777504)
chr4 (1-129)||(38187829-38187959)
chr4 (1-129)||(27750451-27750581)
chr4 (1-129)||(39970092-39970222)
chr4 (1-129)||(1619916-1620046)
chr4 (1-129)||(3043270-3043400)
chr4 (1-129)||(10591606-10591735)
chr4 (1-129)||(43980386-43980515)
chr4 (1-124)||(9798183-9798308)
chr4 (5-129)||(49901917-49902044)
chr4 (41-129)||(51495079-51495166)
chr4 (3-129)||(5222396-5222529)
chr4 (1-124)||(23978250-23978376)
chr4 (9-129)||(30012055-30012178)
chr4 (190-235)||(29180409-29180454)
chr4 (76-129)||(47807159-47807212)
chr4 (24-129)||(8013219-8013327)
chr4 (7-70)||(39078035-39078098)
chr4 (6-108)||(48793797-48793901)
chr4 (190-235)||(10591500-10591545)
chr4 (1-70)||(17186993-17187062)
chr4 (190-235)||(30776481-30776526)
chr4 (190-235)||(37788529-37788574)
chr4 (190-235)||(39969986-39970031)
chr4 (3-76)||(47806787-47806860)
chr4 (190-235)||(53677476-53677521)
chr4 (7-78)||(16605038-16605109)
chr4 (24-124)||(37911798-37911901)
chr4 (9-124)||(53848366-53848484)
chr4 (1-70)||(8178431-8178499)
chr4 (190-235)||(29899793-29899838)
chr4 (190-235)||(30777565-30777610)
chr4 (6-108)||(35310913-35311018)
chr4 (190-235)||(38940947-38940992)
chr4 (26-120)||(47516330-47516427)
chr4 (190-235)||(47807273-47807318)
chr4 (190-246)||(3043153-3043209)
chr4 (26-70)||(41414789-41414833)
chr4 (6-70)||(42915406-42915470)
chr4 (190-234)||(50768523-50768567)
chr4 (7-70)||(14332668-14332731)
chr4 (190-235)||(9798072-9798117)
chr4 (194-235)||(17236293-17236334)
chr4 (190-235)||(28681737-28681782)
chr4 (9-70)||(35529551-35529612)
chr4 (194-239)||(52713137-52713182)
chr4 (24-69)||(55580562-55580607)
chr4 (26-70)||(2229175-2229219)
chr4 (26-70)||(26916253-26916297)
chr4 (24-121)||(28318555-28318655)
chr4 (25-70)||(5841971-5842016)
chr4 (190-235)||(30011951-30011996)
chr4 (190-235)||(32012324-32012369)
chr4 (190-235)||(43980576-43980621)
chr4 (190-239)||(49902105-49902154)
chr4 (194-235)||(55937700-55937741)
chr4 (198-234)||(5222291-5222327)
chr4 (25-57)||(24940281-24940313)
chr4 (24-124)||(28142756-28142860)
chr4 (26-70)||(47867807-47867851)
[»] chr8 (75 HSPs)
chr8 (1-129)||(24612618-24612748)
chr8 (1-129)||(25321724-25321854)
chr8 (1-129)||(11043950-11044080)
chr8 (1-129)||(27752479-27752609)
chr8 (1-129)||(33851161-33851291)
chr8 (1-129)||(36537951-36538081)
chr8 (1-124)||(35259950-35260075)
chr8 (4-129)||(32678647-32678774)
chr8 (1-129)||(44052513-44052644)
chr8 (5-129)||(27621027-27621153)
chr8 (1-129)||(37597963-37598093)
chr8 (4-129)||(3099848-3099976)
chr8 (4-129)||(35346442-35346569)
chr8 (1-129)||(35344259-35344390)
chr8 (1-129)||(11992620-11992751)
chr8 (1-129)||(44411347-44411478)
chr8 (3-129)||(39187129-39187256)
chr8 (44-129)||(44358629-44358716)
chr8 (3-124)||(17713116-17713240)
chr8 (52-129)||(37567569-37567648)
chr8 (9-77)||(24510876-24510944)
chr8 (77-129)||(31133167-31133219)
chr8 (6-86)||(31133765-31133847)
chr8 (22-116)||(16635489-16635585)
chr8 (3-129)||(40487803-40487939)
chr8 (8-129)||(12108069-12108192)
chr8 (16-124)||(2238736-2238835)
chr8 (6-70)||(35525475-35525539)
chr8 (1-129)||(5217283-5217414)
chr8 (7-78)||(34890385-34890456)
chr8 (26-124)||(8673298-8673398)
chr8 (190-239)||(27621214-27621263)
chr8 (190-235)||(27752670-27752715)
chr8 (4-70)||(4047113-4047180)
chr8 (22-86)||(16635353-16635419)
chr8 (24-70)||(13144180-13144226)
chr8 (190-235)||(3100037-3100082)
chr8 (190-235)||(11044141-11044186)
chr8 (190-235)||(11992812-11992857)
chr8 (26-124)||(26954535-26954636)
chr8 (190-235)||(31133061-31133106)
chr8 (190-235)||(35260141-35260186)
chr8 (190-235)||(35344451-35344496)
chr8 (190-235)||(37567463-37567508)
chr8 (190-235)||(37598153-37598198)
chr8 (190-235)||(41426423-41426468)
chr8 (190-239)||(44411237-44411286)
chr8 (89-129)||(34713511-34713551)
chr8 (7-70)||(7858437-7858500)
chr8 (22-86)||(16635621-16635687)
chr8 (7-70)||(24892716-24892779)
chr8 (190-233)||(32678543-32678586)
chr8 (190-233)||(33851057-33851100)
chr8 (190-235)||(24612512-24612557)
chr8 (190-235)||(25321618-25321663)
chr8 (190-235)||(35346336-35346381)
chr8 (202-235)||(44052717-44052750)
chr8 (26-70)||(7022591-7022635)
chr8 (48-124)||(16643188-16643267)
chr8 (3-70)||(41809022-41809090)
chr8 (7-70)||(8711754-8711817)
chr8 (27-70)||(38072114-38072157)
chr8 (24-70)||(13143659-13143705)
chr8 (24-70)||(36190666-36190712)
chr8 (27-69)||(41362846-41362888)
chr8 (190-239)||(13143847-13143896)
chr8 (190-239)||(15824665-15824714)
chr8 (190-239)||(29920296-29920345)
chr8 (190-235)||(40486524-40486569)
chr8 (9-50)||(41426190-41426231)
chr8 (202-235)||(44358523-44358556)
chr8 (199-239)||(12108248-12108288)
chr8 (22-124)||(16635757-16635860)
chr8 (2-70)||(17314723-17314790)
chr8 (76-124)||(41362450-41362497)
[»] chr7 (83 HSPs)
chr7 (1-129)||(36576307-36576437)
chr7 (1-129)||(44600335-44600465)
chr7 (1-129)||(43108000-43108131)
chr7 (1-129)||(32491202-32491331)
chr7 (1-129)||(23731451-23731579)
chr7 (1-129)||(35181081-35181211)
chr7 (1-129)||(40560271-40560401)
chr7 (1-129)||(41815788-41815918)
chr7 (1-129)||(45598793-45598923)
chr7 (3-129)||(3157327-3157455)
chr7 (3-129)||(19933150-19933278)
chr7 (3-129)||(19964289-19964417)
chr7 (3-129)||(34808110-34808238)
chr7 (4-122)||(9818372-9818491)
chr7 (4-122)||(10720297-10720416)
chr7 (4-121)||(47383298-47383417)
chr7 (1-124)||(21654221-21654346)
chr7 (1-129)||(23106341-23106472)
chr7 (1-128)||(18206415-18206533)
chr7 (1-129)||(42617560-42617690)
chr7 (22-129)||(48879298-48879407)
chr7 (4-129)||(41889063-41889190)
chr7 (35-129)||(40583068-40583164)
chr7 (42-129)||(22111425-22111514)
chr7 (1-129)||(48937984-48938112)
chr7 (1-129)||(48943010-48943138)
chr7 (9-129)||(30082261-30082372)
chr7 (1-89)||(7989425-7989517)
chr7 (1-76)||(41890410-41890485)
chr7 (9-77)||(18800912-18800980)
chr7 (31-124)||(39348708-39348803)
chr7 (190-235)||(18206308-18206353)
chr7 (190-235)||(35181272-35181317)
chr7 (16-129)||(39337431-39337549)
chr7 (190-235)||(42617751-42617796)
chr7 (190-235)||(43107894-43107939)
chr7 (6-108)||(47778651-47778755)
chr7 (7-78)||(25944456-25944527)
chr7 (190-235)||(7989297-7989342)
chr7 (190-235)||(19933044-19933089)
chr7 (190-235)||(19964183-19964228)
chr7 (190-235)||(40560462-40560507)
chr7 (190-235)||(41815682-41815727)
chr7 (190-235)||(48879468-48879513)
chr7 (190-235)||(48937878-48937923)
chr7 (190-230)||(21654115-21654155)
chr7 (191-235)||(41890232-41890276)
chr7 (7-70)||(16562659-16562722)
chr7 (7-70)||(16602940-16603003)
chr7 (7-70)||(18102440-18102503)
chr7 (4-129)||(33152941-33153058)
chr7 (27-70)||(46760444-46760487)
chr7 (26-73)||(47557930-47557977)
chr7 (190-235)||(3157516-3157561)
chr7 (190-235)||(9818548-9818593)
chr7 (190-235)||(10720473-10720518)
chr7 (27-129)||(22369145-22369250)
chr7 (190-235)||(23106533-23106578)
chr7 (190-235)||(23731640-23731685)
chr7 (40-77)||(29236205-29236242)
chr7 (190-235)||(32491096-32491141)
chr7 (190-235)||(34808299-34808344)
chr7 (190-235)||(41889251-41889296)
chr7 (76-124)||(41890342-41890391)
chr7 (190-235)||(44600526-44600571)
chr7 (190-234)||(47383486-47383530)
chr7 (7-70)||(14805781-14805844)
chr7 (7-70)||(15252775-15252838)
chr7 (9-60)||(21761947-21761998)
chr7 (27-70)||(24151777-24151820)
chr7 (26-107)||(35069013-35069096)
chr7 (27-70)||(39174181-39174224)
chr7 (7-57)||(6190925-6190975)
chr7 (206-235)||(22111319-22111348)
chr7 (194-235)||(29236057-29236098)
chr7 (190-239)||(33153119-33153168)
chr7 (76-129)||(35084196-35084249)
chr7 (26-124)||(35888110-35888210)
chr7 (190-235)||(36576498-36576542)
chr7 (206-235)||(40583241-40583270)
chr7 (6-70)||(22631966-22632030)
chr7 (190-234)||(35084091-35084135)
chr7 (24-124)||(38260231-38260335)
[»] chr1 (87 HSPs)
chr1 (1-127)||(49924309-49924437)
chr1 (1-129)||(29488638-29488768)
chr1 (1-129)||(38942581-38942711)
chr1 (1-129)||(40935753-40935883)
chr1 (1-129)||(40960614-40960744)
chr1 (1-129)||(44875069-44875199)
chr1 (1-124)||(46949211-46949336)
chr1 (4-129)||(26907229-26907356)
chr1 (1-129)||(31970449-31970578)
chr1 (1-129)||(18036435-18036564)
chr1 (5-129)||(23873967-23874093)
chr1 (1-129)||(25990639-25990768)
chr1 (4-121)||(9127936-9128055)
chr1 (4-129)||(15285697-15285824)
chr1 (4-129)||(28017551-28017678)
chr1 (4-129)||(39026386-39026512)
chr1 (4-129)||(43656177-43656303)
chr1 (4-129)||(45358016-45358143)
chr1 (5-129)||(28916655-28916781)
chr1 (1-129)||(40219947-40220076)
chr1 (4-129)||(18913486-18913611)
chr1 (4-129)||(18852116-18852243)
chr1 (1-129)||(4529078-4529207)
chr1 (9-129)||(35941739-35941861)
chr1 (4-121)||(26479632-26479751)
chr1 (1-120)||(47996846-47996965)
chr1 (3-118)||(35189092-35189210)
chr1 (1-129)||(6848446-6848574)
chr1 (1-98)||(35884112-35884211)
chr1 (1-129)||(36383818-36383948)
chr1 (6-108)||(44149010-44149114)
chr1 (43-123)||(15311110-15311192)
chr1 (25-129)||(51339035-51339142)
chr1 (3-124)||(7397602-7397725)
chr1 (190-235)||(23873861-23873906)
chr1 (190-235)||(26907125-26907170)
chr1 (190-235)||(38942475-38942520)
chr1 (190-235)||(40220137-40220182)
chr1 (190-234)||(46949402-46949446)
chr1 (7-70)||(6786717-6786780)
chr1 (7-78)||(15959850-15959921)
chr1 (7-70)||(43667487-43667550)
chr1 (25-129)||(51840633-51840740)
chr1 (1-124)||(41063634-41063760)
chr1 (194-239)||(15285888-15285933)
chr1 (190-235)||(18852304-18852349)
chr1 (194-235)||(25990833-25990874)
chr1 (190-235)||(28916549-28916594)
chr1 (190-235)||(31970343-31970388)
chr1 (190-235)||(40935647-40935692)
chr1 (190-235)||(43656071-43656116)
chr1 (190-230)||(40960513-40960553)
chr1 (7-70)||(6787209-6787272)
chr1 (7-70)||(12449154-12449217)
chr1 (192-235)||(15311260-15311303)
chr1 (7-70)||(32624193-32624256)
chr1 (24-70)||(7468171-7468217)
chr1 (4-66)||(23392386-23392448)
chr1 (24-70)||(28016962-28017008)
chr1 (190-235)||(18036625-18036670)
chr1 (190-235)||(18913379-18913424)
chr1 (190-235)||(39026280-39026325)
chr1 (190-235)||(44875260-44875305)
chr1 (1-70)||(47600258-47600327)
chr1 (190-235)||(49924500-49924545)
chr1 (26-70)||(2125967-2126011)
chr1 (199-235)||(29488838-29488874)
chr1 (26-70)||(39555773-39555817)
chr1 (7-70)||(1820296-1820358)
chr1 (190-225)||(13291874-13291909)
chr1 (24-124)||(16661431-16661534)
chr1 (8-55)||(24728860-24728907)
chr1 (190-229)||(46803708-46803747)
chr1 (24-70)||(298885-298931)
chr1 (24-70)||(6785353-6785399)
chr1 (193-235)||(6848343-6848385)
chr1 (7-57)||(16854015-16854065)
chr1 (8-70)||(33369434-33369496)
chr1 (6-60)||(33431440-33431493)
chr1 (7-57)||(46542861-46542911)
chr1 (8-70)||(47026375-47026437)
chr1 (6-108)||(3076175-3076278)
chr1 (190-235)||(35941922-35941967)
chr1 (7-59)||(4672779-4672831)
chr1 (4-56)||(13136781-13136833)
chr1 (26-70)||(42966000-42966044)
chr1 (6-50)||(50665136-50665180)
[»] chr5 (57 HSPs)
chr5 (1-129)||(8146150-8146280)
chr5 (1-124)||(35462860-35462985)
chr5 (4-129)||(30086685-30086812)
chr5 (1-129)||(8541701-8541830)
chr5 (1-129)||(16286220-16286350)
chr5 (1-129)||(31690757-31690887)
chr5 (1-129)||(42364931-42365057)
chr5 (4-129)||(20914754-20914881)
chr5 (1-121)||(13146621-13146743)
chr5 (4-126)||(25962592-25962716)
chr5 (1-129)||(12638782-12638911)
chr5 (41-129)||(31316938-31317028)
chr5 (1-129)||(37066360-37066490)
chr5 (31-129)||(24432537-24432637)
chr5 (1-129)||(24439464-24439594)
chr5 (1-120)||(8143827-8143947)
chr5 (1-121)||(20452567-20452690)
chr5 (190-235)||(24432431-24432476)
chr5 (190-235)||(25962479-25962524)
chr5 (190-235)||(31316832-31316877)
chr5 (7-107)||(42273529-42273632)
chr5 (190-234)||(20914942-20914986)
chr5 (6-78)||(39505442-39505514)
chr5 (7-70)||(11262071-11262134)
chr5 (7-70)||(12730205-12730268)
chr5 (7-78)||(20643894-20643965)
chr5 (24-78)||(9957626-9957680)
chr5 (190-235)||(8146044-8146089)
chr5 (40-124)||(17825340-17825425)
chr5 (6-108)||(25840742-25840847)
chr5 (10-129)||(2002270-2002381)
chr5 (7-70)||(8225343-8225406)
chr5 (24-124)||(8506353-8506456)
chr5 (8-70)||(34425212-34425273)
chr5 (27-121)||(8959559-8959656)
chr5 (190-235)||(12638972-12639017)
chr5 (190-235)||(13146812-13146857)
chr5 (190-235)||(16286114-16286159)
chr5 (190-235)||(31690651-31690696)
chr5 (5-70)||(32433552-32433616)
chr5 (190-234)||(24439655-24439699)
chr5 (30-70)||(38280748-38280788)
chr5 (24-124)||(28906984-28907087)
chr5 (24-124)||(28943379-28943482)
chr5 (7-70)||(37522777-37522840)
chr5 (7-70)||(37562949-37563012)
chr5 (28-70)||(104438-104480)
chr5 (25-59)||(38130345-38130379)
chr5 (190-235)||(8541595-8541640)
chr5 (190-235)||(35462750-35462794)
chr5 (190-235)||(37066254-37066299)
chr5 (1-107)||(41625689-41625798)
chr5 (190-231)||(42365118-42365159)
chr5 (26-70)||(842753-842797)
chr5 (6-50)||(4463223-4463267)
chr5 (5-57)||(11857938-11857990)
chr5 (192-235)||(30086578-30086622)
[»] chr6 (31 HSPs)
chr6 (1-129)||(30949025-30949155)
chr6 (1-129)||(31887258-31887389)
chr6 (1-129)||(10227802-10227932)
chr6 (1-129)||(12278596-12278726)
chr6 (1-129)||(17721946-17722076)
chr6 (3-129)||(33756148-33756276)
chr6 (1-129)||(373989-374119)
chr6 (1-129)||(17598183-17598313)
chr6 (4-129)||(30766339-30766466)
chr6 (9-124)||(32882835-32882941)
chr6 (190-234)||(30766527-30766571)
chr6 (4-124)||(4031881-4032004)
chr6 (1-124)||(4987834-4987960)
chr6 (190-235)||(374180-374225)
chr6 (6-108)||(7275053-7275159)
chr6 (194-235)||(17721840-17721881)
chr6 (190-235)||(30949216-30949261)
chr6 (7-70)||(3095908-3095971)
chr6 (7-70)||(21542329-21542392)
chr6 (7-70)||(34177828-34177891)
chr6 (1-124)||(3888319-3888444)
chr6 (190-236)||(5822064-5822110)
chr6 (193-235)||(12278790-12278832)
chr6 (24-70)||(16013589-16013635)
chr6 (190-235)||(10227993-10228038)
chr6 (24-124)||(5822162-5822266)
chr6 (7-70)||(35129242-35129305)
chr6 (24-70)||(1130433-1130479)
chr6 (190-235)||(5121487-5121532)
chr6 (190-235)||(17598374-17598419)
chr6 (190-234)||(21964038-21964082)
[»] scaffold0495 (2 HSPs)
scaffold0495 (1-129)||(4521-4650)
scaffold0495 (190-235)||(4711-4756)
[»] scaffold0018 (1 HSPs)
scaffold0018 (27-70)||(154792-154835)
[»] scaffold0132 (2 HSPs)
scaffold0132 (25-70)||(910-955)
scaffold0132 (25-70)||(8870-8915)
[»] scaffold0009 (1 HSPs)
scaffold0009 (6-70)||(157672-157737)
[»] scaffold0045 (1 HSPs)
scaffold0045 (26-70)||(77887-77931)
[»] scaffold0442 (1 HSPs)
scaffold0442 (30-70)||(9979-10019)


Alignment Details
Target: chr3 (Bit Score: 113; Significance: 2e-57; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 51255079 - 51255207
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatct 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  51255079 tcctaaaatataagtaaaaaaatcttattttctttgtctcaaaatataagtaaaaaagatcaacttttatgttatttatgttttttcaaacaaatcatct 51255178  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||| ||||||||||||||||||||    
T  51255179 tttccaatctaaaattaaatgcaagttgc 51255207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 46819940 - 46820070
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||  |||||||||||| |||||||||||    
T  46819940 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataaataaaaaagatcaacttttatgctatttttatgtttttttaaacaaatcat 46820039  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  46820040 cttttccaatgtaaaattaaatgcaagttgc 46820070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 21654135 - 21654266
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatca 97  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  21654135 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgtttttttcaaacaaatca 21654234  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||||||| ||||    
T  21654235 tcttttccaatgtaaaattaaatgcaaattgc 21654266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 1335001 - 1335131
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||| |||||||||||  |||||||||||||||||||||||    
T  1335001 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgttattattatgttttttcaaacaaatcat 1335100  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||| |||||||||||||||||||| ||||    
T  1335101 ctttttcaatgtaaaattaaatgcaaattgc 1335131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16739384 - 16739263
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| |||  |||| ||||||||||||||||||    
T  16739384 tcctaaaatataagtaaaaaaatctgattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcat 16739285  T
Q  99 cttttccaatgtaaaattaaat 120  Q
    ||||||||||||||||||||||    
T  16739284 cttttccaatgtaaaattaaat 16739263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 45781290 - 45781418
Alignment:
Q  4 taaaatataagtaaaaaca-tctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatct 100  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||  |||||||||||||||||||||||    
T  45781290 taaaatataagaaaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatct 45781389  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||| ||||||||    
T  45781390 tttccaatgtaaaattaaattcaagttgc 45781418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 13541168 - 13541298
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||  |||||  ||| || ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  13541168 tcctaaaatataaacaaaaaattcttatattctttgtctcaaaatataagaaaaaaagaccaacttttatgttattattatgttttttcgaacaaatcat 13541267  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  13541268 cttttccaatgtaaaattaaatgcaaattgc 13541298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 23513458 - 23513588
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||  ||||||||||||||||||| |||    
T  23513458 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaaacat 23513557  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||| |||||||||||||||||||| ||||    
T  23513558 ctttttcaatgtaaaattaaatgcaaattgc 23513588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 26641341 - 26641211
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||  |||||||||||||||||||||||    
T  26641341 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaacaccaacttttatgctattattatgttttttcaaacaaatcat 26641242  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||| ||| |||||||||||||||| ||||    
T  26641241 ctttttcaaggtaaaattaaatgcaaattgc 26641211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 55400629 - 55400759
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| || |||| ||||||||||||||||||||| |||||||||  ||||||||| ||||  ||||||||||||||||||||||    
T  55400629 tcctaaaatataagcaaaaaaatttcatattctttgtctcaaaatataagcaaaaaagacttacttttatgctattattatgttttttcaaacaaatcat 55400728  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  55400729 cttttccaatgtaaaattaaatgcaaattgc 55400759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 43575849 - 43575978
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgt-tttttcaaacaaatcatc 99  Q
    |||||||||||||| ||||| ||||| |||| |||||||||||||||||| |||||||| ||||||||||| ||||| | | ||||||||||||||||||    
T  43575849 tcctaaaatataagcaaaaaaatctctttttttttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgtttttcaaacaaatcatc 43575948  T
Q  100 ttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||| ||||||||||||||||||||||||    
T  43575949 ttttctaatgtaaaattaaatgcaagttgc 43575978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 31126106 - 31126233
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||  ||||||||||||||||||||  ||  ||||||||||||||||||||||| ||    
T  31126106 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataaacaaaaaagaccaacttttatgccattattatgttttttcaaacaaatcatttt 31126205  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||| ||||    
T  31126206 ttccaatgtaaaattaaatgcaaattgc 31126233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 46580430 - 46580557
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| || |||| ||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||||||||| ||    
T  46580430 taaaatataagcaaaaaaatttcatattctttgtctcaaaatataagtaaaaaagaccaacttttatgccattattatgttttttcaaacaaatcatatt 46580529  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    || |||||||||||||||||||| ||||    
T  46580530 ttacaatgtaaaattaaatgcaaattgc 46580557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 53020073 - 53020204
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatca 97  Q
    |||||||||||||| ||||| ||||||| || ||||||||||||||||||||||||| ||||||||||||| |||  ||||| |||||||||||||||||    
T  53020073 tcctaaaatataagcaaaaaaatctcatattttttgtctcaaaatataagtaaaaaataccaacttttatgctattattatgtttttttcaaacaaatca 53020172  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||| |||||||||||||||||||| ||||    
T  53020173 tctttttcaatgtaaaattaaatgcaaattgc 53020204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 32322468 - 32322338
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||| |  ||||||| ||  ||||||||||||||||||||| ||    
T  32322468 tcctaaaatataagcaaataaatctcattttctttgtctcaaaatataagtaaaaaagactagattttatgctatttttatgttttttcaaacaaattat 32322369  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||| |||||||||||||||| ||||||||    
T  32322368 ctttttcaatgtaaaattaaatacaagttgc 32322338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 51426512 - 51426635
Alignment:
Q  5 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg--ttttttcaaacaaatcatct 100  Q
    |||||||||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||||||||||||  |||||  ||||||||||||||||||||    
T  51426512 aaaatataagcaaaaaaatctcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttattcttatgttttttttcaaacaaatcatct 51426611  T
Q  101 tttccaatgtaaaattaaatgcaa 124  Q
    |||| |||||||||||||||||||    
T  51426612 tttctaatgtaaaattaaatgcaa 51426635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 28793055 - 28793183
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| |  | ||||| |||||||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  28793055 taaaatataagcaaaaaaaatttattttatttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatctt 28793154  T
Q  102 ttccaatgt-aaaattaaatgcaagttgc 129  Q
    ||| ||||| |||||||||||||||||||    
T  28793155 ttctaatgtaaaaattaaatgcaagttgc 28793183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 34022512 - 34022622
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||  ||||||| ||  ||||||||||||||||||||||||    
T  34022512 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaaaaccattttttatgctatttttatgttttttcaaacaaatcat 34022611  T
Q  99 cttttccaatg 109  Q
    |||||||||||    
T  34022612 cttttccaatg 34022622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 37324314 - 37324183
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg----ttttttcaaacaaatca 97  Q
    ||||||||||| ||||| ||| ||| |||||||||| |||||||||| ||||||||||||||||||||| ||  |||||    |||||||||||||||||    
T  37324314 taaaatataagcaaaaaaatcacatattctttgtcttaaaatataagcaaaaaagaccaacttttatgtcattattatgttttttttttcaaacaaatca 37324215  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||||||| ||||    
T  37324214 tcttttccaatgtaaaattaaatgcaaattgc 37324183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 36189235 - 36189105
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttca-aacaaatca 97  Q
    ||||||| |||||| ||||| ||| ||||||||||||| ||||||||||| ||||||||||| ||||||||||||  ||||||||||||| || |||||     
T  36189235 tcctaaattataagcaaaaaaatcacattttctttgtc-caaaatataagcaaaaaagaccatcttttatgttattattatgttttttcacaaaaaatct 36189137  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||| |||||||||||||||| ||||    
T  36189136 tcttttccaaagtaaaattaaatgcaaattgc 36189105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 46296266 - 46296176
Alignment:
Q  41 aaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||| |||||||| ||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  46296266 aaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttccgatgtaaaattaaatgcaagttgc 46296176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 52172235 - 52172109
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgtttttt-caaacaaatcatct 100  Q
    ||||||||||| ||||| |||||||||| ||| |||||||||||||| ||||||||  || ||||||| |||||  ||||||||| ||||||||||||||    
T  52172235 taaaatataagaaaaaa-atctcatttttttt-tctcaaaatataagcaaaaaagattaatttttatgctatttttatgtttttttcaaacaaatcatct 52172138  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    ||| |||||||||||||||||||||||||    
T  52172137 ttttcaatgtaaaattaaatgcaagttgc 52172109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45347897 - 45347828
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  45347897 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttat 45347828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 52252003 - 52252055
Alignment:
Q  75 tttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagtt 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52252003 tttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagtt 52252055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 22456227 - 22456109
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttc 104  Q
    |||||||||||| | |||||||||||| || |||| |||||| |||||||||||||||||||     ||| ||||||||||||||| |||| ||||||||    
T  22456227 tataagtaaaaaaaactcattttctttatcccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatcttttc 22456129  T
