View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5681-Insertion-3 (Length: 1020)

Name: NF5681-Insertion-3
Description: NF5681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5681-Insertion-3
NF5681-Insertion-3
[»] chr6 (43 HSPs)
chr6 (544-910)||(3339019-3339387)
chr6 (342-424)||(1171511-1171593)
chr6 (489-545)||(34998146-34998202)
chr6 (489-543)||(21165246-21165300)
chr6 (489-545)||(21953204-21953260)
chr6 (489-544)||(29291358-29291413)
chr6 (489-543)||(18810532-18810586)
chr6 (342-440)||(20393125-20393223)
chr6 (489-545)||(17517314-17517370)
chr6 (486-545)||(3276365-3276424)
chr6 (489-540)||(20391217-20391268)
chr6 (489-543)||(17000282-17000336)
chr6 (489-543)||(20897502-20897556)
chr6 (489-541)||(17516164-17516216)
chr6 (493-545)||(34995112-34995164)
chr6 (125-184)||(1171337-1171396)
chr6 (489-544)||(16995450-16995505)
chr6 (512-554)||(3414376-3414418)
chr6 (497-543)||(20393281-20393327)
chr6 (488-544)||(13268108-13268164)
chr6 (489-540)||(1171656-1171707)
chr6 (496-543)||(1972400-1972447)
chr6 (488-547)||(2615868-2615927)
chr6 (512-547)||(8170120-8170155)
chr6 (489-543)||(1974157-1974211)
chr6 (507-541)||(20895960-20895994)
chr6 (489-543)||(31198615-31198669)
chr6 (512-545)||(1007122-1007155)
chr6 (512-545)||(1007478-1007511)
chr6 (503-540)||(3279518-3279555)
chr6 (512-545)||(3968978-3969011)
chr6 (512-545)||(6412216-6412249)
chr6 (512-545)||(10910933-10910966)
chr6 (512-545)||(18024344-18024377)
chr6 (512-545)||(19129489-19129522)
chr6 (512-545)||(19321100-19321133)
chr6 (512-545)||(20467687-20467720)
chr6 (512-545)||(21147402-21147435)
chr6 (512-545)||(21994372-21994405)
chr6 (512-545)||(22543352-22543385)
chr6 (512-545)||(22543687-22543720)
chr6 (512-545)||(25137326-25137359)
chr6 (492-541)||(30253547-30253596)
[»] chr5 (30 HSPs)
chr5 (15-245)||(3937600-3937829)
chr5 (358-545)||(3937935-3938121)
chr5 (489-544)||(3936577-3936632)
chr5 (489-544)||(27571134-27571189)
chr5 (486-544)||(34911830-34911888)
chr5 (489-545)||(4565391-4565447)
chr5 (490-545)||(15599763-15599818)
chr5 (489-543)||(6894015-6894069)
chr5 (489-545)||(3954050-3954106)
chr5 (493-545)||(31540494-31540546)
chr5 (490-541)||(27570058-27570109)
chr5 (489-541)||(3205107-3205159)
chr5 (489-541)||(25254136-25254188)
chr5 (489-541)||(25317926-25317978)
chr5 (486-541)||(14809165-14809220)
chr5 (486-541)||(15604060-15604114)
chr5 (492-555)||(34910581-34910643)
chr5 (398-440)||(3936681-3936723)
chr5 (489-543)||(31541627-31541681)
chr5 (512-545)||(1104856-1104889)
chr5 (512-545)||(1105117-1105150)
chr5 (512-545)||(5917124-5917157)
chr5 (512-545)||(19565800-19565833)
chr5 (512-545)||(19685015-19685048)
chr5 (512-545)||(20690731-20690764)
chr5 (512-545)||(24443713-24443746)
chr5 (502-543)||(25252641-25252682)
chr5 (502-543)||(25316426-25316467)
chr5 (512-545)||(32108806-32108839)
chr5 (512-545)||(35877021-35877054)
[»] chr8 (48 HSPs)
chr8 (15-245)||(36588931-36589161)
chr8 (342-544)||(36589245-36589447)
chr8 (398-544)||(36588221-36588367)
chr8 (489-545)||(10717119-10717175)
chr8 (489-545)||(10718453-10718509)
chr8 (486-543)||(28997995-28998052)
chr8 (489-545)||(38456735-38456791)
chr8 (489-545)||(45517965-45518021)
chr8 (489-544)||(22534727-22534782)
chr8 (489-544)||(22272275-22272330)
chr8 (489-544)||(22533316-22533371)
chr8 (486-544)||(14197824-14197882)
chr8 (489-542)||(4182623-4182676)
chr8 (489-542)||(28996835-28996888)
chr8 (489-541)||(3483635-3483687)
chr8 (489-545)||(30124228-30124284)
chr8 (489-545)||(38658479-38658535)
chr8 (489-543)||(1420447-1420501)
chr8 (489-543)||(4183984-4184038)
chr8 (489-546)||(22270940-22270997)
chr8 (489-542)||(39440427-39440480)
chr8 (489-545)||(41847185-41847241)
chr8 (489-547)||(1385560-1385618)
chr8 (503-540)||(3484806-3484843)
chr8 (489-545)||(1376933-1376989)
chr8 (489-544)||(20984145-20984200)
chr8 (512-547)||(32726240-32726275)
chr8 (486-541)||(38455449-38455504)
chr8 (489-544)||(39439923-39439978)
chr8 (489-543)||(3031548-3031602)
chr8 (512-546)||(9496338-9496372)
chr8 (383-425)||(18326629-18326671)
chr8 (386-440)||(41846749-41846803)
chr8 (512-545)||(3512235-3512268)
chr8 (512-545)||(4710189-4710222)
chr8 (512-545)||(5357421-5357454)
chr8 (507-544)||(10292815-10292852)
chr8 (512-545)||(10337117-10337150)
chr8 (512-545)||(10337418-10337451)
chr8 (512-545)||(11019826-11019859)
chr8 (512-545)||(17073805-17073838)
chr8 (512-545)||(17574432-17574465)
chr8 (512-545)||(25600228-25600261)
chr8 (512-545)||(25702778-25702811)
chr8 (487-544)||(27117920-27117977)
chr8 (512-545)||(28346727-28346760)
chr8 (512-545)||(35097326-35097359)
chr8 (512-545)||(35346967-35347000)
[»] chr4 (55 HSPs)
chr4 (46-245)||(45619301-45619499)
chr4 (358-545)||(45619605-45619792)
chr4 (342-440)||(32699172-32699270)
chr4 (489-545)||(45618283-45618339)
chr4 (489-544)||(34659705-34659760)
chr4 (486-544)||(3880498-3880556)
chr4 (342-424)||(40198690-40198772)
chr4 (489-545)||(3879084-3879140)
chr4 (489-545)||(19674412-19674468)
chr4 (486-545)||(41933816-41933875)
chr4 (489-543)||(19675625-19675679)
chr4 (489-543)||(22204055-22204109)
chr4 (489-543)||(32699319-32699373)
chr4 (489-543)||(42359351-42359405)
chr4 (489-544)||(33137233-33137288)
chr4 (489-543)||(22205227-22205281)
chr4 (489-544)||(40198576-40198628)
chr4 (492-540)||(41935078-41935126)
chr4 (489-545)||(54121705-54121761)
chr4 (489-548)||(4211556-4211615)
chr4 (489-540)||(16574373-16574424)
chr4 (489-544)||(17281570-17281625)
chr4 (489-544)||(17370072-17370127)
chr4 (489-540)||(17371850-17371901)
chr4 (496-543)||(32697999-32698046)
chr4 (489-547)||(14487798-14487856)
chr4 (489-546)||(12152439-12152496)
chr4 (100-189)||(32698943-32699031)
chr4 (492-545)||(35054660-35054713)
chr4 (493-546)||(38166492-38166545)
chr4 (486-543)||(44705299-44705356)
chr4 (504-544)||(5259171-5259211)
chr4 (492-544)||(16573377-16573429)
chr4 (487-547)||(16916063-16916123)
chr4 (489-544)||(42358031-42358086)
chr4 (511-545)||(13074093-13074127)
chr4 (486-544)||(17326736-17326794)
chr4 (489-543)||(26412530-26412584)
chr4 (512-546)||(29420506-29420540)
chr4 (495-545)||(30091066-30091116)
chr4 (386-424)||(32698112-32698150)
chr4 (489-547)||(33134887-33134945)
chr4 (489-543)||(46292392-46292446)
chr4 (489-542)||(6353584-6353637)
chr4 (512-545)||(11693090-11693123)
chr4 (512-545)||(12152152-12152185)
chr4 (512-545)||(13631226-13631259)
chr4 (512-545)||(14488156-14488189)
chr4 (512-545)||(14594204-14594237)
chr4 (512-545)||(20291984-20292017)
chr4 (503-544)||(29060901-29060942)
chr4 (512-545)||(35464016-35464049)
chr4 (512-545)||(42823774-42823807)
chr4 (512-545)||(53915681-53915714)
chr4 (512-545)||(53916016-53916049)
[»] chr1 (58 HSPs)
chr1 (489-544)||(9774893-9774948)
chr1 (489-545)||(27264221-27264277)
chr1 (486-543)||(24609919-24609976)
chr1 (489-545)||(39163029-39163085)
chr1 (489-544)||(27262907-27262962)
chr1 (489-543)||(20722472-20722526)
chr1 (489-543)||(23469974-23470028)
chr1 (491-545)||(34934754-34934808)
chr1 (489-543)||(46075055-46075109)
chr1 (491-544)||(35911895-35911948)
chr1 (491-544)||(50164402-50164455)
chr1 (489-545)||(35721099-35721155)
chr1 (491-543)||(37396847-37396899)
chr1 (489-544)||(37395632-37395687)
chr1 (489-544)||(47038865-47038920)
chr1 (491-544)||(17977566-17977619)
chr1 (384-440)||(24422618-24422674)
chr1 (489-545)||(46073883-46073939)
chr1 (493-545)||(48334141-48334193)
chr1 (489-540)||(9774040-9774091)
chr1 (489-544)||(20723693-20723748)
chr1 (489-544)||(26863859-26863914)
chr1 (489-544)||(48588966-48589021)
chr1 (489-544)||(48594053-48594108)
chr1 (489-544)||(48598664-48598719)
chr1 (497-543)||(11711266-11711312)
chr1 (489-543)||(17976761-17976815)
chr1 (489-543)||(24427374-24427428)
chr1 (342-440)||(30722219-30722317)
chr1 (494-544)||(45979506-45979556)
chr1 (489-538)||(27816725-27816774)
chr1 (492-545)||(35722293-35722346)
chr1 (384-440)||(24610022-24610078)
chr1 (489-545)||(30724020-30724076)
chr1 (489-544)||(10631474-10631529)
chr1 (489-544)||(11710552-11710607)
chr1 (489-544)||(24611122-24611177)
chr1 (489-544)||(27815440-27815495)
chr1 (495-545)||(2604138-2604188)
chr1 (512-554)||(30323262-30323304)
chr1 (512-545)||(8140432-8140465)
chr1 (512-545)||(10887231-10887264)
chr1 (512-545)||(10887567-10887600)
chr1 (512-553)||(11822334-11822375)
chr1 (512-545)||(12360601-12360634)
chr1 (512-545)||(15516580-15516613)
chr1 (512-545)||(16026907-16026940)
chr1 (510-543)||(24422515-24422548)
chr1 (512-545)||(26324583-26324616)
chr1 (512-545)||(32035757-32035790)
chr1 (512-545)||(35056863-35056896)
chr1 (512-545)||(36912851-36912884)
chr1 (491-543)||(39162823-39162876)
chr1 (512-545)||(39747804-39747837)
chr1 (512-545)||(42482977-42483010)
chr1 (512-545)||(45380270-45380303)
chr1 (512-545)||(45638863-45638896)
chr1 (512-545)||(47819230-47819263)
[»] chr3 (65 HSPs)
chr3 (489-545)||(39820609-39820665)
chr3 (489-545)||(52403129-52403185)
chr3 (492-547)||(42446522-42446577)
chr3 (486-545)||(46026074-46026133)
chr3 (492-543)||(52708625-52708676)
chr3 (489-543)||(4705681-4705735)
chr3 (486-544)||(40477376-40477434)
chr3 (486-546)||(54437469-54437529)
chr3 (489-544)||(52401016-52401071)
chr3 (489-544)||(53121301-53121356)
chr3 (348-424)||(22508852-22508931)
chr3 (489-545)||(976778-976834)
chr3 (489-545)||(20585649-20585705)
chr3 (486-542)||(40476222-40476278)
chr3 (489-545)||(47433814-47433870)
chr3 (490-545)||(38505585-38505640)
chr3 (489-544)||(46027422-46027477)
chr3 (489-544)||(53122476-53122531)
chr3 (491-545)||(22508733-22508787)
chr3 (489-543)||(43641143-43641197)
chr3 (489-543)||(46104343-46104397)
chr3 (486-543)||(9855178-9855235)
chr3 (489-542)||(20489363-20489416)
chr3 (493-542)||(32637197-32637246)
chr3 (503-544)||(44507818-44507859)
chr3 (489-542)||(45267306-45267359)
chr3 (491-543)||(977853-977905)
chr3 (489-545)||(45268575-45268631)
chr3 (489-547)||(20488362-20488420)
chr3 (491-544)||(35639506-35639559)
chr3 (512-548)||(28552016-28552052)
chr3 (489-545)||(30106166-30106222)
chr3 (489-541)||(39819314-39819366)
chr3 (492-544)||(43734049-43734101)
chr3 (496-544)||(44506581-44506629)
chr3 (489-545)||(52707534-52707590)
chr3 (489-544)||(3416494-3416549)
chr3 (503-542)||(15782216-15782255)
chr3 (489-544)||(32635593-32635648)
chr3 (373-440)||(42447676-42447743)
chr3 (493-540)||(50562924-50562971)
chr3 (493-539)||(11914842-11914888)
chr3 (511-545)||(20405191-20405225)
chr3 (512-546)||(29490712-29490746)
chr3 (486-544)||(41780810-41780868)
chr3 (489-543)||(48033058-48033112)
chr3 (374-440)||(52403013-52403079)
chr3 (398-440)||(53632722-53632764)
chr3 (512-545)||(474377-474410)
chr3 (383-440)||(3263251-3263308)
chr3 (512-545)||(9262124-9262157)
chr3 (512-545)||(9603888-9603921)
chr3 (512-545)||(12740905-12740938)
chr3 (495-544)||(20802847-20802896)
chr3 (512-545)||(28552352-28552385)
chr3 (512-545)||(39132875-39132908)
chr3 (512-545)||(40545562-40545595)
chr3 (512-545)||(45002019-45002052)
chr3 (512-545)||(47005488-47005521)
chr3 (512-545)||(47336550-47336583)
chr3 (489-542)||(48035737-48035790)
chr3 (512-545)||(51550080-51550113)
chr3 (512-545)||(51550415-51550448)
chr3 (512-545)||(52342193-52342226)
chr3 (512-545)||(54608832-54608865)
[»] scaffold0002 (4 HSPs)
scaffold0002 (486-545)||(345899-345958)
scaffold0002 (496-545)||(376381-376430)
scaffold0002 (489-548)||(374330-374389)
scaffold0002 (489-545)||(344935-344991)
[»] chr2 (33 HSPs)
chr2 (489-548)||(2412433-2412492)
chr2 (489-545)||(25977868-25977924)
chr2 (489-544)||(1777468-1777523)
chr2 (489-544)||(25979256-25979311)
chr2 (491-543)||(1778797-1778849)
chr2 (489-543)||(2411262-2411316)
chr2 (496-545)||(12068357-12068406)
chr2 (489-545)||(23861750-23861806)
chr2 (489-545)||(30215817-30215873)
chr2 (489-545)||(36837783-36837839)
chr2 (489-540)||(4040221-4040272)
chr2 (489-544)||(30843643-30843698)
chr2 (492-544)||(1590907-1590959)
chr2 (489-544)||(8809595-8809651)
chr2 (489-545)||(10671628-10671684)
chr2 (491-543)||(11087049-11087101)
chr2 (493-545)||(29794326-29794377)
chr2 (489-544)||(18113088-18113143)
chr2 (512-546)||(13215057-13215091)
chr2 (489-543)||(25283277-25283331)
chr2 (486-540)||(43824166-43824220)
chr2 (486-539)||(588540-588593)
chr2 (503-544)||(3924885-3924926)
chr2 (512-545)||(14003407-14003440)
chr2 (512-545)||(16523294-16523327)
chr2 (512-545)||(16673740-16673773)
chr2 (512-545)||(20131315-20131348)
chr2 (512-541)||(21573938-21573967)
chr2 (512-545)||(24358614-24358647)
chr2 (512-545)||(25705418-25705451)
chr2 (512-545)||(31909447-31909480)
chr2 (512-545)||(41451835-41451868)
chr2 (512-545)||(44559060-44559093)
[»] scaffold0001 (2 HSPs)
scaffold0001 (489-543)||(120990-121044)
scaffold0001 (489-543)||(119593-119647)
[»] chr7 (54 HSPs)
chr7 (491-545)||(32197916-32197970)
chr7 (489-545)||(5611512-5611568)
chr7 (489-545)||(17066423-17066479)
chr7 (489-544)||(24195606-24195661)
chr7 (350-420)||(5611373-5611443)
chr7 (100-189)||(5611119-5611206)
chr7 (489-545)||(12933417-12933473)
chr7 (493-545)||(24197112-24197164)
chr7 (486-542)||(31489937-31489993)
chr7 (489-545)||(31848149-31848205)
chr7 (493-545)||(39619800-39619852)
chr7 (489-540)||(11217076-11217127)
chr7 (489-540)||(12385712-12385763)
chr7 (489-544)||(35212067-35212122)
chr7 (489-544)||(42254957-42255012)
chr7 (490-544)||(554244-554298)
chr7 (491-545)||(25046247-25046301)
chr7 (490-540)||(38742184-38742234)
chr7 (491-540)||(32544781-32544830)
chr7 (383-440)||(36748300-36748357)
chr7 (486-542)||(31853549-31853605)
chr7 (489-545)||(41694960-41695016)
chr7 (489-544)||(13418949-13419004)
chr7 (489-548)||(32196679-32196738)
chr7 (489-544)||(41693644-41693699)
chr7 (495-540)||(32543483-32543528)
chr7 (490-543)||(36748198-36748250)
chr7 (512-545)||(40576764-40576797)
chr7 (383-440)||(42255801-42255858)
chr7 (489-545)||(29198301-29198357)
chr7 (384-440)||(31489836-31489892)
chr7 (489-537)||(43869917-43869965)
chr7 (385-424)||(5610276-5610315)
chr7 (489-544)||(44568325-44568380)
chr7 (511-545)||(31846984-31847018)
chr7 (486-544)||(36749249-36749307)
chr7 (512-545)||(1614557-1614590)
chr7 (512-545)||(3975807-3975840)
chr7 (512-545)||(8144627-8144660)
chr7 (512-545)||(11767244-11767277)
chr7 (512-545)||(12932752-12932785)
chr7 (512-545)||(23399610-23399643)
chr7 (512-545)||(23676421-23676454)
chr7 (512-545)||(25988383-25988416)
chr7 (512-545)||(26878040-26878073)
chr7 (512-545)||(28262711-28262744)
chr7 (512-545)||(29198631-29198664)
chr7 (342-424)||(30513148-30513234)
chr7 (512-545)||(35838306-35838339)
chr7 (383-440)||(37784083-37784140)
chr7 (512-545)||(41054205-41054238)
chr7 (383-424)||(42255077-42255118)
chr7 (512-545)||(46759656-46759689)
chr7 (512-545)||(48192457-48192490)
[»] scaffold0562 (1 HSPs)
scaffold0562 (489-545)||(9920-9976)
[»] scaffold0106 (2 HSPs)
scaffold0106 (489-545)||(30912-30968)
scaffold0106 (489-545)||(29727-29783)
[»] scaffold0230 (1 HSPs)
scaffold0230 (489-543)||(436-490)
[»] scaffold0009 (1 HSPs)
scaffold0009 (490-544)||(202578-202632)
[»] scaffold0517 (2 HSPs)
scaffold0517 (491-543)||(10315-10367)
scaffold0517 (489-544)||(11527-11582)
[»] scaffold0765 (1 HSPs)
scaffold0765 (486-540)||(1863-1917)
[»] scaffold0095 (1 HSPs)
scaffold0095 (489-542)||(42760-42813)
[»] scaffold0516 (2 HSPs)
scaffold0516 (374-425)||(1025-1076)
scaffold0516 (489-543)||(1140-1194)
[»] scaffold0599 (1 HSPs)
scaffold0599 (493-539)||(6593-6639)
[»] scaffold0119 (1 HSPs)
scaffold0119 (489-543)||(16724-16778)
[»] scaffold0684 (1 HSPs)
scaffold0684 (512-545)||(2629-2662)
[»] scaffold0160 (1 HSPs)
scaffold0160 (512-545)||(27333-27366)
[»] scaffold0078 (1 HSPs)
scaffold0078 (512-545)||(3750-3783)
[»] scaffold0026 (1 HSPs)
scaffold0026 (512-545)||(82675-82708)
[»] scaffold0024 (1 HSPs)
scaffold0024 (512-545)||(75733-75766)
[»] scaffold0005 (1 HSPs)
scaffold0005 (512-545)||(223141-223174)


