View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5681_high_12 (Length: 309)

Name: NF5681_high_12
Description: NF5681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5681_high_12
NF5681_high_12
[»] chr8 (55 HSPs)
chr8 (1-295)||(28769397-28769691)
chr8 (192-295)||(35869746-35869849)
chr8 (191-285)||(3645884-3645978)
chr8 (166-295)||(31884477-31884606)
chr8 (186-268)||(39392746-39392828)
chr8 (163-295)||(29592590-29592722)
chr8 (162-237)||(31875675-31875750)
chr8 (162-288)||(7026610-7026736)
chr8 (192-266)||(14482111-14482185)
chr8 (186-287)||(6918245-6918346)
chr8 (186-295)||(10727100-10727209)
chr8 (199-287)||(34788493-34788581)
chr8 (167-237)||(6918915-6918985)
chr8 (192-295)||(29699163-29699266)
chr8 (164-274)||(40357777-40357890)
chr8 (164-294)||(4558679-4558809)
chr8 (214-288)||(36337965-36338039)
chr8 (201-295)||(42597319-42597413)
chr8 (200-237)||(25869361-25869398)
chr8 (206-295)||(30013142-30013230)
chr8 (186-295)||(34770795-34770904)
chr8 (166-243)||(35220811-35220888)
chr8 (166-294)||(1117229-1117356)
chr8 (162-266)||(2364560-2364664)
chr8 (192-236)||(6966817-6966861)
chr8 (204-296)||(10383751-10383842)
chr8 (164-268)||(11119084-11119188)
chr8 (162-285)||(20672651-20672772)
chr8 (220-280)||(26215433-26215493)
chr8 (219-295)||(29973017-29973093)
chr8 (192-296)||(35453680-35453784)
chr8 (224-295)||(1470914-1470985)
chr8 (166-237)||(2107442-2107513)
chr8 (199-285)||(8629025-8629109)
chr8 (166-237)||(12972739-12972810)
chr8 (164-295)||(38561607-38561738)
chr8 (192-237)||(2833446-2833492)
chr8 (192-237)||(2840267-2840313)
chr8 (192-237)||(2844954-2845000)
chr8 (162-248)||(8536153-8536239)
chr8 (226-288)||(26820142-26820204)
chr8 (193-287)||(38036178-38036272)
chr8 (206-295)||(11056725-11056814)
chr8 (162-235)||(26716554-26716627)
chr8 (186-295)||(27728079-27728188)
chr8 (207-295)||(35298535-35298624)
chr8 (164-229)||(41933335-41933400)
chr8 (206-287)||(42370427-42370508)
chr8 (206-234)||(6526361-6526389)
chr8 (251-295)||(6864517-6864561)
chr8 (192-295)||(10114398-10114501)
chr8 (200-296)||(13652132-13652228)
chr8 (200-296)||(13710775-13710871)
chr8 (192-272)||(27320225-27320304)
chr8 (210-266)||(40356798-40356854)
[»] chr6 (43 HSPs)
chr6 (192-294)||(10452419-10452521)
chr6 (191-285)||(7351676-7351770)
chr6 (155-288)||(33068626-33068759)
chr6 (162-295)||(32975857-32975990)
chr6 (192-295)||(2514611-2514714)
chr6 (164-287)||(29274295-29274417)
chr6 (195-288)||(22742278-22742371)
chr6 (197-288)||(10032485-10032576)
chr6 (164-288)||(33259698-33259821)
chr6 (214-295)||(4006645-4006726)
chr6 (164-237)||(6963172-6963245)
chr6 (164-236)||(3155057-3155129)
chr6 (168-288)||(9833162-9833282)
chr6 (192-259)||(31668779-31668846)
chr6 (229-295)||(1402942-1403008)
chr6 (189-295)||(1904726-1904827)
chr6 (189-295)||(1908959-1909060)
chr6 (192-281)||(3217262-3217351)
chr6 (207-284)||(4325377-4325454)
chr6 (162-295)||(7354083-7354216)
chr6 (162-295)||(21919953-21920086)
chr6 (164-229)||(30865355-30865420)
chr6 (229-293)||(2027466-2027530)
chr6 (191-295)||(2727914-2728017)
chr6 (173-237)||(5623060-5623124)
chr6 (207-295)||(31420882-31420970)
chr6 (164-295)||(3204600-3204731)
chr6 (195-266)||(4248870-4248941)
chr6 (192-266)||(6654523-6654598)
chr6 (191-254)||(29249382-29249445)
chr6 (192-295)||(34429748-34429851)
chr6 (207-237)||(740984-741014)
chr6 (227-288)||(281913-281974)
chr6 (200-237)||(10400186-10400223)
chr6 (200-265)||(13360652-13360717)
chr6 (164-237)||(32578066-32578139)
chr6 (259-295)||(2117379-2117415)
chr6 (200-295)||(8010274-8010369)
chr6 (204-268)||(8420282-8420346)
chr6 (211-295)||(9732404-9732488)
chr6 (222-290)||(24836262-24836330)
chr6 (206-266)||(29269819-29269879)
chr6 (181-237)||(32386215-32386271)
[»] chr5 (46 HSPs)
chr5 (167-281)||(37063146-37063260)
chr5 (194-290)||(35135725-35135821)
chr5 (161-265)||(20982223-20982327)
chr5 (189-295)||(19177385-19177491)
chr5 (162-234)||(11457002-11457074)
chr5 (162-295)||(39823179-39823313)
chr5 (165-237)||(26516180-26516252)
chr5 (162-296)||(3951497-3951628)
chr5 (199-294)||(19113176-19113271)
chr5 (164-274)||(3951873-3951983)
chr5 (206-296)||(36539669-36539759)
chr5 (201-285)||(11684341-11684423)
chr5 (163-295)||(32059647-32059777)
chr5 (166-295)||(18704094-18704223)
chr5 (200-294)||(14599362-14599458)
chr5 (192-287)||(39105372-39105468)
chr5 (162-237)||(13244597-13244672)
chr5 (162-293)||(31694398-31694528)
chr5 (164-295)||(32172534-32172665)
chr5 (164-295)||(39257445-39257575)
chr5 (162-237)||(16945097-16945174)
chr5 (162-295)||(18543254-18543388)
chr5 (200-296)||(912705-912802)
chr5 (209-274)||(7096206-7096271)
chr5 (200-285)||(29116998-29117083)
chr5 (195-296)||(32194136-32194240)
chr5 (251-295)||(10272489-10272533)
chr5 (192-295)||(12425479-12425583)
chr5 (231-295)||(14295454-14295518)
chr5 (219-295)||(16889671-16889747)
chr5 (205-273)||(24084820-24084888)
chr5 (164-236)||(31687906-31687978)
chr5 (162-257)||(29588760-29588854)
chr5 (206-268)||(1961915-1961977)
chr5 (190-284)||(37968798-37968892)
chr5 (253-295)||(41017697-41017739)
chr5 (192-248)||(10771983-10772040)
chr5 (165-234)||(11153532-11153601)
chr5 (205-274)||(29014678-29014747)
chr5 (186-285)||(36774755-36774853)
chr5 (192-237)||(40534103-40534148)
chr5 (192-248)||(4991048-4991104)
chr5 (193-229)||(8177660-8177696)
chr5 (192-295)||(9202806-9202910)
chr5 (190-294)||(9927492-9927596)
chr5 (193-237)||(40097105-40097149)
[»] chr7 (45 HSPs)
chr7 (162-268)||(31341073-31341179)
chr7 (163-295)||(49060420-49060552)
chr7 (163-295)||(27481352-27481484)
chr7 (207-281)||(45593791-45593865)
chr7 (210-295)||(3610798-3610883)
chr7 (223-295)||(5006567-5006639)
chr7 (200-295)||(5373142-5373237)
chr7 (209-296)||(33894549-33894635)
chr7 (205-288)||(35536029-35536112)
chr7 (221-295)||(36874023-36874097)
chr7 (222-295)||(1417203-1417276)
chr7 (199-283)||(27121656-27121740)
chr7 (239-295)||(45777229-45777285)
chr7 (166-237)||(39505840-39505911)
chr7 (162-237)||(39566304-39566379)
chr7 (195-293)||(5272880-5272978)
chr7 (195-237)||(27389295-27389337)
chr7 (192-237)||(1431424-1431469)
chr7 (206-295)||(9527148-9527237)
chr7 (162-295)||(28340454-28340587)
chr7 (164-248)||(2223030-2223113)
chr7 (207-286)||(7244626-7244703)
chr7 (200-287)||(991987-992074)
chr7 (217-292)||(3501027-3501102)
chr7 (195-234)||(27517969-27518008)
chr7 (200-279)||(30751434-30751513)
chr7 (162-237)||(36598437-36598512)
chr7 (192-295)||(47003996-47004099)
chr7 (195-285)||(24975816-24975906)
chr7 (207-237)||(29574717-29574747)
chr7 (163-268)||(753289-753394)
chr7 (200-237)||(2801720-2801757)
chr7 (166-295)||(5628624-5628753)
chr7 (193-266)||(8445196-8445269)
chr7 (192-257)||(26935646-26935711)
chr7 (192-288)||(30133960-30134054)
chr7 (191-296)||(30837337-30837442)
chr7 (200-237)||(39539877-39539914)
chr7 (207-248)||(45078217-45078258)
chr7 (166-206)||(1422797-1422837)
chr7 (162-234)||(5620213-5620285)
chr7 (259-295)||(24895332-24895368)
chr7 (259-295)||(24909640-24909676)
chr7 (251-295)||(31002729-31002773)
chr7 (219-295)||(45813238-45813314)
[»] chr2 (49 HSPs)
chr2 (160-295)||(3102570-3102705)
chr2 (205-295)||(37766720-37766810)
chr2 (164-237)||(11393482-11393555)
chr2 (164-237)||(11410143-11410216)
chr2 (206-295)||(17952759-17952848)
chr2 (164-279)||(18884762-18884878)
chr2 (191-295)||(28803564-28803668)
chr2 (206-295)||(1899823-1899910)
chr2 (214-296)||(25609727-25609809)
chr2 (164-293)||(31740019-31740144)
chr2 (163-265)||(33197327-33197429)
chr2 (214-295)||(10143103-10143184)
chr2 (192-296)||(10198537-10198639)
chr2 (191-287)||(18962104-18962200)
chr2 (192-284)||(35459819-35459911)
chr2 (164-295)||(11513782-11513910)
chr2 (206-295)||(37053517-37053606)
chr2 (191-283)||(43808484-43808576)
chr2 (199-291)||(3423830-3423922)
chr2 (200-295)||(3673724-3673819)
chr2 (162-257)||(10190159-10190253)
chr2 (212-295)||(28933753-28933836)
chr2 (204-286)||(9478220-9478302)
chr2 (221-287)||(9551517-9551583)
chr2 (164-295)||(5133652-5133784)
chr2 (191-296)||(28810430-28810535)
chr2 (202-283)||(33267586-33267667)
chr2 (251-296)||(35485885-35485930)
chr2 (163-232)||(43635221-43635290)
chr2 (163-295)||(4550657-4550789)
chr2 (170-286)||(31461325-31461441)
chr2 (216-295)||(9878740-9878819)
chr2 (224-295)||(23143036-23143107)
chr2 (224-295)||(23554826-23554897)
chr2 (222-293)||(29430695-29430765)
chr2 (208-295)||(33944530-33944617)
chr2 (162-288)||(1160809-1160929)
chr2 (209-295)||(9877997-9878083)
chr2 (208-266)||(12970925-12970983)
chr2 (218-288)||(13866824-13866894)
chr2 (213-295)||(35755560-35755642)
chr2 (204-274)||(37033965-37034035)
chr2 (214-295)||(1646945-1647026)
chr2 (191-294)||(25790036-25790137)
chr2 (251-295)||(33942118-33942162)
chr2 (191-283)||(34339031-34339123)
chr2 (255-295)||(37276718-37276758)
chr2 (251-295)||(37292405-37292449)
chr2 (186-266)||(38239638-38239718)
[»] chr4 (51 HSPs)
chr4 (192-295)||(24443947-24444050)
chr4 (164-294)||(24193466-24193596)
chr4 (192-295)||(49219048-49219151)
chr4 (201-295)||(21157686-21157780)
chr4 (193-274)||(47970228-47970309)
chr4 (198-293)||(2980526-2980626)
chr4 (192-283)||(22684586-22684677)
chr4 (205-295)||(24160553-24160643)
chr4 (166-236)||(46053583-46053653)
chr4 (206-288)||(54325102-54325184)
chr4 (200-285)||(19422335-19422420)
chr4 (206-295)||(30207629-30207717)
chr4 (163-295)||(24929373-24929505)
chr4 (165-295)||(8422897-8423025)
chr4 (166-237)||(43932316-43932387)
chr4 (192-295)||(46796927-46797030)
chr4 (211-293)||(4071811-4071892)
chr4 (163-263)||(4243220-4243321)
chr4 (193-283)||(4663766-4663856)
chr4 (199-237)||(9843782-9843820)
chr4 (214-296)||(50745931-50746013)
chr4 (192-285)||(55437354-55437445)
chr4 (219-292)||(24160926-24160999)
chr4 (207-280)||(36734817-36734890)
chr4 (222-295)||(42321937-42322010)
chr4 (206-295)||(45128368-45128457)
chr4 (207-264)||(51555956-51556013)
chr4 (207-274)||(4191663-4191731)
chr4 (220-296)||(27043887-27043963)
chr4 (251-295)||(30581735-30581779)
chr4 (162-237)||(485960-486035)
chr4 (192-286)||(23676625-23676720)
chr4 (206-285)||(25487613-25487692)
chr4 (201-264)||(50742923-50742986)
chr4 (200-287)||(53155182-53155267)
chr4 (206-257)||(55994283-55994334)
chr4 (162-280)||(5219573-5219691)
chr4 (194-284)||(44319861-44319950)
chr4 (233-295)||(49085939-49086001)
chr4 (199-237)||(54414865-54414903)
chr4 (227-288)||(27623579-27623640)
chr4 (219-296)||(30338649-30338726)
chr4 (205-282)||(32724041-32724118)
chr4 (192-248)||(45516665-45516722)
chr4 (192-280)||(3020344-3020432)
chr4 (223-295)||(11802475-11802546)
chr4 (219-287)||(21593078-21593145)
chr4 (207-287)||(30024624-30024704)
chr4 (210-246)||(41603498-41603534)
chr4 (191-295)||(46415850-46415954)
chr4 (223-295)||(55870399-55870471)
[»] chr3 (51 HSPs)
chr3 (206-281)||(22232749-22232824)
chr3 (164-295)||(43116486-43116617)
chr3 (166-295)||(32555039-32555169)
chr3 (205-297)||(28779278-28779370)
chr3 (219-297)||(20192662-20192740)
chr3 (192-285)||(41028919-41029012)
chr3 (248-296)||(19679385-19679433)
chr3 (207-295)||(27792796-27792884)
chr3 (212-295)||(12923383-12923466)
chr3 (162-273)||(20504091-20504202)
chr3 (180-237)||(28842973-28843030)
chr3 (161-295)||(23530242-23530378)
chr3 (162-285)||(36199997-36200118)
chr3 (164-231)||(2519583-2519650)
chr3 (195-274)||(3757960-3758039)
chr3 (206-281)||(33307652-33307727)
chr3 (221-296)||(40122810-40122884)
chr3 (172-295)||(43038765-43038887)
chr3 (207-274)||(51278236-51278303)
chr3 (223-285)||(1395611-1395673)
chr3 (207-293)||(32703062-32703148)
chr3 (206-287)||(38462204-38462285)
chr3 (192-295)||(1816491-1816595)
chr3 (189-237)||(41724117-41724165)
chr3 (206-273)||(659903-659965)
chr3 (241-292)||(13481253-13481304)
chr3 (207-274)||(16790435-16790502)
chr3 (208-295)||(37788786-37788872)
chr3 (225-295)||(24235741-24235811)
chr3 (192-294)||(36101477-36101579)
chr3 (192-294)||(36139787-36139889)
chr3 (204-266)||(44374731-44374793)
chr3 (227-285)||(49586984-49587042)
chr3 (192-257)||(16790184-16790249)
chr3 (200-281)||(20349548-20349629)
chr3 (164-217)||(20874436-20874489)
chr3 (200-257)||(25964359-25964416)
chr3 (193-266)||(34317998-34318071)
chr3 (258-295)||(48807683-48807720)
chr3 (193-274)||(53457287-53457368)
chr3 (205-295)||(20195087-20195174)
chr3 (193-237)||(20502192-20502236)
chr3 (259-295)||(20807076-20807112)
chr3 (200-248)||(25185910-25185958)
chr3 (211-290)||(33434069-33434148)
chr3 (260-296)||(35246648-35246684)
chr3 (192-248)||(36445641-36445697)
chr3 (206-266)||(39971242-39971302)
chr3 (205-265)||(41159031-41159091)
chr3 (192-236)||(42754550-42754594)
chr3 (198-274)||(44284137-44284213)
[»] scaffold0590 (1 HSPs)
scaffold0590 (163-287)||(1140-1264)
[»] scaffold0275 (1 HSPs)
scaffold0275 (163-287)||(2711-2835)
[»] scaffold0024 (1 HSPs)
scaffold0024 (162-295)||(27455-27588)
[»] chr1 (52 HSPs)
chr1 (193-294)||(7273998-7274099)
chr1 (194-293)||(37841908-37842008)
chr1 (186-262)||(44236622-44236698)
chr1 (200-283)||(870962-871045)
chr1 (164-287)||(17420084-17420207)
chr1 (167-294)||(30259546-30259673)
chr1 (164-285)||(50764441-50764564)
chr1 (193-287)||(43372025-43372119)
chr1 (186-295)||(40304112-40304221)
chr1 (169-237)||(52013783-52013851)
chr1 (166-285)||(29793991-29794109)
chr1 (208-287)||(45107548-45107626)
chr1 (222-292)||(15360833-15360903)
chr1 (221-295)||(29007774-29007848)
chr1 (162-295)||(15437842-15437975)
chr1 (200-289)||(45990122-45990211)
chr1 (162-294)||(4019651-4019782)
chr1 (211-295)||(5421978-5422061)
chr1 (160-288)||(6031544-6031670)
chr1 (186-285)||(23895239-23895338)
chr1 (193-295)||(4200139-4200241)
chr1 (198-287)||(4256108-4256198)
chr1 (192-273)||(9507080-9507162)
chr1 (200-274)||(23373369-23373443)
chr1 (199-237)||(43112870-43112908)
chr1 (205-274)||(48282055-48282125)
chr1 (198-295)||(49516984-49517082)
chr1 (205-287)||(52286600-52286682)
chr1 (210-295)||(17269177-17269262)
chr1 (209-286)||(21002079-21002156)
chr1 (200-273)||(33339500-33339573)
chr1 (222-295)||(36151563-36151636)
chr1 (194-279)||(37818375-37818460)
chr1 (225-294)||(38578469-38578538)
chr1 (167-248)||(38651514-38651595)
chr1 (214-287)||(45999354-45999427)
chr1 (192-237)||(47885124-47885169)
chr1 (222-287)||(48830142-48830207)
chr1 (191-232)||(49282825-49282866)
chr1 (193-286)||(50998462-50998555)
chr1 (207-295)||(1255489-1255577)
chr1 (164-287)||(4276702-4276826)
chr1 (251-295)||(10581135-10581179)
chr1 (200-248)||(13037781-13037829)
chr1 (200-243)||(15942249-15942293)
chr1 (164-224)||(17631223-17631283)
chr1 (192-284)||(28768005-28768097)
chr1 (239-295)||(30371104-30371160)
chr1 (251-287)||(32958620-32958656)
chr1 (164-268)||(43029486-43029589)
chr1 (207-287)||(44032065-44032145)
chr1 (251-295)||(45205036-45205080)
[»] scaffold0508 (1 HSPs)
scaffold0508 (192-295)||(9833-9936)
[»] scaffold0153 (2 HSPs)
scaffold0153 (162-288)||(6563-6688)
scaffold0153 (162-288)||(13583-13708)
[»] scaffold0015 (1 HSPs)
scaffold0015 (164-294)||(69002-69131)
[»] scaffold0654 (1 HSPs)
scaffold0654 (206-295)||(6695-6784)
[»] scaffold0014 (1 HSPs)
scaffold0014 (206-295)||(116614-116703)


Alignment Details
Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 28769691 - 28769397
Alignment:
Q  1 tcaataacttgaaatcaggttcctgataaacaagatcatcaaatagttcaagtagagctaatcataaatcagtcatagactaaaaagcaacaattctctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  28769691 tcaataacttgaaatcaggttcctgataaacaagatcatcaaatagttcaagtagagctaatcataaataagtcatagactaacaagcaacaattctctt 28769592  T
Q  101 attgcacctttctgattataaacaacacatcaccaggtttagatattttgaagattctagacctgtttggataaacagctaaatcaagcatttatagcat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28769591 attgcacctttctgattataaacaacacatcaccaggtttagatattttgaagattctagacctgtttggataaacagctaaatcaagcatttatagcat 28769492  T
Q  201 aagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  28769491 aagtgcttatcatataaatgcttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgtttt 28769397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 35869746 - 35869849
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    ||||||||||||  |||||||||||| | ||||||||||||| |||  || |||||| |||||||| || |||||| |||||| ||||||||||||||||    
T  35869746 ttatagcataagcacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttg 35869845  T
Q  292 tttt 295  Q
    ||||    
T  35869846 tttt 35869849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 285
Target Start/End: Complemental strand, 3645978 - 3645884
Alignment:
Q  191 tttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||  ||||| ||| |||||||  || ||||||||||||| ||||||||||    
T  3645978 tttatagcataagtgtttatcatataagtgcttgtgtataagctatttctataagaaaatataaaacaaaatcaaactattttcatataagctat 3645884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 295
Target Start/End: Original strand, 31884477 - 31884606
Alignment:
Q  166 tttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaa 265  Q
    |||||||||||| || ||| ||||| |||||||||||| |||||||||| || ||| |||||||||| ||||  ||||||||| |||||||| || |  |    
T  31884477 tttggataaacaactcaattaagcacttatagcataagcgcttatcatacaagtgcatatgtataagttatttctataacaaaatataaaatcaaattga 31884576  T
Q  266 actattttcttataagctataagttgtttt 295  Q
    | | ||||| |||||||||||| |||||||    
T  31884577 attgttttcatataagctataaattgtttt 31884606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 39392828 - 39392746
Alignment:
Q  186 aagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaact 268  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||| |||||  |||||||||  ||||||| ||||||||||    