Q  105 caatgtaaaattaaatgcaa 124  Q
    ||| | ||||||||||||||    
T  22456128 caaaggaaaattaaatgcaa 22456109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2927166 - 2927276
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta---tgttttttcaaacaaatca 97  Q
    |||| ||||||||||||||| | |||||||||||||||| |||||||||| ||||||||| |||||||||  ||||||   |  ||||| ||| ||||||    
T  2927166 tcctgaaatataagtaaaaaaaactcattttctttgtcttaaaatataagcaaaaaagacaaacttttattatatttaatcttgtttttaaaaaaaatca 2927265  T
Q  98 tcttttccaat 108  Q
    |||||||||||    
T  2927266 tcttttccaat 2927276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33974805 - 33974738
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaactttt 68  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||    
T  33974805 tcctataatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagacaaactttt 33974738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 22479273 - 22479155
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttc 104  Q
    |||||||||||| |  |||||||||||||| |||| |||||| ||||||||| |||||||||     ||| ||||||||||||||| |||| ||||||||    
T  22479273 tataagtaaaaaaaattcattttctttgtcccaaattataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaa-aaattatcttttc 22479175  T
Q  105 caatgtaaaattaaatgcaa 124  Q
    ||| | ||||||||||||||    
T  22479174 caaaggaaaattaaatgcaa 22479155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 38401271 - 38401397
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatc 96  Q
    ||||||| |||||| ||||| | ||||||||||||||| |||| |||||| |||||||| ||||||||||     ||| ||||||||||||||| ||||     
T  38401271 tcctaaattataagcaaaaaaaactcattttctttgtcccaaattataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaa-aaata 38401369  T
Q  97 atcttttccaatgtaaaattaaatgcaa 124  Q
    |||||||||||   ||||||||||||||    
T  38401370 atcttttccaaaagaaaattaaatgcaa 38401397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 23209505 - 23209376
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcat 98  Q
    ||||| |||||| ||||| | |||||||||||||||| ||| |||||| |||||||||||||||||||     ||| ||||||| ||||||| |||||||    
T  23209505 ctaaattataagcaaaaaaaactcattttctttgtcttaaattataagcaaaaaagaccaacttttatcatatttaattatgttatttcaaa-aaatcat 23209407  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||| |||| |  ||||||||||||| ||||    
T  23209406 ctttcccaaagagaaattaaatgcaaattgc 23209376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 49068019 - 49068072
Alignment:
Q  76 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  49068019 ttatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaaattgc 49068072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 14752448 - 14752377
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 78  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  14752448 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttattta 14752377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 10251902 - 10252028
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatc 96  Q
    ||||||| ||||| |||||| |  ||||||||||||||||||| |||||| |||||| ||||||||||||     ||| ||||||||||||||| | ||     
T  10251902 tcctaaattataactaaaaaaaattcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agatt 10252000  T
Q  97 atcttttccaatgtaaaattaaatgcaa 124  Q
    ||||||||||| | ||||||||| ||||    
T  10252001 atcttttccaaaggaaaattaaaagcaa 10252028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 32322277 - 32322232
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  32322277 catctttccatgaaacttattccaaggagaacacaaaaaattatac 32322232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 51309495 - 51309540
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  51309495 catctttctatgaaacttattccaagaagaacacaaaaaattatac 51309540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 52252118 - 52252167
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 239  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  52252118 catctttccatgaaacttattccaagaagaacacaaaaaattatacttca 52252167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 26641150 - 26641106
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattata 234  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  26641150 catctttccatgaaacttattccaaggagaacacaaaaaattata 26641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 49067007 - 49067079
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt 76  Q
    ||||||||||| |||||  | |||| ||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  49067007 taaaatataagcaaaaaattatcatattctttgtctcaaaatataagcaaaaaagatcaacttttatgctatt 49067079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 21214135 - 21214258
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatc 99  Q
    |||| |||||| ||||| | ||||||||||||||| |||| |||||| |||||||| ||||||||||     ||| ||||||||||||||| | || |||    
T  21214135 taaattataagcaaaaaaaactcattttctttgtcccaaattataagcaaaaaagatcaacttttatcacatttaattatgttttttcaaa-atattatc 21214233  T
Q  100 ttttccaatgtaaaattaaatgcaa 124  Q
    ||||||||   ||||||||||||||    
T  21214234 ttttccaaatgaaaattaaatgcaa 21214258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 2994620 - 2994519
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatg 121  Q
    ||||||||||||| |||| |||||| ||||| ||| |||||||||     ||| ||||||||||||||| |||| ||||||||||| | |||||||||||    
T  2994620 cattttctttgtcccaaattataagaaaaaatgacaaacttttatcgtatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaatg 2994522  T
Q  122 caa 124  Q
    |||    
T  2994521 caa 2994519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 21654327 - 21654372
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  21654327 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 21654372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 45347751 - 45347706
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  45347751 catctttccatgaaacttattccaaggagaacacaaaaaatcatac 45347706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 55400820 - 55400865
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  55400820 catctttccatgaaacttattccaaagagaacacaaaaaattatac 55400865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 1335192 - 1335232
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaat 230  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  1335192 catctttccatgaaacttattccaaggagaacacaaaaaat 1335232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 16739197 - 16739153
Alignment:
Q  191 atctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||    
T  16739197 atctttccatgaaacttattccaaggagaacacaacaaattatac 16739153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 46557435 - 46557379
Alignment:
Q  14 gtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||| | |||||||||||||||| |||||||||||||||||||| || ||||||    
T  46557435 gtaaaaaaaactcattttctttgtcttaaaatataagtaaaaaagacaaatttttat 46557379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 49583879 - 49583979
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 119  Q
    |||||||| | |||| |||| |||||| |||||||||||||||||||     ||| ||||||||||||||| |||| ||||||||||| | |||||||||    
T  49583879 ctcattttttctgtcccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaagaaaaattaaa 49583977  T
Q  120 tg 121  Q
    ||    
T  49583978 tg 49583979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 46296115 - 46296076
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaa 229  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  46296115 catctttccatgaaacttattccaaggagaacacaaaaaa 46296076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 10114803 - 10114928
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatc 96  Q
    ||||||| |||||| ||||| |  ||||||||||||||||||| |||||| |||||| | ||||||||||     ||| |||||||||||| |||| ||     
T  10114803 tcctaaattataagcaaaaaaaattcattttctttgtctcaaattataagcaaaaaata-caacttttatcatatttaattatgttttttc-aacagatt 10114900  T
Q  97 atcttttccaatgtaaaattaaatgcaa 124  Q
    ||||||||||| | ||||||||| ||||    
T  10114901 atcttttccaaaggaaaattaaaagcaa 10114928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 34194807 - 34194905
Alignment:
Q  29 tttctttgtctcaaaatataagtaaaaaagaccaacttttatg----ttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 124  Q
    |||||||||| || | |||||| |||||||||||||||||||     ||| ||||||| ||||||| |||| ||||||||||| | ||||||||||||||    
T  34194807 tttctttgtcccagattataagcaaaaaagaccaacttttatcatttttaattatgttgtttcaaa-aaattatcttttccaaaggaaaattaaatgcaa 34194905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 51255272 - 51255318
Alignment:
Q  194 tttctatgaaacttattccaaggagaacacaaaaaattatacttcat 240  Q
    |||| |||||||||||| | |||||||||||||||||||||||||||    
T  51255272 tttccatgaaacttatttctaggagaacacaaaaaattatacttcat 51255318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 28793244 - 28793289
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||| |||||||||||| |||||||||||||||||    
T  28793244 catctttccatgaaatttattccaaggataacacaaaaaattatac 28793289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 31126294 - 31126339
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||    
T  31126294 catctttccataaaacttatttcaaggagaacacaaaaaattatac 31126339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 34022681 - 34022726
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||    
T  34022681 catctttccataaaacttatttcaaggagaacacaaaaaattatac 34022726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 36546457 - 36546518
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaactttt 68  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||    
T  36546457 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaactttt 36546518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 36561858 - 36561797
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaactttt 68  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||    
T  36561858 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaactttt 36561797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 43576039 - 43576084
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||    
T  43576039 catctttccatgaaacttattcgaaggagaacacaaaaaatcatac 43576084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 45781479 - 45781524
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||    
T  45781479 catctttccatgaaacttattctaaagagaacacaaaaaattatac 45781524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 11054498 - 11054454
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  11054498 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 11054454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 34105443 - 34105510
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt 77  Q
    |||||| |||||  |||||||||||||| | ||||||||||  |||||||| |||||||||||||||||    
T  34105443 tataagcaaaaaattctcattttctttgcc-caaaatataaacaaaaaagatcaacttttatgttattt 34105510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 53020265 - 53020309
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattata 234  Q
    |||||||| || |||||||||||||| ||||||||||||||||||    
T  53020265 catctttccataaaacttattccaagaagaacacaaaaaattata 53020309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 579389 - 579326
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||| ||| ||||| | ||||||||  || |||||||||||||||||||||||| |||||||||    
T  579389 aatacaagcaaaaaaaactcatttttattatctcaaaatataagtaaaaaagacaaacttttat 579326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 28875290 - 28875361
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 78  Q
    |||||||| ||||| | ||||||||| ||||| ||||||||||| |||||| |  ||||||||| |||||||    
T  28875290 aatataagcaaaaaaagctcattttcattgtcccaaaatataagcaaaaaatataaacttttatcttattta 28875361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 7866706 - 7866660
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||||| ||||||||||  ||||||||| |||||||||    
T  7866706 ctcattttctttgtcccaaaatataaacaaaaaagacaaacttttat 7866660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 26725014 - 26724977
Alignment:
Q  202 aaacttattccaaggagaacacaaaaaattatacttca 239  Q
    ||||||||||||| || |||||||||||||||||||||    
T  26725014 aaacttattccaaagaaaacacaaaaaattatacttca 26724977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 37074860 - 37074905
Alignment:
Q  25 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||||| | ||||||||| ||||||||| |||||||||    
T  37074860 tcattttctttgtcccgaaatataagcaaaaaagacaaacttttat 37074905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 37075049 - 37075098
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 239  Q
    |||||| |||| |||||| |||||| || |||||||||||||||||||||    
T  37075049 catcttcctataaaactttttccaaagaaaacacaaaaaattatacttca 37075098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 46580618 - 46580662
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||| |||||| ||||||||||||||||||||||||    
T  46580618 catctttccatgaa-cttatttcaaggagaacacaaaaaattatac 46580662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 46711881 - 46711836
Alignment:
Q  25 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||||||||||||||||| | |||| || |||||||||    
T  46711881 tcattttctttgtctcaaaatataagcataaaaaacaaacttttat 46711836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 51309323 - 51309391
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaa-aagaccaacttttatgttattt 77  Q
    |||||| ||||| || ||||||| | |||||||||||||||| |||| ||||||||||||||| ||||||    
T  51309323 tataagaaaaaaaatatcatttt-tatgtctcaaaatataagcaaaaaaagaccaacttttatattattt 51309391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 51311554 - 51311618
Alignment:
Q  5 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||| ||||| | || |||||| ||||| ||||||||||||||||||||| || ||||||    
T  51311554 aaaatataagcaaaaaaaacttattttcattgtc-caaaatataagtaaaaaagacaaatttttat 51311618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 51426701 - 51426746
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||| |||||| ||| |||||||||||||||||||    
T  51426701 catctttccatgaaatttattctaagaagaacacaaaaaattatac 51426746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 23311783 - 23311739
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||| ||||||||||| ||||||| | |||||||||    
T  23311783 cattttctttgtcccaaaatataagcaaaaaagtcaaacttttat 23311739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 26207716 - 26207768
Alignment:
Q  5 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaa 57  Q
    |||||||||| ||||| | ||||||||||||||| |||||| |||| ||||||    
T  26207716 aaaatataagcaaaaaaaactcattttctttgtcccaaaatgtaagaaaaaaa 26207768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 49068133 - 49068177
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattata 234  Q
    |||||||| ||||||||||||   |||||||||||||||||||||    
T  49068133 catctttccatgaaacttatttataggagaacacaaaaaattata 49068177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 21539647 - 21539777
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  21539647 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcat 21539746  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  21539747 cttttccaatgtaaaattaaatgcaagttgc 21539777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 38549909 - 38549779
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||  ||||||||||||||| |||||||    
T  38549909 tcctaaaatataagtaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcat 38549810  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  38549809 cttttccaatgtaaaattaaatgcaagttgc 38549779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 33635228 - 33635356
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatct 100  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  33635228 ctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatct 33635327  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    |||| ||||||||||||||||||||||||    
T  33635328 tttctaatgtaaaattaaatgcaagttgc 33635356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 792622 - 792492
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  792622 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaatcat 792523  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  792522 cttttccaatgtaaaattaaatgcaaattgc 792492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 15858876 - 15858746
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| || |||| |||||||||||||||||||||||||||||||||| ||||||| |||  ||||||||||||||| |||||||    
T  15858876 tcctaaaatataagcaaaaaaatttcatattctttgtctcaaaatataagtaaaaaagaccaaattttatgctattattatgttttttcaaataaatcat 15858777  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  15858776 cttttccaatgtaaaattaaatgcaaattgc 15858746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 8784288 - 8784415
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| |||||  |||||| |||||||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||    
T  8784288 taaaatataagcaaaaaattctcatattctttgtctcaaaatataagtaaaaaagaccaacttttatgctattattatgttatttcaaacaaatcatctt 8784387  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    || |||||||||||||||||||| ||||    
T  8784388 tttcaatgtaaaattaaatgcaaattgc 8784415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 29514282 - 29514155
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  29514282 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatctt 29514183  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||  ||||||||||||||||||| ||||    
T  29514182 ttttaatgtaaaattaaatgcaaattgc 29514155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 28492410 - 28492540
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| |||| ||||||||||||| |||||||||| |||||||||||||||||||| |||  |||| ||||||||||||||||||    
T  28492410 tcctaaaatataagcaaaaaaatcttattttctttgtcttaaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcat 28492509  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
     ||||||||||||||||||||||||| ||||    
T  28492510 tttttccaatgtaaaattaaatgcaaattgc 28492540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 29514740 - 29514619
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  29514740 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataag-aaaaaagaccaacttttatgctattattatgttttttcaaacaaatcat 29514642  T
Q  99 cttttccaatgtaaaattaaatg 121  Q
    |||| ||||||||||||||||||    
T  29514641 ctttcccaatgtaaaattaaatg 29514619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 28424165 - 28424289
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| || | || |||||||||||||||| |||| |||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  28424165 tcctaaaatataagcaaaaaaattt-atattctttgtctcaaaatttaagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcat 28424263  T
Q  99 cttttccaatgtaaaattaaatgcaa 124  Q
    ||||||||||||||||||||||||||    
T  28424264 cttttccaatgtaaaattaaatgcaa 28424289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 4033939 - 4033811
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatct 100  Q
    |||||||||||| ||||| |||| |||||||||||||||||||||||| |||||||| ||| ||||||| |||  ||||||||||||||||||| |||||    
T  4033939 ctaaaatataagcaaaaaaatcttattttctttgtctcaaaatataagcaaaaaagatcaatttttatgctattattatgttttttcaaacaaaacatct 4033840  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    ||| |||||||||||||||||||| ||||    
T  4033839 ttttcaatgtaaaattaaatgcaaattgc 4033811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 4091900 - 4092031
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttat-gttttttcaaacaaatca 97  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||| || ||| ||||||||||||| |||  ||||  |||||||||| ||||||    
T  4091900 tcctaaaatataagtaataaaatctcattttctttgtctcaaaatataagcaagaaaaaccaacttttatgctattattatatttttttcaaataaatca 4091999  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||| |||||||||||||||||||||||||    
T  4092000 tctttttcaatgtaaaattaaatgcaagttgc 4092031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 43075643 - 43075770
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| ||||||| || ||||| |||||||||||| |||||| ||||||||||||| ||||  ||||||||||||||||||||||||     
T  43075643 taaaatataagcaaaaaaatctcatattttttgtgtcaaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaatcatcta 43075742  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||| ||||    
T  43075743 ttccaatgtaaaattaaatgcaaattgc 43075770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 5091805 - 5091676
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatg---ttatt-tatgttttttcaaacaaatcatc 99  Q
    ||||||||||||||||| || |||| |||||| |||||||||||||||||||||||||||||||||||   ||||| | | |||||||||||||||||||    
T  5091805 taaaatataagtaaaaaaatttcatattctttatctcaaaatataagtaaaaaagaccaacttttatgccattattatgttttttttcaaacaaatcatc 5091706  T
Q  100 ttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||| |||||||||||||||||||| ||||    
T  5091705 tttttcaatgtaaaattaaatgcaaattgc 5091676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10979082 - 10979198
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||| || |||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  10979082 tcctaaaatataagcaaaaaaatctcattttttttgtctcaaaatat-agcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcat 10979180  T
Q  99 cttttccaatgtaaaatt 116  Q
    ||||||||| ||| ||||    
T  10979181 cttttccaaagtagaatt 10979198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 35832304 - 35832432
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatct 100  Q
    |||||||||||| ||||| || | || ||||||||||||||||||||| |||||||||  | ||||||| ||||  ||||||||||||||||||||||||    
T  35832304 ctaaaatataagcaaaaaaattttatattctttgtctcaaaatataagcaaaaaagacatatttttatgctattattatgttttttcaaacaaatcatct 35832403  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||| ||||||||||||||| ||||    
T  35832404 tttccaatataaaattaaatgcaaattgc 35832432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 10478068 - 10478198
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaaga--ccaacttttatgttattt--atgtttt-ttcaaacaaatcat 98  Q
    ||||||||||| ||||| |||||||||| |||||||||||||||||| |||||| |  |||| ||||||| |||||  ||||||| ||||||||||| ||    
T  10478068 taaaatataagcaaaaaaatctcattttttttgtctcaaaatataagcaaaaaaaaaaccaatttttatgctatttttatgtttttttcaaacaaatgat 10478167  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  10478168 cttttccaatgtaaaattaaatgcaagttgc 10478198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 43451409 - 43451525
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatctttt 103  Q
    ||||||||||  ||||| |||||||||||||||| ||||||||||||||||||||| ||| ||||||||||         ||||||||||||||||||||    
T  43451409 taaaatataaacaaaaaaatctcattttctttgtatcaaaatataagtaaaaaagatcaatttttatgtta---------tttcaaacaaatcatctttt 43451499  T
Q  104 ccaatgtaaaattaaatgcaagttgc 129  Q
     |||||||||||||||||||||||||    
T  43451500 tcaatgtaaaattaaatgcaagttgc 43451525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 14565611 - 14565509
Alignment:
Q  30 ttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgtttttt-caaacaaatcatcttttccaatgtaaaattaaatgcaagt 126  Q
    ||||||||||||||||||||| ||||||||| |||||||||| ||||  |||||||||| |||| ||||||||||||||||||||||||||||||||| |    
T  14565611 ttctttgtctcaaaatataagcaaaaaagactaacttttatgctattattatgtttttttcaaagaaatcatcttttccaatgtaaaattaaatgcaaat 14565512  T
Q  127 tgc 129  Q
    |||    
T  14565511 tgc 14565509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 44803823 - 44803918
Alignment:
Q  35 tgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||  ||||||||||||||  |||| |||||| ||| ||||||||||||||||||||||||||||| ||| ||||    
T  44803823 tgtctcaaaatataagtaaaaaagataaacttttatgttattattatatttttt-aaataaatcatcttttccaatgtaaaattaaatacaaattgc 44803918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 22162249 - 22162340
Alignment:
Q  41 aaaatataagtaaaaaagacc-aacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||| |||||||||  |||||||||| ||||  ||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  22162249 aaaatataagcaaaaaagacttaacttttatgctattattatgttttttcaaacaaataatcttttccaatgtaaaattaaatgcaaattgc 22162340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 29524322 - 29524258
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  29524322 aaatataagtaaaaaaaactcattttctttgtcccaaaatataagtaaaaaagacaaacttttat 29524258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 19263979 - 19264050
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 78  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  19263979 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttattta 19264050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 13823027 - 13822949
Alignment:
Q  1 tcctaaaatataagtaaaaaca-tctcattttctttgtctcaaaatataagtaa-aaaagaccaacttttatgttattt 77  Q
    ||||||| |||||||||||| | |||||||||||||||| |||||||||||||| |||| || ||||||||||||||||    