Alignment Details
Target: chr6 (Bit Score: 325; Significance: 0; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 544 - 910
Target Start/End: Original strand, 3339019 - 3339387
Alignment:
Q  544 tagatgaaataaatgacaacgaatctcaaattattgttgacctttgaccatttgaagaagaaattagttttgttgttat-aatttaaattttggtttgtt 642  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  3339019 tagatgaaataaatgacaacgaatctcaaattattgttgacctttgaccatttgaagaagaaattagttttgttgttaagaatttaaattttggtttgtt 3339118  T
Q  643 aacatcctattgaattttgaatcttcaataggtatcgttagtgtgtatctaattgtctaaatcacttatattgatctcatattgtggatggggaaggtct 742  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3339119 aacatcctattgaattttgaatcttcaataggtatcgttagtgtgtatctaattgtctaaatcacttatattgatctcgtattgtggatggggaaggtct 3339218  T
Q  743 taattcattatatttttgtttgtgttatgcctatctaaaattttcaatgaataatgtttattttactgtaagaaattttttgatgacgttagttgtgcca 842  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3339219 taattcattatatttttgtttgtgttatgccgatctaaaattttcaatgaatgatgtttattttactgtaagaaattttttgatgacgttagttgtgcca 3339318  T
Q  843 tagtacccatgtgtcgccattaaaccaaggcctcttctaggatgtc-aaagcatagtatgttgatgata 910  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||    
T  3339319 tagtatccatgtgtcgccattaaaccaagacctcttctaggatgtcaaaagcataatatgttgatgata 3339387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 342 - 424
Target Start/End: Original strand, 1171511 - 1171593
Alignment:
Q  342 gccatgtggaggacatgtgggcagcttaacccagtcagccactgccacataggcagaaatgtgacaaatcagcaaaaaagtgg 424  Q
    |||| |||||||||||||||| |||||||| |||||||| |||| ||| |||| |||||||||||||||||||||||||||||    
T  1171511 gccacgtggaggacatgtgggaagcttaacacagtcagcaactgacacgtaggtagaaatgtgacaaatcagcaaaaaagtgg 1171593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 34998146 - 34998202
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  34998146 agggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttagccta 34998202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 21165300 - 21165246
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  21165300 agggaccaaaacacaaactcgctatatttgcagggaccaaaagcatattttagcc 21165246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 21953260 - 21953204
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||    
T  21953260 agggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagccta 21953204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 29291413 - 29291358
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  29291413 agggaccaaaacccaaactcgccatatttgcaaggaccaaaagcatattttagcct 29291358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 18810586 - 18810532
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  18810586 agggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagcc 18810532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 342 - 440
Target Start/End: Original strand, 20393125 - 20393223
Alignment:
Q  342 gccatgtggaggacatgtgggcagcttaacccagtcagccactgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    |||| |||||||||||||||| |||||||| |||||||| |||| ||  || ||| ||  |||||||||||||||||||||||  |||||||| |||||    
T  20393125 gccacgtggaggacatgtgggaagcttaacacagtcagcaactgacatgtatgcaaaagagtgacaaatcagcaaaaaagtggacctagggactatttt 20393223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 17517314 - 17517370
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||  |||||||| ||||||||||||||||||| ||||||||||||||    
T  17517314 agggaccaaaactcaaactcgccatatttgcagggaccaaaaacatattttagccta 17517370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 3276424 - 3276365
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||| |||| | ||| |||||||||||||||||||||||| ||||||||||||||    
T  3276424 actagggactaaaatccaaattcgctatatttgcagggaccaaaaacatattttagccta 3276365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 489 - 540
Target Start/End: Complemental strand, 20391268 - 20391217
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||||||||    
T  20391268 agggaccaaaacccaaattcactatatttgcagggaccaaaagcatatttta 20391217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 17000282 - 17000336
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||| |||||| ||| |||||||||||||||||| |||||||||||    
T  17000282 agggaccaaaacccaaactcactacatttgcagggaccaaaagtatattttagcc 17000336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 20897502 - 20897556
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||||||||||    
T  20897502 agggaccaaaacccaaattcactatatttgcagggaccaaaaccatattttagcc 20897556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 541
Target Start/End: Complemental strand, 17516216 - 17516164
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttag 541  Q
    ||||||||||||| |||||| | ||||||||||||||||||| ||||||||||    
T  17516216 agggaccaaaacccaaactcaccatatttgcagggaccaaaaacatattttag 17516164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 545
Target Start/End: Complemental strand, 34995164 - 34995112
Alignment:
Q  493 accaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||  ||| |||||||||||||||||| ||||||||||||||||||||    
T  34995164 accaaaactcaaattcgctatatttgcagggatcaaaagcatattttagccta 34995112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 1171337 - 1171396
Alignment:
Q  125 tgtgtcttagagattgtagattcaaatctttgaattaaaatttggggatgaacatgaatg 184  Q
    ||||| ||||||| ||||||| ||||| | ||||||||||||||||||||||||| ||||    
T  1171337 tgtgtgttagagactgtagatccaaatttatgaattaaaatttggggatgaacatcaatg 1171396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 16995505 - 16995450
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| ||| ||  |||||||||||||||||||| |||||||||||||    
T  16995505 agggaccaaaacccaaattctttatatttgcagggaccaaaaacatattttagcct 16995450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 512 - 554
Target Start/End: Complemental strand, 3414418 - 3414376
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagcctagatgaaata 554  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  3414418 atatttgcagggaccaaaaccatattttagcctagataaaata 3414376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 497 - 543
Target Start/End: Original strand, 20393281 - 20393327
Alignment:
Q  497 aaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  20393281 aaacccaaattcgctatatttgcagggatcaaaagcatattttagcc 20393327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 488 - 544
Target Start/End: Complemental strand, 13268164 - 13268108
Alignment:
Q  488 tagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||| |||||||||||  |  ||||||||||||||||||| |||||||||||||    
T  13268164 tagggactaaaacctaaacgaggcatatttgcagggaccaaaaccatattttagcct 13268108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 540
Target Start/End: Original strand, 1171656 - 1171707
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    ||||||||||| | ||||||| |||||||||||||| ||||| |||||||||    
T  1171656 agggaccaaaaaccaaactcgttatatttgcagggatcaaaaacatatttta 1171707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 543
Target Start/End: Complemental strand, 1972447 - 1972400
Alignment:
Q  496 aaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||| ||| ||||| |||||||||||||||||| ||||||||||||    
T  1972447 aaaacccaaattcgctttatttgcagggaccaaaaacatattttagcc 1972400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 547
Target Start/End: Complemental strand, 2615927 - 2615868
Alignment:
Q  488 tagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctaga 547  Q
    ||||||| |||||| ||||  | ||||||||||||||| |||| ||||||||||||||||    
T  2615927 tagggactaaaaccaaaacgaggtatatttgcagggactaaaaccatattttagcctaga 2615868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 547
Target Start/End: Original strand, 8170120 - 8170155
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagcctaga 547  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8170120 atatttgcagggaccaaaaccatattttagcctaga 8170155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 1974157 - 1974211
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||  ||| |||||||||||||| ||| ||||| ||||||||||||    
T  1974157 agggaccaaaactcaaattcgctatatttgcaaggatcaaaaacatattttagcc 1974211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 507 - 541
Target Start/End: Complemental strand, 20895994 - 20895960
Alignment:
Q  507 tcgctatatttgcagggaccaaaagcatattttag 541  Q
    |||||||||||||||||||||||| ||||||||||    
T  20895994 tcgctatatttgcagggaccaaaaacatattttag 20895960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 31198669 - 31198615
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||| |||||| ||||  || ||||||||||||||||||| ||||||||||||    
T  31198669 agggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagcc 31198615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 1007155 - 1007122
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  1007155 atatttgcagggaccaaaaccatattttagccta 1007122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 1007478 - 1007511
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  1007478 atatttgcagggaccaaaaccatattttagccta 1007511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 503 - 540
Target Start/End: Original strand, 3279518 - 3279555
Alignment:
Q  503 aaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  3279518 aaactcgctatatttgcagggatcaaaaacatatttta 3279555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 3968978 - 3969011
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  3968978 atatttgcagggaccaaaaccatattttagccta 3969011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 6412249 - 6412216
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  6412249 atatttgcagggaccaaaaccatattttagccta 6412216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 10910933 - 10910966
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  10910933 atatttgcagggaccaaaaccatattttagccta 10910966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 18024344 - 18024377
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  18024344 atatttgcagggaccaaaaccatattttagccta 18024377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 19129489 - 19129522
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  19129489 atatttgcagggaccaaaatcatattttagccta 19129522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 19321100 - 19321133
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  19321100 atatttgcagggaccaaaaccatattttagccta 19321133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 20467687 - 20467720
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  20467687 atatttgcagggaccaaaaccatattttagccta 20467720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 21147435 - 21147402
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  21147435 atatttgcagggaccaaaaccatattttagccta 21147402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 21994372 - 21994405
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  21994372 atatttgcagggaccaaaaccatattttagccta 21994405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 22543385 - 22543352
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  22543385 atatttgcagggaccaaaaccatattttagccta 22543352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 22543687 - 22543720
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  22543687 atatttgcagggaccaaaaccatattttagccta 22543720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 25137326 - 25137359
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  25137326 atatttgcagggaccaaaaccatattttagccta 25137359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 492 - 541
Target Start/End: Original strand, 30253547 - 30253596
Alignment:
Q  492 gaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttag 541  Q
    |||||||||  | ||||||| |||||||||||||||||| ||||||||||    
T  30253547 gaccaaaactcatactcgctgtatttgcagggaccaaaaacatattttag 30253596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 172; Significance: 6e-92; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 15 - 245
Target Start/End: Original strand, 3937600 - 3937829
Alignment:
Q  15 gttttgatatggtgtgcagatttgttgagtttgcagatttggagttatacaagagatgagtgtttttgtgagattcattttcatgggtgtggttttgagg 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3937600 gttttgatatggtgtgcagatttgttgagtgtgcagatttggagttatacaagagatgagtgtttttgtgagattcattttcatgggtgtggttttgagg 3937699  T
Q  115 aagatgaacctgtgtcttagagattgtagattcaaatctttgaattaaaatttggggatgaacatgaatgaattttnnnnnnnnngatgaatgttgtttg 214  Q
    ||||||||| ||||| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||         |||||||||||||||    
T  3937700 aagatgaacttgtgtgtttgagattgtggattcagatctttgaattaaaatttggggatgaacatgaatgaa-tttgttgataaagatgaatgttgtttg 3937798  T
Q  215 aaattaaattaaaattgccccctttctgcag 245  Q
    |||||||||||||||||||||||||||||||    
T  3937799 aaattaaattaaaattgccccctttctgcag 3937829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 358 - 545
Target Start/End: Original strand, 3937935 - 3938121
Alignment:
Q  358 gtgggcagcttaacccagtcagccactgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccattttnnnnnnnnnnnnntttt 457  Q
    |||||||||||||| |||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||             ||||    
T  3937935 gtgggcagcttaacacagtcagcaattgccacgtaggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccattttaaaaaacaaaaactttt 3938034  T
Q  458 gcaaggatgtaattcagattannnnnnnactagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||||| ||||||| |||        || ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  3938035 gcaaggatataattcaaatt-tttttttaccagggaccaaaacctaaacttgctatatttgcagggactaaaagcatattttagccta 3938121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 3936632 - 3936577
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  3936632 agggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcct 3936577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 27571134 - 27571189
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  27571134 agggatcaaaacccaaactcgctatatttgcagggaccaaaatcatattttagcct 27571189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 486 - 544
Target Start/End: Original strand, 34911830 - 34911888
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||| ||||| | |||||||||||||||||||||||||||| |||||||||||||    
T  34911830 actagggatcaaaatccaaactcgctatatttgcagggaccaaaatcatattttagcct 34911888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 4565447 - 4565391
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| |||||||||||||||| |||||| |||| ||||||||||||||    
T  4565447 agggaccaaaacccaaactcgctatatttgtagggactaaaaacatattttagccta 4565391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 490 - 545
Target Start/End: Complemental strand, 15599818 - 15599763
Alignment:
Q  490 gggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||||||||| ||| |||| ||||||| ||||||||||||||||||||||||||    
T  15599818 gggaccaaaacccaaattcgccatatttgtagggaccaaaagcatattttagccta 15599763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 6894015 - 6894069
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||||||||||||||||  ||||||||| ||||||||| ||||||||||||    
T  6894015 agggaccaaaacctaaactcgtcatatttgcaaggaccaaaaacatattttagcc 6894069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 3954106 - 3954050
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| ||| ||| |||||||||| ||||||||| ||||||||||||||    
T  3954106 agggaccaaaacccaaattcgatatatttgcaaggaccaaaaacatattttagccta 3954050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 545
Target Start/End: Complemental strand, 31540546 - 31540494
Alignment:
Q  493 accaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||| ||| ||| |||||||||||||||||||| ||||||||||||||    
T  31540546 accaaaacccaaattcgttatatttgcagggaccaaaaacatattttagccta 31540494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 490 - 541
Target Start/End: Complemental strand, 27570109 - 27570058
Alignment:
Q  490 gggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttag 541  Q
    |||| ||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  27570109 gggaacaaaacccaaactcgctatatttgcaaggaccaaaatcatattttag 27570058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 489 - 541
Target Start/End: Original strand, 3205107 - 3205159
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttag 541  Q
    ||||||||||||| ||||||   ||||||||||||| ||||||||||||||||    
T  3205107 agggaccaaaacccaaactcatcatatttgcagggatcaaaagcatattttag 3205159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 489 - 541
Target Start/End: Original strand, 25254136 - 25254188
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttag 541  Q
    ||||| ||||||  ||||||  |||||||||||||||||||||||||||||||    
T  25254136 agggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttag 25254188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 489 - 541
Target Start/End: Original strand, 25317926 - 25317978
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttag 541  Q
    ||||| ||||||  ||||||  |||||||||||||||||||||||||||||||    
T  25317926 agggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttag 25317978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 541
Target Start/End: Complemental strand, 14809220 - 14809165
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttag 541  Q
    |||||||||||||| | ||| |||||||||||| ||||| ||||| ||||||||||    
T  14809220 actagggaccaaaatccaaattcgctatatttgtagggatcaaaaacatattttag 14809165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 541
Target Start/End: Original strand, 15604060 - 15604114
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttag 541  Q
    |||||||||||||||| |||||||| ||||||||| ||||||||| || |||||||    
T  15604060 actagggaccaaaacccaaactcgccatatttgca-ggaccaaaaacacattttag 15604114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 492 - 555
Target Start/End: Complemental strand, 34910643 - 34910581
Alignment:
Q  492 gaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctagatgaaataa 555  Q
    |||||||||  ||||| ||||||||||||||||  |||| ||||||||||||||||| ||||||    
T  34910643 gaccaaaactcaaacttgctatatttgcagggataaaaa-catattttagcctagataaaataa 34910581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 3936723 - 3936681
Alignment:
Q  398 aaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    |||||||| ||||||||||||||||||||| ||| ||||||||    
T  3936723 aaatgtgataaatcagcaaaaaagtgggtccaggaaccatttt 3936681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 31541627 - 31541681
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||| |||||| ||| ||| |||||||||||||| ||||| ||||||||||||    
T  31541627 agggacaaaaaccaaaattcgttatatttgcagggatcaaaaacatattttagcc 31541681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 1104889 - 1104856
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  1104889 atatttgcagggaccaaaaccatattttagccta 1104856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 1105117 - 1105150
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  1105117 atatttgcagggaccaaaaccatattttagccta 1105150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 5917157 - 5917124
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  5917157 atatttgcagggaccaaaaccatattttagccta 5917124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 19565800 - 19565833
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  19565800 atatttgcagggaccaaaaccatattttagccta 19565833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 19685048 - 19685015
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  19685048 atatttgcagggaccaaaaccatattttagccta 19685015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 20690764 - 20690731
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  20690764 atatttgcagggaccaaaaccatattttagccta 20690731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 24443713 - 24443746
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  24443713 atatttgcagggaccaaaaccatattttagccta 24443746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 502 - 543
Target Start/End: Complemental strand, 25252682 - 25252641
Alignment:
Q  502 taaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  25252682 taaactcgctatatttgcagagatcaaaaacatattttagcc 25252641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 502 - 543
Target Start/End: Complemental strand, 25316467 - 25316426
Alignment:
Q  502 taaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  25316467 taaactcgctatatttgcagagatcaaaaacatattttagcc 25316426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 32108839 - 32108806
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  32108839 atatttgcagggaccaaaaccatattttagccta 32108806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 35877021 - 35877054
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  35877021 atatttgcagggaccaaaaccatattttagccta 35877054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 1e-80; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 15 - 245
Target Start/End: Original strand, 36588931 - 36589161
Alignment:
Q  15 gttttgatatggtgtgcagatttgttgagtttgcagatttggagttatacaagagatgagtgtttttgtgagattcattttcatgggtgtgg-ttttgag 113  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36588931 gttttgatatggtgtgcagatttgttgagtgtgcggatttggagttatgcaagagatgagtgtttttgtgagattcattttcatgggtgtggtttttgag 36589030  T
Q  114 gaagatgaacctgtgtcttagagattgtagattcaaatctttgaattaaaatttggggatgaacatgaatgaattttnnnnnnnnngatgaatgttgttt 213  Q
    |||||||||| ||| | || ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||         ||||||||||||||    
T  36589031 gaagatgaacatgtatgtttgagattgtagattcatatctttgaattaaaatttggggatgaacatgaatgaa-tttgttgataaagatgaatgttgttt 36589129  T
Q  214 gaaattaaattaaaattgccccctttctgcag 245  Q
    |||||||||||||||||||||| |||||||||    
T  36589130 gaaattaaattaaaattgccccttttctgcag 36589161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 342 - 544
Target Start/End: Original strand, 36589245 - 36589447
Alignment:
Q  342 gccatgtggaggacatgtgggcagcttaacccagtcagccactgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccattttn 441  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||     
T  36589245 gccatgtggaggacatgtgggcagcttaacacagtcagcaactgccacgtaggcagaattgtgacaaatcagcaaaaaagtgggtttagggaccatttta 36589344  T
Q  442 nnnnnnnnnnnnttttgcaaggatgtaattcagattannnnnnnactagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttag 541  Q
                |||| ||||||||||||| | |||        || | |||||||||||||||||||||||||||||||| || |||| ||||||||||    
T  36589345 aaaaacaaaaaattttacaaggatgtaattgaaattttttttttaccaaggaccaaaacctaaactcgctatatttgcaggaactaaaatcatattttag 36589444  T
Q  542 cct 544  Q
    |||    
T  36589445 cct 36589447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 398 - 544
Target Start/End: Complemental strand, 36588367 - 36588221
Alignment:
Q  398 aaatgtgacaaatcagcaaaaaagtgggtctagggaccattttnnnnnnnnnnnnnttttgcaaggatgtaattcagattannnnnnnactagggaccaa 497  Q
    |||||||| ||||||||||||||||||||| ||||||||||||             ||||||| |||||||||||| |||        || |||||||||    
T  36588367 aaatgtgataaatcagcaaaaaagtgggtccagggaccattttaaaaaacaaaaaattttgcagggatgtaattcaaattttttttttaccagggaccaa 36588268  T
Q  498 aacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||  ||||||||||||||||||||||||||||||||||||||||||    
T  36588267 aacgcaaactcgctatatttgcagggaccaaaagcatattttagcct 36588221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 10717175 - 10717119
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10717175 agggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagccta 10717119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 10718453 - 10718509
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10718453 agggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagccta 10718509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 486 - 543
Target Start/End: Original strand, 28997995 - 28998052