T  39392828 aagcatttatagcataagtgcttatcatataagtggctatgtataaactatttctataacaaaagataaaataaagtcaaact 39392746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 295
Target Start/End: Complemental strand, 29592722 - 29592590
Alignment:
Q  163 ctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagt 262  Q
    ||||||||||||||| || | | | ||||||||||||||||| |||||||||||| ||||| |||||||||||||| ||     ||  ||||||| ||||    
T  29592722 ctgtttggataaacaacttagttatgcatttatagcataagttcttatcatataagtgcttttgtataagctattcttacggtgaaagataaaataaagt 29592623  T
Q  263 caaactattttcttataagctataagttgtttt 295  Q
     ||| | ||| ||||||||||||||| ||||||    
T  29592622 aaaattgtttccttataagctataagctgtttt 29592590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 31875750 - 31875675
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||||||||||| ||| || ||| |||| ||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  31875750 cctgtttggatagacaacttaatgaagcgtttatagcataagcgcttatcatataagtgcttatctataagctatt 31875675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 7026610 - 7026736
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||||||| || ||| ||||||||| |||||||    ||||||||||| |||||||| |||||||| |  |||||||||  ||||||| |||    
T  7026610 cctgtttggataaacaacttaattaagcatttacagcataaacatttatcatataagtgcttatgcataagctactgttataacaaaagataaaataaag 7026709  T
Q  262 tcaaactattttcttataagctataag 288  Q
    | ||| | ||||| |||||| ||||||    
T  7026710 taaaattgttttcatataaggtataag 7026736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 14482111 - 14482185
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaa 266  Q
    ||||||||| |||||||||||||||| ||||||||||||| |||||  |||||||||  ||||||| ||||||||    
T  14482111 ttatagcattagtgcttatcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaa 14482185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 287
Target Start/End: Complemental strand, 6918346 - 6918245
Alignment:
Q  186 aagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    ||||| ||||| | ||||||||||| |||||| || || | ||||||||||| |||||| |||  ||||||| |||||||||| |||||| |||||||||    
T  6918346 aagcacttataacttaagtgcttataatataagtgtttgtatataagctatttatataataaaagataaaataaagtcaaactgttttctaataagctat 6918247  T
Q  286 aa 287  Q
    ||    
T  6918246 aa 6918245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 295
Target Start/End: Original strand, 10727100 - 10727209
Alignment:
Q  186 aagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    |||||||||||||||||||| | ||||||||| |||||||| ||||||||||  |||| ||||  || |||| || ||||| | |||||  ||||| |||    
T  10727100 aagcatttatagcataagtgttcatcatataagtgcttatgcataagctatttctatagcaaaagatgaaataaattcaaagtgttttcacataagttat 10727199  T
Q  286 aagttgtttt 295  Q
    ||||||||||    
T  10727200 aagttgtttt 10727209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 34788581 - 34788493
Alignment:
Q  199 ataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    ||||| |||||||||||||||||||| ||||||||||||  ||| || ||  ||||||| |||||||||| ||| | ||||||||||||    
T  34788581 ataagcgcttatcatataaatgcttacgtataagctatttttatgaccaaagataaaataaagtcaaactgtttccatataagctataa 34788493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 6918915 - 6918985
Alignment:
Q  167 ttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||||||||||||| | | |||  | ||||||||||||| ||||||||||| |||||||||||||||||||    
T  6918915 ttggataaacagcttacttaagtgtctatagcataagtgtttatcatataagtgcttatgtataagctatt 6918985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 29699163 - 29699266
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    ||||||||||| |  |||||||||||||||||||||| ||| ||||  |||||||||  ||||||| |||||||| | || || | |||| |||||| ||    
T  29699163 ttatagcataaatatttatcatataaatgcttatgtacaagttatttctataacaaaagataaaataaagtcaaaatgttgtcatctaagttataagctg 29699262  T
Q  292 tttt 295  Q
    ||||    
T  29699263 tttt 29699266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 274
Target Start/End: Original strand, 40357777 - 40357890
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataag---tgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaa 260  Q
    ||||||||||||||||| ||| ||||  ||| |||||||    |||||||||||||| |  ||||||||||||| || ||||||||||  ||||||| ||    
T  40357777 tgtttggataaacagcttaattaagcccttagagcataataaatgcttatcatataagtatttatgtataagctcttgatataacaaaagataaaataaa 40357876  T
Q  261 gtcaaactattttc 274  Q
    || ||| |||||||    
T  40357877 gtaaaattattttc 40357890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 294
Target Start/End: Original strand, 4558679 - 4558809
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc 263  Q
    |||||||||||||| || ||| | ||  |||||||||||  | |||| || ||| || ||||||||||||||||  ||||| |||  ||||||| ||||     
T  4558679 tgtttggataaacaacttaattacgcgcttatagcataaacgtttattatgtaagtgtttatgtataagctatttctataataaaagataaaataaagtt 4558778  T
Q  264 aaactattttcttataagctataagttgttt 294  Q
    ||| ||||||| |||| |||||||| |||||    
T  4558779 aaattattttcatatatgctataagctgttt 4558809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 36338039 - 36337965
Alignment:
Q  214 ataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataag 288  Q
    |||| |||||| ||||||| ||||  ||||||||||||| |||| |||| ||||||||| | |||||||||||||    
T  36338039 ataagtgcttaagtataagatatttttataacaaattatcaaataaagttaaactatttacgtataagctataag 36337965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 42597319 - 42597413
Alignment:
Q  201 aagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||  ||||| | |||||||||||||||||  |||||||||  ||||||| |||| ||| | ||||| |  |||||||||||||||||    
T  42597319 aagtgcttatgctataagtacttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgtttt 42597413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 25869398 - 25869361
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  25869398 taagtgcttttcatataaatgcttatgtataagctatt 25869361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 30013142 - 30013230
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||| |||||| ||||||||| |||||||||  |||||||||   | ||||||||||||||| ||| | ||||||||||||| ||||||    
T  30013142 cttattatataagtgcttatgtttaagctattt-tataacaaaaggtcaaattaagtcaaactgtttccatataagctataagctgtttt 30013230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 295
Target Start/End: Original strand, 34770795 - 34770904
Alignment:
Q  186 aagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    ||||||||||||||| ||  | |||||| ||| |||||||||| || |||||   || |||||  ||||||| |||||||| | ||||| | ||||||||    
T  34770795 aagcatttatagcatgagaacctatcatgtaagtgcttatgtaaaaactatttccattacaaaagataaaataaagtcaaattgttttcatttaagctat 34770894  T
Q  286 aagttgtttt 295  Q
    ||||||||||    
T  34770895 aagttgtttt 34770904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 243
Target Start/End: Complemental strand, 35220888 - 35220811
Alignment:
Q  166 tttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatata 243  Q
    ||||||||||||||| ||| ||  | ||| || ||||||| ||||||||||| |||||||||||||| |||| |||||    
T  35220888 tttggataaacagcttaattaaatacttacaggataagtgattatcatataagtgcttatgtataagttattaatata 35220811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 294
Target Start/End: Original strand, 1117229 - 1117356
Alignment:
Q  166 tttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaa 265  Q
    |||||||| ||| || ||| ||| | ||||| ||| |||||||||||||||| || |||||| |||| | ||  |||||| ||| |||||||  || |||    
T  1117229 tttggatagacaacttaattaagtacttatatcattagtgcttatcatataagtgattatgtgtaagttgtttctataacgaatgataaaatacaggcaa 1117328  T
Q  266 actattttcttataagctataagttgttt 294  Q
    |  |||||| |||||||||||||||||||    
T  1117329 a-aattttcatataagctataagttgttt 1117356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 266
Target Start/End: Complemental strand, 2364664 - 2364560
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||||||| |  | | ||||  |||||||||||||| ||||||||||| |  ||||||||| ||||||  |||| ||||  ||||||| |||    
T  2364664 cctgtttggataaacaacatagttaagcgcttatagcataagtgtttatcatataactatttatgtatacgctatttttatagcaaaagataaaataaag 2364565  T
Q  262 tcaaa 266  Q
    |||||    
T  2364564 tcaaa 2364560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 6966817 - 6966861
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctat 236  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||    
T  6966817 ttataacataagcacttatcatataaatgcttatgtataagctat 6966861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 296
Target Start/End: Original strand, 10383751 - 10383842
Alignment:
Q  204 tgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgttttt 296  Q
    ||||||| || |||| ||||||||||||||| ||  ||||| |||| |||||| ||| ||||||| ||||| || |||||||||| |||||||    
T  10383751 tgcttattatgtaaacgcttatgtataagctgtttttataataaatgataaaa-taaatcaaactgttttcgtaaaagctataagctgttttt 10383842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 11119188 - 11119084
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc 263  Q
    |||||||||||||| ||  || |||  |||||||||||| | | ||||||||||  ||||||||||| | ||||  |||||||||  ||||||| |||||    
T  11119188 tgtttggataaacaacttgattaagtgtttatagcataactacatatcatataatcgcttatgtatacgatatttctataacaaaagataaaataaagtc 11119089  T
Q  264 aaact 268  Q
    |||||    
T  11119088 aaact 11119084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 285
Target Start/End: Original strand, 20672651 - 20672772
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||||||  || ||| |||  ||||||| | ||  ||||||||||||| ||||||||| || ||  || ||||||||||  ||||||| |||    
T  20672651 cctgtttggataaacgacttaattaagagtttatagtagaaaagcttatcatataagtgcttatgtgtatgccctttatataacaaaagataaaataaag 20672750  T
Q  262 tcaaactattttcttataagctat 285  Q
    ||||||| |||  |||||||||||    
T  20672751 tcaaactgttt--ttataagctat 20672772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 280
Target Start/End: Original strand, 26215433 - 26215493
Alignment:
Q  220 gcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataa 280  Q
    ||||||||||||||||||  |||||||||  ||||||| |||| ||||||||||| |||||    
T  26215433 gcttatgtataagctatttctataacaaaagataaaataaagttaaactattttcgtataa 26215493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 29973017 - 29973093
Alignment:
Q  219 tgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| |||||||||||  | ||||| |   |||||| ||||||||||||||||  |||||||||||||||||||    
T  29973017 tgcttatatataagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataagttgtttt 29973093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 296
Target Start/End: Complemental strand, 35453784 - 35453680
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    |||||||||||| |||| |||||||| | ||||| ||||| || ||  || ||||||  ||||||| |||| |||||| |||| |||||| |||| ||||    
T  35453784 ttatagcataagcgcttgtcatataagtacttatatataatctgtttctacaacaaaagataaaataaagttaaactagtttcatataagttataggttg 35453685  T
Q  292 ttttt 296  Q
    |||||    
T  35453684 ttttt 35453680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 1470985 - 1470914
Alignment:
Q  224 atgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||||||  ||||| |||  ||||||| |||||||| || |||| ||||||||||||| ||||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgtttt 1470914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 2107513 - 2107442
Alignment:
Q  166 tttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||||||||||| || ||| |||| |||||||| || | ||||||||||||| | |||||||||||| ||||    
T  2107513 tttggataaacaacttaattaagcgtttatagcttatgcgcttatcatataagttcttatgtataagttatt 2107442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 8629025 - 8629109
Alignment:
Q  199 ataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    ||||||| ||||||||||| ||||||| |||||||||||  |||||||||  |||||||| ||| ||| | ||||  ||||||||||    
T  8629025 ataagtgtttatcatataagtgcttatttataagctatttctataacaaa--ataaaattgagttaaaatgtttttatataagctat 8629109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 12972739 - 12972810
Alignment:
Q  166 tttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||||| ||||| || ||| ||||  ||||||||||||   ||||||||||| |||||||||||||||||||    
T  12972739 tttggacaaacaacttaattaagcgcttatagcataagcatttatcatataagtgcttatgtataagctatt 12972810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 38561607 - 38561738
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc 263  Q
    ||||||||||||||||| ||  || ||  || | ||| || |||||| |||||| ||  ||| |||||| |||| ||||||||||  ||||||| |||||    
T  38561607 tgtttggataaacagcttaactaaccacatacaacattagcgcttattatataagtgtctatatataagttatttatataacaaaagataaaataaagtc 38561706  T
Q  264 aaactattttcttataagctataagttgtttt 295  Q
    ||||||||||  | ||  ||||||||||||||    
T  38561707 aaactatttttatctatactataagttgtttt 38561738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 2833492 - 2833446
Alignment:
Q  192 ttatagcataagtgcttatcat-ataaatgcttatgtataagctatt 237  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||||    
T  2833492 ttatagcataagtgcttatcatgataagtgcttatgaataagctatt 2833446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 2840267 - 2840313
Alignment:
Q  192 ttatagcataagtgcttatcat-ataaatgcttatgtataagctatt 237  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||||    
T  2840267 ttatagcataagtgcttatcatgataagtgcttatgaataagctatt 2840313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 2844954 - 2845000
Alignment:
Q  192 ttatagcataagtgcttatcat-ataaatgcttatgtataagctatt 237  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||||    
T  2844954 ttatagcataagtgcttatcatgataagtgcttatgaataagctatt 2845000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 8536239 - 8536153
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaa 248  Q
    |||||||||||||||| || |||  ||   ||||| ||| | ||||| |||||||| |||||||||||||||||||  |||||||||    
T  8536239 cctgtttggataaacaacttaattgagtgcttataccatgaatgcttgtcatataagtgcttatgtataagctatttctataacaaa 8536153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 26820142 - 26820204
Alignment:
Q  226 gtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataag 288  Q
    ||||||| ||||  |||||||||  ||||||| ||||||||||||||| |||||| |||||||    
T  26820142 gtataagttatttctataacaaaagataaaataaagtcaaactattttgttataaactataag 26820204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 287
Target Start/End: Complemental strand, 38036272 - 38036178
Alignment:
Q  193 tatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    ||||||||||| ||||||  ||||| ||||||||||||| ||||| || |||||||  ||||||| || ||||| | ||||  | ||||||||||    
T  38036272 tatagcataagcgcttattctataagtgcttatgtataaactatttatttaacaaaaaataaaataaattcaaattgtttttgtgtaagctataa 38036178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 11056814 - 11056725
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||| || | ||| || |||||||  |||||||||    ||||| ||||  |||||||||| ||||||||||||||||||||    
T  11056814 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagttgaactattttcatataagctataagttgtttt 11056725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 26716627 - 26716554
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagcta 235  Q
    |||||||  ||||||| |||||| |||||  ||||||||||   ||||| |||||| |||||||||||||||||    
T  26716627 cctgttttaataaacaactaaattaagcacctatagcataaacacttattatataagtgcttatgtataagcta 26716554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 295
Target Start/End: Complemental strand, 27728188 - 27728079
Alignment:
Q  186 aagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    ||||| ||||||||||| | ||||| | |||| | | |||||| | ||||||  ||||| |||  ||||||| |||||||||||||||| |||||  |||    
T  27728188 aagcaattatagcataaatacttataacataactacgtatgtacaggctatttctataaaaaaagataaaataaagtcaaactattttcatataaagtat 27728089  T
Q  286 aagttgtttt 295  Q
     |||||||||    
T  27728088 tagttgtttt 27728079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 295
Target Start/End: Complemental strand, 35298624 - 35298535
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttc-ttataagctataagttgtttt 295  Q
    ||||||||||| |||||||||||||||||||    |||||||  ||||||| ||| |||||  |||||  ||||| ||||||||||||||    
T  35298624 ttatcatataagtgcttatgtataagctatttcagtaacaaaagataaaataaagccaaacagttttcaatataaactataagttgtttt 35298535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 41933400 - 41933335
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtat 229  Q
    ||||||||||||||| | ||| |||| |||||||||| |  ||||||||||||| |||||| ||||    
T  41933400 tgtttggataaacagtttaataaagcgtttatagcatcatagcttatcatataagtgcttaagtat 41933335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 42370508 - 42370427
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    ||||||||||   |||||||||||||||| |   | ||||||| |||||| | ||||||||||||||| |||| ||||||||    
T  42370508 cttatcatatgcgtgcttatgtataagctgtatctgtaacaaaatataaagtaaagtcaaactatttttttatgagctataa 42370427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 234
Target Start/End: Original strand, 6526361 - 6526389
Alignment:
Q  206 cttatcatataaatgcttatgtataagct 234  Q
    |||||||||||||||||||||||||||||    
T  6526361 cttatcatataaatgcttatgtataagct 6526389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 6864561 - 6864517
Alignment:
Q  251 ataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| |||||||||||||||| | |||| |||||||||||||    