T  13823027 tcctaaattataagtaaaaaaaatctcattttctttgtcccaaaatataagtaaaaaaatactaacttttatgttattt 13822949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 792431 - 792386
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  792431 catctttccatgaaacttattccaaggagaacacaaaaaattatac 792386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 4092092 - 4092137
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  4092092 catctttccatgaaacttattccaaggagaacacaaaaaattatac 4092137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 14565448 - 14565403
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  14565448 catctttccatgaaacttattccaaggagaacacaaaaaattatac 14565403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 15068639 - 15068755
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatctttt 103  Q
    |||| |||||| ||||| |  |||||||||||||||||||||||||| |||||||| ||| |||||| |||         ||||||  ||||||||||||    
T  15068639 taaattataagcaaaaaaaattcattttctttgtctcaaaatataagcaaaaaagatcaatttttatatta---------tttcaagaaaatcatctttt 15068729  T
Q  104 ccaatgtaaaattaaatgcaagttgc 129  Q
    |||| |||||||||||||||| ||||    
T  15068730 ccaaagtaaaattaaatgcaaattgc 15068755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 21539838 - 21539883
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  21539838 catctttccatgaaacttattccaaggagaacacaaaaaattatac 21539883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 129
Target Start/End: Complemental strand, 18834170 - 18834046
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgtttttt---caaacaaatcatctttt 103  Q
    |||||| ||||| ||| ||||||||||||| ||||||||||| |||||||| ||||||||||  |||  |||||||||||    ||| |||||||| |||    
T  18834170 tataagcaaaaaaatcacattttctttgtcccaaaatataagcaaaaaagatcaacttttattctattattatgttttttttaaaaaaaaatcatc-ttt 18834072  T
Q  104 ccaatgtaaaattaaatgcaagttgc 129  Q
    | || |||||||||||||||| ||||    
T  18834071 ctaaagtaaaattaaatgcaaattgc 18834046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 38070912 - 38071012
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 119  Q
    ||||||||||||||| |||| |||||| ||||||||| |||||||||     ||| ||||||||||||||| |||| ||||||||||| | |||||||||    
T  38070912 ctcattttctttgtcccaaattataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaa 38071010  T
Q  120 tg 121  Q
    ||    
T  38071011 tg 38071012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 25571941 - 25572029
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatcatcttttccaat 108  Q
    ||||||||||||||| ||||||||||| |||||| || |||||||||  ||||||    |||||||| ||| |||||||||||||||||    
T  25571941 ctcattttctttgtcccaaaatataagcaaaaaaaacaaacttttattctatttaatcttgttttttaaaaaaaatcatcttttccaat 25572029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 26998214 - 26998336
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatc 99  Q
    |||| |||||| ||||| || ||||||||||||||  ||| |||||| |||||||||||||||||||     ||| |||| |||||||||| |||| |||    
T  26998214 taaattataagcaaaaaaat-tcattttctttgtcctaaattataagcaaaaaagaccaacttttatcatatttaattatattttttcaaa-aaattatc 26998311  T
Q  100 ttttccaatgtaaaattaaatgcaa 124  Q
    |||||||| | ||||||||||||||    
T  26998312 ttttccaaaggaaaattaaatgcaa 26998336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8701475 - 8701585
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatc 96  Q
    |||| ||||||||| ||||| | |||||||||||| ||| |||||||||  ||||||||| |||||||||  ||||||    |||||||| ||| |||||    
T  8701475 tcctgaaatataagcaaaaaaaactcattttctttatcttaaaatataaacaaaaaagacaaacttttattatatttaatcttgtttttt-aaaaaaatc 8701573  T
Q  97 atcttttccaat 108  Q
    ||||||||||||    
T  8701574 atcttttccaat 8701585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 32009995 - 32010121
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatc 96  Q
    ||||||| |||||| ||||| |  |||||||||||||  |||| ||||||||||||||| ||||||||||     ||| |||| |||||||||| ||||     
T  32009995 tcctaaattataagcaaaaaaaattcattttctttgttccaaattataagtaaaaaagatcaacttttatcatatttaattatattttttcaaa-aaatt 32010093  T
Q  97 atcttttccaatgtaaaattaaatgcaa 124  Q
    ||||||| ||| | ||||||||||||||    
T  32010094 atctttttcaaaggaaaattaaatgcaa 32010121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 10979250 - 10979295
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||    
T  10979250 catctttccatgaaacttattccaagaagaacacaaaaaattatac 10979295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 20380041 - 20380142
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat----ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatg 121  Q
    |||||| |||| | |||| |||||| ||||||||||||||||||| ||||    ||||||||||||||| | || ||||||||||| | |||||||||||    
T  20380041 cattttgtttgacccaaattataagcaaaaaagaccaacttttatcttatttaattatgttttttcaaa-atattatcttttccaaaggaaaattaaatg 20380139  T
Q  122 caa 124  Q
    |||    
T  20380140 caa 20380142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 35832493 - 35832538
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||    
T  35832493 catctttccatgaaatttattccaaggagaacacaaaaaattatac 35832538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 38071666 - 38071586
Alignment:
Q  44 atataagtaaaaaagaccaacttttatgttatt--tatgttt-----tttcaaacaaatcatcttttccaatgtaaaatta 117  Q
    |||||| ||||||||| ||||||||||||||||  |||| ||     ||||||||||||||||||||||||||||||||||    
T  38071666 atataactaaaaaagagcaacttttatgttattattatgattatgtttttcaaacaaatcatcttttccaatgtaaaatta 38071586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 38549718 - 38549673
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||    
T  38549718 catctttccatgaaacttattccaaggagaatacaaaaaattatac 38549673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 44803979 - 44804024
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| || ||||||||||||||||||||||||||||||||||    
T  44803979 catctttccattaaacttattccaaggagaacacaaaaaattatac 44804024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 10478259 - 10478303
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattata 234  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  10478259 catctttccatgaaacttatttcaaggagaacacaaaaaattata 10478303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 18454944 - 18455048
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt-atgtt-ttttcaaacaaatcatctttt 103  Q
    ||||||||| ||||| | |||||||||||||||  |||||||||| ||||||||  || |||||| |||||| || || |||| ||| ||||||||||||    
T  18454944 aaatataagaaaaaaaaactcattttctttgtcctaaaatataagcaaaaaagataaatttttattttatttaatcttgtttttaaaaaaatcatctttt 18455043  T
Q  104 ccaat 108  Q
    |||||    
T  18455044 ccaat 18455048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 28492605 - 28492645
Alignment:
Q  194 tttctatgaaacttattccaaggagaacacaaaaaattata 234  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  28492605 tttccatgaaacttattccaaggagaacacaaaaaattata 28492645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 6110450 - 6110387
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  6110450 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 6110387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 33198915 - 33198852
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| || ||||||    
T  33198915 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaaattttat 33198852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 44442049 - 44442150
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatg--ttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatg 121  Q
    ||||||||||||||| |||| |||||| ||||| || ||||||||||   ||| ||||||||||| ||| |||| |||||||| || | |||||||||||    
T  44442049 ctcattttctttgtcccaaattataaggaaaaa-gagcaacttttattatttaattatgttttttgaaaaaaattatcttttctaaaggaaaattaaatg 44442147  T
Q  122 caa 124  Q
    |||    
T  44442148 caa 44442150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 4033750 - 4033705
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||    
T  4033750 catctttccatgaaacttattttaaggagaacacaaaaaattatac 4033705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 8784476 - 8784521
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||    
T  8784476 catctttccatgaaacttatttcaagaagaacacaaaaaattatac 8784521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11031188 - 11031121
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||| |||||||||||| | ||||||| ||||| |||||| ||||||||||||||| ||||||||||    
T  11031188 tcctaaattataagtaaaaaaa-ctcattt-ctttgactcaaattataagtaaaaaagatcaacttttat 11031121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 15068816 - 15068861
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||||||||||||| |||||||||| |||||||||||||| ||||    
T  15068816 catctttctatgaaatttattccaagaagaacacaaaaaatcatac 15068861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 18833985 - 18833940
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||||||| | |||||||||||||||||    
T  18833985 catctttccatgaaacttattccaagaataacacaaaaaattatac 18833940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 28424352 - 28424389
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaa 227  Q
    |||||||| |||||||||||||||||||||||||||||    
T  28424352 catctttccatgaaacttattccaaggagaacacaaaa 28424389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 43451586 - 43451631
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||    
T  43451586 catctttccatgaaacttattctaaggagaacacaaaaaatcatac 43451631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 32273587 - 32273687
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 119  Q
    |||| ||||||||||  ||| |||||| |||||||||||||||||||     ||| ||||||||||||||| |||| || |||||||| | |||||||||    
T  32273587 ctcaatttctttgtcctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatattttccaaaggaaaattaaa 32273685  T
Q  120 tg 121  Q
    ||    
T  32273686 tg 32273687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 5280761 - 5280698
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | || |||||||||||| ||||||||||| ||||||||| || ||||||    
T  5280761 aatataagcaaaaaaaacttattttctttgtcccaaaatataagcaaaaaagacaaatttttat 5280698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 28858189 - 28858252
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | |||||||||||||||  |||||||||| |||||| || |||||||||    
T  28858189 aatataagcaaaaataactcattttctttgtcctaaaatataagcaaaaaatacaaacttttat 28858252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 45660259 - 45660305
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||||| ||||||||||| |||||| || |||||||||    
T  45660259 ctcattttctttgtcccaaaatataagcaaaaaaaacaaacttttat 45660305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 9294622 - 9294675
Alignment:
Q  76 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||| ||||| | |||||||||||| ||| |||||||||||||||| ||||    
T  9294622 ttatgttatttcataaaaatcatctttttcaaagtaaaattaaatgcaaattgc 9294675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 13822845 - 13822800
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||    
T  13822845 catcttttcatgaaacttattctaagaagaacacaaaaaattatac 13822800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 29514094 - 29514049
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||  |||||| |||||| |||||||||||||||||||||||    
T  29514094 catcttttcatgaaatttattctaaggagaacacaaaaaattatac 29514049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 29514550 - 29514505
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||  ||||||||||||| ||||| |||||||||||||||||    
T  29514550 catcttttcatgaaacttattctaaggataacacaaaaaattatac 29514505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 33933100 - 33933055
Alignment:
Q  84 tttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||| |||||||||||||||| | ||||||||||| |||||||    
T  33933100 tttcaaaaaaatcatcttttccaaagaaaaattaaatgtaagttgc 33933055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 38071513 - 38071476
Alignment:
Q  202 aaacttattccaaggagaacacaaaaaattatacttca 239  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  38071513 aaacttattctaaggagaatacaaaaaattatacttca 38071476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 12872034 - 12872101
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt 77  Q
    |||||| ||||| || ||||||||||| ||| ||||||||||| ||||| | |||||||||| ||||||    
T  12872034 tataagcaaaaaaatttcattttctttatcttaaaatataagt-aaaaatatcaacttttatattattt 12872101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 28599379 - 28599335
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||| ||||||||||  ||||||||| |||||||||    
T  28599379 cattttctttgtcccaaaatataatcaaaaaagacaaacttttat 28599335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 33635417 - 33635461
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattata 234  Q
    |||||||| |||||| |||||||||| | ||||||||||||||||    
T  33635417 catctttccatgaaatttattccaagaaaaacacaaaaaattata 33635461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 41528186 - 41528230
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||| |||||| ||||||||||| ||||||||| |||||||||    
T  41528186 cattttgtttgtcccaaaatataagcaaaaaagacaaacttttat 41528230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 9e-51; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 50768334 - 50768462
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatct 100  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  50768334 ctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatct 50768433  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||    
T  50768434 tttccaatgtaaaattaaatgcaagttgc 50768462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 55937936 - 55937807
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  55937936 tcctaaaatataagcaaaaaaatctcattttctttgtcttaaaatataagcaaaaaagaccaacttttatgatatttttatgttttttcaaacaaatcat 55937837  T
Q  99 cttttccaatgtaaaattaaatgcaagttg 128  Q
    ||||||||||||||||||||||||||||||    
T  55937836 cttttccaatgtaaaattaaatgcaagttg 55937807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 52712950 - 52713080
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||  |||||||||||||||||||||||    
T  52712950 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagtaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcat 52713049  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  52713050 cttttccaatgtaaaattaaatgcaaattgc 52713080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 37788341 - 37788468
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  37788341 taaaatataagcaaaaaaatatcattttctttatctcaaaatataagtaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatctt 37788440  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||| ||||    
T  37788441 ttccaatgtaaaattaaatgcaacttgc 37788468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 29899602 - 29899732
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| |||||||||| ||||| |||| ||||||| |||||||||||||||||||| |||||  |||||||||||||||||||||    
T  29899602 tcctaaaatataagcaaaaaaatctcattttgtttgtttcaacatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcat 29899701  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  29899702 cttttccaatgtaaaattaaatgcaagttgc 29899732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 32012560 - 32012430
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||  |||||||||||||||||||||||    
T  32012560 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcat 32012461  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||| |||||||||||||||||||| ||||    
T  32012460 ctttttcaatgtaaaattaaatgcaaattgc 32012430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 38940756 - 38940886
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| || |||||||||||||||||||||||||| |||||| ||||||||||||| |||  |||||||||||||||||||||||    
T  38940756 tcctaaaatataagcaaaaatatttcattttctttgtctcaaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaatcat 38940855  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  38940856 cttttccaatgtaaaattaaatgcaaattgc 38940886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 53677710 - 53677582
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatct 100  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||  ||||||||||||||||||||||||    
T  53677710 ctaaaatataaataaaaaaatctcatattctttgtctcaaaatataagcaaaaaaaaccaacttttatgctattattatgttttttcaaacaaatcatct 53677611  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||| ||||    
T  53677610 tttccaatgtaaaattaaatgcaaattgc 53677582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 29180645 - 29180515
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||  ||||||||||||||| |||| ||    
T  29180645 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagacaaacttttatgttattattatgttttttcaaagaaattat 29180546  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  29180545 cttttccaatgtaaaattaaatgcaaattgc 29180515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 30776717 - 30776587
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| || |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||| ||    
T  30776717 tcctaaaatataagcaaaaaaatctcatattatttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaattat 30776618  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  30776617 cttttccaatgtaaaattaaatgcaaattgc 30776587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 30777374 - 30777504
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| || |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||| ||    
T  30777374 tcctaaaatataagcaaaaaaatctcatattatttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaattat 30777473  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  30777474 cttttccaatgtaaaattaaatgcaaattgc 30777504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 38187959 - 38187829
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||| ||  ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||  ||||| ||||||||||||||||    
T  38187959 tcctaaaatacaaacaaaaaaatctcattttctttatctcaaaatataagtaaaaaagatcaacttttatgctattagtatgtattttcaaacaaatcat 38187860  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  38187859 cttttccaatgtaaaattaaatgcaagttgc 38187829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 27750581 - 27750451
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| || ||||||||||| |||||||||||||| | || ||||||||||||||| |||||  ||||| |||||||||||||||    
T  27750581 tcctaaaatataagcaaaaaaatttcattttctttatctcaaaatataagcataacagaccaacttttatgctatttttatgttatttcaaacaaatcat 27750482  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  27750481 cttttccaatgtaaaattaaatgcaagttgc 27750451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 39970222 - 39970092
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||| || ||||||| |||  |||||||||||||| ||||||||    
T  39970222 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagactaatttttatgctattattatgttttttcaaccaaatcat 39970123  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  39970122 cttttccaatgtaaaattaaatgcaaattgc 39970092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 1619916 - 1620046
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||  | |||| ||||||||||||| |||  |||| ||||||||||||||||||    
T  1619916 tcctaaaatataagtaaaaaaatctcatattctttgtctcaaaatataatcataaaacaccaacttttatgctattattatattttttcaaacaaatcat 1620015  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||| |||||||||||||||||||| ||||    
T  1620016 ctttttcaatgtaaaattaaatgcaatttgc 1620046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 3043400 - 3043270
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| |||||  | |||| |||||||||||||||||||||  ||||||| ||||||||||| ||||  ||||||||||||||||||||||    
T  3043400 tcctaaaatataagcaaaaaattatcatattctttgtctcaaaatataagcgaaaaagatcaacttttatgctattattatgttttttcaaacaaatcat 3043301  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  3043300 cttttccaatgtaaaattaaatgcaaattgc 3043270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 10591735 - 10591606
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| || |||||||||||||||||| ||||||||| || ||||||| ||||  ||||||||||||||||||||||    
T  10591735 tcctaaaatataagcaaaaaaatctcatattttttgtctcaaaatataag-aaaaaagactaatttttatgctattattatgttttttcaaacaaatcat 10591637  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  10591636 cttttccaatgtaaaattaaatgcaaattgc 10591606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 43980386 - 43980515
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| |||||  |||||| |||||||||| ||||||||||||||||| ||||||||||||| ||||  ||| ||||||||||||||||||    
T  43980386 tcctaaaatataagaaaaaat-tctcatattctttgtcttaaaatataagtaaaaaataccaacttttatgctattattatattttttcaaacaaatcat 43980484  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  43980485 cttttccaatgtaaaattaaatgcaaattgc 43980515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 9798308 - 9798183
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| |||||  |||||| |||||| ||| |||||||||| |||||||| ||||||||||| ||||  ||||||||||||||||||||||    
T  9798308 tcctaaaatataagcaaaaaattctcatattctttatcttaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcat 9798209  T
Q  99 cttttccaatgtaaaattaaatgcaa 124  Q
    ||||||||||||||||||||||||||    
T  9798208 cttttccaatgtaaaattaaatgcaa 9798183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 49901917 - 49902044
Alignment:
Q  5 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaa-cttttatgttatt--tatgttttttcaaacaaatcatctt 101  Q
    |||||||||| ||||| ||||||| ||||||||||||||||||||| |||||| | ||| |||||||||||||  |||||||||||||||||||||||||    
T  49901917 aaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaaaaacaaacttttatgttattattatgttttttcaaacaaatcatctt 49902016  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||| ||||||||||||||| ||||    
T  49902017 ttccaatataaaattaaatgcaaattgc 49902044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 51495079 - 51495166
Alignment:
Q  41 aaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||| |||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  51495079 aaaatataagcaaaaaagatcaacttttatgctatt-atgtttttttaaacaaatcatcttttccaatgtaaaattaaatgcaaattgc 51495166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 5222529 - 5222396
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgtttttt-----caaacaaat 95  Q
    ||||| |||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||  |||  |||||||||||      ||| ||||    
T  5222529 ctaaattataagtaaaaaaatctcattttctttgtcctaaaatataagtaaaaaagaccaacttttatactattattatgtttttttaaaaaaaaaaaat 5222430  T
Q  96 catcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||| |||||||| |||||||||||||||| ||||    
T  5222429 cattttttccaaagtaaaattaaatgcaaattgc 5222396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 23978376 - 23978250
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatc 96  Q
    ||||||| |||||| ||||| | |||||||||||| || |||| ||||||  ||||||||||||||||||     ||| ||||||||||||||| ||||     
T  23978376 tcctaaattataagcaaaaaaaactcattttctttatcccaaattataagcgaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaatt 23978278  T
Q  97 atcttttccaatgtaaaattaaatgcaa 124  Q
    ||||||||||| | ||||||||||||||    
T  23978277 atcttttccaaagaaaaattaaatgcaa 23978250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 129
Target Start/End: Complemental strand, 30012178 - 30012055
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgtttttt--caaacaaatcatcttttc 104  Q
    |||||| ||||| ||| ||||||||||||| ||||||||||| |||||||| ||||||||||  |||  |||||||||||   ||| |||||||| ||||    
T  30012178 tataagcaaaaaaatcacattttctttgtcccaaaatataagcaaaaaagatcaacttttattctattattatgttttttaaaaaaaaaatcatc-tttc 30012080  T
Q  105 caatgtaaaattaaatgcaagttgc 129  Q
    ||| |||||||||||||||| ||||    
T  30012079 caaagtaaaattaaatgcaaattgc 30012055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 29180454 - 29180409
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29180454 catctttctatgaaacttattccaaggagaacacaaaaaattatac 29180409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 47807159 - 47807212
Alignment:
Q  76 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  47807159 ttatgttttttcaaagaaatcatcttttccaatgtaaaattaaatgcaaattgc 47807212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 8013327 - 8013219
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 119  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||     ||| |||| |||||||||| |||| |||||||||||   |||||||||    
T  8013327 ctcattttctttgtcccaaattataagtaaaaaagaccaacttttatcatatttaattatattttttcaaa-aaattatcttttccaagtaaaaattaaa 8013229  T
Q  120 tgcaagttgc 129  Q
    ||||| ||||    
T  8013228 tgcaatttgc 8013219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 39078035 - 39078098
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  39078035 aatataagcaaaaaaaactcattttctttgtcccaaaatataagtaaaaaagacaaacttttat 39078098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 48793901 - 48793797