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  28997995 actagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 28998052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 38456735 - 38456791
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  38456735 agggaccaaaacctaaatttgctatatttgcagggaccaaaagcatattttagccta 38456791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 45517965 - 45518021
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  45517965 agggaccaaaacccaaactcgctatacttgcagggaccaaaagcatattttagccta 45518021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 22534727 - 22534782
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  22534727 agggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttagcct 22534782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 22272275 - 22272330
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  22272275 agggaccaaaacccaaattcgctatatttgcggggaccaaaagcatattttagcct 22272330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 22533371 - 22533316
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  22533371 agggaccaaaacccaaactcgctatatatacagggaccaaaagcatattttagcct 22533316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 486 - 544
Target Start/End: Complemental strand, 14197882 - 14197824
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||||||| | |||||||| ||||||||||||||||||| |||||||||||||    
T  14197882 actagggaccaaaatccaaactcgccatatttgcagggaccaaaaacatattttagcct 14197824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 4182676 - 4182623
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagc 542  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  4182676 agggaccaaaacccaaattcgctatatttacagggaccaaaagcatattttagc 4182623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 28996888 - 28996835
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagc 542  Q
    ||||||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  28996888 agggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagc 28996835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 541
Target Start/End: Complemental strand, 3483687 - 3483635
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttag 541  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||||||||||    
T  3483687 agggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttag 3483635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 30124228 - 30124284
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||||    
T  30124228 agggaccaaaactcaaacttgctttatttgcagggaccaaaagcatattttagccta 30124284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 38658535 - 38658479
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| ||| |||||||||||||| |||||| |||||||||||||||||    
T  38658535 agggaccaaaacccaaattcgctatatttgcatggaccagaagcatattttagccta 38658479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 1420447 - 1420501
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||| | | |||||||||||||||||||||||||||| ||||||||||||    
T  1420447 agggaccaatatccaaactcgctatatttgcagggaccaaaaacatattttagcc 1420501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 4183984 - 4184038
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||| |||| | |||||||||||||||| |||||||||||||||||    
T  4183984 agggaccaaaacccaaacgcactatatttgcagggactaaaagcatattttagcc 4184038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 489 - 546
Target Start/End: Complemental strand, 22270997 - 22270940
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctag 546  Q
    |||||| |||| | ||| |||||||||||||||||| |||||||||||||||||||||    
T  22270997 agggactaaaatccaaattcgctatatttgcagggatcaaaagcatattttagcctag 22270940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 39440427 - 39440480
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagc 542  Q
    ||||||||||||  |||||||| ||||||||| |||||||||||||||||||||    
T  39440427 agggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttagc 39440480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 41847185 - 41847241
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||  ||| ||||||||||||||| ||| |||||||||||||||||||    
T  41847185 agggaccaaaactcaaattcgctatatttgcagagactaaaagcatattttagccta 41847241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 489 - 547
Target Start/End: Original strand, 1385560 - 1385618
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctaga 547  Q
    ||||||||||| | ||| | |||||||||||||||||||||| ||||||| ||||||||    
T  1385560 agggaccaaaatccaaattggctatatttgcagggaccaaaaccatatttaagcctaga 1385618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 540
Target Start/End: Original strand, 3484806 - 3484843
Alignment:
Q  503 aaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    |||||||||||||||||||| |||||||||||||||||    
T  3484806 aaactcgctatatttgcaggaaccaaaagcatatttta 3484843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 1376989 - 1376933
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||| | ||| | |||||||||||||||||||||| ||||||| ||||||    
T  1376989 agggaccaaaatccaaattggctatatttgcagggaccaaaatcatatttaagccta 1376933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 20984200 - 20984145
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||| |||||| ||||  || ||||||||||||||||||| |||||||||||||    
T  20984200 agggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagcct 20984145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 547
Target Start/End: Original strand, 32726240 - 32726275
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagcctaga 547  Q
    ||||||||||||||||||| ||||||||||||||||    
T  32726240 atatttgcagggaccaaaaccatattttagcctaga 32726275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 541
Target Start/End: Complemental strand, 38455504 - 38455449
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttag 541  Q
    |||||||||||||||  ||| || ||||||||||| ||||||||| ||||||||||    
T  38455504 actagggaccaaaactcaaattcactatatttgcaaggaccaaaaacatattttag 38455449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 39439978 - 39439923
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||| |||||||  ||||| || ||||||||||||||||||| |||||||||||||    
T  39439978 agggtccaaaactcaaactagccatatttgcagggaccaaaatcatattttagcct 39439923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 3031548 - 3031602
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||||||||||||   || |||||| |||||||||||| ||||||||||||    
T  3031548 agggaccaaaacctaaatgagccatatttacagggaccaaaaacatattttagcc 3031602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 512 - 546
Target Start/End: Complemental strand, 9496372 - 9496338
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagcctag 546  Q
    ||||||||||||||||||| |||||||||||||||    
T  9496372 atatttgcagggaccaaaaccatattttagcctag 9496338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 383 - 425
Target Start/End: Complemental strand, 18326671 - 18326629
Alignment:
Q  383 ctgccacataggcagaaatgtgacaaatcagcaaaaaagtggg 425  Q
    |||||||||||||||||||| ||||||||| ||| ||||||||    
T  18326671 ctgccacataggcagaaatgggacaaatcaacaagaaagtggg 18326629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 386 - 440
Target Start/End: Complemental strand, 41846803 - 41846749
Alignment:
Q  386 ccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    ||||||||||| ||||| ||||||| |||| ||||||||||||| |||| |||||    
T  41846803 ccacataggcaaaaatgggacaaattagcacaaaagtgggtctaaggactatttt 41846749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 3512235 - 3512268
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  3512235 atatttgcagggaccaaaaccatattttagccta 3512268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 4710189 - 4710222
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  4710189 atatttgcagggaccaaaaccatattttagccta 4710222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 5357454 - 5357421
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  5357454 atatttgcagggaccaaaatcatattttagccta 5357421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 507 - 544
Target Start/End: Complemental strand, 10292852 - 10292815
Alignment:
Q  507 tcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  10292852 tcgctatatttgaagggaccaaaatcatattttagcct 10292815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 10337150 - 10337117
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  10337150 atatttgcagggaccaaaaccatattttagccta 10337117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 10337418 - 10337451
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  10337418 atatttgcagggaccaaaaccatattttagccta 10337451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 11019826 - 11019859
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  11019826 atatttgcagggaccaaaaccatattttagccta 11019859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 17073838 - 17073805
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  17073838 atatttgcagggaccaaaaccatattttagccta 17073805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 17574432 - 17574465
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  17574432 atatttgcagggaccaaaaccatattttagccta 17574465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 25600261 - 25600228
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  25600261 atatttgcagggaccaaaaccatattttagccta 25600228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 25702778 - 25702811
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  25702778 atatttgcagggaccaaaaccatattttagccta 25702811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 487 - 544
Target Start/End: Original strand, 27117920 - 27117977
Alignment:
Q  487 ctagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||||| |||   |  ||||||||||||||||||| |||||||||||||    
T  27117920 ctagggaccaaaaccaaaatgaggcatatttgcagggaccaaaaccatattttagcct 27117977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 28346727 - 28346760
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  28346727 atatttgcagggaccaaaaccatattttagccta 28346760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 35097359 - 35097326
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  35097359 atatttgcagggaccaaaaccatattttagccta 35097326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 35346967 - 35347000
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  35346967 atatttgcagggaccaaaaccatattttagccta 35347000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 1e-80; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 46 - 245
Target Start/End: Original strand, 45619301 - 45619499
Alignment:
Q  46 tgcagatttggagttatacaagagatgagtgtttttgtgagattcattttcatgggtgtggttttgaggaagatgaacctgtgtcttagagattgtagat 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  45619301 tgcagatttggagttatacaagagatgagtgtttttgtgagattcattttcatgggtgtggttttgaggaagatgaacctgtgtgtttgagattgtagat 45619400  T
Q  146 tcaaatctttgaattaaaatttggggatgaacatgaatgaattttnnnnnnnnngatgaatgttgtttgaaattaaattaaaattgccccctttctgcag 245  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  45619401 tcagatctttgaattaaaatttggggatgaacatgaatgaa-tttgttgataaagatgaatgttgtttgaaattaaattaaaattgccccctttctgcag 45619499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 358 - 545
Target Start/End: Original strand, 45619605 - 45619792
Alignment:
Q  358 gtgggcagcttaacccagtcagccactgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccattttnnnnnnnnnnnnntttt 457  Q
    ||||||| |||||| |||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||              ||||    
T  45619605 gtgggcaacttaacacagtcagcaactgccacgtaggcagaaatgtgataaatcagcaaaaaagtgggtctagggaccatttaaaaaaacaaaaactttt 45619704  T
Q  458 gcaaggatgtaattcagattannnnnnnactagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||||| ||||||| |  |       || ||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  45619705 gcaaggatataattcaaaaaaaatttttaccagggaacaaaacctaaactcgctatatttgcagggactaaaaacatattttagccta 45619792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 342 - 440
Target Start/End: Original strand, 32699172 - 32699270
Alignment:
Q  342 gccatgtggaggacatgtgggcagcttaacccagtcagccactgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    |||| |||||||||||||||| || ||||| || ||||| |||| ||| |||| |||||||||||||||||||||||||||||| |||||||| |||||    
T  32699172 gccacgtggaggacatgtgggaagtttaacacaatcagcaactgacacgtaggtagaaatgtgacaaatcagcaaaaaagtgggcctagggactatttt 32699270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 45618339 - 45618283
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  45618339 agggaccaaaacccaaactcgctatatttgcagggaccaaaagcatatattagccta 45618283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 34659760 - 34659705
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  34659760 agggaccaaaaccttaactcgccatatttgcagggaccaaaagcatattttagcct 34659705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 486 - 544
Target Start/End: Original strand, 3880498 - 3880556
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  3880498 actagggaccaaaacccaaactcgctatatttgcaggaaccaaaaacatattttagcct 3880556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 342 - 424
Target Start/End: Complemental strand, 40198772 - 40198690
Alignment:
Q  342 gccatgtggaggacatgtgggcagcttaacccagtcagccactgccacataggcagaaatgtgacaaatcagcaaaaaagtgg 424  Q
    |||| |||||||||||||||| |||||||| |||||||| |||| ||| ||||||||||  |||||||| |||||||||||||    
T  40198772 gccacgtggaggacatgtgggaagcttaacacagtcagcaactgacacgtaggcagaaaaatgacaaattagcaaaaaagtgg 40198690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 3879140 - 3879084
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||    
T  3879140 agggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttagccta 3879084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 19674468 - 19674412
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||    
T  19674468 agggaccaaaactcaaactcgctatatttgcaaggaccaaaagcatattttagccta 19674412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 41933875 - 41933816
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  41933875 actaaggaccaaaacccaaactcgctatatttgcagagaccaaaatcatattttagccta 41933816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 19675625 - 19675679
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||||||||||||    
T  19675625 agggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttagcc 19675679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 22204109 - 22204055
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||| |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  22204109 agggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 22204055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 32699319 - 32699373
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||    
T  32699319 agggaccaaaacccaaactcgctatatttacagggaccaaaaacatattttagcc 32699373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 42359351 - 42359405
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||    
T  42359351 agggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagcc 42359405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 33137233 - 33137288
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||| |||||| |||||||||||||||||||||| ||||| |||||||||||||    
T  33137233 agggactaaaacccaaactcgctatatttgcagggatcaaaaacatattttagcct 33137288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 22205227 - 22205281
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||||||| || |||| |||||||||||||||| |||||||||||||||||    
T  22205227 agggaccaaaacttacactctctatatttgcagggactaaaagcatattttagcc 22205281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 40198628 - 40198576
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| |||||||||||||||||||||   ||||||||||||||||||    
T  40198628 agggaccaaaacccaaactcgctatatttgcaggg---aaaagcatattttagcct 40198576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 492 - 540
Target Start/End: Original strand, 41935078 - 41935126
Alignment:
Q  492 gaccaaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    |||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  41935078 gaccaaaacccaaactcgttatatttgcagggaccaaaaacatatttta 41935126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 54121705 - 54121761
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| ||||||||  |||||||||||| ||||| ||||||||||||||    
T  54121705 agggaccaaaacccaaactcgccgtatttgcagggagcaaaatcatattttagccta 54121761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 548
Target Start/End: Complemental strand, 4211615 - 4211556
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctagat 548  Q
    ||||||||||||| ||||  |  ||||||||||||||||||| |||||||||||||||||    
T  4211615 agggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcctagat 4211556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 540
Target Start/End: Original strand, 16574373 - 16574424
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    |||||||||||| |||| ||||||||||||||||||| |||| |||||||||    
T  16574373 agggaccaaaacttaaattcgctatatttgcagggactaaaaacatatttta 16574424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 17281625 - 17281570
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||| | ||| ||||||||||||||||||| ||||||| ||||||||||    
T  17281625 agggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttagcct 17281570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 17370127 - 17370072
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||| | ||| ||||||||||||||||||| ||||||| ||||||||||    
T  17370127 agggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttagcct 17370072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 540
Target Start/End: Original strand, 17371850 - 17371901
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    ||||||||||||| ||| ||| |||||||||||||| |||||||||||||||    
T  17371850 agggaccaaaacccaaattcgttatatttgcagggatcaaaagcatatttta 17371901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 543
Target Start/End: Complemental strand, 32698046 - 32697999
Alignment:
Q  496 aaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||||| |||||||||||||||||| ||||| ||||||||||||    
T  32698046 aaaacctaaattcgctatatttgcagggatcaaaatcatattttagcc 32697999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 489 - 547
Target Start/End: Complemental strand, 14487856 - 14487798
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctaga 547  Q
    ||||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||||||    
T  14487856 agggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcctaga 14487798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 489 - 546
Target Start/End: Original strand, 12152439 - 12152496
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctag 546  Q
    ||||||||||||| ||||  |  ||||||||||||||||||| |||||||||||||||    
T  12152439 agggaccaaaaccaaaacgagacatatttgcagggaccaaaaccatattttagcctag 12152496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 32698943 - 32699031
Alignment:
Q  100 ggtgtggttttgaggaagatgaacctgtgtcttagagattgtagattcaaatctttgaattaaaatttggggatgaacatgaatgaattt 189  Q
    ||||| ||||||||||||||| |  ||||| ||||| || |||||| || || | ||||||||||||| ||||||||||||||| |||||    
T  32698943 ggtgtagttttgaggaagatggatgtgtgtgttagaaat-gtagatccagatttatgaattaaaatttagggatgaacatgaattaattt 32699031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 35054713 - 35054660
Alignment:
Q  492 gaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||||||| ||| ||||||||||||||||||| |||| ||||||||| ||||    
T  35054713 gaccaaaacccaaattcgctatatttgcagggactaaaatcatattttaaccta 35054660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 493 - 546
Target Start/End: Complemental strand, 38166545 - 38166492
Alignment:
Q  493 accaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctag 546  Q
    ||||||| | ||||||||||||||||||||||  |||| |||||||||||||||    
T  38166545 accaaaatccaaactcgctatatttgcagggattaaaaacatattttagcctag 38166492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 486 - 543
Target Start/End: Complemental strand, 44705356 - 44705299
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||| ||||||||| ||| || |||||||||||| |||||||| ||||||||||||    
T  44705356 actaggaaccaaaacccaaattcactatatttgcagagaccaaaaacatattttagcc 44705299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 504 - 544
Target Start/End: Original strand, 5259171 - 5259211
Alignment:
Q  504 aactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  5259171 aactcgccatatttgcagggaccaaaaacatattttagcct 5259211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 492 - 544
Target Start/End: Complemental strand, 16573429 - 16573377
Alignment:
Q  492 gaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||| ||| |||| ||||||| || ||||||||||||||||||||||    
T  16573429 gaccaaaacccaaattcgccatatttgtagagaccaaaagcatattttagcct 16573377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 487 - 547
Target Start/End: Complemental strand, 16916123 - 16916063
Alignment:
Q  487 ctagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctaga 547  Q
    |||| |||||||||  |||||| | |||||||||||||||||||| ||||||||| |||||    
T  16916123 ctagagaccaaaactcaaactcaccatatttgcagggaccaaaagtatattttagtctaga 16916063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 42358086 - 42358031
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||| ||||||  |||||  ||||||||||||||||||||| |||||||||||||    
T  42358086 agggatcaaaactcaaacttcctatatttgcagggaccaaaaacatattttagcct 42358031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 545
Target Start/End: Original strand, 13074093 - 13074127
Alignment:
Q  511 tatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||||||||||||||||| ||||||||||||||    
T  13074093 tatatttgcagggaccaaaaccatattttagccta 13074127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 486 - 544
Target Start/End: Original strand, 17326736 - 17326794
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||||||||| |||  | ||||||||| ||||||||||| ||||||| |||||    
T  17326736 actagggaccaaaacccaaatgccctatatttggagggaccaaaaccatatttaagcct 17326794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 26412530 - 26412584
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||| |||||| ||||  || ||||||||||||||||||| ||||||||||||    
T  26412530 agggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagcc 26412584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 512 - 546
Target Start/End: Original strand, 29420506 - 29420540
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagcctag 546  Q
    ||||||||||||||||||| |||||||||||||||    
T  29420506 atatttgcagggaccaaaaccatattttagcctag 29420540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 495 - 545
Target Start/End: Original strand, 30091066 - 30091116
Alignment:
Q  495 caaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||| ||||||||  ||||||||| ||||||||| ||||||||||||||    
T  30091066 caaaacttaaactcgtcatatttgcatggaccaaaaccatattttagccta 30091116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 386 - 424
Target Start/End: Complemental strand, 32698150 - 32698112
Alignment:
Q  386 ccacataggcagaaatgtgacaaatcagcaaaaaagtgg 424  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  32698150 ccacataagcaaaaatgtgacaaatcagcaaaaaagtgg 32698112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 489 - 547
Target Start/End: Complemental strand, 33134945 - 33134887
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctaga 547  Q
    ||||||||| | | |||||||  ||||||||||||| ||||| ||||||||||||||||    
T  33134945 agggaccaatatccaaactcgtcatatttgcagggatcaaaaacatattttagcctaga 33134887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 46292446 - 46292392
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  46292446 agggaccaaaaccaaaacgaggcatatttgcagggaccaaaaccatattttagcc 46292392  T