T  6864561 ataaaataaagtcaaactattttcatgtaagttataagttgtttt 6864517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 10114398 - 10114501
Alignment:
Q  192 ttatagcataagtgcttatcat-ataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagtt 290  Q
    |||||||||||||| |||| || |||| |||||||||||||||||||  |||| ||||  |||||| |||||  || | ||||  ||||||||||||| |    
T  10114398 ttatagcataagtggttatgatgataagtgcttatgtataagctatttctatagcaaaagataaaa-taagttgaattgttttggtataagctataagct 10114496  T
Q  291 gtttt 295  Q
    |||||    
T  10114497 gtttt 10114501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 296
Target Start/End: Original strand, 13652132 - 13652228
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgttttt 296  Q
    |||||| ||||||| ||| |||||||||||||||||||  |||| ||||  ||  ||| |||| ||| | ||||| |||||| ||||| ||||||||    
T  13652132 taagtgtttatcatctaagtgcttatgtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgttttt 13652228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 296
Target Start/End: Original strand, 13710775 - 13710871
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgttttt 296  Q
    |||||| ||||||| ||| |||||||||||||||||||  |||| ||||  ||  ||| |||| ||| | ||||| |||||| ||||| ||||||||    
T  13710775 taagtgtttatcatctaagtgcttatgtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcatataagttataaattgttttt 13710871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 272
Target Start/End: Original strand, 27320225 - 27320304
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattt 272  Q
    |||||||||||   ||||||| |||| |||||| ||||||||||||| |||| ||||  || |||| ||||||||||||||    
T  27320225 ttatagcataaacacttatcacataagtgcttacgtataagctattcctatagcaaaagat-aaataaagtcaaactattt 27320304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 40356798 - 40356854
Alignment:
Q  210 tcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaa 266  Q
    |||||||| ||||||| ||||||||||| |||||| |||  ||||||| ||||||||    
T  40356798 tcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaaa 40356854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 192 - 294
Target Start/End: Complemental strand, 10452521 - 10452419
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    ||||||||||||||  |||||||| | |||||||||||||||||||  ||||||||| |||||||| || ||||||||||||| ||||||||||||||||    
T  10452521 ttatagcataagtggctatcatatcagtgcttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataagttg 10452422  T
Q  292 ttt 294  Q
    |||    
T  10452421 ttt 10452419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 285
Target Start/End: Complemental strand, 7351770 - 7351676
Alignment:
Q  191 tttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||| |||||| ||| |||||||| |||| ||||| ||||| ||||||||||    
T  7351770 tttatagcataagctcttatcatataaatgcttatgtataaactatttatataataaactataaaataaagttaaactgttttcatataagctat 7351676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 288
Target Start/End: Complemental strand, 33068759 - 33068626
Alignment:
Q  155 ttctagacctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataa 254  Q
    |||||| ||||||||||| ||||||| ||| |||  ||||||||||||| |||||||| ||||||||||||||||||| ||||  |||||||||  ||||    
T  33068759 ttctagccctgtttggatgaacagcttaattaagtgtttatagcataagcgcttatcaaataaatgcttatgtataagttatttctataacaaaagataa 33068660  T
Q  255 aattaagtcaaactattttcttataagctataag 288  Q
    ||| |  ||||||| |||||  ||||| ||||||    
T  33068659 aataatatcaaactgttttcaaataagatataag 33068626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 295
Target Start/End: Original strand, 32975857 - 32975990
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    ||||||| |||||||| || ||| |||| ||||||||||||| |||| |||||||| || ||||||||||| ||||  | ||||||| |||||||| |||    
T  32975857 cctgtttagataaacaacttaattaagcgtttatagcataagcgcttctcatataagtgtttatgtataagttatttctgtaacaaaatataaaataaag 32975956  T
Q  262 tcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| |||   || |||| ||||||||||||    
T  32975957 tcaaactgtttcaatagaagcaataagttgtttt 32975990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 2514611 - 2514714
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    ||||||||||| |||||||||| ||| |||||||||||||||||||  ||||| |||  ||||||| ||||||||||| |||  ||| |||||||||||     
T  2514611 ttatagcataaatgcttatcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatatgagctataagtta 2514710  T
Q  292 tttt 295  Q
    ||||    
T  2514711 tttt 2514714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 287
Target Start/End: Complemental strand, 29274417 - 29274295
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc 263  Q
    ||||||||||| ||||| ||| ||||| ||| | || |||| ||||||||| ||||||||||||||||||||||  |||| ||||  ||||||| |||||    
T  29274417 tgtttggataa-cagcttaattaagcacttacaacacaagttcttatcatagaaatgcttatgtataagctatttctatagcaaaagataaaataaagtc 29274319  T
Q  264 aaactattttcttataagctataa 287  Q
    ||| | ||||| ||||||||||||    
T  29274318 aaattgttttcatataagctataa 29274295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 22742278 - 22742371
Alignment:
Q  195 tagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataag 288  Q
    ||||||||| ||||||| ||||| | ||||| |||||||||||  |||||||||  ||||||| |||||||| | ||||| |||||||||||||    
T  22742278 tagcataagcgcttatcgtataagttcttatctataagctatttgtataacaaaggataaaataaagtcaaattgttttcatataagctataag 22742371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 288
Target Start/End: Original strand, 10032485 - 10032576
Alignment:
Q  197 gcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataag 288  Q
    |||||||| ||||||||||||||| ||||||||||||||||  ||||||||    | |||| ||| ||||||| |||| |||||||||||||    
T  10032485 gcataagtacttatcatataaatgtttatgtataagctatttttataacaataggtgaaataaaggcaaactaatttcatataagctataag 10032576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 33259698 - 33259821
Alignment:
Q  164 tgtttggataaacagc-taaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagt 262  Q
    |||||||||||||||| ||| ||||||  |||||  ||||| ||||  ||||||| |||||||||||||||||||  |||||||||  ||||| | ||||    
T  33259698 tgtttggataaacagcctaattcaagc--ttataagataagagctttacatataagtgcttatgtataagctatttttataacaaaagataaattgaagt 33259795  T
Q  263 caaactattttcttataagctataag 288  Q
    || ||| ||||| |||| ||||||||    
T  33259796 catactgttttcctatatgctataag 33259821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 295
Target Start/End: Original strand, 4006645 - 4006726
Alignment:
Q  214 ataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||| |||||||| ||||| ||||  |||||||||| ||||||| |||||||| | ||||  ||||||||||||||||||||    
T  4006645 ataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgtttt 4006726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 6963245 - 6963172
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||||||||||||| |||||| ||||| |||||| ||   |||||||||||||  |||||||||||||||||||    
T  6963245 tgtttggataaacaactaaattaagcacttatagtatggatgcttatcatatatttgcttatgtataagctatt 6963172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 3155057 - 3155129
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctat 236  Q
    |||||||||||||| || | | ||||  |||||||||||| | |||||||||||||| |||||||||||||||    
T  3155057 tgtttggataaacaacttatttaagcgcttatagcataagcgtttatcatataaatggttatgtataagctat 3155129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 288
Target Start/End: Complemental strand, 9833282 - 9833162
Alignment:
Q  168 tggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaac 267  Q
    |||||||||| || ||| |||  |||||| |||||| | ||||||||||| ||||| | |||||| ||||  ||| ||||   ||||||| |||||||||    
T  9833282 tggataaacaacttaattaagtgtttataacataagcgtttatcatataagtgcttctctataagatatttctattacaataaataaaataaagtcaaac 9833183  T
Q  268 tattttcttataagctataag 288  Q
    | ||||||||||||| |||||    
T  9833182 tgttttcttataagcaataag 9833162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 31668846 - 31668779
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaatta 259  Q
    ||||||||||||   ||||||||||| |||||||||||||||||||  |||||||||  |||||||||    
T  31668846 ttatagcataagcaattatcatataagtgcttatgtataagctatttctataacaaaacataaaatta 31668779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 295
Target Start/End: Original strand, 1402942 - 1403008
Alignment:
Q  229 taagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||  |||||||||  ||||||| |||| ||||||||||| |||||||||||| |||||||    
T  1402942 taagctatttctataacaaaagataaaataaagttaaactattttcatataagctataaattgtttt 1403008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 1904726 - 1904827
Alignment:
Q  189 catttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataag 288  Q
    |||||||||||||| |||||||| ||| | || ||||||||||||||||     ||| || |||||||| |||||||| ||||||  |||||||||||      
T  1904726 catttatagcataaatgcttatcgtatgagtgattatgtataagctatt-----aactaaatataaaataaagtcaaattatttttatataagctataga 1904820  T
Q  289 ttgtttt 295  Q
    |||||||    
T  1904821 ttgtttt 1904827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 1908959 - 1909060
Alignment:
Q  189 catttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataag 288  Q
    |||||||||||||| |||||||| ||| | || ||||||||||||||||     ||| || |||||||| |||||||| ||||||  |||||||||||      
T  1908959 catttatagcataaatgcttatcgtatgagtgattatgtataagctatt-----aactaaatataaaataaagtcaaattatttttatataagctataga 1909053  T
Q  289 ttgtttt 295  Q
    |||||||    
T  1909054 ttgtttt 1909060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 281
Target Start/End: Complemental strand, 3217351 - 3217262
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataag 281  Q
    |||||| ||||| | ||||||||||| |||||||||||||||||||  | ||| | |  ||||||| |||||||| ||||||| ||||||    
T  3217351 ttatagtataagcgattatcatataagtgcttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcatataag 3217262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 284
Target Start/End: Complemental strand, 4325454 - 4325377
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagcta 284  Q
    ||||||||||| ||||||||| |||| ||||  ||||| |||| |||||||  || |||||||||||| |||||||||    
T  4325454 ttatcatataagtgcttatgtctaagttatttctataataaatgataaaatagagacaaactattttcatataagcta 4325377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 295
Target Start/End: Original strand, 7354083 - 7354216
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||||||||||   | ||||  ||||||||||| ||||| ||||| || |  | |||||||| |||||  |||||||||  ||||||| ||     
T  7354083 cctgtttggataaacagctttgttaagcgcttatagcataaatgcttttcatacaagttttcatgtataaactatttctataacaaaagataaaataaaa 7354182  T
Q  262 tcaaactattttcttataagctataagttgtttt 295  Q
    || |||||||||| |||||| || ||| ||||||    
T  7354183 tcgaactattttcatataagatacaagctgtttt 7354216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 295
Target Start/End: Original strand, 21919953 - 21920086
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||||  | || ||| ||||  ||||||||||||| |||||||||||| |||||||| |||| |  ||  | ||||||| || ||||| ||     
T  21919953 cctgtttggataagaaacttaattaagcgcttatagcataagtacttatcatataagtgcttatgcataaacattttttgtaacaaaatagaaaataaat 21920052  T
Q  262 tcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||||| | | | ||||||| ||||||    
T  21920053 tcaaactattttcatgttaactataagctgtttt 21920086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 30865355 - 30865420
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtat 229  Q
    |||||||||||||| || ||| ||||||||||| ||||||| | ||||| |||| |||||||||||    
T  30865355 tgtttggataaacaacttaattaagcatttataacataagttcctatcacataagtgcttatgtat 30865420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 2027530 - 2027466
Alignment:
Q  229 taagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtt 293  Q
    |||||||||  |||||||||  ||||||| |||||||||||||||| ||||| ||||||| ||||    
T  2027530 taagctatttttataacaaaagataaaataaagtcaaactattttcatataacctataagctgtt 2027466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 295
Target Start/End: Complemental strand, 2728017 - 2727914
Alignment:
Q  191 tttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagtt 290  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||  |  |||||||||  |||||   || ||||| | | ||  |||||||||||||||    
T  2728017 tttatagcata-gtgcttatcatataagtgcttatgtataagctgcttctataacaaaagataaacaaaaatcaaattgtattgatataagctataagtt 2727919  T
Q  291 gtttt 295  Q
    |||||    
T  2727918 gtttt 2727914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 5623060 - 5623124
Alignment:
Q  173 aaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||||||| ||  |||||||||||||||||  | ||||||||||| |||||||||||||| ||||    
T  5623060 aaacagcttaactaagcatttatagcataatcgtttatcatataagtgcttatgtataagatatt 5623124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 295
Target Start/End: Original strand, 31420882 - 31420970
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||| |||||| || |||| |||||||||||  ||||| ||||  |||||| || ||||||||||||  |||||| |||||||||||||    
T  31420882 ttattatataagtgtttatttataagctatttctataataaatggtaaaataaaatcaaactatttttatataagatataagttgtttt 31420970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 295
Target Start/End: Complemental strand, 3204731 - 3204600
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc 263  Q
    |||||||||||||| || ||||||||  ||||||  |||||   |||||||||| |||||| | |||| ||| |  ||||| |||  ||||||| |||||    
T  3204731 tgtttggataaacaacttaatcaagcgcttatagtgtaagtttatatcatataagtgcttacgaataaactacttctataataaaagataaaataaagtc 3204632  T
Q  264 aaactattttcttataagctataagttgtttt 295  Q
     |||| ||||| ||||||||| || |||||||    
T  3204631 gaactgttttcatataagctagaaattgtttt 3204600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 4248870 - 4248941
Alignment:
Q  195 tagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaa 266  Q
    ||||||||| |||| |||||||| ||||||| |||||||||||   ||||||||  ||||||| ||||||||    
T  4248870 tagcataagcgcttgtcatataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaaa 4248941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 6654523 - 6654598
Alignment:
Q  192 ttatagcataagtgcttatca-tataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaa 266  Q
    ||||||||| |  |||||||| |||||  ||||||||||||| ||||  |||||||||| ||||||||||||||||    
T  6654523 ttatagcattaacgcttatcaatataagggcttatgtataagttatttctataacaaataataaaattaagtcaaa 6654598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 29249382 - 29249445
Alignment:
Q  191 tttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataa 254  Q
    |||||||  ||| |||||||||||||| ||||||||||| |||||||  ||||||||| |||||    
T  29249382 tttatagtgtaaatgcttatcatataagtgcttatgtatcagctatttctataacaaaatataa 29249445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 34429851 - 34429748
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    |||||||||||||| ||||  ||  | || ||||||||||| ||||  ||||| ||   ||||||| ||||| |||| ||||||||||| ||||||||||    
T  34429851 ttatagcataagtgtttattgtactagtgattatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttg 34429752  T
Q  292 tttt 295  Q
    ||||    
T  34429751 tttt 34429748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 237
Target Start/End: Complemental strand, 741014 - 740984
Alignment:
Q  207 ttatcatataaatgcttatgtataagctatt 237  Q
    |||||||||||||||||||||||||||||||    
T  741014 ttatcatataaatgcttatgtataagctatt 740984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 281974 - 281913
Alignment:
Q  227 tataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataag 288  Q
    |||||||||||| |||||||||  ||||||| |||||||  | ||||| |||||||||||||    
T  281974 tataagctattcctataacaaaagataaaataaagtcaacttgttttcatataagctataag 281913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 10400186 - 10400223
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  10400186 taagggcttatcatataaatgtttatgtataagctatt 10400223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 13360652 - 13360717
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaa 265  Q
    |||| ||||||||||||| |||||||||  || |||||  ||||||||| |||||||| |||||||    
T  13360652 taagcgcttatcatataagtgcttatgtgcaaactatttctataacaaaatataaaataaagtcaa 13360717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 32578139 - 32578066
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||||||||| | ||  || || | ||||||||| || ||||||||||| ||||||||| |||||||||    
T  32578139 tgtttggataaacagattaagtaaacactcatagcataaatgattatcatataagtgcttatgtgtaagctatt 32578066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 2117379 - 2117415
Alignment:
Q  259 aagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  2117379 aagtcaaactattttcatataatctataagttgtttt 2117415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 295
Target Start/End: Original strand, 8010274 - 8010369
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttc-ttataagctataagttgtttt 295  Q
    |||||| ||||||||||| |||||| ||||||||||||  |||||| ||  ||||||| ||||||| ||| |||| || |||| |||||| ||||||    
T  8010274 taagtgtttatcatataagtgcttaggtataagctatttctataac-aacaataaaataaagtcaatctactttcattttaagttataagctgtttt 8010369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 8420346 - 8420282
Alignment:
Q  204 tgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaact 268  Q
    |||||||||||||| |||||||||| ||| ||||  | ||| |||| ||||||| ||||||||||    
T  8420346 tgcttatcatataagtgcttatgtacaagttatttctttaataaatgataaaataaagtcaaact 8420282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 295