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatcatctt 101  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||| | ||||||| |||||||||  ||||||    ||||||||  || ||||||||||    
T  48793901 aaatataagtaaaaaaaactcattttctttgtcccaaaatataagcataaaagacaaacttttattctatttaatcttgtttttt--aaaaaatcatctt 48793804  T
Q  102 ttccaat 108  Q
    |||||||    
T  48793803 ttccaat 48793797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 10591545 - 10591500
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  10591545 catctttccatgaaacttattccaaggagaacacaaaaaattatac 10591500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 17187062 - 17186993
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||| |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  17187062 tcctataatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 17186993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 30776526 - 30776481
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  30776526 catctttccatgaaacttattccaaggagaacacaaaaaattatac 30776481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 37788529 - 37788574
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  37788529 catctttccatgaaacttattccaaggagaacacaaaaaattatac 37788574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 39970031 - 39969986
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  39970031 catctttccatgaaacttattccaaggagaacacaaaaaattatac 39969986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 47806787 - 47806860
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt 76  Q
    |||||||||||||||||| |  |||| ||||||||||||||||||||| |||||||| ||| ||||||| ||||    
T  47806787 ctaaaatataagtaaaaaaaattcatattctttgtctcaaaatataagcaaaaaagatcaatttttatgctatt 47806860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 53677521 - 53677476
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  53677521 catctttctatgaaactcattccaaggagaacacaaaaaattatac 53677476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 16605109 - 16605038
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 78  Q
    ||||||||  |||| | ||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||    
T  16605109 aatataagctaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatgctattta 16605038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 37911798 - 37911901
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 119  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||||     ||| ||||||||||||||| | || ||||||||||| | |||||||||    
T  37911798 ctcattttctttgtcccaaattataagtaaaaaagactaaattttatcatatttaattatgttttttcaaa-atattatcttttccaaaggaaaattaaa 37911896  T
Q  120 tgcaa 124  Q
    |||||    
T  37911897 tgcaa 37911901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 53848366 - 53848484
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttc 104  Q
    |||||| ||||| | ||||| ||||||||| |||| ||||||||||||||||||||||||||     ||| |||| || ||||||| ||||||||||||     
T  53848366 tataagaaaaaaaaactcatcttctttgtcccaaattataagtaaaaaagaccaacttttatcaaatttaattatattgtttcaaa-aaatcatcttttt 53848464  T
Q  105 caatgtaaaattaaatgcaa 124  Q
    ||| | |||| |||||||||    
T  53848465 caaagaaaaaataaatgcaa 53848484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8178499 - 8178431
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||| |||||| ||||| |  ||||||||||||||||||| |||||| |||||||||||||||||||    
T  8178499 tcctaaattataaggaaaaaaaattcattttctttgtctcaaattataag-aaaaaagaccaacttttat 8178431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 29899793 - 29899838
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| || ||||||||||||||||||||||||||||||||||    
T  29899793 catctttccataaaacttattccaaggagaacacaaaaaattatac 29899838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 30777565 - 30777610
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  30777565 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 30777610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 35311018 - 35310913
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatcatctt 101  Q
    ||||||||| |||||   |||||||||||||||| |||||||||| ||||||||| |||||||||  ||||||    |||||||| ||| ||||||||||    
T  35311018 aaatataagcaaaaaatactcattttctttgtcttaaaatataagcaaaaaagacaaacttttattatatttaatcttgtttttt-aaaaaaatcatctt 35310920  T
Q  102 ttccaat 108  Q
    || ||||    
T  35310919 tttcaat 35310913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 38940947 - 38940992
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  38940947 catcttttaatgaaacttattccaaggagaacacaaaaaattatac 38940992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 47516427 - 47516330
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 120  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||     ||| ||||||| ||||||| |||| ||||||||||| | ||||||||||    
T  47516427 cattttctttgtcccaaattataagcaaaaaagaccaacttttattacatttaattatgttgtttcaaa-aaattatcttttccaaaggaaaattaaat 47516330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 47807273 - 47807318
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  47807273 catctttccatgaaacttattccaaagagaacacaaaaaattatac 47807318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 3043209 - 3043153
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatacttcatctcact 246  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||| ||| ||||||    
T  3043209 catctttccatgaaacttatttcaaggagtacacaaaaaattatacctcaactcact 3043153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 41414833 - 41414789
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  41414833 cattttctttgtcccaaaatataagtaaaaaagacaaacttttat 41414789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 42915406 - 42915470
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||| ||||| | || |||||||||||| ||||||||||| ||||||||| |||||||||    
T  42915406 aaatataagcaaaaaaaactaattttctttgtcccaaaatataagcaaaaaagacaaacttttat 42915470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 50768523 - 50768567
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattata 234  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||    
T  50768523 catctttccatgaaacttattccaaggaaaacacaaaaaattata 50768567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 14332668 - 14332731
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  14332668 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 14332731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 9798117 - 9798072
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| |||||||||| |||||||||||||    
T  9798117 catctttccatgaaacttatttcaaggagaacgcaaaaaattatac 9798072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 17236334 - 17236293
Alignment:
Q  194 tttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  17236334 tttctatgaaacttatttcaagaagaacacaaaaaattatac 17236293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 28681737 - 28681782
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| || |||||||||| |||||||||||||||||||||||    
T  28681737 catctttccataaaacttattctaaggagaacacaaaaaattatac 28681782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 35529551 - 35529612
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  35529551 tataagcaaaaaaaacgcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 35529612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 52713137 - 52713182
Alignment:
Q  194 tttctatgaaacttattccaaggagaacacaaaaaattatacttca 239  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||    
T  52713137 tttccatgaaacttattccaagaaaaacacaaaaaattatacttca 52713182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 55580562 - 55580607
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaactttta 69  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  55580562 ctcattttctttgtcccaaaatataagcaaaaaagacaaactttta 55580607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 2229175 - 2229219
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  2229175 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 2229219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 26916253 - 26916297
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||    
T  26916253 cattttctttgtctcaaaatataagcaaaaaagataaacttttat 26916297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 28318655 - 28318555
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 119  Q
    ||||||||||||||| |||| | |||| |||||| || |||||||||     ||| ||||||||||||||| |||| ||||||||||| | |||||||||    
T  28318655 ctcattttctttgtcccaaattgtaagcaaaaaaaactaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaa 28318557  T
Q  120 tg 121  Q
    ||    
T  28318556 tg 28318555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 5842016 - 5841971
Alignment:
Q  25 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||||| ||| |||||||||||||||  |||||||||    
T  5842016 tcattttctttgtctaaaattataagtaaaaaagattaacttttat 5841971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 30011996 - 30011951
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||||||  | |||||||||||||||||    
T  30011996 catctttccatgaaacttattccaaaaataacacaaaaaattatac 30011951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 32012369 - 32012324
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||| |  |||||||||||||||||||||||    
T  32012369 catctttccatgaaacttaatttaaggagaacacaaaaaattatac 32012324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 43980576 - 43980621
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||  |||||||||||| ||||||||||||||||| ||||||    
T  43980576 catcttttcatgaaacttatttcaaggagaacacaaaaatttatac 43980621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 49902105 - 49902154
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 239  Q
    |||||||  ||||||||||||||||  |||||| ||||||||||||||||    
T  49902105 catcttttcatgaaacttattccaactagaacataaaaaattatacttca 49902154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 55937741 - 55937700
Alignment:
Q  194 tttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||| |||||||||||| ||||||||||||||||| ||||||    
T  55937741 tttccatgaaacttatttcaaggagaacacaaaaacttatac 55937700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 5222327 - 5222291
Alignment:
Q  198 tatgaaacttattccaaggagaacacaaaaaattata 234  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  5222327 tatgaaacttatttcaagaagaacacaaaaaattata 5222291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 24940281 - 24940313
Alignment:
Q  25 tcattttctttgtctcaaaatataagtaaaaaa 57  Q
    ||||||||||||||||||||| |||||||||||    
T  24940281 tcattttctttgtctcaaaatgtaagtaaaaaa 24940313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 28142860 - 28142756
Alignment:
Q  24 ctcattttctttgtctcaaaatataag-taaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaa 118  Q
    ||||||||||||||  |||| ||||||  |||||| | ||||||||||     ||| ||||||||||||||| |||| ||||||||||| | ||||||||    
T  28142860 ctcattttctttgttccaaattataagcaaaaaaaaatcaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaa 28142762  T
Q  119 atgcaa 124  Q
    ||||||    
T  28142761 atgcaa 28142756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 47867807 - 47867851
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||| ||||||||||| ||||||||  |||||||||    
T  47867807 cattttctttgtcccaaaatataagcaaaaaagaaaaacttttat 47867851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 1e-49; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 24612748 - 24612618
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||||||||    
T  24612748 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcat 24612649  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||| |||||||||||||||||||||||||    
T  24612648 ctttttcaatgtaaaattaaatgcaagttgc 24612618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 25321854 - 25321724
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  25321854 tcctaaaatataagcaaaaaaatcttattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcat 25321755  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  25321754 cttttccaatgtaaaattaaatgcaagttgc 25321724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 11043950 - 11044080
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||| |||||||    
T  11043950 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaataaatcat 11044049  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
     ||||||||||||||||||||||||||||||    
T  11044050 attttccaatgtaaaattaaatgcaagttgc 11044080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 27752479 - 27752609
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| || |||||||||||||||||||||||||  |||||||||||||||||||| |||||  |||||||||||||||||||||    
T  27752479 tcctaaaatataagcaaaaaaatatcattttctttgtctcaaaatataaacaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcat 27752578  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  27752579 cttttccaatgtaaaattaaatgcaagttgc 27752609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 33851291 - 33851161
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||| ||||||||||| |||||  |||||||||||||||||||||    
T  33851291 tcctaaaatataagcaaaaaaatctcattttctttgcctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcat 33851192  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  33851191 cttttccaatgtaaaattaaatgcaagttgc 33851161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 36537951 - 36538081
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||||||||||||||||    
T  36537951 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagacaaacttttatgctatttttatgttttttcaaacaaatcat 36538050  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  36538051 cttttccaatgtaaaattaaatgcaatttgc 36538081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 35259950 - 35260075
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||||||||    
T  35259950 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcat 35260049  T
Q  99 cttttccaatgtaaaattaaatgcaa 124  Q
    ||||||||||||||||||||||||||    
T  35260050 cttttccaatgtaaaattaaatgcaa 35260075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 32678774 - 32678647
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| || ||||||||||||| | |||||||||| ||||||||  |||||||||||||||  |||||||||||||||||||||||||    
T  32678774 taaaatataagcaaaaaaatatcattttctttgttttaaaatataagcaaaaaagataaacttttatgttattattatgttttttcaaacaaatcatctt 32678675  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||||||||    
T  32678674 ttccaatgtaaaattaaatgcaagttgc 32678647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 44052513 - 44052644
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatca 97  Q
    |||||| ||||||| ||||| |||||||||||||| |||||||||||||| |||||| |||||||||||||||||  ||||| |||||||||||||||||    
T  44052513 tcctaagatataagcaaaaaaatctcattttctttatctcaaaatataagcaaaaaaaaccaacttttatgttattattatgtttttttcaaacaaatca 44052612  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||||||| ||||    
T  44052613 tcttttccaatgtaaaattaaatgcaaattgc 44052644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 27621027 - 27621153
Alignment:
Q  5 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttt 102  Q
    |||||||||| ||||| ||||||| ||||||||||||| ||||||| ||||||||| |||||||||| ||||  ||||||||||||||||||||||||||    
T  27621027 aaaatataagcaaaaaaatctcatattctttgtctcaatatataagcaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatcttt 27621126  T
Q  103 tccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||| ||||    
T  27621127 tccaatgtaaaattaaatgcaaattgc 27621153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 37597963 - 37598093
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||   |||||| ||||||||||||||||||||| |||||||||||||||||||||| |  |||||||||||||||||||||||    
T  37597963 tcctaaaatataagcaaaacattctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttgttattatgttttttcaaacaaatcat 37598062  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
     ||||||||||||||||||||||||| ||||    
T  37598063 tttttccaatgtaaaattaaatgcaaattgc 37598093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 3099848 - 3099976
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatcatct 100  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||| | |||||||| |||  ||||| ||||||||||||||||||||    
T  3099848 taaaatataagcaaaaaaatctcattttctttgtttcaaaatataagcaaaaaagacaatcttttatgctattattatgtttttttcaaacaaatcatct 3099947  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||| ||||    
T  3099948 tttccaatgtaaaattaaatgcaaattgc 3099976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 35346569 - 35346442
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| |||||  |||||| |||||||||||||||||||| ||||||||| ||||||||||| |||  ||||||||||||||||||||||||||    
T  35346569 taaaatataagcaaaaaattctcatattctttgtctcaaaatataaataaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatctt 35346470  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    || |||||||||||| ||||||| ||||    
T  35346469 tttcaatgtaaaattgaatgcaaattgc 35346442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 35344259 - 35344390
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatca- 97  Q
    |||||||||||||| |||||  |||||| ||||||||||||||||||||| |||||||||||| ||||||| |||  ||||||||||||||||||||||     
T  35344259 tcctaaaatataagcaaaaatttctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcat 35344358  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    | |||| |||||||||||||||||||| ||||    
T  35344359 tttttttcaatgtaaaattaaatgcaaattgc 35344390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 11992620 - 11992751
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgtttt-ttcaaacaaatca 97  Q
    |||||||||||||| ||||| || |||| |||||||| | |||||||||| |||||| ||| ||||||||| ||||  |||||||| |||||||||||||    
T  11992620 tcctaaaatataagcaaaaaaatttcatattctttgtattaaaatataagcaaaaaaaacctacttttatgctattattatgtttttttcaaacaaatca 11992719  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||||||| ||||    
T  11992720 tcttttccaatgtaaaattaaatgcaaattgc 11992751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 44411478 - 44411347
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaa-gaccaacttttatgttatt--tatgttttttcaaacaaatca 97  Q
    ||||||||||||||  ||||  |||||| |||||| |||||||||||||| |||||| |||||||||||||| ||||  ||| |||||||||||||||||    
T  44411478 tcctaaaatataagctaaaaattctcatattctttttctcaaaatataagcaaaaaaagaccaacttttatgctattattatattttttcaaacaaatca 44411379  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||| |||||||||||||||||||| ||||    
T  44411378 tctttttcaatgtaaaattaaatgcaaattgc 44411347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 39187129 - 39187256
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaa-cttttatgttatt--tatgttttttcaaacaaatcatc 99  Q
    |||||||||||| ||||| ||||||| ||||  ||||||||||||||| |||||| | ||| |||||||| ||||  |||||||||||||||||||||||    
T  39187129 ctaaaatataagcaaaaaaatctcatattct--gtctcaaaatataagcaaaaaaaaacaaacttttatgctattattatgttttttcaaacaaatcatc 39187226  T
Q  100 ttttccaatgtaaaattaaatgcaagttgc 129  Q
     |||||||||||||||||||||||| ||||    
T  39187227 atttccaatgtaaaattaaatgcaaattgc 39187256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 44358716 - 44358629
Alignment:
Q  44 atataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||| |||||||| ||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44358716 atataagcaaaaaagatcaacttttatgttattattacgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgc 44358629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 17713116 - 17713240
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcat 98  Q
    ||||| |||||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||     ||| |||| || |||| ||||||| ||    
T  17713116 ctaaattataagtaaaaaaaactcattttctttgtcccaaattataagtaaaaaagaccaacttttatcatatttaattatattgtttc-aacaaattat 17713214  T
Q  99 cttttccaatgtaaaattaaatgcaa 124  Q
    ||||||||| | ||||||||||||||    
T  17713215 cttttccaaaggaaaattaaatgcaa 17713240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 37567648 - 37567569
Alignment:
Q  52 aaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||| ||||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  37567648 aaaaaataccaacttttatgctattattatgttttttcagacaaatcatcttttccaatgtaaaattaaatgcaaattgc 37567569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 24510944 - 24510876
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt 77  Q
    |||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  24510944 tataagcaaaaaaatctcattttctttgtcccaaaatataagttaaaaagaccaatttttatgttattt 24510876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 31133219 - 31133167
Alignment:
Q  77 tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31133219 tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgc 31133167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 31133847 - 31133765
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgtttttt 86  Q
    ||||||||| ||||| || |||| ||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||||    
T  31133847 aaatataagcaaaaaaatttcatattctttgtctcaaaatataagaaaaaaagaccaacttttatgctattgttatgtttttt 31133765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 16635489 - 16635585
Alignment:
Q  22 atctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgtttt-ttcaaacaaatcatcttttccaatgtaaaatt 116  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||  |||||||| |||||| ||||||||||||| || ||||||||    
T  16635489 atctcattttctttgtcctaaaatataagtaagaaagaccaacttttatgctattactatgttttcttcaaa-aaatcatcttttcaaaagtaaaatt 16635585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 40487939 - 40487803
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaa---------cttttatgttatt--tatgttttttcaaac 91  Q
    |||||||||||| ||||| ||||||||||||| ||||||||||||||| |||||| |  ||         ||||| || ||||  ||||||||| |||||    
T  40487939 ctaaaatataagcaaaaaaatctcattttcttcgtctcaaaatataagcaaaaaaaaaaaatcaacttgacttttttgctattattatgttttt-caaac 40487841  T
Q  92 aaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  40487840 aaatcatcttttccaatgtaaaattcaatgcaagttgc 40487803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 12108069 - 12108192
Alignment:
Q  8 atataagtaaaaacatctcattttctttgtctcaaaatataag-taaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatcttttc 104  Q
    ||||||| ||||| ||||||| || ||| ||||||||||||||  |||||| |||||||||||||  ||  |||| |||||||||||||||||| ||||     
T  12108069 atataagcaaaaaaatctcatattttttatctcaaaatataagcaaaaaaaaaccaacttttatgccattattatattttttcaaacaaatcat-ttttt 12108167  T
Q  105 caatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||| ||||||| ||||    
T  12108168 caatgtaaaattcaatgcaaattgc 12108192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 2238835 - 2238736
Alignment:
Q  16 aaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatcttttccaatgtaaaat 115  Q
    ||||| |||||||||||||||||  |||||||||| ||||||||||||||| | |||||         ||||||| |||||||||||||||| |||||||    
T  2238835 aaaaaaatctcattttctttgtcctaaaatataagcaaaaaagaccaacttctgtgtta---------tttcaaaaaaatcatcttttccaaagtaaaat 2238745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 35525475 - 35525539
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  35525475 aaatataaggaaaaaaaactcattttctttgtcccaaaatataagtaaaaaagacaaacttttat 35525539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 5217283 - 5217414
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatc 96  Q
    ||||||| |||||| ||||| | ||||||||||||||  |||| |||||| |||||||||||||||||||     ||| ||||||||||||||| | |||    
T  5217283 tcctaaactataagcaaaaaaaactcattttctttgtaccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-acatc 5217381  T
Q  97 atcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||| |||| |  ||||||||||||| ||||    
T  5217382 atctttcccaaggagaaattaaatgcaatttgc 5217414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 34890456 - 34890385
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 78  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  34890456 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttattta 34890385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 8673298 - 8673398
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttat--gttttttcaaacaaatcatcttttccaatgtaaaattaaatgca 123  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||  ||||| |  || |||| ||| |||| ||||||||||| | |||||||||||||    
T  8673298 cattttctttgtcccaaattataagcaaaaaagaccaacttttatcatattttttagtgtttttaaaaaaattatcttttccaaaggaaaattaaatgca 8673397  T
Q  124 a 124  Q
    |    
T  8673398 a 8673398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 27621214 - 27621263
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 239  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  27621214 catctttccatgaaacttattccaagtagaacacaaaaaattatacttca 27621263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 27752670 - 27752715
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  27752670 catctttccatgaaacttattccaaggagaacacaaaaaattatac 27752715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 4047180 - 4047113