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Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 6353584 - 6353637
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagc 542  Q
    |||||| |||||| ||||  | |||||||||||||||||||| |||||||||||    
T  6353584 agggactaaaaccaaaacgaggtatatttgcagggaccaaaaccatattttagc 6353637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 11693090 - 11693123
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  11693090 atatttgcagggaccaaaaccatattttagccta 11693123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 12152185 - 12152152
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  12152185 atatttgcagggaccaaaaccatattttagccta 12152152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 13631259 - 13631226
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  13631259 atatttgcagggaccaaaaccatattttagccta 13631226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 14488156 - 14488189
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  14488156 atatttgcagggaccaaaaccatattttagccta 14488189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 14594237 - 14594204
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  14594237 atatttgcagggaccaaaaccatattttagccta 14594204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 20292017 - 20291984
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  20292017 atatttgcagggaccaaaatcatattttagccta 20291984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 503 - 544
Target Start/End: Original strand, 29060901 - 29060942
Alignment:
Q  503 aaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||||||||||||  |||| |||||||||||||    
T  29060901 aaactcgctatatttgcagggattaaaaacatattttagcct 29060942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 35464049 - 35464016
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  35464049 atatttgcagggaccaaaaccatattttagccta 35464016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 42823807 - 42823774
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  42823807 atatttgcagggaccaaaatcatattttagccta 42823774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 53915714 - 53915681
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  53915714 atatttgcagggaccaaaaccatattttagccta 53915681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 53916016 - 53916049
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  53916016 atatttgcagggaccaaaaccatattttagccta 53916049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 3e-20; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 9774893 - 9774948
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9774893 agggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcct 9774948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 27264221 - 27264277
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  27264221 agggaccaaaacccaaactcgctatatttgcagggaccaaaatcatattttagccta 27264277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 486 - 543
Target Start/End: Complemental strand, 24609976 - 24609919
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||    
T  24609976 actagggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttagcc 24609919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 39163029 - 39163085
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||    
T  39163029 agggaccaaaacccaacctcgccatatttgcagggaccaaaagcatattttagccta 39163085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 27262962 - 27262907
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||||||||||||    
T  27262962 agggaccaaaacacaaactcgctatatttgcagggaccaaaaacatattttagcct 27262907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 20722526 - 20722472
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||    
T  20722526 agggaccaaaacccaaattcgctatatttgcagggaccaaaagcacattttagcc 20722472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 23469974 - 23470028
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  23469974 agggatcaaaaccgaaactcgctatatttgcagggaccaaaaacatattttagcc 23470028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 491 - 545
Target Start/End: Original strand, 34934754 - 34934808
Alignment:
Q  491 ggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  34934754 ggaccaaaacccaaattcgctatatttgcagggacaaaaagcatattttagccta 34934808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 46075055 - 46075109
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  46075055 agggaccaaaacccaaactcgctatatttgcagggatcaaaaacatattttagcc 46075109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 491 - 544
Target Start/End: Original strand, 35911895 - 35911948
Alignment:
Q  491 ggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||    
T  35911895 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcct 35911948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 491 - 544
Target Start/End: Complemental strand, 50164455 - 50164402
Alignment:
Q  491 ggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||  |||||||| |||||||||||||||||||||||||||||||||    
T  50164455 ggaccaaaactcaaactcgccatatttgcagggaccaaaagcatattttagcct 50164402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 35721155 - 35721099
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| ||| ||| |||||||||||||||||||| ||||||||||||||    
T  35721155 agggaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttagccta 35721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 491 - 543
Target Start/End: Original strand, 37396847 - 37396899
Alignment:
Q  491 ggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||||||||    
T  37396847 ggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcc 37396899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 37395687 - 37395632
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| |||  ||||||||||||||||||||||| |||||||||||||    
T  37395687 agggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttagcct 37395632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 47038920 - 47038865
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| ||||| ||||||||||||||||| |||| |||||||||||||    
T  47038920 agggaccaaaacccaaactagctatatttgcagggactaaaaacatattttagcct 47038865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 491 - 544
Target Start/End: Original strand, 17977566 - 17977619
Alignment:
Q  491 ggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||| |||||    
T  17977566 ggaccaaaacccaaattcgctatatttgcagggaccaaaaccatatttaagcct 17977619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 384 - 440
Target Start/End: Complemental strand, 24422674 - 24422618
Alignment:
Q  384 tgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||| |||| |||||    
T  24422674 tgccacataggcagaaatgagacaaattagcaagaaagtgggtctaaggactatttt 24422618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 46073939 - 46073883
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||| |||||| ||| | |||||||||||||||| ||||||||||||||||||||    
T  46073939 agggactaaaacccaaatttgctatatttgcagggatcaaaagcatattttagccta 46073883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 545
Target Start/End: Original strand, 48334141 - 48334193
Alignment:
Q  493 accaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||  ||| |||||||||||| ||||||||||||||||||||||||||    
T  48334141 accaaaactcaaattcgctatatttgtagggaccaaaagcatattttagccta 48334193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 540
Target Start/End: Complemental strand, 9774091 - 9774040
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    ||||||||||||  ||||||| |||||||||||||||||||| |||||||||    
T  9774091 agggaccaaaactcaaactcgttatatttgcagggaccaaaaacatatttta 9774040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 20723693 - 20723748
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||| |||||  ||| |||||||||||||||||||||||| |||||||||||||    
T  20723693 agggactaaaactcaaattcgctatatttgcagggaccaaaaacatattttagcct 20723748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 26863914 - 26863859
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||  ||| |||||||||||||||||||||||| || ||||||||||    
T  26863914 agggaccaaaactcaaattcgctatatttgcagggaccaaaaacacattttagcct 26863859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 48588966 - 48589021
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| |||||| | |||||| |||||||||||| |||||||||||||    
T  48588966 agggaccaaaacccaaactcaccatatttacagggaccaaaaacatattttagcct 48589021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 48594053 - 48594108
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||| ||||||| |||||||| |||||| |||||||||||| |||||||||||||    
T  48594053 agggatcaaaacccaaactcgccatatttacagggaccaaaaacatattttagcct 48594108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 48598664 - 48598719
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||| ||||||| |||||||| |||||| |||||||||||| |||||||||||||    
T  48598664 agggatcaaaacccaaactcgccatatttacagggaccaaaaacatattttagcct 48598719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 497 - 543
Target Start/End: Original strand, 11711266 - 11711312
Alignment:
Q  497 aaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  11711266 aaacccaaattcgctatatttgcagggaccaaaaacatattttagcc 11711312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 17976815 - 17976761
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||| ||| |||||||||||||||| ||||||| ||||||| ||||    
T  17976815 agggaccaaaacccaaattcgctatatttgcaggaaccaaaaccatatttaagcc 17976761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 24427374 - 24427428
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||| |||||  |||||||||||||||| ||||||||||| ||||||||||||    
T  24427374 agggactaaaactcaaactcgctatatttgtagggaccaaaaacatattttagcc 24427428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 342 - 440
Target Start/End: Complemental strand, 30722317 - 30722219
Alignment:
Q  342 gccatgtggaggacatgtgggcagcttaacccagtcagccactgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    ||||| |||| |||| |||| || ||| || ||||||||   |||||| |||||| ||||| ||||||||||||| |||||||||| |||||| |||||    
T  30722317 gccatctggatgacacgtggccaactttacacagtcagcatttgccacgtaggcaaaaatgagacaaatcagcaagaaagtgggtccagggactatttt 30722219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 494 - 544
Target Start/End: Original strand, 45979506 - 45979556
Alignment:
Q  494 ccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||  ||| |||||||||||||||||||||||| |||||||||||||    
T  45979506 ccaaaactcaaattcgctatatttgcagggaccaaaaacatattttagcct 45979556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 489 - 538
Target Start/End: Original strand, 27816725 - 27816774
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattt 538  Q
    ||||||||||||| ||| | |||||||||||||||||||||| |||||||    
T  27816725 agggaccaaaacccaaattggctatatttgcagggaccaaaaccatattt 27816774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 35722293 - 35722346
Alignment:
Q  492 gaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||||| | ||| ||||||||||| |||||||||||| ||||||||||||||    
T  35722293 gaccaaaatccaaattcgctatatttacagggaccaaaaacatattttagccta 35722346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 384 - 440
Target Start/End: Complemental strand, 24610078 - 24610022
Alignment:
Q  384 tgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    ||||||||| ||| ||||||||||||||| |||||||||||| | |||||| |||||    
T  24610078 tgccacatatgcacaaatgtgacaaatcaccaaaaaagtggggcgagggactatttt 24610022  T