Target Start/End: Original strand, 9732404 - 9732488
Alignment:
Q  211 catataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| |||||||| ||||||||||  ||||  |||  |||||||||||||||| | ||||| |  ||| |||||||||||||    
T  9732404 catataagtgcttatgcataagctatttctatattaaaggataaaattaagtcaaattgttttcatgcaaggtataagttgtttt 9732488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 24836330 - 24836262
Alignment:
Q  222 ttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagtt 290  Q
    ||||||||||| ||||  |||||||||  ||||||| |||||||| | ||||| ||||| |||||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataagtt 24836262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 29269819 - 29269879
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaa 266  Q
    |||||||||||||||||| ||||||| |||||  ||||||| |  ||||||| ||||||||    
T  29269819 cttatcatataaatgcttgtgtataaactatttctataacagaagataaaataaagtcaaa 29269879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 32386271 - 32386215
Alignment:
Q  181 aaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||| ||||| |||||| ||||  | ||||||||||| |||||||||||||||||||    
T  32386271 aaattaagcacttatagtataaaagtttatcatataagtgcttatgtataagctatt 32386215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 37063260 - 37063146
Alignment:
Q  167 ttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaa 266  Q
    |||||||||||||| ||||||  | ||||||||||| ||||| |||||||||||||||||||||| |||||  |||||||||  ||||||| ||||||||    
T  37063260 ttggataaacagcttaatcaactacttatagcataaatgcttgtcatataaatgcttatgtataaactatttctataacaaaagataaaataaagtcaaa 37063161  T
Q  267 ctattttcttataag 281  Q
    |||||||| ||||||    
T  37063160 ctattttcatataag 37063146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 194 - 290
Target Start/End: Complemental strand, 35135821 - 35135725
Alignment:
Q  194 atagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagtt 290  Q
    |||||||||||||||| ||||||| || ||||||||||| ||||  |||||||||  ||||||| |||||||||||||||| |||||||||||||||    
T  35135821 atagcataagtgcttaacatataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 265
Target Start/End: Complemental strand, 20982327 - 20982223
Alignment:
Q  161 acctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaa 260  Q
    ||||||||||||||||| ||  || |||   |||||||||||||||||||||||||| |||||||||||||||||||  |||||||||  ||||||| ||    
T  20982327 acctgtttggataaacaacttcattaagtgcttatagcataagtgcttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaa 20982228  T
Q  261 gtcaa 265  Q
    |||||    
T  20982227 gtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 19177385 - 19177491
Alignment:
Q  189 catttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataag 288  Q
    |||||||||  |||||| ||||||||||| ||||||||||||| |||||  || |||| |  ||||||||||||| |||| ||||| |||||||||||||    
T  19177385 catttatagtctaagtgattatcatataagtgcttatgtataaactatttctacaacagaagataaaattaagtctaactgttttcatataagctataag 19177484  T
Q  289 ttgtttt 295  Q
    |||||||    
T  19177485 ttgtttt 19177491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 11457002 - 11457074
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagct 234  Q
    ||||| ||||||||||||| ||||||||  ||||||||||||||||||||||| ||||| |||||||||||||    
T  11457002 cctgtctggataaacagcttaatcaagcgcttatagcataagtgcttatcatacaaatgtttatgtataagct 11457074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 162 - 295
Target Start/End: Complemental strand, 39823313 - 39823179
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagct-attcatataacaaattataaaattaa 260  Q
    |||||||||||||||| || ||||||||  ||| |||||||| |||| | ||| ||  |||||||||| || | ||| ||||||||||  ||||||| ||    
T  39823313 cctgtttggataaacaacttaatcaagcgcttacagcataagcgcttgttatagaagggcttatgtatcagattatttatataacaaaagataaaataaa 39823214  T
Q  261 gtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||| |||| ||||||||| ||||||||||    
T  39823213 gtcaaactactttcatataagctacaagttgtttt 39823179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 237
Target Start/End: Original strand, 26516180 - 26516252
Alignment:
Q  165 gtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||||||| || ||| ||||  |||||||||||| ||||||||||||| |||||||||||||||||||    
T  26516180 gtttggataaacaacttaattaagcgcttatagcataagcgcttatcatataagtgcttatgtataagctatt 26516252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 162 - 296
Target Start/End: Original strand, 3951497 - 3951628
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||||| | || ||| |||| || ||||||||| |||||||||||||| |||||||||||||  |||| ||| |||||  | |||||| ||     
T  3951497 cctgtttggataaataacttaattaagcgtt-atagcataaatgcttatcatataagtgcttatgtataaaatatttatacaacaa--tttaaaatgaaa 3951593  T
Q  262 tcaaactattttcttataagctataagttgttttt 296  Q
    ||||| ||||||| ||| ||||||||| |||||||    
T  3951594 tcaaattattttcatattagctataagctgttttt 3951628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 294
Target Start/End: Complemental strand, 19113271 - 19113176
Alignment:
Q  199 ataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgttt 294  Q
    ||||||| ||||||||||| ||||||||||||| |||||  |||||||||  ||||||| | ||| || | ||||||||||| |||||||||||||    
T  19113271 ataagtgtttatcatataattgcttatgtataaactatttttataacaaaaaataaaataatgtcgaatttttttcttataaactataagttgttt 19113176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 274
Target Start/End: Complemental strand, 3951983 - 3951873
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc 263  Q
    |||||||||||||| || ||||||||||| ||||| ||||| | | | |||||| |||||||| |||||||||| ||||||||||  ||||||| || ||    
T  3951983 tgtttggataaacaacttaatcaagcattgatagcgtaagtacatctgatataagtgcttatgaataagctatttatataacaaaagataaaatgaaatc 3951884  T
Q  264 aaactattttc 274  Q
    | |||| ||||    
T  3951883 agactactttc 3951873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 36539669 - 36539759
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgttttt 296  Q
    |||||||||||| ||||||||| |||||||||  | || ||||  ||||||| ||||||| || ||||| |||||||||||||||||||||    
T  36539669 cttatcatataagtgcttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctataagttgttttt 36539759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 11684341 - 11684423
Alignment:
Q  201 aagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    ||||||||||||||||| |||| ||||||||||||||  ||||||||| ||||||||  ||| ||||| ||||| ||||||||||    
T  11684341 aagtgcttatcatataagtgctaatgtataagctatttttataacaaaatataaaat--agtgaaactgttttcatataagctat 11684423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 295
Target Start/End: Complemental strand, 32059777 - 32059647
Alignment:
Q  163 ctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagt 262  Q
    ||||||||||||||| || ||| ||||| | | | ||||| | |||||||||||| |||||||||||||||| ||  | |||| ||  ||||||| ||||    
T  32059777 ctgtttggataaacaacttaat-aagcactcaaatcataaatacttatcatataagtgcttatgtataagctgtttttgtaactaag-ataaaataaagt 32059680  T
Q  263 caaactattttcttataagctataagttgtttt 295  Q
    |||||| ||||| ||||||||||||| ||||||    
T  32059679 caaactgttttcatataagctataagctgtttt 32059647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 295
Target Start/End: Complemental strand, 18704223 - 18704094
Alignment:
Q  166 tttggataaacagctaaatcaagcatttatagcataagtgctta-tcatataaatgcttatgtataagctattcatataacaaattataaaattaagtca 264  Q
    |||||||||||| || ||| ||||  || ||||||||||| | | |||||||| | |||||||||||| ||||  |||||||||  ||||| | ||||||    
T  18704223 tttggataaacaacttaattaagctcttgtagcataagtgttaaatcatataagttcttatgtataagttatttctataacaaaagataaa-taaagtca 18704125  T
Q  265 aactattttcttataagctataagttgtttt 295  Q
    | |||||||  ||||||||||||||||||||    
T  18704124 agctatttttatataagctataagttgtttt 18704094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 294
Target Start/End: Complemental strand, 14599458 - 14599362
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaa--ttataaaattaagtcaaactattttcttataagctataagttgttt 294  Q
    |||||||||||   |||||  ||||||| |||||||||  |||||||||  | |||||||||||||||||| ||||| |||||| ||||||||||||    
T  14599458 taagtgcttatagcataaacacttatgtttaagctatttctataacaaaactgataaaattaagtcaaactgttttcatataagttataagttgttt 14599362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 287
Target Start/End: Original strand, 39105372 - 39105468
Alignment:
Q  192 ttatagcataagtgcttatcat-ataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||||  |||| | || ||| |||| |||| ||| | ||||| ||||||||||||    
T  39105372 ttatagcataagtgcttatcatgataagcgcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataa 39105468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 13244672 - 13244597
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||||||||||| |||||  ||| ||||||||||||  ||||||||||||| | ||||  |||||||||||    
T  13244672 cctgtttggataaacagttaaattgagcgtttatagcataaacgcttatcatataagttcttacttataagctatt 13244597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 293
Target Start/End: Original strand, 31694398 - 31694528
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    ||||||||| ||| ||||||||| | ||| ||||| | || | ||||||||||||| |||||||| |||||||||   |||||||||  ||||| | |||    
T  31694398 cctgtttggttaaccagctaaatta-gcacttataacttaggggcttatcatataagtgcttatgaataagctatgtctataacaaaacataaactaaag 31694496  T
Q  262 tcaaactattttcttataagctataagttgtt 293  Q
    ||||||| ||||  || || ||||||||||||    
T  31694497 tcaaactgtttttatacaaactataagttgtt 31694528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 32172534 - 32172665
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc 263  Q
    |||||||||||||| |  ||| ||||  ||| |||||||| |||||||||| ||  |||||||||||| |||||  || ||||||  ||||||| |||||    
T  32172534 tgtttggataaacaacataattaagcgcttacagcataagcgcttatcatacaagagcttatgtataaactatttctacaacaaaagataaaatgaagtc 32172633  T
Q  264 aaactattttcttataagctataagttgtttt 295  Q
    ||  | ||| | ||||||||||||| ||||||    
T  32172634 aagttgtttacatataagctataagctgtttt 32172665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 295
Target Start/End: Complemental strand, 39257575 - 39257445
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc 263  Q
    |||||||||||||| || ||| ||||  |||||||||||    ||||||| ||| |||||||||||| |||||   |||||||||   |||||| |||||    
T  39257575 tgtttggataaacaacttaattaagcgcttatagcataaactattatcatgtaagtgcttatgtatatgctatctctataacaaaaggtaaaataaagtc 39257476  T
Q  264 aaactattttcttataagctataagttgtttt 295  Q
    ||||  ||||| ||||| ||||||||||||||    
T  39257475 aaac-cttttcatataaactataagttgtttt 39257445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 16945174 - 16945097
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatca--tataaatgcttatgtataagctatt 237  Q
    ||||||||||||||||||  ||| |||  ||||||||||||  ||||||||  ||||| |||||||||||||||||||    
T  16945174 cctgtttggataaacagcctaattaagtgtttatagcataaaagcttatcatgtataagtgcttatgtataagctatt 16945097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 295
Target Start/End: Complemental strand, 18543388 - 18543254
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||||||| || ||| | ||  |||||| |||||| |||||||||||   ||||| ||| ||||||||  ||| ||||| ||| |||| |||    
T  18543388 cctgtttggataaacaacttaataacgcccttatagtataagtacttatcatataggggcttacgtaaaagctatttgtatcacaaaatattaaataaag 18543289  T
Q  262 tcaaac-tattttcttataagctataagttgtttt 295  Q
    |||||| | ||||  |||||| |||||||||||||    
T  18543288 tcaaacttgtttttatataagatataagttgtttt 18543254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 296
Target Start/End: Complemental strand, 912802 - 912705
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc-aaactattttcttataagctataagttgttttt 296  Q
    ||||||||||||||||||  | ||||| ||||| ||||  ||||||| | |||||||| ||||| ||| | ||||| ||||||| |||||||||||||    
T  912802 taagtgcttatcatataagcgtttatgaataagttatttctataacacaatataaaataaagtcaaaattgttttcatataagcaataagttgttttt 912705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 7096271 - 7096206
Alignment:
Q  209 atcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttc 274  Q
    |||||| || |||||||||||||||||||  |||||||||  ||||||| ||||||||| ||||||    
T  7096271 atcatacaagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaaccattttc 7096206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 29117083 - 29116998
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    |||| ||||||||||||  || ||||||||| | ||||  |||||||||  ||||||| |||||||||| ||||| ||||||||||    
T  29117083 taagcgcttatcatatagctgattatgtatatgttatttctataacaaaagataaaataaagtcaaactgttttcgtataagctat 29116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 32194240 - 32194136
Alignment:
Q  195 tagcataagtgcttatcatataaatgcttatgtataagcta-ttcatataacaaattataaaattaagtcaaactattttc--ttataagctataagttg 291  Q
    ||||||||| ||||||||||||| |||||||| |||  ||| ||| ||||||||| |||||||| |||||||  | |||||   ||||||||||||| ||    
T  32194240 tagcataagagcttatcatataagtgcttatgcatacactacttcttataacaaaatataaaataaagtcaagatgttttcatatataagctataagatg 32194141  T
Q  292 ttttt 296  Q
    |||||    
T  32194140 ttttt 32194136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 10272533 - 10272489
Alignment:
Q  251 ataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||    
T  10272533 ataaaattaagtcaaattgttttcgtataagctataagttgtttt 10272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 12425479 - 12425583
Alignment:
Q  192 ttatagcataagtgcttatcat-ataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagtt 290  Q
    |||||| | ||||| ||||||| ||||| |||||||||||| ||||| |||||  |||  ||||||| |||| ||| | ||||| ||||||||||||| |    
T  12425479 ttatagtacaagtgtttatcatgataaacgcttatgtataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataagctataagct 12425578  T
Q  291 gtttt 295  Q
    |||||    
T  12425579 gtttt 12425583  T

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Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 14295454 - 14295518
Alignment:
Q  231 agctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||  |||||||||  ||||||| |||||||||| ||||| ||||||||||||| ||||||    
T  14295454 agctatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgtttt 14295518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 16889671 - 16889747
Alignment:
Q  219 tgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||||||||||   ||||||||  ||||| |||||||||||| ||||  || |||||||||| ||||||    
T  16889671 tgcttatgtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgtttt 16889747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 24084820 - 24084888
Alignment:
Q  205 gcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactatttt 273  Q
    ||||||||||||| |||| ||||||||||||||  ||| | |||  ||||||| |||||||||||||||    
T  24084820 gcttatcatataagtgctcatgtataagctatttttatgataaacgataaaatcaagtcaaactatttt 24084888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 31687906 - 31687978
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctat 236  Q
    ||||||||||| ||||||||| ||    |||||||||| | ||||||||||||| |||||||| |||||||||    
T  31687906 tgtttggataaccagctaaattaaatgcttatagcataggcgcttatcatataagtgcttatgaataagctat 31687978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 29588760 - 29588854
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaat 257  Q
    ||||||||||||||||  ||| | ||||  |||||||||||   ||| | |||||| |||||||||||||||||||  ||||||||| ||||||||    
T  29588760 cctgtttggataaacaaataatt-aagcgcttatagcataaacactttttatataagtgcttatgtataagctatttctataacaaaatataaaat 29588854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 1961915 - 1961977
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaact 268  Q
    |||||||||||| ||| ||| |||||||||||  ||||||||| | |||||||||||| ||||    
T  1961915 cttatcatataagtgcctatatataagctatttttataacaaaatgtaaaattaagtccaact 1961977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 37968798 - 37968892
Alignment:
Q  190 atttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagcta 284  Q
    ||||||||||||||| || ||||||| |  ||||| ||||||||||||  |||||||||  ||||||| | |||||| | ||||| || ||||||    
T  37968798 atttatagcataagttctaatcatatgagggcttaggtataagctatttctataacaaaagataaaatgaggtcaaagtgttttcatagaagcta 37968892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 41017697 - 41017739
Alignment:
Q  253 aaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||    
T  41017697 aaaataaagtcaaaccattttcctataagctataagttgtttt 41017739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 10772040 - 10771983
Alignment:
Q  192 ttatagcataagtgcttatcat-ataaatgcttatgtataagctattcatataacaaa 248  Q
    |||||||||||||||||||||| |||||  | |||||||||||||||  |||||||||    
T  10772040 ttatagcataagtgcttatcatgataaacacatatgtataagctatttctataacaaa 10771983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 11153601 - 11153532
Alignment:
Q  165 gtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagct 234  Q
    |||||||||| ||||  || |||||  ||||||||||||   ||||||||||| ||||||||||||||||    
T  11153601 gtttggataagcagcctaaccaagcgcttatagcataagactttatcatataagtgcttatgtataagct 11153532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 29014678 - 29014747
Alignment:
Q  205 gcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttc 274  Q
    ||||||||||||| || | ||||||||||||||  ||| | |||  ||||||| ||||||||||||||||    
T  29014678 gcttatcatataagtgttcatgtataagctatttttatgataaacgataaaatcaagtcaaactattttc 29014747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 285
Target Start/End: Complemental strand, 36774853 - 36774755