Alignment:
Q  4 taaaatata-agtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||| |||||||| | ||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  4047180 taaaatatagagtaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 4047113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 16635353 - 16635419
Alignment:
Q  22 atctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgtttttt 86  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||  ||||||||||    
T  16635353 atctcattttctttgtcctaaaatataagtaagaaagaccaacttttatgctattactatgtttttt 16635419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 13144226 - 13144180
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  13144226 ctcattttctttgtctcaaaatataagcaaaaaagacaaacttttat 13144180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 3100037 - 3100082
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  3100037 catctttccatgaaacttattccaacgagaacacaaaaaattatac 3100082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 11044141 - 11044186
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  11044141 catctttacatgaaacttattccaaggagaacacaaaaaattatac 11044186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 11992812 - 11992857
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  11992812 catcttttcatgaaacttattccaaggagaacacaaaaaattatac 11992857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 26954636 - 26954535
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt----tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatg 121  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||  ||||    |||||| ||||||| |||| |||||||||||   |||||||||||    
T  26954636 cattttctttgtcccaaattataagtaaaaaagaccaaattttatcatattttactatgttgtttcaaa-aaattatcttttccaaaagaaaattaaatg 26954538  T
Q  122 caa 124  Q
    |||    
T  26954537 caa 26954535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 31133106 - 31133061
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||    
T  31133106 catctttccatgaaatttattccaaggagaacacaaaaaattatac 31133061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 35260141 - 35260186
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  35260141 catctttccatgaaacttattccaaggagaacacaaaaaatgatac 35260186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 35344451 - 35344496
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  35344451 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 35344496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 37567508 - 37567463
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  37567508 catctttccatgaaacttattccaaagagaacacaaaaaattatac 37567463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 37598153 - 37598198
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  37598153 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 37598198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 41426423 - 41426468
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||    
T  41426423 catctttccatgaaacttattccaagaagaacacaaaaaattatac 41426468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 44411286 - 44411237
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 239  Q
    |||||||| |||||||||||| ||||||||| ||||||||||||||||||    
T  44411286 catctttccatgaaacttatttcaaggagaatacaaaaaattatacttca 44411237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 34713511 - 34713551
Alignment:
Q  89 aacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  34713511 aacaaatcatcttttccaatgtaaaattaaatgcaaattgc 34713551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 7858437 - 7858500
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  7858437 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 7858500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 16635621 - 16635687
Alignment:
Q  22 atctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgtttttt 86  Q
    |||||||||| ||||||  ||||||||||||| ||||||||||||||||| ||||  ||||||||||    
T  16635621 atctcattttatttgtcctaaaatataagtaagaaagaccaacttttatgctattactatgtttttt 16635687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 24892716 - 24892779
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | ||||||||||||||  ||||||||||| ||||||||| |||||||||    
T  24892716 aatataaggaaaaaaaactcattttctttgttccaaaatataagcaaaaaagacaaacttttat 24892779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 32678586 - 32678543
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattat 233  Q
    |||||||| ||||||||||||||||| |||||||||||||||||    
T  32678586 catctttccatgaaacttattccaagaagaacacaaaaaattat 32678543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 33851100 - 33851057
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattat 233  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  33851100 catctttccatgaaacttattccaaagagaacacaaaaaattat 33851057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 24612557 - 24612512
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||| ||| |||||||||||||||||||||||| ||||||||||||    
T  24612557 catcattccatgaaacttattccaaggagaacataaaaaattatac 24612512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 25321663 - 25321618
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| || ||||||||||||||||||||||| ||||||||||    
T  25321663 catctttccataaaacttattccaaggagaacacagaaaattatac 25321618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 35346381 - 35346336
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||||    
T  35346381 catctttccatgaaatttatttcaaggagaacacaaaaaattatac 35346336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 44052717 - 44052750
Alignment:
Q  202 aaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||||||||||||||||||||||||||||||||    
T  44052717 aaacttattccaaggagaacacaaaaaattatac 44052750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 7022635 - 7022591
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  7022635 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 7022591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 16643188 - 16643267
Alignment:
Q  48 aagtaaaaaagaccaacttttatgttatt--tatgttttttc-aaacaaatcatcttttccaatgtaaaattaaatgcaa 124  Q
    |||||| ||||| |||||||||| |||||  ||||||||||  ||||||||||||||||| || ||||||| ||||||||    
T  16643188 aagtaagaaagatcaacttttatcttattattatgttttttttaaacaaatcatcttttcaaaagtaaaataaaatgcaa 16643267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 41809090 - 41809022
Alignment:
Q  3 ctaaaatataagtaaaaacat-ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||| ||||| |  || ||||| |||||||||||||||||| ||||||||| |||||||||    
T  41809090 ctaaaatataagcaaaaaaaaacttattttttttgtctcaaaatataagcaaaaaagacaaacttttat 41809022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 8711754 - 8711817
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| |  ||||||| ||||||||||||||||| |||||||||| || ||||||    
T  8711754 aatataagcaaaaaaaattcattttatttgtctcaaaatataaataaaaaagacaaatttttat 8711817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 38072114 - 38072157
Alignment:
Q  27 attttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||| |||| |||||| |||||||||||||||||||    
T  38072114 attttctttgtcccaaattataagcaaaaaagaccaacttttat 38072157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 13143659 - 13143705
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||||| ||||||||||| ||||||||  |||||||||    
T  13143659 ctcattttctttgtcccaaaatataagcaaaaaagataaacttttat 13143705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 36190666 - 36190712
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||||| ||||||||||| |||||||||  ||||||||    
T  36190666 ctcattttctttgtcccaaaatataagcaaaaaagacacacttttat 36190712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 41362888 - 41362846
Alignment:
Q  27 attttctttgtctcaaaatataagtaaaaaagaccaactttta 69  Q
    |||||||||||| |||| |||||| ||||||||||||||||||    
T  41362888 attttctttgtcccaaattataagcaaaaaagaccaactttta 41362846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 13143847 - 13143896
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 239  Q
    |||||| ||||||||||| || ||| || |||||||||||||||||||||    
T  13143847 catcttcctatgaaacttttttcaacgaaaacacaaaaaattatacttca 13143896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 15824714 - 15824665
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 239  Q
    |||||||| ||||||||||||| || || ||||||||||| |||||||||    
T  15824714 catctttccatgaaacttattctaaagaaaacacaaaaaactatacttca 15824665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 29920345 - 29920296
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 239  Q
    |||||| | |||||||||||||||| || ||||||||||||| |||||||    
T  29920345 catcttcccatgaaacttattccaaagataacacaaaaaattgtacttca 29920296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 40486569 - 40486524
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||||||  |||||||||||| |||||||| ||||||||||||||    
T  40486569 catctttccttgaaacttattctaaggagaatacaaaaaattatac 40486524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 41426190 - 41426231
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataag 50  Q
    |||||| ||||| ||||||||||||||||| |||||||||||    
T  41426190 tataagcaaaaaaatctcattttctttgtcccaaaatataag 41426231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 44358556 - 44358523
Alignment:
Q  202 aaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||||| |||||||||||||||||||||||    
T  44358556 aaacttattctaaggagaacacaaaaaattatac 44358523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 12108248 - 12108288
Alignment:
Q  199 atgaaacttattccaaggagaacacaaaaaattatacttca 239  Q
    |||||||||||| ||| || |||||||||||||||||||||    
T  12108248 atgaaacttatttcaaagataacacaaaaaattatacttca 12108288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 16635757 - 16635860
Alignment:
Q  22 atctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgtttt--ttcaaacaaatcatcttttccaatgt-aaaatt 116  Q
    ||||||||| |||||||  ||||||||||    ||||||||| ||||||| ||||  ||||||||  |||||| ||||||||||||| || || ||||||    
T  16635757 atctcatttcctttgtcctaaaatataag----aaagaccaatttttatgctattactatgttttctttcaaaaaaatcatcttttcaaaagtaaaaatt 16635852  T
Q  117 aaatgcaa 124  Q
    ||||||||    
T  16635853 aaatgcaa 16635860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 17314723 - 17314790
Alignment:
Q  2 cctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||| |||||| ||||| | ||||||||||||||  |||| |||||| |||||||| ||||||||||    
T  17314723 cctaaattataaggaaaaaaa-ctcattttctttgttccaaattataagcaaaaaagatcaacttttat 17314790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 41362497 - 41362450
Alignment:
Q  76 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 124  Q
    ||||||||||||||| |||| ||||||||||| | ||||||||||||||    
T  41362497 ttatgttttttcaaa-aaattatcttttccaaaggaaaattaaatgcaa 41362450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 1e-49; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 36576307 - 36576437
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||  ||||||||||||||| |||||||    
T  36576307 tcctaaaatataaggaaaaaaatctcattttctttgtctcaaaatataagtaaaaaagacaaacttttatgctattattatgttttttcaaataaatcat 36576406  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  36576407 cttttccaatgtaaaattaaatgcaagttgc 36576437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 44600335 - 44600465
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  44600335 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaataaatcat 44600434  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||| ||||||||||||||||||||||    
T  44600435 cttttccagtgtaaaattaaatgcaagttgc 44600465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 43108131 - 43108000
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatca 97  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  43108131 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgtttttttcaaacaaatca 43108032  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||||||| ||||    
T  43108031 tcttttccaatgtaaaattaaatgcaaattgc 43108000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 32491331 - 32491202
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt-atgttttttcaaacaaatcatc 99  Q
    |||||||||||||| ||||| |||| ||||||||||||| |||||||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  32491331 tcctaaaatataagcaaaaaaatcttattttctttgtctgaaaatataagcaaaaaaaaccaacttttatgctattttatgttttttcaaacaaatcatc 32491232  T
Q  100 ttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||| ||||||||||||||||||||||||    
T  32491231 ttttcgaatgtaaaattaaatgcaagttgc 32491202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 23731451 - 23731579
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||  ||||||||||||||| |||||||| ||||||||||| |||||  |||||||||||||||||||||    
T  23731451 tcctaaaatataagaaaaaaaatctcattttct--gtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcat 23731548  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  23731549 cttttccaatgtaaaattaaatgcaagttgc 23731579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 35181081 - 35181211
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| |||||||||||| |||||||| |||||||||||||||||||| |||  |||||||||||||||||||||||    
T  35181081 tcctaaaatataagcaaaaaaatctcatattctttgtctcagaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcat 35181180  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||| |||||||||||||||||||| ||||    
T  35181181 ctttttcaatgtaaaattaaatgcaaattgc 35181211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 40560271 - 40560401
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||||  |||||||||| | ||||||| |||||  |||||||||||||||||||||    
T  40560271 tcctaaaatataagcaaaaaaatcttattttctttgtctcaaaatataatcaaaaaagacccatttttatgctatttttatgttttttcaaacaaatcat 40560370  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  40560371 cttttccaatgtaaaattaaatgcaagttgc 40560401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 41815918 - 41815788
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||  ||||||||||||||| |||||||    
T  41815918 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcat 41815819  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
     |||||||||||||||||||||| |||||||    
T  41815818 attttccaatgtaaaattaaatgtaagttgc 41815788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 45598793 - 45598923
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||| || ||||||| ||||  ||||||||||||||||||||||    
T  45598793 tcctaaaatataagcaaaaaaatctcatgttctttgtctcaaaatataagcaaaaaagactaatttttatgctattattatgttttttcaaacaaatcat 45598892  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  45598893 cttttccaatgtaaaattaaatgcaaattgc 45598923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 3157327 - 3157455
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatct 100  Q
    |||||||||||| ||||| || |||||||| ||||||||||||||||| ||||||||| |||||||||| ||||  ||||| ||||||||||||||||||    
T  3157327 ctaaaatataagcaaaaaaatttcattttccttgtctcaaaatataagcaaaaaagactaacttttatgctattattatgtattttcaaacaaatcatct 3157426  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||    
T  3157427 tttccaatgtaaaattaaatgcaagttgc 3157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 19933278 - 19933150
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatct 100  Q
    |||||||||||| ||||| || ||||||||||| |||||||||||||| ||||||||  |||||||||| |||||  |||||||||||||||||||||||    
T  19933278 ctaaaatataagcaaaaaaatttcattttctttatctcaaaatataagcaaaaaagataaacttttatgctatttttatgttttttcaaacaaatcatct 19933179  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||    
T  19933178 tttccaatgtaaaattaaatgcaagttgc 19933150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 19964417 - 19964289
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatct 100  Q
    |||||||||||| ||||| || ||||||||||| |||||||||||||| ||||||||  |||||||||| |||||  |||||||||||||||||||||||    
T  19964417 ctaaaatataagcaaaaaaatttcattttctttatctcaaaatataagcaaaaaagataaacttttatgctatttttatgttttttcaaacaaatcatct 19964318  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||    
T  19964317 tttccaatgtaaaattaaatgcaagttgc 19964289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 34808110 - 34808238
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatct 100  Q
    |||||||||||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  34808110 ctaaaatataagcaaaaaaatctcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatct 34808209  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    ||| ||| |||||||||||||||| ||||    
T  34808210 ttttcaacgtaaaattaaatgcaaattgc 34808238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 9818372 - 9818491
Alignment:
Q  4 taaaatataagtaaaaaca-tctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatcttt 102  Q
    ||||||||||| ||||| | ||||||||||||| |||||||||||||| |||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  9818372 taaaatataagcaaaaaaaatctcattttctttttctcaaaatataagcaaaaaagaccaacttttatgttattatttttttttcaaacaaatcatcttt 9818471  T
Q  103 tccaatgtaaaattaaatgc 122  Q
    ||||||||||||||||||||    
T  9818472 tccaatgtaaaattaaatgc 9818491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 10720297 - 10720416
Alignment:
Q  4 taaaatataagtaaaaaca-tctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatcttt 102  Q
    ||||||||||| ||||| | ||||||||||||| |||||||||||||| |||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  10720297 taaaatataagcaaaaaaaatctcattttctttttctcaaaatataagcaaaaaagaccaacttttatgttattatttttttttcaaacaaatcatcttt 10720396  T
Q  103 tccaatgtaaaattaaatgc 122  Q
    ||||||||||||||||||||    
T  10720397 tccaatgtaaaattaaatgc 10720416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 47383298 - 47383417
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| || ||| |||||||||||||||||||||| |||||| ||||||||||||| ||||  |||||||||||||||||||||||||    
T  47383298 taaaatataagcaaaaaaatatcactttctttgtctcaaaatataagcaaaaaataccaacttttatgatattattatgttttttcaaacaaatcatctt 47383397  T
Q  102 ttccaatgtaaaattaaatg 121  Q
    ||||||||||||||||||||    
T  47383398 ttccaatgtaaaattaaatg 47383417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 21654346 - 21654221
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| |||||||  |||||||||||||||||||  ||||| |||||||||||||| ||||  |||||||||||||||||||||     
T  21654346 tcctaaaatataagcaaaaaaatctcataatctttgtctcaaaatataaacaaaaaggaccaacttttatgctattattatgttttttcaaacaaatcac 21654247  T
Q  99 cttttccaatgtaaaattaaatgcaa 124  Q
    ||||||||||||||||||||||||||    
T  21654246 cttttccaatgtaaaattaaatgcaa 21654221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 23106341 - 23106472
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaa-gaccaacttttatgttatt--tatgttttttcaaacaaatca 97  Q
    |||||||||||||| ||||| ||| ||| || |||||||||||||||||| |||||| ||| |||||||||| ||||  |||||||||||||||||||||    
T  23106341 tcctaaaatataagcaaaaaaatcacatattatttgtctcaaaatataagcaaaaaaagactaacttttatgctattattatgttttttcaaacaaatca 23106440  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||||||| ||||    
T  23106441 tcttttccaatgtaaaattaaatgcaaattgc 23106472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 18206533 - 18206415
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatct 100  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||| |||||| |||| ||         ||||||||||||||||||||||||||    
T  18206533 tcctaaaatataagtaaaaaaatatcattttctttgtctcaaaatataagcaaaaaaaaccatct---------tttatgttttttcaaacaaatcatct 18206443  T
Q  101 tttccaatgtaaaattaaatgcaagttg 128  Q
    ||| ||||||||||||||||||||||||    
T  18206442 ttttcaatgtaaaattaaatgcaagttg 18206415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 42617560 - 42617690
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| |||||| |||||||||||||| ||||||||| |||| ||||| |||  |||||||||||||||||||| ||    
T  42617560 tcctaaaatataagcaaaaaaatctcatattctttttctcaaaatataagcaaaaaagacaaactcttatgatattattatgttttttcaaacaaattat 42617659  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
     |||| |||||||||||||||||||| ||||    
T  42617660 ttttttcaatgtaaaattaaatgcaaattgc 42617690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 48879298 - 48879407
Alignment:
Q  22 atctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 119  Q
    ||||||| || ||| ||| ||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||| |||||||||||||||    
T  48879298 atctcatattttttatcttaaaatataagtaaaaaagaccaacttttatgttattattatgttttttcaaaaaaatcatctttttcaatgtaaaattaaa 48879397  T
Q  120 tgcaagttgc 129  Q
    ||||| ||||    
T  48879398 tgcaaattgc 48879407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 41889063 - 41889190
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| || |||| ||||||||||||||||||||| |||||| | |||||||||||  |||  |||||||||||||||||||||||||    
T  41889063 taaaatataagcaaaaaaatatcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgccattattatgttttttcaaacaaatcatctt 41889162  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||| || |||| ||||    
T  41889163 ttccaatgtaaaattcaaagcaaattgc 41889190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 40583068 - 40583164
Alignment:
Q  35 tgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||| |||||| ||||||||||||||||||  |||||||||||||||||||||| |||| |||||||||||||||||||| ||||    
T  40583068 tgtctcaaaatataagcaaaaaataccaacttttatgttattattatgttttttcaaacaaatcatatttttcaatgtaaaattaaatgcaaattgc 40583164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 22111514 - 22111425
Alignment:
Q  42 aaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||| |||||| ||||||||||||||||||  |||||||||||||||||||||| |||| |||||||||||||||||||| ||||    
T  22111514 aaatataagcaaaaaataccaacttttatgttattattatgttttttcaaacaaatcatatttttcaatgtaaaattaaatgcaaattgc 22111425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 48938112 - 48937984
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatca 97  Q
    |||||||||||||||||||| || |||| |||||||||| |||||||||| ||||   | |||||||| || |||  ||||| |||||||||||||||||    
T  48938112 tcctaaaatataagtaaaaaaatttcatattctttgtcttaaaatataagcaaaa---atcaacttttgtgctattattatgtttttttcaaacaaatca 48938016  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||| ||| ||||    
T  48938015 tcttttccaatgtaaaattaaatacaaattgc 48937984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 48943138 - 48943010
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatca 97  Q
    |||||||||||||||||||| || |||| |||||||||| |||||||||| ||||   | |||||||| || |||  ||||| |||||||||||||||||    
T  48943138 tcctaaaatataagtaaaaaaatttcatattctttgtcttaaaatataagcaaaa---atcaacttttgtgctattattatgtttttttcaaacaaatca 48943042  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||| ||| ||||    
T  48943041 tcttttccaatgtaaaattaaatacaaattgc 48943010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 30082261 - 30082372
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatcttttccaat 108  Q
    |||||| ||||| ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||         ||||||| ||||||||||||||||     
T  30082261 tataagcaaaaaaatctcattttctttgtcccaaaatataagcaaaaaagaccaatttttatgtta---------tttcaaaaaaatcatcttttccaaa 30082351  T
Q  109 gtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||| ||||    
T  30082352 gtaaaattaaatgcaaattgc 30082372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7989517 - 7989425
Alignment:
Q  1 tcctaaaatataagtaaaaaca--tctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaa 89  Q
    |||||||||||||| ||||| |  ||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  7989517 tcctaaaatataagcaaaaaaaaatctcattttatttgtttcaaaatataagtaaaaaagaccaacttttatgttattattatgttttttcaa 7989425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 41890485 - 41890410
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt 76  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||| ||||||| ||||    
T  41890485 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctatt 41890410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 18800980 - 18800912
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt 77  Q
    |||||| ||||| ||||||||||||||||| ||||||||||| |||||||||  |||||||||||||||    
T  18800980 tataagaaaaaaaatctcattttctttgtcccaaaatataagcaaaaaagacatacttttatgttattt 18800912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 39348708 - 39348803
Alignment:
Q  31 tctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 124  Q
    |||||||  ||||||||||| |||||||||||||||||||| |||  || |||| ||||||| || | ||||||||||| ||||||||||||||||    
T  39348708 tctttgtaccaaaatataagcaaaaaagaccaacttttatgctattattgtgttgtttcaaaaaattaatcttttccaaagtaaaattaaatgcaa 39348803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 18206353 - 18206308
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  18206353 catctttccatgaaacttattccaaggagaacacaaaaaattatac 18206308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 35181272 - 35181317