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Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 30724020 - 30724076
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||  ||| | | ||||||||||||||| |||||||||||||||||||    
T  30724020 agggaccaaaactcaaatttgttatatttgcagggacgaaaagcatattttagccta 30724076  T

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Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 10631474 - 10631529
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||| |||||| ||||  || ||||||||||||||||||| |||||||||||||    
T  10631474 agggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagcct 10631529  T

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Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 11710607 - 11710552
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| || |||| ||||||| |||||| ||||| |||||||||||||    
T  11710607 agggaccaaaacccaacctcgttatatttacagggatcaaaaacatattttagcct 11710552  T

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Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 24611122 - 24611177
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||  |||||||  |||||| |||||||||||| |||||||||||||    
T  24611122 agggaccaaaactcaaactcgtcatatttacagggaccaaaaacatattttagcct 24611177  T

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Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 27815495 - 27815440
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| ||| | ||||||||||||||||||| || ||||||| |||||    
T  27815495 agggaccaaaacccaaattggctatatttgcagggaccagaaccatatttaagcct 27815440  T

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Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 495 - 545
Target Start/End: Original strand, 2604138 - 2604188
Alignment:
Q  495 caaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||| |||||| | |||||||||||||| |||| ||||||||||||||    
T  2604138 caaaacccaaactccccatatttgcagggactaaaaacatattttagccta 2604188  T

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Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 512 - 554
Target Start/End: Original strand, 30323262 - 30323304
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagcctagatgaaata 554  Q
    ||||||||||||||||||| |||||||||||||| || |||||    
T  30323262 atatttgcagggaccaaaatcatattttagcctaaataaaata 30323304  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 8140465 - 8140432
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  8140465 atatttgcagggaccaaaaccatattttagccta 8140432  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 10887264 - 10887231
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  10887264 atatttgcagggaccaaaaccatattttagccta 10887231  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 10887567 - 10887600
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  10887567 atatttgcagggaccaaaaccatattttagccta 10887600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 11822334 - 11822375
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagcctagatgaaat 553  Q
    |||||||||||||| |||| |||||||||||||||| |||||    
T  11822334 atatttgcagggactaaaaccatattttagcctagaagaaat 11822375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 12360634 - 12360601
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  12360634 atatttgcagggaccaaaaccatattttagccta 12360601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 15516613 - 15516580
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  15516613 atatttgcagggaccaaaaccatattttagccta 15516580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 16026907 - 16026940
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  16026907 atatttgcagggaccaaaaccatattttagccta 16026940  T

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Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 510 - 543
Target Start/End: Complemental strand, 24422548 - 24422515
Alignment:
Q  510 ctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||| |||||||||||||||||||||||||    
T  24422548 ctatatttacagggaccaaaagcatattttagcc 24422515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 26324616 - 26324583
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  26324616 atatttgcagggaccaaaatcatattttagccta 26324583  T