Alignment:
Q  186 aagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaat-tataaaattaagtcaaactattttcttataagcta 284  Q
    |||| ||||| || |||| |||||| |||||| | ||||||||||||| ||| |||||||||||  ||||||  |||||||||| |||  ||||||||||    
T  36774853 aagcgtttatggcttaagcgcttatgatataagtacttatgtataagccatttatataacaaatagataaaacaaagtcaaactgttt--ttataagcta 36774756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 40534103 - 40534148
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||||||||||| |||||||||||||   |||||||||||||||||    
T  40534103 ttatagcataagcgcttatcatataaggacttatgtataagctatt 40534148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 4991104 - 4991048
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaa 248  Q
    |||||||||||| | ||||||||||| || || |||||||||||||  |||||||||    
T  4991104 ttatagcataagcgattatcatataagtgtttgtgtataagctatttttataacaaa 4991048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 8177696 - 8177660
Alignment:
Q  193 tatagcataagtgcttatcatataaatgcttatgtat 229  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  8177696 tatagcataagcgcttatcatttaaatgcttatgtat 8177660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 9202910 - 9202806
Alignment:
Q  192 ttatagcataagtgcttatcat-ataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagtt 290  Q
    |||||||| ||||| ||||||| |||| ||||||| |||||||||||  | || ||||  ||||||| |||| ||| | ||||| ||||||| ||||| |    
T  9202910 ttatagcacaagtgtttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagct 9202811  T
Q  291 gtttt 295  Q
    |||||    
T  9202810 gtttt 9202806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 9927492 - 9927596
Alignment:
Q  190 atttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagt 289  Q
    ||||||| ||||||  |||||||  ||| || ||||||||||| ||||  ||||  |||  ||||||||| |||||| | ||||| ||||||| ||||||    
T  9927492 atttataacataagcacttatcaagtaagtgtttatgtataagttatttgtatagtaaaagataaaattacgtcaaattgttttcatataagcgataagt 9927591  T
Q  290 tgttt 294  Q
    |||||    
T  9927592 tgttt 9927596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 40097105 - 40097149
Alignment:
Q  193 tatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||||||||||  ||||||||| ||||||||||| |||||    
T  40097105 tatagcataagtgcttgacatataaatacttatgtataaactatt 40097149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 5e-25; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 31341073 - 31341179
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||||||| || ||||||||  |||| ||||||| ||||||||| |||||||||||||||||||||||  |||||||||  ||||||| |||    
T  31341073 cctgtttggataaacaacttaatcaagcgcttattgcataagcgcttatcatctaaatgcttatgtataagctatttgtataacaaaagataaaataaag 31341172  T
Q  262 tcaaact 268  Q
    |||||||    
T  31341173 tcaaact 31341179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 49060420 - 49060552
Alignment:
Q  163 ctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagt 262  Q
    |||||||| ||||||||| ||| ||||| |||||| ||||  ||||||||||||| |  ||||||||||||||||  |||||||||  ||||||| ||||    
T  49060420 ctgtttgggtaaacagcttaattaagcacttatagtataatggcttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagt 49060519  T
Q  263 caaactattttcttataagctataagttgtttt 295  Q
    |||| ||||||  ||||||||||||||| ||||    
T  49060520 caaattatttttatataagctataagttatttt 49060552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 295
Target Start/End: Complemental strand, 27481484 - 27481352
Alignment:
Q  163 ctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagt 262  Q
    ||||||||||||||| || ||| | |   ||||||||||| || |||| |||||| || ||||||||||||||||  |||||||||  ||||||  ||||    
T  27481484 ctgtttggataaacaacttaattaggtgcttatagcataaatgtttattatataagtgtttatgtataagctatttctataacaaaggataaaacgaagt 27481385  T
Q  263 caaactattttcttataagctataagttgtttt 295  Q
    |||||| ||| | ||||||||||||||| ||||    
T  27481384 caaactgtttccatataagctataagttatttt 27481352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 45593865 - 45593791
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataag 281  Q
    |||||||||||||||||||||||||||||||  | |||||||  ||||||| |||||||||| ||||| ||||||    
T  45593865 ttatcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataag 45593791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 295
Target Start/End: Complemental strand, 3610883 - 3610798
Alignment:
Q  210 tcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||| |||||||||||||||||||  || ||||||  ||||||| ||| |||||| ||||  ||||||||||||||||||||    
T  3610883 tcatataagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgtttt 3610798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 295
Target Start/End: Complemental strand, 5006639 - 5006567
Alignment:
Q  223 tatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||||||| |||||||||  ||||||| |||||||||| ||||| |||||| ||||| |||||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgtttt 5006567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 295
Target Start/End: Original strand, 5373142 - 5373237
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||||| ||| |||||||||||| ||||||  |||||||||  ||||||| ||||| ||  |||||  |||||| |||||||||||||    
T  5373142 taagtgcttatcatgtaagtgcttatgtatatgctatttctataacaaaagataaaataaagtccaaacatttttatataagttataagttgtttt 5373237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 296
Target Start/End: Original strand, 33894549 - 33894635
Alignment:
Q  209 atcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgttttt 296  Q
    ||||| ||| |||||||||||||||||||  |||||||||  |||||| ||||||||||| ||||| |||||||| || |||||||||    
T  33894549 atcatgtaagtgcttatgtataagctatttctataacaaaagataaaa-taagtcaaactgttttcatataagctttatgttgttttt 33894635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 288
Target Start/End: Original strand, 35536029 - 35536112
Alignment:
Q  205 gcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataag 288  Q
    |||||||||||||| ||||||||||||||||||  ||||||| |  ||||||| |||||||| | ||||| |||||| ||||||    
T  35536029 gcttatcatataaaggcttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataagttataag 35536112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 36874097 - 36874023
Alignment:
Q  221 cttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||||||||  ||||| |||| ||||||| || |  || ||||||||||||||||||||||||||||    
T  36874097 cttatgtataagctatttctataagaaatgataaaataaatttgaattattttcttataagctataagttgtttt 36874023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 295
Target Start/End: Original strand, 1417203 - 1417276
Alignment:
Q  222 ttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||| ||||| ||||||||||  ||||||| |||||||| | ||||| ||||||| ||||||||||||    
T  1417203 ttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgtttt 1417276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 27121740 - 27121656
Alignment:
Q  199 ataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagct 283  Q
    ||||| ||||||||||||| | |||||||||||| ||||  ||||| |||| ||||||| |||||||| | ||||| ||||||||    
T  27121740 ataagcgcttatcatataattccttatgtataagatatttctataataaatgataaaataaagtcaaattgttttcatataagct 27121656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 45777285 - 45777229
Alignment:
Q  239 atataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||  |||||||||||||||||| ||||| ||||| ||||||||||||||    
T  45777285 atataacaaaagataaaattaagtcaaactgttttcatataaactataagttgtttt 45777229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 39505840 - 39505911
Alignment:
Q  166 tttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||||||||| ||| ||||||||||||||||| || ||||||  ||| || ||||||||||| ||||    
T  39505840 tttggataaacagctcaattaagcatttatagcataaatgtttatcaagtaagtgtttatgtataagttatt 39505911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 39566379 - 39566304
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||| ||||||| | ||| ||||| ||||| ||||||||||||||| ||||||| |||||| ||| |||||    
T  39566379 cctgtttgggtaaacagtttaattaagcacttataacataagtgcttatcaaataaatgattatgtttaaactatt 39566304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 293
Target Start/End: Complemental strand, 5272978 - 5272880
Alignment:
Q  195 tagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtt 293  Q
    |||||||||||||| | | | || || |||||||||| ||||| ||||||||||  |||||||||||||| | | ||||| ||||||||| ||| ||||    
T  5272978 tagcataagtgcttgttacacaactgtttatgtataaactatttatataacaaaagataaaattaagtcacattgttttcatataagctagaagctgtt 5272880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 27389295 - 27389337
Alignment:
Q  195 tagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  27389295 tagcataagtgcttatcatataagtgtttatgtataagctatt 27389337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 1431469 - 1431424
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||||||||||||||||||||||||| || ||||||||||| ||||    
T  1431469 ttatagcataagtgcttatcatataagtgtttatgtataagttatt 1431424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 9527237 - 9527148
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||| || ||||||| |||| |||||   |||||||||  ||| ||| |||||||||| ||||| ||||| ||||||||||||||    
T  9527237 cttatcatacaagtgcttatatatacgctatatctataacaaaagatataataaagtcaaactgttttcatataaactataagttgtttt 9527148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 295
Target Start/End: Complemental strand, 28340587 - 28340454
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||| |||||| ||| |||   ||||||||| |||| ||||| || || |  | ||||||||||||||  |  ||||||  ||||||| |||    
T  28340587 cctgtttggatatacagcttaattaagtgcttatagcattagtgtttatcgtacaagtattaatgtataagctatttcttcaacaaacaataaaataaag 28340488  T
Q  262 tcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| ||||| | |||| |||||||||||||    
T  28340487 tcaaactgttttcatgtaagttataagttgtttt 28340454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 248
Target Start/End: Original strand, 2223030 - 2223113
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaa 248  Q
    ||||||||||||||  | ||| | ||||||||||||||| | |||||| ||||| || ||||||||||||||||  |||||||||    
T  2223030 tgtttggataaacaatttaattaggcatttatagcataaat-cttatcgtataagtgtttatgtataagctatttctataacaaa 2223113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 7244626 - 7244703
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctata 286  Q
    ||||||||||| |||||||||||||||||||  |||| ||||  ||||||  |||||||||| |||||  ||||||||||    
T  7244626 ttatcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttc--ataagctata 7244703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 287
Target Start/End: Original strand, 991987 - 992074
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    |||||| ||||||||||| |||||| ||||||| | ||  |||||||||  ||||||| ||| |||| ||||||| |||||| |||||    
T  991987 taagtgtttatcatataagtgcttacgtataagttgtttctataacaaaaaataaaataaagacaaaatattttcatataaggtataa 992074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 3501102 - 3501027
Alignment:
Q  217 aatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgt 292  Q
    ||||||||||||||||||| | |||||| |||  ||||||| ||||||||  |||||| |||||  ||||||||||    
T  3501102 aatgcttatgtataagctaattatataataaaagataaaataaagtcaaatcattttcatataaaatataagttgt 3501027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 27518008 - 27517969
Alignment:
Q  195 tagcataagtgcttatcatataaatgcttatgtataagct 234  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  27518008 tagcataagtgcttatcatataagtgtttatgtataagct 27517969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 30751434 - 30751513
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttata 279  Q
    |||||| ||||||||||| ||||| || |||| |||||  | ||||||| |||||||| |||||||| ||||||| ||||    
T  30751434 taagtgtttatcatataagtgcttgtgaataaactatttttgtaacaaaatataaaataaagtcaaattattttcatata 30751513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 36598512 - 36598437
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||||||||||||||| || ||| ||| | |||  ||||||||| ||||||||| | || ||||||||||||||||    
T  36598512 cctgtttggataaacaacttaattaagaacttacggcataagtgtttatcatattagtgtttatgtataagctatt 36598437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 47003996 - 47004099
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    |||||||| || || ||||||||||| || |||| | |||||||||  ||||||||   ||||||| |||||||||||||||  ||| | ||||||| ||    
T  47003996 ttatagcaaaaatgtttatcatataagtgtttatatgtaagctatttctataacaatagataaaataaagtcaaactatttttatatgaactataagctg 47004095  T
Q  292 tttt 295  Q
    ||||    
T  47004096 tttt 47004099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 24975816 - 24975906
Alignment:
Q  195 tagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    ||||||| ||||||||||||||| |||| |||||||| ||| |  |||||||||  ||||||| ||| | |||| ||||  ||||||||||    
T  24975816 tagcatatgtgcttatcatataagtgctgatgtataatctacttctataacaaaagataaaataaaggcgaactgtttttatataagctat 24975906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 237
Target Start/End: Complemental strand, 29574747 - 29574717
Alignment:
Q  207 ttatcatataaatgcttatgtataagctatt 237  Q
    |||||||||||||||||||||||||||||||    
T  29574747 ttatcatataaatgcttatgtataagctatt 29574717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 268
Target Start/End: Complemental strand, 753394 - 753289
Alignment:
Q  163 ctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagt 262  Q
    ||||||||||||||| || ||| |||  ||||||||||||    |||||||||||  |||| ||||||  |||||  ||||||||| ||| |||| ||||    
T  753394 ctgtttggataaacaacttaattaagtgtttatagcataaacatttatcatataagcgcttgtgtatacactatttctataacaaaatatgaaataaagt 753295  T
Q  263 caaact 268  Q
    ||||||    
T  753294 caaact 753289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 2801720 - 2801757
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  2801720 taagtgtttatcatatacatgcttatgtataagctatt 2801757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 295
Target Start/End: Complemental strand, 5628753 - 5628624
Alignment:
Q  166 tttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaa 265  Q
    |||||||||||  || ||| |||||  |||| || ||| |||||||||| ||  ||||||| ||||||||||  |||||||||| |||||||  |||  |    
T  5628753 tttggataaactacttaattaagcacatataacagaagggcttatcatacaagggcttatgcataagctatttttataacaaatgataaaatagagttga 5628654  T
Q  266 actattttcttataagctataagttgtttt 295  Q
    ||| ||||| | |||| |||||| ||||||    
T  5628653 actgttttcatttaagatataagctgtttt 5628624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 8445196 - 8445269
Alignment:
Q  193 tatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaa 266  Q
    |||||||| |||| ||||||||||| ||||| | |||||||||||  |||||||||  ||||||| ||| ||||    
T  8445196 tatagcattagtgtttatcatataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaa 8445269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 26935711 - 26935646
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaat 257  Q
    ||||| |||||| | ||||||||||| ||||| ||| |||||||||  |||||||||| |||||||    
T  26935711 ttataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaat 26935646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 288
Target Start/End: Original strand, 30133960 - 30134054
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataag 288  Q
    |||||||||||| ||||||||||  | || ||||||||||||||||  || ||||||  ||||||| |||||||  | ||||| |||||||| ||||    
T  30133960 ttatagcataagcgcttatcata--agtgtttatgtataagctatttttacaacaaaagataaaataaagtcaacttgttttcgtataagctttaag 30134054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 296
Target Start/End: Original strand, 30837337 - 30837442
Alignment:
Q  191 tttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagtt 290  Q
    ||||||||| ||||||||||||||||| ||| || ||||||||| ||  ||| ||| |  ||||||||| || ||| | ||||| ||| |||| |||| |    
T  30837337 tttatagcagaagtgcttatcatataagtgcctaagtataagctctttctatgacataaaataaaattatgttaaattgttttcatatcagctttaagct 30837436  T
Q  291 gttttt 296  Q
    ||||||    
T  30837437 gttttt 30837442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 39539914 - 39539877
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  39539914 taagtgcttatcatataactgcttttgtataagctatt 39539877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 45078217 - 45078258
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaa 248  Q
    ||||||||||| |||||||||||||||||||  |||||||||    
T  45078217 ttatcatataagtgcttatgtataagctatttttataacaaa 45078258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 1422797 - 1422837
Alignment:
Q  166 tttggataaacagctaaatcaagcatttatagcataagtgc 206  Q
    ||||||||||||||| ||| || ||||||||||||||||||    
T  1422797 tttggataaacagcttaattaaacatttatagcataagtgc 1422837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 5620285 - 5620213
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagct 234  Q
    |||||||||||||||| || ||| |||   ||||||| ||||||| ||| |||||| |||||||| |||||||    
T  5620285 cctgtttggataaacaacttaattaagttcttatagcctaagtgcatattatataagtgcttatgcataagct 5620213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 24895332 - 24895368
Alignment:
Q  259 aagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  24895332 aagtcaaattattttcatataagctataagttgtttt 24895368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 24909640 - 24909676
Alignment:
Q  259 aagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  24909640 aagtcaaattattttcatataagctataagttgtttt 24909676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 31002729 - 31002773
Alignment:
Q  251 ataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| |||||||| ||||||| ||||||||||||| ||||||    
T  31002729 ataaaataaagtcaaaatattttcatataagctataagctgtttt 31002773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 45813314 - 45813238
Alignment:
Q  219 tgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| |||||||||||  |||| ||||  ||||||| |||||||  | ||||| ||||| ||||||||||||||    
T  45813314 tgcttatttataagctatttctataccaaaagataaaataaagtcaacttgttttcatataatctataagttgtttt 45813238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 3102570 - 3102705
Alignment:
Q  160 gacctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaatta 259  Q
    |||||||||||||||||||||  || ||||  ||| | ||||| || ||||||||||| |||||||||||||||||||  |||| |||| |||||||| |    
T  3102570 gacctgtttggataaacagctttattaagcgcttaaaacataaatgtttatcatataactgcttatgtataagctatttttatagcaaaatataaaataa 3102669  T
Q  260 agtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||||||  ||||| |||| || ||||||    
T  3102670 agtcaaactatttttatataatctattagctgtttt 3102705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 295
Target Start/End: Original strand, 37766720 - 37766810
Alignment:
Q  205 gcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||||| ||||||||||| |||||||||||| |||||  ||||||| |||||||| | ||||| ||||| ||||||||||||||    
T  37766720 gcttatcatataagtgcttatgtattagctattcatatgacaaaaaataaaataaagtcaaaatgttttcgtataaactataagttgtttt 37766810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 11393555 - 11393482
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||||| ||||||| |||||||||||    
T  11393555 tgtttggataaacagcttaattaagcacttatagcacaagtgtttatcatataagtgcttatctataagctatt 11393482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 11410216 - 11410143
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||||| ||||||| |||||||||||    
T  11410216 tgtttggataaacagcttaattaagcacttatagcacaagtgtttatcatataagtgcttatctataagctatt 11410143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 17952848 - 17952759
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||||  |||||| |||||||||||  |||||||||  ||||||| |||||||||||||||| ||||||||| ||| ||||||    
T  17952848 cttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgtttt 17952759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 279
Target Start/End: Original strand, 18884762 - 18884878
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatat-aacaaattataaaattaagt 262  Q
    ||||||||||||||||| ||||||||| ||||||||| |||  ||||||||||| |||| ||||||||| ||||  ||| || ||| |||||||| || |    
T  18884762 tgtttggataaacagcttaatcaagcacttatagcattagtttttatcatataagtgctcatgtataagttatttctataaaaaaaatataaaataaaat 18884861  T
Q  263 caaactattttcttata 279  Q
    |||||| ||||| ||||    
T  18884862 caaactgttttcatata 18884878  T

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Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 295
Target Start/End: Complemental strand, 28803668 - 28803564
Alignment:
Q  191 tttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagtt 290  Q
    ||||| |||||| |||||||||||||| ||||||| |||||| ||||   ||||||||  ||||||| ||||||||||  |||| ||||||||| |||||    
T  28803668 tttatggcataaatgcttatcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagtt 28803569  T
Q  291 gtttt 295  Q
    |||||    
T  28803568 gtttt 28803564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 1899823 - 1899910
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| | |||||||||||||||||| |||  ||||| ||| |||||||| ||||||   ||||||||||||||||||||||||||||    
T  1899823 cttatcacagaaatgcttatgtataagcgatttctataataaagtataaaataaagtcat--tattttcttataagctataagttgtttt 1899910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 296
Target Start/End: Original strand, 25609727 - 25609809
Alignment:
Q  214 ataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgttttt 296  Q
    |||| |||||||||||||||||||  ||||| |||  ||||||| |||||||  ||||||| |||||||||||||||||||||    
T  25609727 ataagtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataagttgttttt 25609809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 293
Target Start/End: Complemental strand, 31740144 - 31740019
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataa-gctattcatataacaaattataaaattaagt 262  Q
    |||||| ||||| |||| ||| ||||| || ||| ||||||||||||||     || ||||||||||| ||||||  |||||| ||  ||||||| ||||    
T  31740144 tgtttgtataaatagcttaattaagcacttttagtataagtgcttatca-----atacttatgtataaagctatttctataactaaagataaaataaagt 31740050  T
Q  263 caaactattttcttataagctataagttgtt 293  Q
    |||||||||||| ||||||||||||||||||    
T  31740049 caaactattttcatataagctataagttgtt 31740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 265
Target Start/End: Complemental strand, 33197429 - 33197327
Alignment:
Q  163 ctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagt 262  Q
    ||||||||||||||| |||||| || || ||||| |||||  ||||||||||||| ||||||| |||||||||||  |||||||||  ||| ||| ||||    
T  33197429 ctgtttggataaacaactaaattaaacacttataacataaacgcttatcatataagtgcttatctataagctatttctataacaaaagatagaataaagt 33197330  T
Q  263 caa 265  Q
    |||    
T  33197329 caa 33197327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 295
Target Start/End: Original strand, 10143103 - 10143184
Alignment:
Q  214 ataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||| |||||||||||||| ||||  |||||||||  |||||||||||||||||| ||||  ||||||||||||||| ||||    
T  10143103 ataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagttttttt 10143184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 296
Target Start/End: Complemental strand, 10198639 - 10198537
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    ||||||||| |||||||||||||||| | ||| ||||||||||||||||||||  ||  ||||||| |||||  ||||||||| |||||| |||| | ||    
T  10198639 ttatagcatgagtgcttatcatataagtacttttgtataagctattcatataagtaaagataaaataaagtc--actattttcatataagatataggctg 10198542  T
Q  292 ttttt 296  Q
    |||||    
T  10198541 ttttt 10198537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 287
Target Start/End: Complemental strand, 18962200 - 18962104
Alignment:
Q  191 tttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    ||||||||| | ||| ||||||| ||| ||||||||||| |||||||  |||||||||  ||||||| |||| ||||| ||||| ||||||||||||    
T  18962200 tttatagcacaggtgtttatcatgtaagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataa 18962104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 284
Target Start/End: Original strand, 35459819 - 35459911
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagcta 284  Q
    |||||||||||||| ||||||||||| || || |||||||||||||  |||| ||||  ||||||| |||||||| | ||||| |||||||||    
T  35459819 ttatagcataagtgtttatcatataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaaattgttttcgtataagcta 35459911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 11513782 - 11513910
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc 263  Q
    ||||||||||| ||| | ||| ||||  ||||| ||||||  ||||||||||||  | ||||||||||| ||||   | ||||||  ||||||| |||||    
T  11513782 tgtttggataagcaggtcaattaagcccttataacataagcacttatcatataagggtttatgtataagttatt---acaacaaaagataaaataaagtc 11513878  T
Q  264 aaactattttcttataagctataagttgtttt 295  Q
    ||| | ||||| ||||||||||||||||||||    
T  11513879 aaattgttttcatataagctataagttgtttt 11513910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 37053517 - 37053606
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||| ||||||||||||  |||||  ||||||| |  ||||||| |||||||||| ||||| |||||| |||||||| ||||    
T  37053517 cttatcatataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaaactgttttcatataagttataagttttttt 37053606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 43808484 - 43808576
Alignment:
Q  191 tttatagcataagtgcttatcatataaatgcttatgtataagcta-ttcatataacaaattataaaattaagtcaaactattttcttataagct 283  Q
    ||||||||||||| || |||||||||| || |||||||||||||| ||  |||||||||  ||||||| |||| ||||||||||| ||||||||    
T  43808484 tttatagcataagcgcgtatcatataagtgtttatgtataagctattttttataacaaa-cataaaataaagttaaactattttcatataagct 43808576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 3423922 - 3423830
Alignment:
Q  199 ataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    |||||||||||||||| || || ||||||||||| ||||  | || ||||  ||||||| |||||||| ||||||| ||||| ||||||||||    
T  3423922 ataagtgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 3423830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 295
Target Start/End: Original strand, 3673724 - 3673819
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||| || |||||||| ||||||||||| || ||||  ||||||||| |||||||| |||| ||| | ||||| |||||| |||||||| ||||    
T  3673724 taagtgtttgtcatataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataagttttttt 3673819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 10190159 - 10190253
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaat 257  Q
    |||||||||||||| |||| ||| ||||| |||||| |  |||| ||||||||||| ||||||||||||| |||||  |||||||||  |||||||    
T  10190159 cctgtttggataaa-agctcaattaagcacttatagtaggagtggttatcatataagtgcttatgtataaactatttttataacaaaggataaaat 10190253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 295
Target Start/End: Original strand, 28933753 - 28933836
Alignment:
Q  212 atataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||| |||| |||||||||||||| ||||||||||  ||||||| || ||||| ||||||| | |||| ||||| |||||||    
T  28933753 atataagtgctcatgtataagctatttatataacaaaagataaaatcaaatcaaattattttcatttaagttataaattgtttt 28933836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 9478220 - 9478302
Alignment:
Q  204 tgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctata 286  Q
    |||||||||||||| || ||||||||||||||||  |||||||    ||||||| || ||||| ||||||| |||||||||||    
T  9478220 tgcttatcatataagtgtttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctata 9478302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 9551517 - 9551583
Alignment:
Q  221 cttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    |||||||||||||||||  ||||| |||||||||||| |||||||||| ||||  ||||| ||||||    
T  9551517 cttatgtataagctatttttataataaattataaaataaagtcaaactgtttttgtataaactataa 9551583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 5133652 - 5133784
Alignment:
Q  164 tgtttggataaacagctaaatcaagcat---ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaa 260  Q
    ||||||||||||||||| ||| |||  |   ||||||||||||  ||||||||||   |||||||||||||||||||  |||||||||  ||||||| ||    
T  5133652 tgtttggataaacagcttaattaagtgtttattatagcataagcacttatcatat--ttgcttatgtataagctatttctataacaaaagataaaataaa 5133749  T
Q  261 gtcaaactattttcttataagctataagttgtttt 295  Q
    |  ||||| ||||  |||||| |||||| ||||||    
T  5133750 gataaactgtttttatataagatataagctgtttt 5133784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 296
Target Start/End: Complemental strand, 28810535 - 28810430
Alignment:
Q  191 tttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagtt 290  Q
    ||||||||| || || |||| |||||  |||||| ||||||||||||| ||||| ||| |||||||| || || |||| ||| | ||||||||||||  |    
T  28810535 tttatagcacaaatgtttattatatatgtgcttaagtataagctattcctataataaaatataaaataaattcgaactgtttccatataagctataatct 28810436  T
Q  291 gttttt 296  Q
    ||||||    
T  28810435 gttttt 28810430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 33267667 - 33267586
Alignment:
Q  202 agtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagct 283  Q
    |||| ||||||||||| ||||||||||||| |||||  |||||||||   |||||| |||| ||||| ||||| ||||||||    
T  33267667 agtggttatcatataagtgcttatgtataatctatttctataacaaacagtaaaataaagttaaactgttttcatataagct 33267586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 35485885 - 35485930
Alignment:
Q  251 ataaaattaagtcaaactattttcttataagctataagttgttttt 296  Q
    ||||||| ||||||||||||||  ||||||||||||||||||||||    
T  35485885 ataaaataaagtcaaactatttcattataagctataagttgttttt 35485930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 43635290 - 43635221
Alignment:
Q  163 ctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataag 232  Q
    |||||| ||||||||||| ||| ||||| ||||||||||||  |||||||| |||  |||||||||||||    
T  43635290 ctgtttagataaacagcttaattaagcacttatagcataagcacttatcatgtaatcgcttatgtataag 43635221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 4550657 - 4550789
Alignment:
Q  163 ctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagt 262  Q
    ||||||||||||||| || ||| ||  | |||||||||||   ||||||| |||| |||||||||||||| | ||   |||| |||  ||||||| | ||    
T  4550657 ctgtttggataaacaacttaattaacaacttatagcataatctcttatcacataagtgcttatgtataagttgtttccataataaaagataaaataacgt 4550756  T
Q  263 caaactattttcttataagctataagttgtttt 295  Q
    ||| || ||||| ||||| ||||||||||||||    
T  4550757 caagctgttttcatataaactataagttgtttt 4550789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 286
Target Start/End: Original strand, 31461325 - 31461441
Alignment:
Q  170 gataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaacta 269  Q
    |||||||| || ||| ||||| || ||||||||  |  |||||||||| || |||| |||||||||||  |||||||||  ||||||| |||||||| ||    
T  31461325 gataaacaacttaattaagcacttctagcataaacgtatatcatataagtggttatatataagctatttctataacaaaagataaaataaagtcaaatta 31461424  T
Q  270 ttttcttataagctata 286  Q
    || || | |||||||||    
T  31461425 ttctcctgtaagctata 31461441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 9878819 - 9878740
Alignment:
Q  216 aaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||| || ||||||||  |||||||||  ||||||| || ||||||||||||   ||| |||||||||||||||    
T  9878819 aaatgcttatataaaagctatttctataacaaaagataaaataaactcaaactatttttacatatgctataagttgtttt 9878740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 23143107 - 23143036
Alignment:
Q  224 atgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||||||  | |||||||  ||||||| || ||||| | |||||||||||||||| |||||||||    
T  23143107 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttgtttt 23143036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 23554897 - 23554826
Alignment:
Q  224 atgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||||||  | |||||||  ||||||| || ||||| | |||||||||||||||| |||||||||    
T  23554897 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttgtttt 23554826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 29430695 - 29430765
Alignment:
Q  222 ttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtt 293  Q
    ||||||||||||||||  |||||||||   |||| | |||||||||| ||||||||||||||||||| ||||    
T  29430695 ttatgtataagctatttctataacaaaagttaaa-taaagtcaaactgttttcttataagctataagctgtt 29430765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 33944530 - 33944617
Alignment:
Q  208 tatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||||| ||||  ||||||||||  |  || ||| |||||||| |||||||| | ||||| |||||||||||| |||||||    
T  33944530 tatcatataaatgtttataaataagctatttcttgaataaaatataaaataaagtcaaattgttttcatataagctataaattgtttt 33944617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 288
Target Start/End: Complemental strand, 1160929 - 1160809
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||||||| || ||  || | | |||||||| ||||||| |||||||||| |||||| | ||||| ||  |||| ||     |||||| |||    
T  1160929 cctgtttggataaacaacttaaataaacttctatagcattagtgcttctcatataaatacttatgca-aagctgtttctatagca-----taaaataaag 1160836  T
Q  262 tcaaactattttcttataagctataag 288  Q
    ||||||||||||| |||||||||||||    
T  1160835 tcaaactattttcatataagctataag 1160809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 9878083 - 9877997
Alignment:
Q  209 atcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||| ||||||||||||| ||||| ||  |||||| |||||| | | ||||||  |||||| || |||| ||||||||||||    
T  9878083 atcatataagtgcttatgtataaactatttatgcaacaaaatataaattaaggtcaaaagattttcatacaagccataagttgtttt 9877997  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 12970925 - 12970983
Alignment:
Q  208 tatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaa 266  Q
    |||| |||| ||||||||| ||||||||||  ||||| |||| ||||||||||||||||    
T  12970925 tatcttatatatgcttatgcataagctatttctataaaaaatgataaaattaagtcaaa 12970983  T

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Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 288
Target Start/End: Original strand, 13866824 - 13866894
Alignment:
Q  218 atgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataag 288  Q
    |||||||||||||| |||||  |||| ||||  |||||||||||||||||| ||||  ||||| |||||||    
T  13866824 atgcttatgtataaactatttctatagcaaaagataaaattaagtcaaactgtttttatataatctataag 13866894  T

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Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 35755642 - 35755560
Alignment:
Q  213 tataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||| || ||||||||||||||||  |||||  || || ||||| |||||||| | ||||| | ||||||||||||||||||    
T  35755642 tataagtgtttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttgtttt 35755560  T

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Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 37033965 - 37034035
Alignment:
Q  204 tgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttc 274  Q
    |||||||||||| ||| ||||||||||| |||||  ||||| |||  ||||||| ||||||||| ||||||    