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  35181272 catctttccatgaaacttattccaaggagaacacaaaaaattatac 35181317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 39337431 - 39337549
Alignment:
Q  16 aaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttc---aaacaaatcatcttttccaatgt 110  Q
    ||||| |||||| |||||||||| ||||||||||| |||||| ||||||||||||| |||  || |||| ||||   ||| ||||||||||||||||  |    
T  39337431 aaaaaaatctcagtttctttgtcccaaaatataagcaaaaaataccaacttttatgctattattgtgttgtttcaaaaaaaaaatcatcttttccaaatt 39337530  T
Q  111 aaaattaaatgcaagttgc 129  Q
    |||| ||||||||| ||||    
T  39337531 aaaactaaatgcaaattgc 39337549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 42617751 - 42617796
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  42617751 catctttccatgaaacttattccaaggagaacacaaaaaattatac 42617796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 43107939 - 43107894
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  43107939 catctttccatgaaacttattccaaggagaacacaaaaaattatac 43107894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 47778651 - 47778755
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt-atgtt-ttttcaaacaaatcatctttt 103  Q
    ||||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| || ||||||  ||||| || || |||| ||| ||||||||||||    
T  47778651 aaatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaatttttattctatttaatcttgtttttaaaaaaatcatctttt 47778750  T
Q  104 ccaat 108  Q
    |||||    
T  47778751 ccaat 47778755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 25944456 - 25944527
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 78  Q
    |||||||| ||||| |  |||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  25944456 aatataagcaaaaaaaattcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttattta 25944527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 7989342 - 7989297
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||    
T  7989342 catctttccatgaaatttattccaaggagaacacaaaaaattatac 7989297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 19933089 - 19933044
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  19933089 catctttccatgaaacttattccaaggagaacacaaaaaatcatac 19933044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 19964228 - 19964183
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  19964228 catctttccatgaaacttattccaaggagaacacaaaaaatcatac 19964183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 40560462 - 40560507
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  40560462 catctttctataaaacttatttcaaggagaacacaaaaaattatac 40560507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 41815727 - 41815682
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| || ||||||||||||||||||||||||||||||||||    
T  41815727 catctttccataaaacttattccaaggagaacacaaaaaattatac 41815682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 48879468 - 48879513
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  48879468 catctttctataaaacttattccaaggagaatacaaaaaattatac 48879513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 48937923 - 48937878
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| || ||||||||||||||||||||||||||||||||||    
T  48937923 catctttccataaaacttattccaaggagaacacaaaaaattatac 48937878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 21654155 - 21654115
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaat 230  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  21654155 catctttccatgaaacttattccaaggagaacacaaaaaat 21654115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 41890276 - 41890232
Alignment:
Q  191 atctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  41890276 atctttccatgaaacttatttcaaggagaacacaaaaaattatac 41890232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 16562659 - 16562722
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||||||||||||| || ||||||    
T  16562659 aatataagcaaaaaaaacacattttctttgtcccaaaatataagtaaaaaagacaaatttttat 16562722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 16603003 - 16602940
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||||||||||||| || ||||||    
T  16603003 aatataagcaaaaaaaacacattttctttgtcccaaaatataagtaaaaaagacaaatttttat 16602940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 18102440 - 18102503
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  18102440 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 18102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 33152941 - 33153058
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatctttt 103  Q
    |||| |||||| ||||| || ||||||||||| ||  |||||||||  ||||||||||||||||||   ||||||     ||||||| |||| |||||||    
T  33152941 taaattataagcaaaaaaatatcattttctttatccaaaaatataaacaaaaaagaccaactttta---tattta-----tttcaaaaaaattatctttt 33153032  T
Q  104 ccaatgtaaaattaaatgcaagttgc 129  Q
     ||| |||||||||||||||| ||||    
T  33153033 tcaaagtaaaattaaatgcaaattgc 33153058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 46760487 - 46760444
Alignment:
Q  27 attttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  46760487 attttctttgtcccaaaatataagtaaaaaagacaaacttttat 46760444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 47557977 - 47557930
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtt 73  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  47557977 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatgtt 47557930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 3157516 - 3157561
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| ||| ||||||||||||||||||||    
T  3157516 catctttccatgaaacttatttcaaagagaacacaaaaaattatac 3157561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 9818548 - 9818593
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| || ||||||||||||||||||||| ||||||||||||    
T  9818548 catctttccataaaacttattccaaggagaacataaaaaattatac 9818593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 10720473 - 10720518
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| || ||||||||||||||||||||| ||||||||||||    
T  10720473 catctttccataaaacttattccaaggagaacataaaaaattatac 10720518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 22369145 - 22369250
Alignment:
Q  27 attttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 122  Q
    ||||||||||| ||||| |||||| |||||| || |||||||||     ||| ||||||||||||||| ||||||||||||| || |  |||||||||||    
T  22369145 attttctttgtatcaaattataagaaaaaaaaactaacttttatcatatttaattatgttttttcaaa-aaatcatcttttcaaaggagaaattaaatgc 22369243  T
Q  123 aagttgc 129  Q
    || ||||    
T  22369244 aatttgc 22369250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 23106533 - 23106578
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||    
T  23106533 catctttccatgaaacttattttaaggagaacacaaaaaattatac 23106578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 23731640 - 23731685
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||    
T  23731640 catctctccatgaaacttattccaaggagaacacaaaaaatcatac 23731685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 29236242 - 29236205
Alignment:
Q  40 caaaatataagtaaaaaagaccaacttttatgttattt 77  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  29236242 caaaatataagcaaaaaagaccaacttttatgttattt 29236205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 32491141 - 32491096
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||    
T  32491141 catctttccatgaaacttattataaggagaacacaaaaaattatac 32491096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 34808299 - 34808344
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||||    
T  34808299 catctttccatgaaactttttccaagaagaacacaaaaaattatac 34808344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 41889251 - 41889296
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| ||||||||| ||||||||||||||    
T  41889251 catctttccatgaaacttatttcaaggagaatacaaaaaattatac 41889296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 41890391 - 41890342
Alignment:
Q  76 ttatgtttttt-caaacaaatcatcttttccaatgtaaaattaaatgcaa 124  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  41890391 ttatgtttttttcaaacaaatcatcttttttaatgtaaaattaaatgcaa 41890342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 44600526 - 44600571
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||    
T  44600526 catctttccttgaaacttattctaaggagaacacaaaaaattatac 44600571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 47383486 - 47383530
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattata 234  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||    
T  47383486 catctttccatgaaacttattttaaggagaacacaaaaaattata 47383530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 14805781 - 14805844
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| |||| |||| |||||||||    
T  14805781 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaacagacaaacttttat 14805844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 15252775 - 15252838
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| |||| |||| |||||||||    
T  15252775 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaacagacaaacttttat 15252838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 21761998 - 21761947
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagac 60  Q
    |||||| || || |||||||||| ||||||||||| ||||||||||||||||    
T  21761998 tataagcaataaaatctcattttttttgtctcaaattataagtaaaaaagac 21761947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 24151820 - 24151777
Alignment:
Q  27 attttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||| |||| |||||| |||||||||||||||||||    
T  24151820 attttctttgtcccaaattataagcaaaaaagaccaacttttat 24151777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 35069096 - 35069013
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt-atgtt-ttttcaaacaaatcatcttttccaa 107  Q
    |||||| |||||| ||||||||||||||||| ||| |||||||||  ||||| || || |||| ||| ||||||||||||||||    
T  35069096 cattttttttgtcccaaaatataagtaaaaatgacaaacttttatcctatttaatcttgttttaaaaaaaatcatcttttccaa 35069013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 39174181 - 39174224
Alignment:
Q  27 attttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||  ||||||||||||||||||||| |||||||||    
T  39174181 attttctttgttccaaaatataagtaaaaaagacaaacttttat 39174224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 6190925 - 6190975
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaa 57  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||    
T  6190925 aatataagcaaaaaaaactcattttctttgtcccaaaatataagaaaaaaa 6190975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 235
Target Start/End: Complemental strand, 22111348 - 22111319
Alignment:
Q  206 ttattccaaggagaacacaaaaaattatac 235  Q
    ||||||||||||||||||||||||||||||    
T  22111348 ttattccaaggagaacacaaaaaattatac 22111319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 29236098 - 29236057
Alignment:
Q  194 tttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||||||||||||||||  |||| ||||||||||||||    
T  29236098 tttctatgaaacttattccaaaaagaatacaaaaaattatac 29236057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 33153119 - 33153168
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatacttca 239  Q
    |||||||| || ||| ||||| |||| |||||||||||||||||||||||    
T  33153119 catctttccataaaatttatttcaagaagaacacaaaaaattatacttca 33153168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 35084249 - 35084196
Alignment:
Q  76 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||| |||| | |||||||| ||||||| |||||||||||||||| ||||    
T  35084249 ttatgtttcttcataaaaatcatcctttccaaagtaaaattaaatgcaaattgc 35084196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 35888210 - 35888110
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatg 121  Q
    |||||| |||||| |||| |||||| |||||||||||||||| ||     ||| ||||||||||||||| |||| ||||||||||| | ||||| |||||    
T  35888210 cattttatttgtcccaaattataag-aaaaaagaccaactttcatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaataaaatg 35888113  T
Q  122 caa 124  Q
    |||    
T  35888112 caa 35888110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 36576498 - 36576542
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||    
T  36576498 catctttccatgaaacttattctaaggagaa-acaaaaaattatac 36576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 235
Target Start/End: Original strand, 40583241 - 40583270
Alignment:
Q  206 ttattccaaggagaacacaaaaaattatac 235  Q
    ||||||||||||||||||||||||||||||    
T  40583241 ttattccaaggagaacacaaaaaattatac 40583270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 22631966 - 22632030
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||| ||||| | ||||||||||||||   |||||||||| ||||| ||| |||||||||    
T  22631966 aaatataagcaaaaaaaactcattttctttgttctaaaatataagcaaaaaggacaaacttttat 22632030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 35084135 - 35084091
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattata 234  Q
    ||||||| ||||||||||||| |||| ||||||||||||| ||||    
T  35084135 catctttttatgaaacttatttcaagaagaacacaaaaaactata 35084091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 38260231 - 38260335
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaactttt-atgttattta----tgttttttcaaacaaatcatcttttccaatgtaaaattaa 118  Q
    ||||||||||||||| |||| ||||||||||||| || ||||||| ||| ||||||    | || ||||||| |||| |||||||||||   ||||||||    
T  38260231 ctcattttctttgtcccaaattataagtaaaaaatacaaactttttatgatatttaattatattgtttcaaa-aaattatcttttccaaatgaaaattaa 38260329  T
Q  119 atgcaa 124  Q
    ||||||    
T  38260330 atgcaa 38260335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 49924309 - 49924437
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||||||||||||||||||||||    
T  49924309 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcat 49924408  T
Q  99 cttttccaatgtaaaattaaatgcaagtt 127  Q
    |||||||||||||||||||||||||||||    
T  49924409 cttttccaatgtaaaattaaatgcaagtt 49924437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 29488638 - 29488768
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||||| ||    
T  29488638 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaataat 29488737  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
     ||||||||||||||||||||||||||||||    
T  29488738 attttccaatgtaaaattaaatgcaagttgc 29488768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 38942711 - 38942581
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||  |||||||||||||||||||||||    
T  38942711 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcat 38942612  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
     ||||||||||||||||||||||||||||||    
T  38942611 tttttccaatgtaaaattaaatgcaagttgc 38942581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 40935883 - 40935753
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||||||| ||||||||||||||    
T  40935883 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgtttcttcaaacaaatcat 40935784  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  40935783 cttttccaatgtaaaattaaatgcaagttgc 40935753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 40960744 - 40960614
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||||||||||||||||||||||    
T  40960744 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcat 40960645  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||| |||||||||||||||||||||||||    
T  40960644 ctttttcaatgtaaaattaaatgcaagttgc 40960614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 44875069 - 44875199
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||||||||    
T  44875069 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcat 44875168  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  44875169 cttttccaatgtaaaattaaatgcaaattgc 44875199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 46949211 - 46949336
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  46949211 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcat 46949310  T
Q  99 cttttccaatgtaaaattaaatgcaa 124  Q
    ||||| ||||||||||||||||||||    
T  46949311 ctttttcaatgtaaaattaaatgcaa 46949336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 26907356 - 26907229
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| |||||    
T  26907356 taaaatataagcaaaaaaatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgctattattatgttttttcaaacaaattatctt 26907257  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    || |||||||||||||||||||| ||||    
T  26907256 tttcaatgtaaaattaaatgcaaattgc 26907229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 31970578 - 31970449
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||||||| |||||||| |||||||||||||||||  |||| ||||||||||||||||    
T  31970578 tcctaaaatataagcaaaaaaatctcattttctttgtatcaaaatataag-aaaaaagatcaacttttatgttatttttatgtcttttcaaacaaatcat 31970480  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  31970479 cttttccaatgtaaaattaaatgcaagttgc 31970449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 18036435 - 18036564
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  18036435 tcctaaaatataaacaaaaatatctcattttctttgtctcaaaatataag-aaaaaagaccaacttttatgctattattatgttttttcaaacaaatcat 18036533  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||| |||||||||||||||| ||||    
T  18036534 cttttccaaagtaaaattaaatgcaaattgc 18036564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 23874093 - 23873967
Alignment:
Q  5 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttt 102  Q
    |||||||||| ||||| ||||||| ||||||||||||||||||| | |||||||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  23874093 aaaatataagcaaaaaaatctcatattctttgtctcaaaatatacgcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttt 23873994  T
Q  103 tccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||| ||||    
T  23873993 tccaatgtaaaattaaatgcaaattgc 23873967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 25990639 - 25990768
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| | ||||| ||||||||||||||||||||| |||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  25990639 tcctaaaatataagcaaaaaaa-ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcat 25990737  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  25990738 cttttccaatgtaaaattaaatgcaaattgc 25990768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 9127936 - 9128055
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||  |||| |||||||||||||||||||||    
T  9127936 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcatctt 9128035  T
Q  102 ttccaatgtaaaattaaatg 121  Q
    || |||||||||||||||||    
T  9128036 tttcaatgtaaaattaaatg 9128055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 15285697 - 15285824
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||| |||||||  ||  ||||||||||||||||||||||||||    
T  15285697 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgccattattatgttttttcaaacaaatcatctt 15285796  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    || |||||||||||||||||||| ||||    
T  15285797 tttcaatgtaaaattaaatgcaaattgc 15285824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 28017551 - 28017678
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatctt 101  Q
    |||||||||| ||||||  |||||| |||||| |||||||||||||| |||||||| ||||||||||| ||||  |||||||||||||||||||||||||    
T  28017551 taaaatataaataaaaaattctcatattctttatctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatctt 28017650  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||| ||||    
T  28017651 ttccaatgtaaaattaaatgcaaattgc 28017678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 39026512 - 39026386
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| || ||||||| |||||||||||||||||| |||||||||||||||||||| |||||  ||||||||||||| ||||||| ||    
T  39026512 taaaatataagcaaaaaaatttcatttt-tttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaataaatcatatt 39026414  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||||||||    
T  39026413 ttccaatgtaaaattaaatgcaagttgc 39026386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 43656303 - 43656177
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||| | |||||||||||| |||  |||||||||||||||||||||||||    
T  43656303 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataaggaaaaaa-atcaacttttatgtcattattatgttttttcaaacaaatcatctt 43656205  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||| ||||    
T  43656204 ttccaatgtaaaattaaatgcaaattgc 43656177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 45358143 - 45358016
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgtta--tttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||| |||||| ||||||||||||| ||  |||||||| ||||||||||||||||||    
T  45358143 taaaatataagcaaaaaaatctaattttctttgtctcaaaatataagcaaaaaaaaccaacttttatgctatttttatgttatttcaaacaaatcatctt 45358044  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||| || |||||    
T  45358043 ttccaatgtaaaattaaatacatgttgc 45358016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 28916781 - 28916655
Alignment:
Q  5 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttt 102  Q
    |||||| ||| ||||| ||||||| || |||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||||||||||||    
T  28916781 aaaatacaagcaaaaaaatctcatattttttgtctcaaaatataagtaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatcttt 28916682  T
Q  103 tccaatgtaaaattaaatgcaagttgc 129  Q
    |||||| ||||||||||||||| ||||    
T  28916681 tccaatataaaattaaatgcaaattgc 28916655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 40219947 - 40220076
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||| || ||||||| |||  |||||||||||||||||||| ||    
T  40219947 tcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagactaatttttatgctattattatgttttttcaaacaaat-at 40220045  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  40220046 cttttccaatgtaaaattaaatgcaaattgc 40220076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 18913611 - 18913486
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||||| |||||| ||||| ||| ||| |||  ||||||||||||||||||||||||||    
T  18913611 taaaatataagcaaaaaaatctcattttct--gtctcaaaatataagcaaaaaataccaattttgatgctatctttatgttttttcaaacaaatcatctt 18913514  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||||||||    
T  18913513 ttccaatgtaaaattaaatgcaagttgc 18913486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 18852116 - 18852243
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||| | |||||||| |||||||||| ||  |||||||||||||||||||| || ||    
T  18852116 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcataaaagacctacttttatgtcattattatgttttttcaaacaaattatttt 18852215  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||| ||||    
T  18852216 ttccaatgtaaaattaaatgcaaattgc 18852243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 4529078 - 4529207
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| || ||||||| |||||||||||||||||| |||||||| ||||||||||| ||||  |||||||||||||| |||||||    
T  4529078 tcctaaaatataagaaaaaaaat-tcattttttttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcat 4529176  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
     ||||||||||||||||||||||||| ||||    
T  4529177 tttttccaatgtaaaattaaatgcaaattgc 4529207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 35941739 - 35941861
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttttcca 106  Q
    |||||| ||||| ||||||| ||||||||||||||||||||| |||||| | ||||||||||| ||||  ||||||||||||||||||||||||||| ||    
T  35941739 tataagaaaaaaaatctcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgctattattatgttttttcaaacaaatcatctttttca 35941838  T
Q  107 atgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||| ||| ||||    
T  35941839 atgtaaaattaaatacaaattgc 35941861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 26479632 - 26479751
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||  |||||| |||||||||||||  ||  |||| |||||||||||||||||||||    
T  26479632 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataaacaaaaaaaaccaacttttatgccattattatattttttcaaacaaatcatctt 26479731  T
Q  102 ttccaatgtaaaattaaatg 121  Q
    ||||||||||||||| ||||    
T  26479732 ttccaatgtaaaattcaatg 26479751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 47996846 - 47996965
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||||||||| ||||||| |||| |  || |||||||||| |||||||| ||| ||||||| ||||  ||||||||||||||||||||||    
T  47996846 tcctaaaatataagtaaaaaaatctcatattctat--cttaaaatataagcaaaaaagatcaatttttatgctattattatgttttttcaaacaaatcat 47996943  T
Q  99 cttttccaatgtaaaattaaat 120  Q
    ||||||||||||||||||||||    
T  47996944 cttttccaatgtaaaattaaat 47996965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 35189092 - 35189210
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatcatc 99  Q
    |||||||||||| |||||  | | || ||||||||||||||||||||| |||||||||||||||||||| |||  ||||| ||||||||||||||| |||    