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Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 32035757 - 32035790
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  32035757 atatttgcagggaccaaaaccatattttagccta 32035790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 35056863 - 35056896
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  35056863 atatttgcagggaccaaaatcatattttagccta 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 36912884 - 36912851
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  36912884 atatttgcagggaccaaaaccatattttagccta 36912851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 491 - 543
Target Start/End: Complemental strand, 39162876 - 39162823
Alignment:
Q  491 ggaccaaaacctaaactcgctat-atttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||| | |||||||| || |||||||||||||||||||||| |||||||    
T  39162876 ggaccaaaatccaaactcgccattatttgcagggaccaaaagcataatttagcc 39162823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 39747804 - 39747837
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  39747804 atatttgcagggaccaaaaccatattttagccta 39747837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 42483010 - 42482977
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  42483010 atatttgcagggaccaaaaccatattttagccta 42482977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 45380303 - 45380270
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  45380303 atatttgcagggaccaaaaccatattttagccta 45380270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 45638863 - 45638896
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  45638863 atatttgcagggaccaaaaccatattttagccta 45638896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 47819263 - 47819230
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  47819263 atatttgcagggaccaaaaccatattttagccta 47819230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 2e-18; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 39820609 - 39820665
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  39820609 agggaccaaaacccaaactcgctatatttgcagggaccaaaaccatattttagccta 39820665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 52403129 - 52403185
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  52403129 agggaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttagccta 52403185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 492 - 547
Target Start/End: Complemental strand, 42446577 - 42446522
Alignment:
Q  492 gaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctaga 547  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  42446577 gaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttagcctaga 42446522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 46026133 - 46026074
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  46026133 actagggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagccta 46026074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 492 - 543
Target Start/End: Original strand, 52708625 - 52708676
Alignment:
Q  492 gaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  52708625 gaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcc 52708676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 4705735 - 4705681
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  4705735 agggaccaaaacctaaactcgccatatttgcagggatcaaaagcatattttagcc 4705681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 486 - 544
Target Start/End: Original strand, 40477376 - 40477434
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  40477376 actagggaccaaaacccaaactcgttatatttgcagggaccaaaatcatattttagcct 40477434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 486 - 546
Target Start/End: Original strand, 54437469 - 54437529
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctag 546  Q
    |||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||||||    
T  54437469 actagggaccaaaactcaaattcgctatatttgcagggaccaaaaacatattttagcctag 54437529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 52401071 - 52401016
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  52401071 agggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttagcct 52401016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 53121356 - 53121301
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  53121356 agggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcct 53121301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 22508931 - 22508852
Alignment:
Q  348 tggaggacatgtgggcagcttaacccagtcagcc---actgccacataggcagaaatgtgacaaatcagcaaaaaagtgg 424  Q
    ||||||||||||||| |||||||| ||||||||    |||| || ||||||| |||||||||||||||||||||||||||    
T  22508931 tggaggacatgtgggaagcttaacacagtcagcagcaactgacatataggcataaatgtgacaaatcagcaaaaaagtgg 22508852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 976834 - 976778
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  976834 agggactaaaacttaaattcgctatatttgcagggatcaaaagcatattttagccta 976778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 20585649 - 20585705
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||    
T  20585649 agggaccaaaatccaaactcgctatatttgcagggatcaaaaacatattttagccta 20585705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 486 - 542
Target Start/End: Complemental strand, 40476278 - 40476222
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagc 542  Q
    ||||| |||||||| | |||||||||||||||||||||||||||| |||||||||||    
T  40476278 actagagaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagc 40476222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 47433814 - 47433870
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||||    
T  47433814 agggaccaaaactcaaattcgctatatttgcagggaccaaaaccatattttagccta 47433870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 490 - 545
Target Start/End: Original strand, 38505585 - 38505640
Alignment:
Q  490 gggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||||||||  |||||||| ||||||||||||| ||||||||||||||||||||    
T  38505585 gggaccaaaactcaaactcgccatatttgcagggagcaaaagcatattttagccta 38505640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 46027422 - 46027477
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||||   ||||||||||||||||||||||||||||| ||||||||||||    
T  46027422 agggaccaaaattcaaactcgctatatttgcagggaccaaaagtatattttagcct 46027477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 53122476 - 53122531
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||||| || |||| |||||||||||||||| ||||||||||||||||||    
T  53122476 agggaccaaaacttacactctctatatttgcagggactaaaagcatattttagcct 53122531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 545
Target Start/End: Complemental strand, 22508787 - 22508733
Alignment:
Q  491 ggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||| ||||    
T  22508787 ggaccaaaactcaaactcgctatatttgcagggaccaaaatcatattttaaccta 22508733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 43641197 - 43641143
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||| || | ||||||||||||||||||||||| |||||||||||||||||    
T  43641197 agggaccataatccaaactcgctatatttgcagggactaaaagcatattttagcc 43641143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 46104397 - 46104343
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||| |||||  |||||||||||||||||||||||||||| ||||||||||||    
T  46104397 agggacaaaaactcaaactcgctatatttgcagggaccaaaatcatattttagcc 46104343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 486 - 543
Target Start/End: Complemental strand, 9855235 - 9855178
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||||||||| | ||||||||||||||| |||||| ||||| ||||||||||||    
T  9855235 actagggaccaaaatccaaactcgctatatttacagggatcaaaatcatattttagcc 9855178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 20489363 - 20489416
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagc 542  Q
    ||||||||||||| |||||||  ||||||||||||||||||| |||||||||||    
T  20489363 agggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttagc 20489416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 493 - 542
Target Start/End: Original strand, 32637197 - 32637246
Alignment:
Q  493 accaaaacctaaactcgctatatttgcagggaccaaaagcatattttagc 542  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  32637197 accaaaacccaaactcgctacatttacagggaccaaaagcatattttagc 32637246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 503 - 544
Target Start/End: Original strand, 44507818 - 44507859
Alignment:
Q  503 aaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  44507818 aaactcgctatatttgcagggaccaaaatcatattttagcct 44507859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 45267359 - 45267306
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagc 542  Q
    ||||||||||||  |||||||||||||||||||||| ||||| |||||||||||    
T  45267359 agggaccaaaactcaaactcgctatatttgcagggatcaaaaacatattttagc 45267306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 491 - 543
Target Start/End: Original strand, 977853 - 977905
Alignment:
Q  491 ggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||| |||||||  ||||||||||||||||||||||||||| ||||    
T  977853 ggaccaaaacccaaactcgtcatatttgcagggaccaaaagcatatttcagcc 977905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 45268575 - 45268631
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| ||||| ||||||||||||||||  |||| ||||||||||||||    
T  45268575 agggaccaaaacccaaacttgctatatttgcagggattaaaaacatattttagccta 45268631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 489 - 547
Target Start/End: Complemental strand, 20488420 - 20488362
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctaga 547  Q
    ||||||||||||| ||| || | ||||||||||||||||||| |||||||||| |||||    
T  20488420 agggaccaaaacccaaattcaccatatttgcagggaccaaaaacatattttagtctaga 20488362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 491 - 544
Target Start/End: Complemental strand, 35639559 - 35639506
Alignment:
Q  491 ggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||  ||||| ||||||||| || |||||||||||||||||||||||    
T  35639559 ggaccaaaactcaaacttgctatattttcaaggaccaaaagcatattttagcct 35639506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 512 - 548
Target Start/End: Complemental strand, 28552052 - 28552016
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagcctagat 548  Q
    ||||||||||||||||||| |||||||||||||||||    
T  28552052 atatttgcagggaccaaaaccatattttagcctagat 28552016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 30106166 - 30106222
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||| |||||| ||||  | |||||||||||||||||||| ||||||||||||||    
T  30106166 agggactaaaaccaaaacgaggtatatttgcagggaccaaaaccatattttagccta 30106222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 489 - 541
Target Start/End: Complemental strand, 39819366 - 39819314
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttag 541  Q
    |||||||||||   ||||||||||||||||||||||| |||| ||||||||||    
T  39819366 agggaccaaaattcaaactcgctatatttgcagggactaaaaccatattttag 39819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 492 - 544
Target Start/End: Original strand, 43734049 - 43734101
Alignment:
Q  492 gaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||| ||||| |||||||||||| | |||||| ||||||||||||||    
T  43734049 gaccaaaacccaaacttgctatatttgcaagaaccaaacgcatattttagcct 43734101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 496 - 544
Target Start/End: Complemental strand, 44506629 - 44506581
Alignment:
Q  496 aaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||| ||||||| ||||||||||||||| |||| |||||||||||||    
T  44506629 aaaaccaaaactcgttatatttgcagggactaaaaccatattttagcct 44506581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 52707590 - 52707534
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||  ||| |||||||||||||| ||||||||| ||||||||| ||||    
T  52707590 agggaccaaaactcaaattcgctatatttgcaaggaccaaaaacatattttaaccta 52707534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 3416549 - 3416494
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||| | ||||| ||||||||| |||||| ||||| |||||||||||||    
T  3416549 agggaccaaaaaccaaacttgctatatttacagggatcaaaatcatattttagcct 3416494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 503 - 542
Target Start/End: Complemental strand, 15782255 - 15782216
Alignment:
Q  503 aaactcgctatatttgcagggaccaaaagcatattttagc 542  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  15782255 aaactcgctatatttgcagggaccaaaaatatattttagc 15782216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 32635648 - 32635593
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| ||||||||||||||| || |||| ||||  ||||||||||||    
T  32635648 agggaccaaaacccaaactcgctatatttacaaggacaaaaaatatattttagcct 32635593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 440
Target Start/End: Original strand, 42447676 - 42447743
Alignment:
Q  373 cagtcagccactgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    ||||||||  ||| |||||||||| ||||| ||||||||||||| |||||||||| | |||| |||||    
T  42447676 cagtcagcatctgtcacataggcaaaaatgggacaaatcagcaagaaagtgggtccaaggactatttt 42447743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 50562971 - 50562924
Alignment:
Q  493 accaaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    |||||||||||||||  ||||||||| ||||||||||| |||||||||    
T  50562971 accaaaacctaaacttactatatttgtagggaccaaaaacatatttta 50562924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 493 - 539
Target Start/End: Original strand, 11914842 - 11914888
Alignment:
Q  493 accaaaacctaaactcgctatatttgcagggaccaaaagcatatttt 539  Q
    ||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  11914842 accaaaacccaaattcgctatatttgcagggactaaaagcacatttt 11914888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 545
Target Start/End: Original strand, 20405191 - 20405225
Alignment:
Q  511 tatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||||||||||||||||| ||||||||||||||    
T  20405191 tatatttgcagggaccaaaaccatattttagccta 20405225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 512 - 546
Target Start/End: Original strand, 29490712 - 29490746
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagcctag 546  Q
    ||||||||||||||||||| |||||||||||||||    
T  29490712 atatttgcagggaccaaaaccatattttagcctag 29490746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 486 - 544
Target Start/End: Original strand, 41780810 - 41780868
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||| ||||| ||||| |||||||||  ||||| ||||| |||||||||||||    
T  41780810 actagggaccgaaacccaaacttgctatatttttagggatcaaaaacatattttagcct 41780868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 48033112 - 48033058
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||| | |||||| | ||||||||| ||||||||| ||||||||||||    
T  48033112 agggaccaaaatccaaactcaccatatttgcaaggaccaaaaacatattttagcc 48033058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 374 - 440
Target Start/End: Original strand, 52403013 - 52403079
Alignment:
Q  374 agtcagccactgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    ||||||| | ||||||||| ||| ||||||||||||||| ||| |||||||||| | |||| |||||    
T  52403013 agtcagctaatgccacatatgcacaaatgtgacaaatcatcaagaaagtgggtccaaggactatttt 52403079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 53632722 - 53632764
Alignment:
Q  398 aaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||    
T  53632722 aaatgggacaaatcagcaagaaagtgggtctagggactatttt 53632764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 474377 - 474410
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  474377 atatttgcagggaccaaaaccatattttagccta 474410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 383 - 440
Target Start/End: Original strand, 3263251 - 3263308
Alignment:
Q  383 ctgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    ||||||||||||||||| |||| ||||| ||||| ||||||||  ||||||| |||||    
T  3263251 ctgccacataggcagaactgtgccaaataagcaagaaagtggggttagggactatttt 3263308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 9262124 - 9262157
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  9262124 atatttgcagggaccaaaaccatattttagccta 9262157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 9603888 - 9603921
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  9603888 atatttgcagggaccaaaaccatattttagccta 9603921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 12740938 - 12740905
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  12740938 atatttgcagggaccaaaaccatattttagccta 12740905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 495 - 544
Target Start/End: Complemental strand, 20802896 - 20802847
Alignment:
Q  495 caaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||| |||||||||||||||| |||||| | || |||||||||||||    
T  20802896 caaaacccaaactcgctatatttgtagggactagaaacatattttagcct 20802847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 28552352 - 28552385
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  28552352 atatttgcagggaccaaaaccatattttagccta 28552385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 39132875 - 39132908
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  39132875 atatttgcagggaccaaaaccatattttagccta 39132908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 40545595 - 40545562
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  40545595 atatttgcagggaccaaaaccatattttagccta 40545562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 45002052 - 45002019
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  45002052 atatttgcagggaccaaaaccatattttagccta 45002019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 47005488 - 47005521
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  47005488 atatttgcagggaccaaaaccatattttagccta 47005521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 47336550 - 47336583
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  47336550 atatttgcagggaccaaaaccatattttagccta 47336583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 48035737 - 48035790
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagc 542  Q
    ||||||||||| | |||||||  ||||||||||||| ||||| |||||||||||    
T  48035737 agggaccaaaatccaaactcgtcatatttgcagggatcaaaaacatattttagc 48035790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 51550113 - 51550080
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  51550113 atatttgcagggaccaaaaccatattttagccta 51550080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 51550415 - 51550448
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  51550415 atatttgcagggaccaaaaccatattttagccta 51550448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 52342226 - 52342193
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  52342226 atatttgcagggaccaaaaccatattttagccta 52342193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 54608832 - 54608865
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  54608832 atatttgcagggaccaaaaccatattttagccta 54608865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 6e-18; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 345899 - 345958
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  345899 actagggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttagccta 345958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 496 - 545
Target Start/End: Original strand, 376381 - 376430
Alignment:
Q  496 aaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  376381 aaaacccaaactcgctatatttgcagggaccaaaagcatattttagccta 376430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 489 - 548
Target Start/End: Complemental strand, 374389 - 374330
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctagat 548  Q
    ||||||||||||| |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  374389 agggaccaaaacccaaactcgctatatttgcagggatcaaaatcatattttagccaagat 374330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 344991 - 344935
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| |||||||| ||||||||||||||||||| ||||||| ||||||    
T  344991 agggaccaaaacccaaactcgccatatttgcagggaccaaaatcatatttgagccta 344935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 6e-18; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 489 - 548
Target Start/End: Original strand, 2412433 - 2412492
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctagat 548  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  2412433 agggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcctagat 2412492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 25977924 - 25977868
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  25977924 agggaccaaaacccaaactcactatatttgcagggaccaaaaacatattttagccta 25977868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 1777523 - 1777468
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||||||||||||    
T  1777523 agggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttagcct 1777468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 25979256 - 25979311
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||    
T  25979256 agggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttagcct 25979311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 491 - 543
Target Start/End: Original strand, 1778797 - 1778849