T  35189092 ctaaaatataagcaaaaattttttatattctttgtctcaaaatataagcaaaaaagaccaacttttatggtattattatgtttttttcaaacaaataatc 35189191  T
Q  100 ttttccaatgtaaaattaa 118  Q
    |||| ||||||||||||||    
T  35189192 tttttcaatgtaaaattaa 35189210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 6848574 - 6848446
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatg-ttttttcaaacaaatca 97  Q
    |||||||||||||| |||||  | |||| ||||||||||||||||||||| |||||||||    ||||||| |||  ||||| ||||||| |||||||||    
T  6848574 tcctaaaatataagcaaaaaattatcatattctttgtctcaaaatataagcaaaaaagac---tttttatgctattattatgtttttttctaacaaatca 6848478  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||| ||||||||||||||| ||||    
T  6848477 tcttttccaatctaaaattaaatgcaaattgc 6848446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 35884112 - 35884211
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| |||||  |||||| |||||| ||| |||||||||| |||||||||||||||||||| |||  |||| ||||||||||||||||||    
T  35884112 tcctaaaatataagcaaaaaattctcatattctttatcttaaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcat 35884211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 36383818 - 36383948
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttc-aaacaaatca 97  Q
    ||||||| |||||| ||| | || | ||||| |||||| ||||||||||| |||||||| |||||||||||||||  |||||||||||| ||| ||||||    
T  36383818 tcctaaattataagcaaagaaattttattttatttgtcacaaaatataagcaaaaaagatcaacttttatgttattattatgttttttctaaaaaaatca 36383917  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    || ||||||| |||||||||||||||| ||||    
T  36383918 tc-tttccaaagtaaaattaaatgcaaattgc 36383948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 44149114 - 44149010
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt-atgtt-ttttcaaacaaatcatctttt 103  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||| |||||||||  ||||| || || |||| ||| ||||||||||||    
T  44149114 aaatataagcaaaaaaatctcattttctttgtcccaaaatataagcaaaaaagacaaacttttattctatttaatcttgtttttaaaaaaatcatctttt 44149015  T
Q  104 ccaat 108  Q
    |||||    
T  44149014 ccaat 44149010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 15311110 - 15311192
Alignment:
Q  43 aatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgca 123  Q
    |||||||  |||||||| ||||||||||| | ||  |||||||||||||||||| |||||||| |||||||||||||||||||    
T  15311110 aatataaacaaaaaagatcaacttttatgctgttattatgttttttcaaacaaaacatctttttcaatgtaaaattaaatgca 15311192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 51339142 - 51339035
Alignment:
Q  25 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 120  Q
    |||||||||||||| |||| |||||||||||||||| |||||||||     ||| |||| |||||||||| |||||||||||||||| |  |||||||||    
T  51339142 tcattttctttgtcgcaaattataagtaaaaaagactaacttttattatatttaattatattttttcaaa-aaatcatcttttccaaagagaaattaaat 51339044  T
Q  121 gcaagttgc 129  Q
    |||| ||||    
T  51339043 gcaatttgc 51339035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 7397602 - 7397725
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta---tgttttttcaaacaaatcatc 99  Q
    ||||| |||||||||||| |  |||||||||||||| |||| |||||| ||||||| | |||||||||  ||||||    ||||||||||| |||| |||    
T  7397602 ctaaattataagtaaaaaaaattcattttctttgtcccaaattataagcaaaaaagcctaacttttatcatatttaattagttttttcaaa-aaattatc 7397700  T
Q  100 ttttccaatgtaaaattaaatgcaa 124  Q
    |||||||| | ||||||||||||||    
T  7397701 ttttccaaaggaaaattaaatgcaa 7397725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 23873906 - 23873861
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  23873906 catctttccatgaaacttattccaaggagaacacaaaaaattatac 23873861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 26907170 - 26907125
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  26907170 catctttccatgaaacttattccaaggagaacacaaaaaattatac 26907125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 38942520 - 38942475
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  38942520 catctttccatgaaacttattccaaggagaacacaaaaaattatac 38942475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 40220137 - 40220182
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  40220137 catctttccatgaaacttattccaaggagaacacaaaaaattatac 40220182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 46949402 - 46949446
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattata 234  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  46949402 catctttccatgaaacttattccaaggagaacacaaaaaattata 46949446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 6786717 - 6786780
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  6786717 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 6786780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 15959921 - 15959850
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 78  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| || |||||| |||||||    
T  15959921 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaatttttatcttattta 15959850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 43667550 - 43667487
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||||||||||||||| ||||||||| |||||||||    
T  43667550 aatataagaaaaaaaaacacattttctttgtctcaaaatataagcaaaaaagacaaacttttat 43667487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 51840740 - 51840633
Alignment:
Q  25 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 120  Q
    ||||||||||||||  ||| |||||||||||||||| |||||||||     ||| |||| |||||||||| |||||||||||||||| |  |||||||||    
T  51840740 tcattttctttgtcgtaaattataagtaaaaaagactaacttttattatatttaattatattttttcaaa-aaatcatcttttccaaagagaaattaaat 51840642  T
Q  121 gcaagttgc 129  Q
    |||| ||||    
T  51840641 gcaatttgc 51840633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 41063634 - 41063760
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatg----ttatttatgttttttcaaacaaatc 96  Q
    ||||||| |||||| ||||| | |||||||| |||||| |||| |||||| |||||||||||||||||||     ||| |||| || ||||||| ||||     
T  41063634 tcctaaattataagcaaaaaaaactcattttatttgtcccaaattataagaaaaaaagaccaacttttatcatttttaattatattgtttcaaa-aaatt 41063732  T
Q  97 atcttttccaatgtaaaattaaatgcaa 124  Q
    ||||||| ||| | ||||||||||||||    
T  41063733 atctttttcaaagaaaaattaaatgcaa 41063760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 15285888 - 15285933
Alignment:
Q  194 tttctatgaaacttattccaaggagaacacaaaaaattatacttca 239  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||    
T  15285888 tttccatgaaacttatttcaaggagaacacaaaaaattatacttca 15285933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 18852304 - 18852349
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  18852304 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 18852349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 25990833 - 25990874
Alignment:
Q  194 tttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  25990833 tttccatgaaacttattccaaggagaacacaaaaaattatac 25990874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 28916594 - 28916549
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||    
T  28916594 catctttccatgaaacttattccaagaagaacacaaaaaattatac 28916549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 31970388 - 31970343
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  31970388 catctttccatgaaacttattccaaggagaacacaaaaaatcatac 31970343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 40935692 - 40935647
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  40935692 catctttccatgaaacttattccaaggagaacacaaaaaatcatac 40935647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 43656116 - 43656071
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  43656116 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 43656071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 40960553 - 40960513
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaat 230  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  40960553 catctttccatgaaacttattccaaggagaacacaaaaaat 40960513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 6787272 - 6787209
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | |||||||||||| || ||||||||||| ||||||||| |||||||||    
T  6787272 aatataagcaaaaaaaactcattttctttatcccaaaatataagcaaaaaagacaaacttttat 6787209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 12449217 - 12449154
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  12449217 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 12449154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 15311260 - 15311303
Alignment:
Q  192 tctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||| |||||||||||||||||||||| ||||||||||||||    
T  15311260 tctttccatgaaacttattccaaggagaatacaaaaaattatac 15311303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 32624256 - 32624193
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  32624256 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 32624193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 7468217 - 7468171
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  7468217 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 7468171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 23392448 - 23392386
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaactt 66  Q
    |||||| |||||||||| | |||||||||||| ||  ||||| ||||||||||||||||||||    
T  23392448 taaaatgtaagtaaaaaaaactcattttctttatccaaaaatgtaagtaaaaaagaccaactt 23392386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 28017008 - 28016962
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  28017008 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 28016962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 18036625 - 18036670
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||    
T  18036625 catcttttcatgaaacttattccaagaagaacacaaaaaattatac 18036670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 18913424 - 18913379
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||    
T  18913424 catcttttcatgaaacttattccgaggagaacacaaaaaattatac 18913379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 39026325 - 39026280
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||    
T  39026325 catctttccatgaaacttatttcaagaagaacacaaaaaattatac 39026280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 44875260 - 44875305
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||||    
T  44875260 catctttccatgaaacttattctaaggagaacacaaaaatttatac 44875305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 47600327 - 47600258
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||| |||||||| ||||| | |||||||||||||||  ||| |||||||||||||||| || ||||||    
T  47600327 tcctataatataagcaaaaaaaactcattttctttgtccgaaagtataagtaaaaaagacaaatttttat 47600258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 49924500 - 49924545
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||    
T  49924500 catctttccatgaaacttatttcaagaagaacacaaaaaattatac 49924545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 2125967 - 2126011
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||||  |||||||||||||||||||| |||||||||    
T  2125967 cattttctttgtcctaaaatataagtaaaaaagacaaacttttat 2126011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 29488838 - 29488874
Alignment:
Q  199 atgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||||||||||||||||||||||||| |||||||||    
T  29488838 atgaaacttattccaaggagaacacaacaaattatac 29488874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 39555817 - 39555773
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  39555817 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 39555773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 1820296 - 1820358
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | |||||||||||| ||  |||||||||||||||||||| |||||||||    
T  1820296 aatataagaaaaaaaa-ctcattttctttatcctaaaatataagtaaaaaagacaaacttttat 1820358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 225
Target Start/End: Original strand, 13291874 - 13291909
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaa 225  Q
    |||||||||||||||||||||||||||| |||||||    
T  13291874 catctttctatgaaacttattccaaggataacacaa 13291909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 16661431 - 16661534
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 119  Q
    |||||||||||| || |||| |||||| |||||||||||||| ||||     ||| ||||||||| ||||| |||| ||||||| ||||  |||||||||    
T  16661431 ctcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaa-aaattatctttttcaatagaaaattaaa 16661529  T
Q  120 tgcaa 124  Q
    |||||    
T  16661530 tgcaa 16661534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 24728907 - 24728860
Alignment:
Q  8 atataagtaaaaacatctcattttctttgtctcaaaatataagtaaaa 55  Q
    ||||||| ||||| | ||||||||||||||||||||||||||| ||||    
T  24728907 atataagcaaaaaaaactcattttctttgtctcaaaatataagaaaaa 24728860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 46803747 - 46803708
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaa 229  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  46803747 catctttctatgaaacttattgcaaggataacacaaaaaa 46803708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 298931 - 298885
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||||||||||||| |||| ||||||||| || ||||||    
T  298931 ctcattttctttgtctcaaaatgtaagcaaaaaagacaaagttttat 298885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 6785353 - 6785399
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||||| ||||||||||| ||||||||  |||||||||    
T  6785353 ctcattttctttgtcacaaaatataagcaaaaaagataaacttttat 6785399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 6848385 - 6848343
Alignment:
Q  193 ctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||    
T  6848385 ctttccatgaaacttatttcaaggagaacacaaaaaatcatac 6848343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 16854015 - 16854065
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaa 57  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||    
T  16854015 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaa 16854065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 33369434 - 33369496
Alignment:
Q  8 atataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||| | |||||||||||||||  | |||||||| ||||||||| | |||||||    
T  33369434 atataagtaaaaaaaactcattttctttgtcctagaatataagcaaaaaagacaagcttttat 33369496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 33431440 - 33431493
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagac 60  Q
    ||||||||| ||||| || |||||||||||||  |||||||||||||||||||||    
T  33431440 aaatataagaaaaaaaat-tcattttctttgttccaaaatataagtaaaaaagac 33431493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 46542861 - 46542911
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaa 57  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||    
T  46542861 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaa 46542911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 47026375 - 47026437
Alignment:
Q  8 atataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||| ||||| |  |||||||||||||   |||||||||||||||||||| |||||||||    
T  47026375 atataagcaaaaaaaattcattttctttgttctaaaatataagtaaaaaagacaaacttttat 47026437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 3076175 - 3076278
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta--tgttttttcaaacaaatcatctttt 103  Q
    ||||||||| ||||| || |||||||||||||||||||||||||   ||||| || |||||||||  ||||||  | | |||| ||| ||||||| ||||    
T  3076175 aaatataagcaaaaaaat-tcattttctttgtctcaaaatataatccaaaaaaacaaacttttattctatttaattttgtttttaaaaaaatcatatttt 3076273  T
Q  104 ccaat 108  Q
    |||||    
T  3076274 ccaat 3076278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 35941922 - 35941967
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| || ||||||||| |||||||| |||||||||||||||    
T  35941922 catctttccataaaacttatttcaaggagagcacaaaaaattatac 35941967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 4672779 - 4672831
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaaga 59  Q
    |||| ||| ||||| | ||||||||||||||| ||||||||||| ||||||||    
T  4672779 aatacaagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaaga 4672831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 13136833 - 13136781
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaa 56  Q
    ||||||||||| ||| | ||||| ||||||||||| ||||||||||| |||||    
T  13136833 taaaatataagcaaataaatctctttttctttgtcgcaaaatataagcaaaaa 13136781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 42966044 - 42966000
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||| |||||| ||||||| ||||||||||||| |||||||||    
T  42966044 cattttatttgtcccaaaatacaagtaaaaaagacaaacttttat 42966000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 50665136 - 50665180
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataag 50  Q
    ||||||||| ||||| | ||||||||||||||| |||||||||||    
T  50665136 aaatataagcaaaaaaaactcattttctttgtcccaaaatataag 50665180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 3e-47; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 8146280 - 8146150
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  8146280 tcctaaaatataagcaaaaaaatctcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcat 8146181  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  8146180 cttttccaatgtaaaattaaatgcaaattgc 8146150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 35462985 - 35462860
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||| |||    
T  35462985 tcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaaacat 35462886  T
Q  99 cttttccaatgtaaaattaaatgcaa 124  Q
    ||||| ||||||||||||||||||||    
T  35462885 ctttttcaatgtaaaattaaatgcaa 35462860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 30086812 - 30086685
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  30086812 taaaatataagcaaaaaaatctcgtattctttgtctcaaaatataagtaaaaaagaccaacttttatgtcattattatgttttttcaaacaaatcatctt 30086713  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||| ||| ||||    
T  30086712 ttccaatgtaaaattaaatacaaattgc 30086685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 8541830 - 8541701
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| |||||||||| ||||||| |||||||||  |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  8541830 tcctaaaatataagcaaaaatatctcatttt-tttgtcttaaaatataacaaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcat 8541732  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  8541731 cttttccaatgtaaaattaaatgcaaattgc 8541701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 16286350 - 16286220
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatg--ttatttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||   | ||||||||||||||||||||| ||    
T  16286350 tcctaaaatataagcaaacaaatctcattttctttgtctcaaaatataagtaaaaaagacaaacttttatgcaatttttatgttttttcaaacaaattat 16286251  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||| |||||||||||||||||||||||||    
T  16286250 ctttttcaatgtaaaattaaatgcaagttgc 16286220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 31690887 - 31690757
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| || |||||||||||||||||  |||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  31690887 tcctaaaatataagcaaaaaaatctcatattttttgtctcaaaatataaacaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcat 31690788  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  31690787 cttttccaatgtaaaattaaatgcaaattgc 31690757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 42364931 - 42365057
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatct 100  Q
    |||||||||||||| ||||  ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    ||||||||||||||||||||    
T  42364931 tcctaaaatataagcaaaagaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttatt--gtttttttcaaacaaatcatct 42365028  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||| ||||    
T  42365029 tttccaatgtaaaattaaatgcaaattgc 42365057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 20914754 - 20914881
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| |  ||||||||||||||| |||||||||| |||||| ||||||||||||| |||||  ||||||||||||||||||||||||    
T  20914754 taaaatataagcaaaaaaaattcattttctttgtcttaaaatataagcaaaaaataccaacttttatgctatttttatgttttttcaaacaaatcatctt 20914853  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||||||||    
T  20914854 ttccaatgtaaaattaaatgcaagttgc 20914881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 13146621 - 13146743
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| |||||||| |||||||||||  |||||||||||||||||||| |||  |||||||||||||||||||||||    
T  13146621 tcctaaaatataagcaaaaaaatctcatattctttgtatcaaaatataaacaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcat 13146720  T
Q  99 cttttccaatgtaaaattaaatg 121  Q
    |||||||||||||||||||||||    
T  13146721 cttttccaatgtaaaattaaatg 13146743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 4 - 126
Target Start/End: Complemental strand, 25962716 - 25962592
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||| |||||| || |||||||||| |||||  ||||||||||||||||||||||||    
T  25962716 taaaatataagcaaaaatatatcattttctttgtctcaaaatataagcaaaaaatacaaacttttatgctatttttatgttttttcaaacaaatcatctt 25962617  T
Q  102 ttccaatgtaaaattaaatgcaagt 126  Q
    || ||||||||||||||||||||||    
T  25962616 tttcaatgtaaaattaaatgcaagt 25962592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 12638782 - 12638911
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| ||||||| || ||| |||||||||||||| ||||||||| |||||||||| ||||  ||||||||||||||||||| ||    
T  12638782 tcctaaaatataagcaaaaaaatctcatattatttatctcaaaatataag-aaaaaagactaacttttatgctattattatgttttttcaaacaaattat 12638880  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
     |||| |||||||||||||||||||| ||||    
T  12638881 ttttttcaatgtaaaattaaatgcaaattgc 12638911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 31317028 - 31316938
Alignment:
Q  41 aaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||| |||||||| |||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31317028 aaaatataagcaaaaaagatcaacttttatgttatttttatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaagttgc 31316938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 37066490 - 37066360
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| || |||| |||||||||| |||||||||| ||||||||| || |||| || ||||  ||| ||||||||||||||| ||    
T  37066490 tcctaaaatataagcaaaaaaatttcatattctttgtcttaaaatataagcaaaaaagactaatttttttgctattattatattttttcaaacaaataat 37066391  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  37066390 cttttccaatgtaaaattaaatgcaaattgc 37066360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 24432637 - 24432537
Alignment:
Q  31 tctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttg 128  Q
    |||||||||||||||||||| |||||| ||||||||||||  |||||  || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  24432637 tctttgtctcaaaatataagcaaaaaaaaccaacttttatactatttttatattttttcaaataaatcatcttttccaatgtaaaattaaatgcaagttg 24432538  T
Q  129 c 129  Q
    |    
T  24432537 c 24432537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 24439464 - 24439594
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaa-acaaatca 97  Q
    ||||||| |||||| ||||| || |||||||||||||| ||||||||||| |||||||| |||||||||||||||  |||||||||||||| | ||||||    
T  24439464 tcctaaattataagcaaaaaaatttcattttctttgtcgcaaaatataagcaaaaaagatcaacttttatgttattattatgttttttcaacaaaaatca 24439563  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    || ||||||| |||||||||||||||| ||||    
T  24439564 tc-tttccaaagtaaaattaaatgcaaattgc 24439594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 8143827 - 8143947
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    ||||||| |||||| ||||| ||| |||||| |||||| || |||||||| |||||||| ||||||||||| |||  ||||||||||||||| ||||| |    
T  8143827 tcctaaattataagaaaaaa-atcacattttttttgtcccataatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatctt 8143925  T
Q  99 cttttccaatgtaaaattaaat 120  Q
    ||||| ||| ||||||||||||    
T  8143926 ctttttcaaagtaaaattaaat 8143947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 20452690 - 20452567
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaa-aaaagaccaacttttatgttat--ttatgttttttcaaacaaatca 97  Q
    ||||||||||||| |||||| ||||||| || ||||| ||||||||||||||| |||||| ||| ||||||| | |  |||| |||||||||| || |||    
T  20452690 tcctaaaatataaataaaaaaatctcatattgtttgtttcaaaatataagtaaaaaaagatcaatttttatgctgttattatattttttcaaataattca 20452591  T
Q  98 tcttttccaatgtaaaattaaatg 121  Q
    ||| || || ||||||||||||||    
T  20452590 tctctttcattgtaaaattaaatg 20452567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 24432476 - 24432431
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  24432476 catctttccatgaaacttattccaaggagaacacaaaaaattatac 24432431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 25962524 - 25962479