Alignment:
Q  491 ggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  1778797 ggaccaaaacccaaagtcgctatatttgcaggaaccaaaagcatattttagcc 1778849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 2411316 - 2411262
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||||||| || |||| |||||||||||||||| |||||||||||||||||    
T  2411316 agggaccaaaacttacactctctatatttgcagggactaaaagcatattttagcc 2411262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 496 - 545
Target Start/End: Original strand, 12068357 - 12068406
Alignment:
Q  496 aaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  12068357 aaaacttaaattcgctatatttgcagggatcaaaagcatattttagccta 12068406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 23861806 - 23861750
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||| | |||||| | ||||||||||||||||||| ||||||||||||||    
T  23861806 agggaccaaaatccaaactctccatatttgcagggaccaaaaacatattttagccta 23861750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 30215817 - 30215873
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||| |||||| |||| || |||||||||||||||||||| ||||||||||||||    
T  30215817 agggactaaaaccaaaacgcgatatatttgcagggaccaaaaccatattttagccta 30215873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 36837783 - 36837839
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| ||||||||||||||||||| ||||||||  |||||||| ||||    
T  36837783 agggaccaaaacccaaactcgctatatttgcagagaccaaaaatatattttaaccta 36837839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 540
Target Start/End: Original strand, 4040221 - 4040272
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    ||||| ||||||||||| || ||||||||||||||||||||| |||||||||    
T  4040221 agggagcaaaacctaaattctctatatttgcagggaccaaaatcatatttta 4040272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 30843698 - 30843643
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| ||||||| ||||||||||| ||  ||||||||||||||||||    
T  30843698 agggaccaaaacccaaactcgttatatttgcagtgattaaaagcatattttagcct 30843643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 492 - 544
Target Start/End: Original strand, 1590907 - 1590959
Alignment:
Q  492 gaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||| ||||||||| ||||||| || ||||||||| |||||||||||||    
T  1590907 gaccaaaatctaaactcgttatattttcaaggaccaaaaacatattttagcct 1590959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 8809651 - 8809595
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgca-gggaccaaaagcatattttagcct 544  Q
    ||||||||||||| ||| ||| |||||||||| |||||||||| |||||||||||||    
T  8809651 agggaccaaaacccaaattcgttatatttgcaagggaccaaaaacatattttagcct 8809595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 10671684 - 10671628
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||| |||||| ||||  | |||||||||||||||||||| ||||||||||||||    
T  10671684 agggactaaaaccaaaacgagatatatttgcagggaccaaaaccatattttagccta 10671628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 491 - 543
Target Start/End: Complemental strand, 11087101 - 11087049
Alignment:
Q  491 ggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||| | ||||||||||||||||||||||  |||| ||||||||||||    
T  11087101 ggaccaaaagccaaactcgctatatttgcagggattaaaatcatattttagcc 11087049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 493 - 545
Target Start/End: Original strand, 29794326 - 29794377
Alignment:
Q  493 accaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||  ||| |||||||||||||||||||||||| ||||||||||||||    
T  29794326 accaaaactcaaattcgctatatttgcagggaccaaaa-catattttagccta 29794377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 18113143 - 18113088
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||| |||||| ||||| |  ||||||||||||||||||| |||||||||||||    
T  18113143 agggactaaaaccaaaactaggcatatttgcagggaccaaaaccatattttagcct 18113088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 512 - 546
Target Start/End: Complemental strand, 13215091 - 13215057
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagcctag 546  Q
    ||||||||||||||||||| |||||||||||||||    
T  13215091 atatttgcagggaccaaaaccatattttagcctag 13215057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 25283277 - 25283331
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||| ||||||  ||| ||||||||||||||| |||||||| ||||||||||||    
T  25283277 agggatcaaaactcaaattcgctatatttgcagtgaccaaaaacatattttagcc 25283331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 486 - 540
Target Start/End: Complemental strand, 43824220 - 43824166
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    |||||||||||||||  ||| | ||||||||||||||||| |||| |||||||||    
T  43824220 actagggaccaaaactcaaatttgctatatttgcagggacgaaaaacatatttta 43824166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 588540 - 588593
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatatttt 539  Q
    |||||||| ||||||  ||||||| ||||||||||||||| |||| ||||||||    
T  588540 actagggatcaaaactcaaactcgttatatttgcagggacaaaaaacatatttt 588593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 503 - 544
Target Start/End: Original strand, 3924885 - 3924926
Alignment:
Q  503 aaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||| ||||||||| ||| |||||||||||||||||||    
T  3924885 aaactcgccatatttgcaaggagcaaaagcatattttagcct 3924926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 14003440 - 14003407
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  14003440 atatttgcagggaccaaaaccatattttagccta 14003407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 16523294 - 16523327
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  16523294 atatttgcagggaccaaaaccatattttagccta 16523327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 16673740 - 16673773
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  16673740 atatttgcagggaccaaaaccatattttagccta 16673773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 20131348 - 20131315
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  20131348 atatttgcagggaccaaaaccatattttagccta 20131315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 541
Target Start/End: Complemental strand, 21573967 - 21573938
Alignment:
Q  512 atatttgcagggaccaaaagcatattttag 541  Q
    ||||||||||||||||||||||||||||||    
T  21573967 atatttgcagggaccaaaagcatattttag 21573938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 24358647 - 24358614
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  24358647 atatttgcagggaccaaaaccatattttagccta 24358614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 25705418 - 25705451
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  25705418 atatttgcagggaccaaaaccatattttagccta 25705451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 31909447 - 31909480
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  31909447 atatttgcagggaccaaaaccatattttagccta 31909480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 41451868 - 41451835
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  41451868 atatttgcagggaccaaaaccatattttagccta 41451835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 44559093 - 44559060
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  44559093 atatttgcagggaccaaaaccatattttagccta 44559060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 3e-17; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 120990 - 121044
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  120990 agggaccaaaacccaaactcgttatatttgcagggaccaaaagcatattttagcc 121044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 119647 - 119593
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||  ||| |||||||||||||||||||||||||||||||||||||    
T  119647 agggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcc 119593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 3e-17; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 491 - 545
Target Start/End: Original strand, 32197916 - 32197970
Alignment:
Q  491 ggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  32197916 ggaccaaaacccaaattcgctatatttgcagggaccaaaagcatattttagccta 32197970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 5611512 - 5611568
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  5611512 agggacgaaaacccaaactcgctatatttgcagggaccaaaatcatattttagccta 5611568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 17066479 - 17066423
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||    
T  17066479 agggaccaaaacccaaactcgctatatttgcagggattaaaagcatattttagccta 17066423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 24195661 - 24195606
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  24195661 agggagcaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcct 24195606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 350 - 420
Target Start/End: Original strand, 5611373 - 5611443
Alignment:
Q  350 gaggacatgtgggcagcttaacccagtcagccactgccacataggcagaaatgtgacaaatcagcaaaaaa 420  Q
    ||||||||||||| |||||||| |||| | | |||| ||| ||||||||||||||||||||||||||||||    
T  5611373 gaggacatgtgggaagcttaacacagttaacaactgacacgtaggcagaaatgtgacaaatcagcaaaaaa 5611443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 5611119 - 5611206
Alignment:
Q  100 ggtgtggttttgaggaagatgaacctgtgtcttagagattgtagattcaaatctttgaattaaaatttggggatgaacatgaatgaattt 189  Q
    ||||||||||||||||||||||   ||||| ||||| || |||||| ||||| | ||||||||||||||||||||||||||||| |||||    
T  5611119 ggtgtggttttgaggaagatgatg-tgtgtgttagaaat-gtagatccaaatttgtgaattaaaatttggggatgaacatgaattaattt 5611206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 12933473 - 12933417
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||||||||   |||||| ||||||||||||||||||||||||||||||||||||    
T  12933473 agggaccaaaattcaaactcactatatttgcagggaccaaaagcatattttagccta 12933417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 493 - 545
Target Start/End: Original strand, 24197112 - 24197164
Alignment:
Q  493 accaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||  ||| |||||||||||||||||||||||||||||||||||||||    
T  24197112 accaaaactcaaattcgctatatttgcagggaccaaaagcatattttagccta 24197164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 486 - 542
Target Start/End: Original strand, 31489937 - 31489993
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagc 542  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  31489937 actaaggaccaaaacccaaactcgttatatttgcagggaccaaaaacatattttagc 31489993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 31848149 - 31848205
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||||||||||||||    
T  31848149 agggaccaaaacccaaattcgctatatttgcagggactaaaaacatattttagccta 31848205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 493 - 545
Target Start/End: Original strand, 39619800 - 39619852
Alignment:
Q  493 accaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||    
T  39619800 accaaaacccaaactcgccatatttgcatggaccaaaagcatattttagccta 39619852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 489 - 540
Target Start/End: Original strand, 11217076 - 11217127
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  11217076 agggaccaaaattcaaactcgctatatttgcagggaccaaaagcatatttta 11217127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 489 - 540
Target Start/End: Original strand, 12385712 - 12385763
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    ||||||||||| | |||||||||||||||||||||||||||| |||||||||    
T  12385712 agggaccaaaatccaaactcgctatatttgcagggaccaaaatcatatttta 12385763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 35212122 - 35212067
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| |||||||  ||||||||||||||||||| |||||||||||||    
T  35212122 agggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttagcct 35212067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 42255012 - 42254957
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||  |||||||| |||||| ||||||||||||||||||||||||||    
T  42255012 agggaccaaaactcaaactcgccatatttacagggaccaaaagcatattttagcct 42254957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 490 - 544
Target Start/End: Complemental strand, 554298 - 554244
Alignment:
Q  490 gggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||||| |||||||||||||||||||||||||| |  ||||||||||||    
T  554298 gggaccaaaacccaaactcgctatatttgcagggaccaatattatattttagcct 554244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 545
Target Start/End: Original strand, 25046247 - 25046301
Alignment:
Q  491 ggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||    
T  25046247 ggaccaaaatctaaactcgccatatttgcaaggaccaaaatcatattttagccta 25046301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 490 - 540
Target Start/End: Complemental strand, 38742234 - 38742184
Alignment:
Q  490 gggaccaaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    |||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  38742234 gggaccaaaacccaaactcgctatatttgcagggactaaaaacatatttta 38742184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 491 - 540
Target Start/End: Original strand, 32544781 - 32544830
Alignment:
Q  491 ggaccaaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  32544781 ggaccaaaacccaaattcgctatatttgcagggaccaaaatcatatttta 32544830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 36748357 - 36748300
Alignment:
Q  383 ctgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| || ||| |||||    
T  36748357 ctgccacataggcaaaaatgagacaaatcagcaaaaaagtgggtccagagactatttt 36748300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 486 - 542
Target Start/End: Complemental strand, 31853605 - 31853549
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagc 542  Q
    |||||||||||||| | |||||| | ||||||||||||||||||| |||||||||||    
T  31853605 actagggaccaaaatccaaactcacaatatttgcagggaccaaaaacatattttagc 31853549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 41694960 - 41695016
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||  ||||||||||||||||||||||  |||| ||||||||||||||    
T  41694960 agggaccaaaactcaaactcgctatatttgcagggatgaaaaacatattttagccta 41695016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 13419004 - 13418949
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||| ||| ||| |||| ||||||||||||||||||| |||||||||||||    
T  13419004 agggaccaatacccaaattcgcaatatttgcagggaccaaaaacatattttagcct 13418949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 548
Target Start/End: Complemental strand, 32196738 - 32196679
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcctagat 548  Q
    ||||||||||| | |||  ||||||||||||||||||||||| ||||||||||| |||||    
T  32196738 agggaccaaaatccaaatacgctatatttgcagggaccaaaaacatattttagcatagat 32196679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 41693699 - 41693644
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| ||| |||| ||||||||||||| ||||| |||||||||||||    
T  41693699 agggaccaaaacccaaattcgccatatttgcagggatcaaaaacatattttagcct 41693644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 495 - 540
Target Start/End: Complemental strand, 32543528 - 32543483
Alignment:
Q  495 caaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||    
T  32543528 caaaacccaaacttgctatatttgtagggaccaaaagcatatttta 32543483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 543
Target Start/End: Complemental strand, 36748250 - 36748198
Alignment:
Q  490 gggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||||||||| |||||| | ||||||||||||||||||| ||||||||||||    
T  36748250 gggaccaaaacccaaactctc-atatttgcagggaccaaaaacatattttagcc 36748198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 40576797 - 40576764
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||||||||||||||||||    
T  40576797 atatttgcagggaccaaaagcatattttagccta 40576764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 440
Target Start/End: Original strand, 42255801 - 42255858
Alignment:
Q  383 ctgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    ||||||||||||| |||||| ||||||||||||| |||||| |||||| ||| |||||    
T  42255801 ctgccacataggctgaaatgagacaaatcagcaagaaagtgtgtctagagactatttt 42255858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 29198357 - 29198301
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||| |||||| ||||  | |||||||||||||||||||| ||||||||||||||    
T  29198357 agggactaaaaccaaaacgagatatatttgcagggaccaaaaccatattttagccta 29198301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 384 - 440
Target Start/End: Original strand, 31489836 - 31489892
Alignment:
Q  384 tgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||| | ||||| |||||    
T  31489836 tgccacataggcaaaaatgagacaaatcagcaagaaagtgggtttggggactatttt 31489892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 489 - 537
Target Start/End: Original strand, 43869917 - 43869965
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatatt 537  Q
    ||||||||||||| ||| | |||||||||||||||||||||| ||||||    
T  43869917 agggaccaaaacccaaattggctatatttgcagggaccaaaaccatatt 43869965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 424
Target Start/End: Complemental strand, 5610315 - 5610276
Alignment:
Q  385 gccacataggcagaaatgtgacaaatcagcaaaaaagtgg 424  Q
    |||||||| ||| |||||||||||||||||||||||||||    
T  5610315 gccacataagcaaaaatgtgacaaatcagcaaaaaagtgg 5610276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 44568380 - 44568325
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||| |||||| ||||  | |||||||||||||||||||| |||||||||||||    
T  44568380 agggactaaaaccaaaacgagttatatttgcagggaccaaaaccatattttagcct 44568325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 545
Target Start/End: Complemental strand, 31847018 - 31846984
Alignment:
Q  511 tatatttgcagggaccaaaagcatattttagccta 545  Q
    |||||||||||||||||||||||||||||| ||||    
T  31847018 tatatttgcagggaccaaaagcatattttaaccta 31846984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 486 - 544
Target Start/End: Original strand, 36749249 - 36749307
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||||||||  |||||||  |||||||||  |||||||| |||||||||||||    
T  36749249 actagggaccaaaactcaaactcgtcatatttgcaatgaccaaaaacatattttagcct 36749307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 1614590 - 1614557
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  1614590 atatttgcagggaccaaaaccatattttagccta 1614557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 3975807 - 3975840
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  3975807 atatttgcagggaccaaaaccatattttagccta 3975840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 8144627 - 8144660
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  8144627 atatttgcagggaccaaaaccatattttagccta 8144660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 11767244 - 11767277
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  11767244 atatttgcagggaccaaaaccatattttagccta 11767277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 12932752 - 12932785
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  12932752 atatttgcagggaccaaaaacatattttagccta 12932785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 23399643 - 23399610
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  23399643 atatttgcagggaccaaaaccatattttagccta 23399610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 23676421 - 23676454
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  23676421 atatttgcagggaccaaaaccatattttagccta 23676454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 25988416 - 25988383
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  25988416 atatttgcagggaccaaaaccatattttagccta 25988383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 26878040 - 26878073
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  26878040 atatttgcagggaccaaaaccatattttagccta 26878073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 28262744 - 28262711
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  28262744 atatttgcagggaccaaaaccatattttagccta 28262711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 29198631 - 29198664
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  29198631 atatttgcagggaccaaaaccatattttagccta 29198664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 342 - 424
Target Start/End: Original strand, 30513148 - 30513234
Alignment:
Q  342 gccatgtggaggacatgtgggcagcttaacccagtcagccactgccacataggcagaaatgtgaca----aatcagcaaaaaagtgg 424  Q
    |||| ||||||||||| || | |||||||| || ||||| |||| ||  |||||||||||||||||    |||||||||||||||||    
T  30513148 gccacgtggaggacatatgtgaagcttaacacattcagcaactgacatgtaggcagaaatgtgacaaattaatcagcaaaaaagtgg 30513234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 35838306 - 35838339
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  35838306 atatttgcagggaccaaaaccatattttagccta 35838339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 37784140 - 37784083
Alignment:
Q  383 ctgccacataggcagaaatgtgacaaatcagcaaaaaagtgggtctagggaccatttt 440  Q
    ||||||||||||||| |||| ||||||||||||| ||||| |||| | |||| |||||    
T  37784140 ctgccacataggcaggaatgagacaaatcagcaagaaagttggtccaaggactatttt 37784083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 41054205 - 41054238
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  41054205 atatttgcagggaccaaaaccatattttagccta 41054238  T

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Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 383 - 424
Target Start/End: Complemental strand, 42255118 - 42255077
Alignment:
Q  383 ctgccacataggcagaaatgtgacaaatcagcaaaaaagtgg 424  Q
    |||||||||| ||||||||| ||||||||||||| |||||||    
T  42255118 ctgccacatatgcagaaatgggacaaatcagcaagaaagtgg 42255077  T

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Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 46759689 - 46759656
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  46759689 atatttgcagggaccaaaaccatattttagccta 46759656  T

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Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 48192457 - 48192490
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  48192457 atatttgcagggaccaaaaccatattttagccta 48192490  T

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Target: scaffold0562 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 9976 - 9920
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||    
T  9976 agggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttagccta 9920  T

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Target: scaffold0106 (Bit Score: 45; Significance: 4e-16; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 30912 - 30968
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  30912 agggaccaaaacccaaactcactatatttgcagggaccaaaaccatattttagccta 30968  T

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Target: scaffold0106; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 29783 - 29727
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||| | ||||||| | |||||||||||||||||||||||||||||||||    
T  29783 agggaccaaaatccaaactcgttttatttgcagggaccaaaagcatattttagccta 29727  T

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Target: scaffold0230 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 436 - 490
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  436 agggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttagcc 490  T

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Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 490 - 544
Target Start/End: Complemental strand, 202632 - 202578
Alignment:
Q  490 gggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    |||||||||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  202632 gggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttagcct 202578  T

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Target: scaffold0517 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 491 - 543
Target Start/End: Complemental strand, 10367 - 10315
Alignment:
Q  491 ggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||||||||    
T  10367 ggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcc 10315  T

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Target: scaffold0517; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 489 - 544
Target Start/End: Original strand, 11527 - 11582
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcct 544  Q
    ||||||||||||| |||  ||||||||||||||||||||||| |||||||||||||    
T  11527 agggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttagcct 11582  T

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Target: scaffold0765 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 486 - 540
Target Start/End: Complemental strand, 1917 - 1863
Alignment:
Q  486 actagggaccaaaacctaaactcgctatatttgcagggaccaaaagcatatttta 540  Q
    |||||||| ||||||  |||||||||||||||||||||||||||| |||||||||    
T  1917 actagggatcaaaactcaaactcgctatatttgcagggaccaaaatcatatttta 1863  T

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Target: scaffold0095 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 42760 - 42813
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagc 542  Q
    ||||||||||||  |||||||| ||||||||| |||||||||||||||||||||    
T  42760 agggaccaaaactcaaactcgccatatttgcaaggaccaaaagcatattttagc 42813  T

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Target: scaffold0516 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 374 - 425
Target Start/End: Original strand, 1025 - 1076
Alignment:
Q  374 agtcagccactgccacataggcagaaatgtgacaaatcagcaaaaaagtggg 425  Q
    ||||||| | ||||||||||||||||||||| ||||||| ||| ||||||||    
T  1025 agtcagcgaatgccacataggcagaaatgtgccaaatcatcaataaagtggg 1076  T

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Target: scaffold0516; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 1140 - 1194
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    ||||||||||||  |||||||| |||||||||| ||||||||  |||||||||||    
T  1140 agggaccaaaactcaaactcgccatatttgcagagaccaaaaatatattttagcc 1194  T

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Target: scaffold0599 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 493 - 539
Target Start/End: Original strand, 6593 - 6639
Alignment:
Q  493 accaaaacctaaactcgctatatttgcagggaccaaaagcatatttt 539  Q
    ||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  6593 accaaaacccaaattcgctatatttgcagggactaaaagcacatttt 6639  T

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Target: scaffold0119 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 16778 - 16724
Alignment:
Q  489 agggaccaaaacctaaactcgctatatttgcagggaccaaaagcatattttagcc 543  Q
    |||||| |||||| ||||  | |||||||||||||||||||| ||||||||||||    
T  16778 agggactaaaaccaaaacgagatatatttgcagggaccaaaatcatattttagcc 16724  T

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Target: scaffold0684 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 2629 - 2662
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  2629 atatttgcagggaccaaaaccatattttagccta 2662  T

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Target: scaffold0160 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 27333 - 27366
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  27333 atatttgcagggaccaaaaccatattttagccta 27366  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 3783 - 3750
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  3783 atatttgcagggaccaaaaccatattttagccta 3750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 82675 - 82708
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  82675 atatttgcagggaccaaaaccatattttagccta 82708  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 75733 - 75766
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  75733 atatttgcagggaccaaaaccatattttagccta 75766  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 223141 - 223174
Alignment:
Q  512 atatttgcagggaccaaaagcatattttagccta 545  Q
    ||||||||||||||||||| ||||||||||||||    
T  223141 atatttgcagggaccaaaaccatattttagccta 223174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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