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  25962524 catctttccatgaaacttattccaaggagaacacaaaaaattatac 25962479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 31316877 - 31316832
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  31316877 catctttccatgaaacttattccaaggagaacacaaaaaattatac 31316832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 42273529 - 42273632
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta---tgttttttcaaacaaatcatctttt 103  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||| ||||||||| |||||||||  ||||||   |  ||||| ||| ||||||||||||    
T  42273529 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgtttttaaaaaaaatcatctttt 42273628  T
Q  104 ccaa 107  Q
    ||||    
T  42273629 ccaa 42273632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 20914942 - 20914986
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattata 234  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  20914942 catctttccatgaaacttattccaaggagaacacaaaaaattata 20914986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 39505514 - 39505442
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 78  Q
    ||||||||| ||||| |  |||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  39505514 aaatataagcaaaaaaaattcattttctttgtcccaaaatataagcaaaaaagacaaacttttattttattta 39505442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 11262134 - 11262071
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  11262134 aatataagcaaaaaaaacacattttctttgtcccaaaatataagtaaaaaagacaaacttttat 11262071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 12730268 - 12730205
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| || || | ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  12730268 aatataagcaagaaaaactcattttctttgtcccaaaatataagtaaaaaagacaaacttttat 12730205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 20643894 - 20643965
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 78  Q
    |||||||| ||||| | |||||||||||| || ||||||||||| ||||||||| ||||||||| |||||||    
T  20643894 aatataagcaaaaaaaactcattttctttatcccaaaatataagcaaaaaagacaaacttttatcttattta 20643965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 9957680 - 9957626
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta 78  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||    
T  9957680 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttattta 9957626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 8146089 - 8146044
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  8146089 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 8146044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 17825425 - 17825340
Alignment:
Q  40 caaaatataagt-aaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 124  Q
    |||||||||||  ||||||||| || ||||||| || |  | |||||||||||||||||| |||| ||||||||||||||||||||    
T  17825425 caaaatataaggcaaaaaagacaaatttttatgctaatattattttttcaaacaaatcatatttttcaatgtaaaattaaatgcaa 17825340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 25840742 - 25840847
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatcatctt 101  Q
    ||||||||| ||||| | | ||||||||||||| ||||||||||| ||||| ||| |||||||||  ||||||    |||||||| ||| ||||||||||    
T  25840742 aaatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaatgacaaacttttattctatttaatcttgtttttt-aaaaaaatcatctt 25840840  T
Q  102 ttccaat 108  Q
    |||||||    
T  25840841 ttccaat 25840847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 129
Target Start/End: Complemental strand, 2002381 - 2002270
Alignment:
Q  10 ataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaag-accaacttttatgttatttatgttttttcaaacaaatcatcttttccaat 108  Q
    ||||| ||||| |||||| |||||||||| ||||||||||| ||||||  || ||||||||||||||||         |||| ||||||||||||||||     
T  2002381 ataagcaaaaaaatctcactttctttgtcccaaaatataagcaaaaaaatacaaacttttatgttattt---------caaaaaaatcatcttttccaaa 2002291  T
Q  109 gtaaaattaaatgcaagttgc 129  Q
     ||||||||||||||| ||||    
T  2002290 ataaaattaaatgcaaattgc 2002270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 8225343 - 8225406
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| |  |||||||||||||| ||||||||||| ||||||||| |||||||||    
T  8225343 aatataagcaaaaaaaattcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 8225406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 8506353 - 8506456
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 119  Q
    |||||||||||| || |||| ||||||||||||||| |||||||| |     ||| ||||||| ||||||| |||| ||||||||||| | |||||||||    
T  8506353 ctcattttctttctcccaaattataagtaaaaaagatcaacttttgtcatatttaattatgttgtttcaaa-aaattatcttttccaaagaaaaattaaa 8506451  T
Q  120 tgcaa 124  Q
    |||||    
T  8506452 tgcaa 8506456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 34425212 - 34425273
Alignment:
Q  8 atataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||| ||||||| |||||||||||||||  |||||||||| ||||||||| |||||||||    
T  34425212 atataagcaaaaaca-ctcattttctttgtcctaaaatataagcaaaaaagacaaacttttat 34425273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 8959559 - 8959656
Alignment:
Q  27 attttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatg 121  Q
    ||||||||| ||  ||| |||||| |||||||||||||||||||     ||| ||||||||||||||| |||| ||||||||||| | |||||||||||    
T  8959559 attttctttatcctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaagaaaaattaaatg 8959656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 12638972 - 12639017
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| || ||| ||||||||||||||||||||||||||||||    
T  12638972 catctttccataaaatttattccaaggagaacacaaaaaattatac 12639017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 13146812 - 13146857
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| || ||||||||||||| ||||||||||||||||||||    
T  13146812 catctttccataaaacttattccaaagagaacacaaaaaattatac 13146857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 16286159 - 16286114
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||    
T  16286159 catcttttcatgaaacttattccaaagagaacacaaaaaattatac 16286114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 31690696 - 31690651
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||||    
T  31690696 catctttctataaaactcattccaagaagaacacaaaaaattatac 31690651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 32433552 - 32433616
Alignment:
Q  5 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||| ||||| | ||||| ||||||||||||||||||||| ||||||||| || ||||||    
T  32433552 aaaatataagcaaaaaaa-ctcatattctttgtctcaaaatataagcaaaaaagacaaatttttat 32433616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 24439655 - 24439699
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattata 234  Q
    |||||||| ||||||||||||||||| | ||||||||||||||||    
T  24439655 catctttccatgaaacttattccaagaataacacaaaaaattata 24439699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 38280748 - 38280788
Alignment:
Q  30 ttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  38280748 ttctttgtctcaaaatataaataaaaaagacaaacttttat 38280788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 28906984 - 28907087
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 119  Q
    |||||||||||| || |||| |||||| |||||||||||||| ||||     ||| ||||||||| ||||| |||| ||||||| ||||  |||||||||    
T  28906984 ctcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaa-aaattatctttttcaatagaaaattaaa 28907082  T
Q  120 tgcaa 124  Q
    |||||    
T  28907083 tgcaa 28907087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 28943379 - 28943482
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatcttttccaatgtaaaattaaa 119  Q
    |||||||||||| || |||| |||||| |||||||||||||| ||||     ||| ||||||||| ||||| |||| ||||||| ||||  |||||||||    
T  28943379 ctcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaa-aaattatctttttcaatagaaaattaaa 28943477  T
Q  120 tgcaa 124  Q
    |||||    
T  28943478 tgcaa 28943482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 37522840 - 37522777
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||| ||| ||||||||||| ||||||||| |||||||||    
T  37522840 aatataagcaaaaaaaacacattttcttcgtcccaaaatataagcaaaaaagacaaacttttat 37522777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 37563012 - 37562949
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||| ||| ||||||||||| ||||||||| |||||||||    
T  37563012 aatataagcaaaaaaaacacattttcttcgtcccaaaatataagcaaaaaagacaaacttttat 37562949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 104480 - 104438
Alignment:
Q  28 ttttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||| |||| ||||||||||||||||||||| |||||||||    
T  104480 ttttctctgtcccaaaatataagtaaaaaagacaaacttttat 104438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 38130379 - 38130345
Alignment:
Q  25 tcattttctttgtctcaaaatataagtaaaaaaga 59  Q
    |||||||||||||| ||||||||||||||||||||    
T  38130379 tcattttctttgtcccaaaatataagtaaaaaaga 38130345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 8541640 - 8541595
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| | ||||||||||||||| |||| ||||||||||||||    
T  8541640 catctttccaagaaacttattccaagaagaatacaaaaaattatac 8541595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 35462794 - 35462750
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||||    
T  35462794 catctttccatgaaacttat-ccaaggagaaaacaaaaaattatac 35462750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 37066299 - 37066254
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| | ||||||||||||||| |||| ||||||||||||||    
T  37066299 catctttccacgaaacttattccaagaagaatacaaaaaattatac 37066254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 41625798 - 41625689
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatc 96  Q
    ||||||||| |||||||||| | |||||||||||| ||||||||| |||  ||||||||  || ||||||  ||||||    |||||||  ||| |||||    
T  41625798 tcctaaaatgtaagtaaaaata-ctcattttctttatctcaaaatgtaatcaaaaaagataaatttttattctatttattcttgtttttaaaaaaaaatc 41625700  T
Q  97 atcttttccaa 107  Q
    |||||||||||    
T  41625699 atcttttccaa 41625689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 42365118 - 42365159
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaatt 231  Q
    |||||||| ||||||||||||||||  |||||||||||||||    
T  42365118 catctttccatgaaacttattccaataagaacacaaaaaatt 42365159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 842797 - 842753
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||| ||||||||||| ||||||||  |||||||||    
T  842797 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 842753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 4463223 - 4463267
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataag 50  Q
    ||||||||| ||||| | ||||||||||||||| |||||||||||    
T  4463223 aaatataagcaaaaagaactcattttctttgtcccaaaatataag 4463267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 11857938 - 11857990
Alignment:
Q  5 aaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaa 57  Q
    ||||| ||||||||||   |||||||||||||||||||||| |||| ||||||    
T  11857938 aaaatgtaagtaaaaaatactcattttctttgtctcaaaatgtaagcaaaaaa 11857990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 30086622 - 30086578
Alignment:
Q  192 tctttctatgaaacttattccaaggagaacac-aaaaaattatac 235  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||    
T  30086622 tctttccatgaaacttatttcaaggagaacacgaaaaaattatac 30086578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 8e-45; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 30949025 - 30949155
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgttttttcaaacaaatcat 98  Q
    |||||||||||||| | ||| |||| |||||||||||||||||||||||| ||||||||| |||||||||| |||||  |||||||||||||||||||||    
T  30949025 tcctaaaatataagcacaaaaatcttattttctttgtctcaaaatataagcaaaaaagactaacttttatgctatttttatgttttttcaaacaaatcat 30949124  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||||||||    
T  30949125 cttttccaatgtaaaattaaatgcaagttgc 30949155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 31887389 - 31887258
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattt--atgtttttt-caaacaaatca 97  Q
    |||||||||||||| ||||| || ||||||||||||||||||| |||||| | |||||||||||||||||| |||||  ||||||||| |||||||||||    
T  31887389 tcctaaaatataagcaaaaaaatatcattttctttgtctcaaattataagcataaaagaccaacttttatgctatttttatgtttttttcaaacaaatca 31887290  T
Q  98 tcttttccaatgtaaaattaaatgcaagttgc 129  Q
    ||||||||||||||||||||||||||||||||    
T  31887289 tcttttccaatgtaaaattaaatgcaagttgc 31887258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 10227802 - 10227932
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| |||||  |||||| ||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||| ||||||||||||    
T  10227802 tcctaaaatataagcaaaaaattctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttccaaacaaatcat 10227901  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||| ||||||||||||||| ||||    
T  10227902 cttttccaatataaaattaaatgcaaattgc 10227932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 12278596 - 12278726
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| || |||| ||||||||||||||||||||| |||||||| |||||||||||||||  |||||||||||||||||||||||    
T  12278596 tcctaaaatataagcaaaaaaatttcatattctttgtctcaaaatataagcaaaaaagatcaacttttatgttattattatgttttttcaaacaaatcat 12278695  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
     ||||| ||||||||||||||||||| ||||    
T  12278696 tttttcaaatgtaaaattaaatgcaaattgc 12278726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 17722076 - 17721946
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    ||||||||||||| |||||| ||| ||| ||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||| |||||||    
T  17722076 tcctaaaatataactaaaaaaatcccatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaagaaatcat 17721977  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
     ||||||||||||||||||||||||| ||||    
T  17721976 attttccaatgtaaaattaaatgcaaattgc 17721946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 33756148 - 33756276
Alignment:
Q  3 ctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatct 100  Q
    |||||||||||| ||||| ||||||| |||||| |||||||||||||| |||||| ||||||||||||| |||  ||||||||||||||||||||||| |    
T  33756148 ctaaaatataagcaaaaaaatctcatattctttatctcaaaatataagaaaaaaataccaacttttatgctattattatgttttttcaaacaaatcattt 33756247  T
Q  101 tttccaatgtaaaattaaatgcaagttgc 129  Q
    ||| |||||||||||||||||||| ||||    
T  33756248 ttttcaatgtaaaattaaatgcaaattgc 33756276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 373989 - 374119
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| ||||| || |||  |||||| |||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||||||||    
T  373989 tcctaaaatataagcaaaaaaatttcaaattctttatctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcat 374088  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
     |||||| |||||||||||||||||| ||||    
T  374089 attttccgatgtaaaattaaatgcaaattgc 374119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 17598183 - 17598313
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt--tatgttttttcaaacaaatcat 98  Q
    |||||||||||||  |||||  | ||||||| |||||| ||||||||||| ||||||||||||||| |||||||||  |||||||||||||||||||| |    
T  17598183 tcctaaaatataaacaaaaaagtttcattttttttgtcccaaaatataagcaaaaaagaccaacttgtatgttattattatgttttttcaaacaaatctt 17598282  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    |||||||||||||||||||||||||| ||||    
T  17598283 cttttccaatgtaaaattaaatgcaaattgc 17598313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 30766339 - 30766466
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcatctt 101  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||| | |||||||||||||||  ||||||||||||||| |||| || ||    
T  30766339 taaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgttattattatgttttttcaaagaaattatttt 30766438  T
Q  102 ttccaatgtaaaattaaatgcaagttgc 129  Q
    || |||||||||||||||||||| ||||    
T  30766439 tttcaatgtaaaattaaatgcaaattgc 30766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 32882941 - 32882835
Alignment:
Q  9 tataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatttatgttttttcaaacaaatcatcttttccaat 108  Q
    |||||| ||||| || ||||||||||||||  |||||||||| ||||||||||||||||| |||||         ||||||| || |||||||||||||     
T  32882941 tataagcaaaaaaatttcattttctttgtcctaaaatataagcaaaaaagaccaacttttgtgtta---------tttcaaaaaagtcatcttttccaaa 32882851  T
Q  109 gtaaaattaaatgcaa 124  Q
    ||||||||||||||||    
T  32882850 gtaaaattaaatgcaa 32882835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 30766527 - 30766571
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattata 234  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  30766527 catctttccatgaaacttattccaaggagaacacaaaaaattata 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 4031881 - 4032004
Alignment:
Q  4 taaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatcatc 99  Q
    |||| |||||||||||| | |||||||||||| ||||||| |||||| | |||||||||||||| ||     ||| |||||||||||| || |||| |||    
T  4031881 taaattataagtaaaaaaaactcattttctttatctcaaattataagcataaaagaccaactttaatcatatttaattatgttttttcgaa-aaattatc 4031979  T
Q  100 ttttccaatgtaaaattaaatgcaa 124  Q
    ||||| || | ||||||||||||||    
T  4031980 ttttcaaagggaaaattaaatgcaa 4032004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 4987834 - 4987960
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttatt----tatgttttttcaaacaaatc 96  Q
    ||||||| |||||||||||| | |  |||||||||||| |||| ||||| |||||||||| |||||||||  ||||    |||||||||| ||| ||||     
T  4987834 tcctaaattataagtaaaaaaaacctattttctttgtcccaaattataaataaaaaagactaacttttatcatattcaaatatgtttttttaaa-aaatt 4987932  T
Q  97 atcttttccaatgtaaaattaaatgcaa 124  Q
    ||||||| ||| | ||||||||||||||    
T  4987933 atctttttcaaaggaaaattaaatgcaa 4987960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 374180 - 374225
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||    
T  374180 catctttccatgaaacttattctaaggagaacacaaaaaattatac 374225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 7275159 - 7275053
Alignment:
Q  6 aaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatcatctt 101  Q
    ||||||||| ||||| | |||||||| ||||||| |||||||||| |||||| || |||||||||  ||||||    |||||||  ||| ||||||||||    
T  7275159 aaatataagcaaaaaaaactcattttatttgtcttaaaatataagcaaaaaatacaaacttttattatatttaatcttgtttttaaaaaaaaatcatctt 7275060  T
Q  102 ttccaat 108  Q
    |||||||    
T  7275059 ttccaat 7275053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 17721881 - 17721840
Alignment:
Q  194 tttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  17721881 tttccatgaaacttattccaaggagaacacaaaaaattatac 17721840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 30949216 - 30949261
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  30949216 catctttccatgaaacttatttcaaggagaacacaaaaaattatac 30949261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 3095971 - 3095908
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  3095971 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 3095908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 21542329 - 21542392
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  21542329 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 21542392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 34177891 - 34177828
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||||| | | ||||||||||||  |||||||||||||||||| || |||||||||    
T  34177891 aatataagtaaaaaaaacacattttctttgtaccaaaatataagtaaaaaacacaaacttttat 34177828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 3888319 - 3888444
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat----gttatttatgttttttcaaacaaatc 96  Q
    ||||||| |||||| ||||| | |||||||||||| |   ||| |||||| |||||||||||||||||||     ||| ||||||||||||||| ||||     
T  3888319 tcctaaattataagaaaaaaaa-ctcattttctttattctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaatt 3888416  T
Q  97 atcttttccaatgtaaaattaaatgcaa 124  Q
    ||||||| ||| | ||||||||||||||    
T  3888417 atctttttcaaaggaaaattaaatgcaa 3888444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 5822110 - 5822064
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatact 236  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||    
T  5822110 catctttctatgaaacttattccaaagataacacaagaaattatact 5822064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 12278790 - 12278832
Alignment:
Q  193 ctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    ||||| ||||||||||||| |||||||||||||||||||||||    
T  12278790 ctttccatgaaacttattctaaggagaacacaaaaaattatac 12278832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 16013635 - 16013589
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  16013635 ctcattttctttgtctcaaattatgagtaaaatagaccaacttttat 16013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 10227993 - 10228038
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| |||||||||||| |||||||||||    
T  10227993 catctttcgatgaaacttatttcaaggagaacactaaaaattatac 10228038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 5822266 - 5822162
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttattta----tgttttttcaaacaaatcatcttttccaatgtaaaattaaa 119  Q
    |||||||||| |||| |||| |||||  ||||||||| || ||||||  ||||||    |||||||| ||| |||||||||||||||| |  ||||||||    
T  5822266 ctcattttctctgtcccaaattataaacaaaaaagactaatttttatcatatttaattatgtttttttaaaaaaatcatcttttccaaagagaaattaaa 5822167  T
Q  120 tgcaa 124  Q
    |||||    
T  5822166 tgcaa 5822162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 35129305 - 35129242
Alignment:
Q  7 aatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||| ||||| | | ||||||||||||| ||||||| ||| ||||||||| |||||||||    
T  35129305 aatataagcaaaaaaaacacattttctttgtcccaaaatacaagcaaaaaagacaaacttttat 35129242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 1130433 - 1130479
Alignment:
Q  24 ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||||| |||| |||||| |||||| ||||||||||||    
T  1130433 ctcattttctttgtcccaaattataagcaaaaaaaaccaacttttat 1130479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 5121532 - 5121487
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| ||||||||||||  ||||||||||||||||| |||||    
T  5121532 catctttccatgaaacttattttaaggagaacacaaaaaactatac 5121487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 17598374 - 17598419
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| || ||| ||||||||| ||||||||||||||||||||    
T  17598374 catctttccataaaatttattccaaagagaacacaaaaaattatac 17598419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 21964038 - 21964082
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattata 234  Q
    |||||||| || |||||||||  ||||||||||||||||||||||    
T  21964038 catctttccataaaacttattttaaggagaacacaaaaaattata 21964082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 4521 - 4650
Alignment:
Q  1 tcctaaaatataagtaaaaacatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgttat--ttatgttttttcaaacaaatcat 98  Q
    |||||||||||||| |||||  |||||| ||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||| ||||||||||||    
T  4521 tcctaaaatataagcaaaaaattctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttccaaacaaatcat 4620  T
Q  99 cttttccaatgtaaaattaaatgcaagttgc 129  Q
    | |||||||| ||||||||||||||| ||||    
T  4621 c-tttccaatataaaattaaatgcaaattgc 4650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 4711 - 4756
Alignment:
Q  190 catctttctatgaaacttattccaaggagaacacaaaaaattatac 235  Q
    |||||||| |||||||||||| |||||||||||| |||||||||||    
T  4711 catctttcgatgaaacttatttcaaggagaacactaaaaattatac 4756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 154792 - 154835
Alignment:
Q  27 attttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  154792 attttctttgtctcaaaatataagtaaaaaagataaacttttat 154835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 910 - 955
Alignment:
Q  25 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||    
T  910 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 8870 - 8915
Alignment:
Q  25 tcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||    
T  8870 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 8915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 157672 - 157737
Alignment:
Q  6 aaatataagtaaaaacat-ctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||| ||||| || || |||||||||||| ||||||||||| ||||||||| |||||||||    
T  157672 aaatataagcaaaaaaatacttattttctttgtcccaaaatataagcaaaaaagacaaacttttat 157737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 77887 - 77931
Alignment:
Q  26 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  77887 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 77931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 9979 - 10019
Alignment:
Q  30 ttctttgtctcaaaatataagtaaaaaagaccaacttttat 70  Q
    ||||||||| ||||||||||||||||||| | |||||||||    
T  9979 ttctttgtcccaaaatataagtaaaaaaggcaaacttttat 10019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University