T  37033965 tgcttatcatatgaatacttatgtataaactatttctataaaaaaagataaaataaagtcaaacgattttc 37034035  T

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Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 295
Target Start/End: Original strand, 1646945 - 1647026
Alignment:
Q  214 ataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||| |||||||||| ||||||||  |||| ||||  ||||||||||||  || | |||| |||||||||||||| ||||||    
T  1646945 ataagtgcttatgtacaagctatttgtatagcaaacgataaaattaagttcaattgtttttttataagctataagctgtttt 1647026  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 25790036 - 25790137
Alignment:
Q  191 tttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagtt 290  Q
    ||||||| ||||| |||||||||||||  | ||||||||||  ||||  ||||| |||  ||||| | |||||||||| ||||| ||||||||| || ||    
T  25790036 tttatagtataagcgcttatcatataa--gtttatgtataatatatttctataaaaaaagataaagtgaagtcaaactgttttcatataagctacaaatt 25790133  T
Q  291 gttt 294  Q
    ||||    
T  25790134 gttt 25790137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 33942118 - 33942162
Alignment:
Q  251 ataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| |||||||||| ||||| | ||||||||||||||||||    
T  33942118 ataaaataaagtcaaactgttttcatgtaagctataagttgtttt 33942162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 34339031 - 34339123
Alignment:
Q  191 tttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagct 283  Q
    ||||||||||||   |||||||||||| ||||||||||||| || ||  |||| | ||  ||||||| |||||| ||| ||||| ||||||||    
T  34339031 tttatagcataaacacttatcatataagtgcttatgtataaactttttctatagctaaagataaaataaagtcagactgttttcgtataagct 34339123  T

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Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 37276718 - 37276758
Alignment:
Q  255 aattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||||| ||||| |||||| |||||||||||||    
T  37276718 aattaagtcaaactgttttcatataagttataagttgtttt 37276758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 37292449 - 37292405
Alignment:
Q  251 ataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| |||| ||||||||||| |||||||||| |||||||||    
T  37292449 ataaaataaagtaaaactattttcatataagctattagttgtttt 37292405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 38239718 - 38239638
Alignment:
Q  186 aagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaa 266  Q
    ||||| || |||||||||  || ||||| ||| || ||||||||||||||||  |||||||||  ||||||| ||||||||    
T  38239718 aagcacttgtagcataagcactcatcatgtaagtgtttatgtataagctatttctataacaaaagataaaatcaagtcaaa 38239638  T

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Target: chr4 (Bit Score: 52; Significance: 8e-21; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 24443947 - 24444050
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    ||||||||||||  |||||||||||| | ||||||||||||| |||  || |||||| |||||||| || |||||| |||||| ||||||||||||||||    
T  24443947 ttatagcataagcacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttg 24444046  T
Q  292 tttt 295  Q
    ||||    
T  24444047 tttt 24444050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 294
Target Start/End: Original strand, 24193466 - 24193596
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc 263  Q
    |||||||||||||| || |||  |||| |||||||||||  ||||||||||||| | |||||||||||| ||||  || |||||| |||||||   |||     
T  24193466 tgtttggataaacaacttaattgagcacttatagcataaacgcttatcatataagtacttatgtataagttatttttacaacaaaatataaaacagagtt 24193565  T
Q  264 aaactattttcttataagctataagttgttt 294  Q
    ||||||||||| |||||| ||||||||||||    
T  24193566 aaactattttcatataagttataagttgttt 24193596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 49219048 - 49219151
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    |||||||||  | ||||||||||| | || ||| ||||||| ||||  ||||||||| |||||||| |||||||| ||||||| ||||||||||||||||    
T  49219048 ttatagcattggcgcttatcatatgagtggttaggtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttg 49219147  T
Q  292 tttt 295  Q
    ||||    
T  49219148 tttt 49219151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 21157686 - 21157780
Alignment:
Q  201 aagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||| ||||||||||| ||||||||||| |||||||   |||||||| |||||| | |||||||||| ||||| | ||||||||||| ||||||    
T  21157686 aagtgtttatcatataagtgcttatgtatcagctattttgataacaaagtataaactaaagtcaaactgttttcatgtaagctataagatgtttt 21157780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 47970228 - 47970309
Alignment:
Q  193 tatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttc 274  Q
    |||||| ||||  ||| |||||||| |||||||||||||||||||  |||||||||  ||||||| ||||||||||||||||    
T  47970228 tatagcgtaaggacttgtcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttc 47970309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 293
Target Start/End: Complemental strand, 2980626 - 2980526
Alignment:
Q  198 cataagtgcttatcatataaatgcttatgtataagctattcatataacaaattat-----aaaattaagtcaaactattttcttataagctataagttgt 292  Q
    |||||||| ||||||||||| |||||||||||||||||||  |||||||||  ||     ||||| |||||||||||||||| || ||| ||||||||||    
T  2980626 cataagtgtttatcatataagtgcttatgtataagctatttctataacaaaaaatgaaacaaaataaagtcaaactattttcatacaagttataagttgt 2980527  T
Q  293 t 293  Q
    |    
T  2980526 t 2980526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 22684677 - 22684586
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagct 283  Q
    ||||| |||| | ||||||||||||||||||| |||||||||||||  |||||||||   |||||| |||||||| | ||||| ||||||||    
T  22684677 ttataccatatgcgcttatcatataaatgcttctgtataagctatttctataacaaacggtaaaataaagtcaaattgttttcatataagct 22684586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 24160643 - 24160553
Alignment:
Q  205 gcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||||| |||||||  ||||||| ||  |||||||||  |||| || || ||||||||||||| | ||||||||||||||||||    
T  24160643 gcttatcatataagtgcttataaataagctttttctataacaaaagataatataaattcaaactattttcatgtaagctataagttgtttt 24160553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 46053583 - 46053653
Alignment:
Q  166 tttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctat 236  Q
    ||||||||||||||| ||| ||||  ||||||||| ||| |||||||||||| | ||||||||||||||||    
T  46053583 tttggataaacagcttaattaagcgcttatagcatgagtacttatcatataagtacttatgtataagctat 46053653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 54325184 - 54325102
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataag 288  Q
    |||||||||||| ||||| ||||||| |||||  ||| |||||  ||||||| |||||||||| ||||| |||||||||||||    
T  54325184 cttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataag 54325102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 19422335 - 19422420
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    |||| |||||||||||||||||||||||||||| ||||  |||||||||  ||| ||| |||||||||  ||||| ||||| ||||    
T  19422335 taagcgcttatcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaaacatttttcatataaactat 19422420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 30207717 - 30207629
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||| |||||||||||| | || |  |||||||||  ||||||| || ||||||| ||||| ||||||||||||||||||||    
T  30207717 cttatcatataagtgcttatgtatatgttagttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttgtttt 30207629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 24929373 - 24929505
Alignment:
Q  163 ctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagt 262  Q
    ||||||||||||||| || |||  ||  |||||| |||||   |||||||||||| || || ||||| | |||||  |||||||||  ||||||| ||||    
T  24929373 ctgtttggataaacaacttaattgagtgtttataacataatctcttatcatataattgtttttgtatgaactatttctataacaaaagataaaataaagt 24929472  T
Q  263 caaactattttcttataagctataagttgtttt 295  Q
    | |||| ||||| || |||||||||||||||||    
T  24929473 ctaactgttttcataaaagctataagttgtttt 24929505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 295
Target Start/End: Complemental strand, 8423025 - 8422897
Alignment:
Q  165 gtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtca 264  Q
    ||||||||||||| || ||| |||  ||||||||||||     |||||||||  |||||||||||||||||||  ||||| |||  ||||||| |||||     
T  8423025 gtttggataaacaacttaattaagtgtttatagcataatcatgtatcatatatgtgcttatgtataagctatttttataaaaaaagataaaataaagtc- 8422927  T
Q  265 aactattttcttataagctataagttgtttt 295  Q
     | | ||||| ||||||||||||||||||||    
T  8422926 -attgttttcatataagctataagttgtttt 8422897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 43932316 - 43932387
Alignment:
Q  166 tttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||||||| | ||| ||||| ||||| |||||||| |||||||| || ||||||||||||| |||||    
T  43932316 tttggataaacagattaattaagcacttataacataagtgtttatcatacaagtgcttatgtataaactatt 43932387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 46796927 - 46797030
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    ||||| |||||||||||||||||||| | |||||| ||||||||||   ||||||||  ||||||| || ||||  | ||| | |||||| |||||||||    
T  46796927 ttataacataagtgcttatcatataagttcttatgcataagctattttcataacaaacgataaaataaattcaatatgtttccatataagttataagttg 46797026  T
Q  292 tttt 295  Q
    ||||    
T  46797027 tttt 46797030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 293
Target Start/End: Original strand, 4071811 - 4071892
Alignment:
Q  211 catataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtt 293  Q
    ||||||| || |||| ||||| |||||  |||||||||  ||||||| |||||||| ||||||| ||||||||||||||||||    
T  4071811 catataagtgtttatatataa-ctatttctataacaaaagataaaataaagtcaaattattttcatataagctataagttgtt 4071892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 4243220 - 4243321
Alignment:
Q  163 ctgtttggataaacagctaaatcaagcatttat-agcataagtgcttatcatataaatgcttatgtataa-gctattcatataacaaattataaaattaa 260  Q
    |||||||||||||||||| ||| |||   |||| |||||||| ||||||||||||| ||||| ||||||| ||||||| ||| ||||| |||||||| ||    
T  4243220 ctgtttggataaacagcttaattaagtgcttattagcataagcgcttatcatataagtgcttgtgtataatgctattcttat-acaaaatataaaataaa 4243318  T
Q  261 gtc 263  Q
    |||    
T  4243319 gtc 4243321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 4663856 - 4663766
Alignment:
Q  193 tatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagct 283  Q
    ||||||||| | | ||||| ||||| |||||||||||||| ||||  |||||||||  ||||||| ||| |||||||||||  ||||||||    
T  4663856 tatagcatatgcgtttatcgtataagtgcttatgtataagttatttctataacaaagaataaaatgaagccaaactatttttatataagct 4663766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 237
Target Start/End: Complemental strand, 9843820 - 9843782
Alignment:
Q  199 ataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  9843820 ataagtgcttatcatataactgcttatgtataagctatt 9843782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 296
Target Start/End: Original strand, 50745931 - 50746013
Alignment:
Q  214 ataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgttttt 296  Q
    |||||||||||||| |||||||||  |||||||||  ||||||| || ||||||| ||||  ||||| ||| |||||||||||    
T  50745931 ataaatgcttatgtctaagctatttttataacaaaagataaaataaaatcaaactgtttttatataaactacaagttgttttt 50746013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 55437445 - 55437354
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    |||||| |||| || |||||||||||  | |||| |||||||||||  ||||||||  |||||||| |||||||| ||||||| ||||||||||    
T  55437445 ttatagtataattggttatcatataagcgattatctataagctatttctataacaa--tataaaataaagtcaaattattttcatataagctat 55437354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 24160926 - 24160999
Alignment:
Q  219 tgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgt 292  Q
    |||||||||||||||||||  |||||||||  ||||||| |||| ||| ||||||| | || ||||||||||||    
T  24160926 tgcttatgtataagctatttctataacaaaggataaaatcaagttaaattattttcatgtaggctataagttgt 24160999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 280
Target Start/End: Original strand, 36734817 - 36734890
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataa 280  Q
    ||||||||||| ||||||||||||| || ||  |||||||||   |||||| |||||||||||||||| |||||    
T  36734817 ttatcatataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaaactattttcatataa 36734890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 295
Target Start/End: Complemental strand, 42322010 - 42321937
Alignment:
Q  222 ttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||| ||||||||||  |||||||||| ||||||| |||||||| | ||||| |||||  |||||||||||||    
T  42322010 ttatgaataagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagttgtttt 42321937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 45128457 - 45128368
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||||   ||||||||||| |||||  |||||||||  ||||||| || ||||| |||| || |||||||||||| |||||||    
T  45128457 cttatcatataagaacttatgtataaactatttctataacaaaagataaaatcaaatcaaattattctcatataagctataaattgtttt 45128368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 51556013 - 51555956
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtca 264  Q
    ||||||||||| |||||||||||||||||||  |||||||||  ||||||| ||||||    
T  51556013 ttatcatataagtgcttatgtataagctattattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 4191663 - 4191731
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattat-aaaattaagtcaaactattttc 274  Q
    ||||||||||| |||||||||||||||||||  |||||||||  || ||||| |||||||||| |||||    
T  4191663 ttatcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttc 4191731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 27043963 - 27043887
Alignment:
Q  220 gcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgttttt 296  Q
    ||||||||||||| || | ||||||||||  ||||||| |||| ||| | ||||| ||||||||||||| |||||||    
T  27043963 gcttatgtataaggtacttatataacaaaggataaaataaagttaaattgttttcgtataagctataagatgttttt 27043887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 30581779 - 30581735
Alignment:
Q  251 ataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||    
T  30581779 ataaaatgaagtcaaactattttcgtataagctataagctgtttt 30581735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 485960 - 486035
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||||| |||  || ||| ||||  |||||||||||| |||||||||| || |||||||||||| ||||||    
T  485960 cctgtttggatgaactacttaattaagcgcttatagcataagcgcttatcataaaagtgcttatgtatatgctatt 486035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 286
Target Start/End: Original strand, 23676625 - 23676720
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaatt-ataaaattaagtcaaactattttcttataagctata 286  Q
    ||||||| ||| ||||| |||||||| ||||| ||||||| ||||| ||| || |||   ||||||| ||||| ||||||||| ||||||||||||    
T  23676625 ttatagcttaaatgcttgtcatataagtgcttttgtataatctatttatacaataaaaagataaaataaagtcgaactatttttttataagctata 23676720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 25487692 - 25487613
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    |||||| | |||||||||||||||||||||||  |||||||||  ||||||| ||||||   | ||||| ||||||||||    
T  25487692 cttatcctttaaatgcttatgtataagctatttctataacaaaaaataaaataaagtcacgtttttttcatataagctat 25487613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 50742986 - 50742923
Alignment:
Q  201 aagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtca 264  Q
    |||||||||||||||||  ||||||| ||||||||||  ||||||| |  ||||||||||||||    
T  50742986 aagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 50742923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 287
Target Start/End: Original strand, 53155182 - 53155267
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    |||| |||||||||||  ||||||||||||||||||||  |||||||||  || |||| ||||| |||||||||| |||| |||||||    
T  53155182 taagcgcttatcatatgcatgcttatgtataagctatt-ttataacaaaagat-aaataaagtcgaactattttcatatatgctataa 53155267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 55994334 - 55994283
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaat 257  Q
    ||||| ||||||||||||||||||||||||||  ||||| ||| ||||||||    
T  55994334 cttattatataaatgcttatgtataagctatttctataagaaaatataaaat 55994283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 5219691 - 5219573
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    ||||||| |||||||| |  ||| ||| | ||||| ||||| || ||||||||||| |||| ||||||| |||||   ||||| |||  ||||||| |||    
T  5219691 cctgtttagataaacaacataattaagaacttataacataattgattatcatataagtgctcatgtatatgctatctctataataaaagataaaataaag 5219592  T
Q  262 tcaaactattttcttataa 280  Q
    | ||||||||||| |||||    
T  5219591 ttaaactattttcatataa 5219573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 284
Target Start/End: Original strand, 44319861 - 44319950
Alignment:
Q  194 atagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagcta 284  Q
    ||||||||||  |||||||||||| |||| |||||||| |||||  ||||| |||  ||||||| ||||| |||| ||||| |||||||||    
T  44319861 atagcataagcacttatcatataagtgctcatgtataaactatttctataa-aaaagataaaataaagtcgaactgttttcatataagcta 44319950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 295
Target Start/End: Original strand, 49085939 - 49086001
Alignment:
Q  233 ctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||| ||||||||||  ||||||| | |||||||||||||| || ||| |||||||||||||    
T  49085939 ctatttatataacaaaagataaaataatgtcaaactattttcatacaagttataagttgtttt 49086001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 54414865 - 54414903
Alignment:
Q  199 ataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  54414865 ataagcgcttatcatataagtgcttatgtataagctatt 54414903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 27623579 - 27623640
Alignment:
Q  227 tataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataag 288  Q
    |||||| ||||  |||||||||  ||||||| |||||||||||||||  |||||||||||||    
T  27623579 tataagatatttgtataacaaaagataaaataaagtcaaactattttaatataagctataag 27623640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 30338726 - 30338649
Alignment:
Q  219 tgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgttttt 296  Q
    ||||||||||||| |||||  |||||||||  ||| ||| |||| ||||| ||||| ||||||||||||  |||||||    
T  30338726 tgcttatgtataaactatttctataacaaaagatagaataaagttaaactgttttcatataagctataaactgttttt 30338649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 32724041 - 32724118
Alignment:
Q  205 gcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagc 282  Q
    |||| |||||| | ||||||||| ||| |||||  ||| |||||  ||||||| |||||||||||||||| |||||||    
T  32724041 gcttctcatatcagtgcttatgtctaatctatttctattacaaaagataaaataaagtcaaactattttcatataagc 32724118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 45516665 - 45516722
Alignment:
Q  192 ttatagcataagtgcttatcat-ataaatgcttatgtataagctattcatataacaaa 248  Q
    ||||||||||| || ||||||| ||||||| ||||||||||| ||||| |||||||||    
T  45516665 ttatagcataaatgtttatcatgataaatgtttatgtataagttattcctataacaaa 45516722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 280
Target Start/End: Original strand, 3020344 - 3020432
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataa 280  Q
    ||||||| |||||| ||||||||||||| || ||| ||||||||||    |||||||  ||||||  || ||||||||||||| |||||    
T  3020344 ttatagcgtaagtgtttatcatataaatactcatgaataagctatttccgtaacaaaggataaaagaaaatcaaactattttcatataa 3020432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 295
Target Start/End: Original strand, 11802475 - 11802546
Alignment:
Q  223 tatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||||||| |||||||||  ||||||| |||||||| | || ||  |||||||| ||||||||||    
T  11802475 tatgtataagctattc-tataacaaaagataaaataaagtcaaatttttctcacataagctacaagttgtttt 11802546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 21593145 - 21593078
Alignment:
Q  219 tgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    ||||||||||||| |||||  |||||| ||  ||||||| ||||||| |||||||| ||||||||||||    
T  21593145 tgcttatgtataaactatttctataactaaagataaaataaagtcaa-ctattttcatataagctataa 21593078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 30024624 - 30024704
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    ||||||||||| | |||||| ||||| ||||  |||||||||  ||||||| |||| ||| | ||||| ||||||||||||    
T  30024624 ttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 41603534 - 41603498
Alignment:
Q  210 tcatataaatgcttatgtataagctattcatataaca 246  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  41603534 tcatataagtgcttatgtataagctatttatataaca 41603498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 295
Target Start/End: Complemental strand, 46415954 - 46415850
Alignment:
Q  191 tttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagtt 290  Q
    |||||||||| ||| |||||||| ||| |||||| ||||||||||||   ||||||||  |||||||    ||||||| ||||| || ||| ||||||||    
T  46415954 tttatagcatcagtacttatcatctaagtgcttacgtataagctatttcaataacaaaagataaaataggatcaaactgttttcatacaagttataagtt 46415855  T
Q  291 gtttt 295  Q
     ||||    
T  46415854 ctttt 46415850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 295
Target Start/End: Complemental strand, 55870471 - 55870399
Alignment:
Q  223 tatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||| | |||  |||||||||  || |||| |||||||||| |||||  |||||||||||||||||||    
T  55870471 tatgtataatccatttttataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgtttt 55870399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 8e-21; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 22232749 - 22232824
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataag 281  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||||| ||||| ||||||    
T  22232749 cttatcatataaatgctcatgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataag 22232824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 295
Target Start/End: Complemental strand, 43116617 - 43116486
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc 263  Q
    |||||||||||||| || |||  ||  |||||||||||| || |||||||| || || |||||| |||||||||  |||||||||  ||||||| || ||    
T  43116617 tgtttggataaacaacttaatttagtgtttatagcataaatgtttatcatacaagtgtttatgtgtaagctatttctataacaaaagataaaatcaaatc 43116518  T
Q  264 aaactattttcttataagctataagttgtttt 295  Q
    |||| |||||| |||||||||||||| |||||    
T  43116517 aaacaattttcatataagctataagtcgtttt 43116486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 166 - 295
Target Start/End: Complemental strand, 32555169 - 32555039
Alignment:
Q  166 tttggataaacagctaaatcaagcatttatagcat-aagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtca 264  Q
    |||||||||||| || ||||||||  ||||||||| ||||||||||  |||||   || |||||||||| |||  || ||||||  ||||||| ||||||    
T  32555169 tttggataaacaacttaatcaagcgcttatagcattaagtgcttattgtataagcactcatgtataagcaattattacaacaaaagataaaataaagtca 32555070  T
Q  265 aactattttcttataagctataagttgtttt 295  Q
    || ||||||| ||||||||||||||||||||    
T  32555069 aattattttcctataagctataagttgtttt 32555039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 28779278 - 28779370
Alignment:
Q  205 gcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttttg 297  Q
    ||||||||||||| ||||| |||||||||| ||  |||||||    || |||| |||||||||||||||| ||||||||||||||||||||||    
T  28779278 gcttatcatataattgcttttgtataagctgtttttataacatcagatgaaataaagtcaaactattttcatataagctataagttgtttttg 28779370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 297
Target Start/End: Complemental strand, 20192740 - 20192662
Alignment:
Q  219 tgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttttg 297  Q
    ||||||||||||||||||| ||||||||||  ||||||| |||||||||  ||||| ||||| ||||||| ||||||||    
T  20192740 tgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttttg 20192662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 41029012 - 41028919
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||  |||||||||  | ||||| ||||||| || |||||  |||||||||    
T  41029012 ttatagcttaaatgcttatcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaatctgttttcaaataagctat 41028919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 19679433 - 19679385
Alignment:
Q  248 attataaaattaagtcaaactattttcttataagctataagttgttttt 296  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||    
T  19679433 attataaaataaagtcaaactgttttcttataagctataagttgttttt 19679385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 295
Target Start/End: Original strand, 27792796 - 27792884
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||| |||||||||||||||||||   | ||||||  ||||||| | |||||||||||||| ||||||||  ||||||||||    
T  27792796 ttatcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagctgcaagttgtttt 27792884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 12923466 - 12923383
Alignment:
Q  212 atataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||| ||||| |||||||||||||  | ||| |||  ||||||| ||||||||||  |||||||||||||||||||||||||    
T  12923466 atataagtgcttgtgtataagctattgctgtaataaaagataaaataaagtcaaactgctttcttataagctataagttgtttt 12923383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 273
Target Start/End: Original strand, 20504091 - 20504202
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||| |||||||||| ||| ||||  |||||| ||||  ||||||||| ||| ||||||||  ||||||| |  |||||||||| |||||| ||||    
T  20504091 cctgtttgaataaacagcttaattaagcgcttatagtataaaggcttatcatttaagtgcttatgcctaagctacttctataacaaatgataaaaataag 20504190  T
Q  262 tcaaactatttt 273  Q
    ||||||| ||||    
T  20504191 tcaaactgtttt 20504202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 28843030 - 28842973
Alignment:
Q  180 taaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||| ||||| ||||| |||||| ||||||||||||| |||||||||||||||||||    
T  28843030 taaattaagcacttatatcataagcgcttatcatataagtgcttatgtataagctatt 28842973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 295
Target Start/End: Complemental strand, 23530378 - 23530242
Alignment:
Q  161 acctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaa-tgcttatgtataagctattcatataacaaattataaaatta 259  Q
    ||||||||||||||||  || ||| |||||||||||| ||| |  ||||||||||||| |||||| ||| |||||| |  | |||||||  ||||||| |    
T  23530378 acctgtttggataaaccacttaattaagcatttatagaatatgcacttatcatataaagtgcttacgtagaagctagttttctaacaaaagataaaataa 23530279  T
Q  260 agtcaaacta-ttttcttataagctataagttgtttt 295  Q
    ||||||| || ||||| |||||  |||||||||||||    
T  23530278 agtcaaattatttttcatataaagtataagttgtttt 23530242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 285
Target Start/End: Original strand, 36199997 - 36200118
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||||| || | ||  ||||  ||||| |||||| ||||||||||||| | ||||||||| ||||||| || |||||||| ||||||| ||     
T  36199997 cctgtttggataaaaagtttaaataagcgcttataacataagagcttatcatataagttcttatgtatcagctatttatgtaacaaatgataaaataaac 36200096  T
Q  262 tcaaactattttcttataagctat 285  Q
    ||  | | ||||||||||||||||    
T  36200097 tc--attgttttcttataagctat 36200118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 2519583 - 2519650
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataa 231  Q
    |||||||||||||| || |||||||| |||||| ||||||||||||||||| || | || ||||||||    
T  2519583 tgtttggataaacaacttaatcaagcgtttataacataagtgcttatcatagaagtactaatgtataa 2519650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 3757960 - 3758039
Alignment:
Q  195 tagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttc 274  Q
    ||||||||||| ||||  | ||| |||||||||||||||||||  | ||||||| |||||||| |||||||||| |||||    
T  3757960 tagcataagtgtttattgtgtaagtgcttatgtataagctatttttgtaacaaaatataaaataaagtcaaactcttttc 3758039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 33307727 - 33307652
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataag 281  Q
    |||||||||||| |||||||||||||||||||    ||||||| ||| |||| |||||||| ||||||| ||||||    
T  33307727 cttatcatataagtgcttatgtataagctatttcagtaacaaaatatgaaataaagtcaaattattttcatataag 33307652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 296
Target Start/End: Complemental strand, 40122884 - 40122810
Alignment:
Q  221 cttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgttttt 296  Q
    |||||||||||||||||   ||||||||  ||||||| |||||||||| ||||| || ||||||||||||||||||    
T  40122884 cttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagttgttttt 40122810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 43038887 - 43038765
Alignment:
Q  172 taaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactatt 271  Q
    ||||||||  ||| ||||| |||||||||| |  ||||  | |||| |||||||||| ||| ||||  ||| |||||   |||||||||||||||||| |    
T  43038887 taaacagcctaattaagcacttatagcatacgctcttactacataagtgcttatgtacaagttatttctatgacaaaaagtaaaattaagtcaaacta-t 43038789  T
Q  272 ttcttataagctataagttgtttt 295  Q
    ||| ||||||||||||||||||||    
T  43038788 ttcatataagctataagttgtttt 43038765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 51278303 - 51278236
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttc 274  Q
    ||||||||||| |||| ||||||||||||||  ||||||||| ||| |||| |||||||||| |||||    
T  51278303 ttatcatataattgctaatgtataagctatttctataacaaaatattaaataaagtcaaactgttttc 51278236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 1395611 - 1395673
Alignment:
Q  223 tatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    |||||||||||||||  |||||||||  ||||||| |||||||| ||||||| ||||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctat 1395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 293
Target Start/End: Original strand, 32703062 - 32703148
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtt 293  Q
    |||||||||||||| ||||||||||||||||  ||| | |||  ||||||| || ||||| | ||||| |||||||||||| |||||    
T  32703062 ttatcatataaatgtttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataaattgtt 32703148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 38462204 - 38462285
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    |||||||||||| || |||| |||||||||||  |||| ||||  ||||||| |||||||||| ||||| |||| |||||||    
T  38462204 cttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataa 38462285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 1816491 - 1816595
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcat-ataacaaattataaaattaagtcaaactattttcttataagctataagtt 290  Q
    ||||||||||| || |||||||||||  ||| |||||||| |||||  | |||| |||  ||||||| |||||||||| ||||  |||||| ||||||||    
T  1816491 ttatagcataattgtttatcatataagagctaatgtataaactattttttataataaaagataaaataaagtcaaactgtttttgtataagatataagtt 1816590  T
Q  291 gtttt 295  Q
    |||||    
T  1816591 gtttt 1816595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 41724117 - 41724165
Alignment:
Q  189 catttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||||||||||||| || |||||| |||||||||| ||||||||    
T  41724117 catttatagcataagtgctcattatataagtgcttatgtacaagctatt 41724165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 659965 - 659903
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactatttt 273  Q
    |||||||||||||||||||| ||||||||||     |||||||  ||||||| |||||||||||||||    
T  659965 cttatcatataaatgcttatatataagctat-----taacaaaagataaaataaagtcaaactatttt 659903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 13481253 - 13481304
Alignment:
Q  241 ataacaaattataaaattaagtcaaactattttcttataagctataagttgt 292  Q
    |||||||| |||||||| ||||||||||||||||  |||||||| |||||||    
T  13481253 ataacaaaatataaaataaagtcaaactattttcaaataagctacaagttgt 13481304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 16790502 - 16790435
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttc 274  Q
    ||||||||||| |||||||||||||||||||  ||||||||   ||||||| || ||||| |||||||    
T  16790502 ttatcatataagtgcttatgtataagctatttttataacaacagataaaataaaatcaaattattttc 16790435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 37788786 - 37788872
Alignment:
Q  208 tatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| || || ||||||||||| ||||  |||||||||  ||||||| ||||| || ||||||| ||||| ||||||||||||||    
T  37788786 tatcatacaagtgtttatgtataagttattt-tataacaaaagataaaataaagtccaattattttcgtataatctataagttgtttt 37788872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 295
Target Start/End: Complemental strand, 24235811 - 24235741
Alignment:
Q  225 tgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||| ||||  |||||||||  |||| || ||||||||||||||   ||||||||||||||||||||    
T  24235811 tgtataagttatttctataacaaaagataatataaagtcaaactatttgaatataagctataagttgtttt 24235741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 36101477 - 36101579
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    ||||||||||  ||||||||| |||| || ||||| ||||||||||  | ||| | |  ||||||| ||||||||||  |||| ||||| ||||||||||    
T  36101477 ttatagcatacatgcttatcaaataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataatctataagttg 36101576  T
Q  292 ttt 294  Q
    |||    
T  36101577 ttt 36101579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 36139787 - 36139889
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    ||||||||||  ||||||| | |||| || ||||| ||||||||||  | ||| | |  ||||||| ||||||||||  |||| ||||||||||||||||    
T  36139787 ttatagcatacatgcttattaaataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataagctataagttg 36139886  T
Q  292 ttt 294  Q
    |||    
T  36139887 ttt 36139889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 44374793 - 44374731
Alignment:
Q  204 tgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaa 266  Q
    |||||||||||||| ||||||||||||||||||   | |||||||  ||||||| ||||||||    
T  44374793 tgcttatcatataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaaa 44374731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 49587042 - 49586984
Alignment:
Q  227 tataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    |||||||||||  |||||||||  ||||||| |||||||||| ||||| ||||||||||    
T  49587042 tataagctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 16790249 - 16790184
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaat 257  Q
    |||||||||||| | ||||||||||| ||||||| |||||| ||||  |||||||||  |||||||    
T  16790249 ttatagcataagcgtttatcatataagtgcttatatataagttatttctataacaaaagataaaat 16790184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 20349629 - 20349548
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataag 281  Q
    |||||||||||||||||| || || |||||||||||||    |||||||  ||||||| ||||| || ||||||| ||||||    
T  20349629 taagtgcttatcatataagtgtttgtgtataagctatttcagtaacaaaggataaaatgaagtctaattattttcatataag 20349548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 20874489 - 20874436
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataa 217  Q
    |||||||||||||| || ||| ||||| ||||||||||| ||| ||||||||||    
T  20874489 tgtttggataaacaacttaattaagcacttatagcataaatgcatatcatataa 20874436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 25964359 - 25964416
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaat 257  Q
    |||||||||||||||||| | ||| |||||||||||||  |||||||||  |||||||    
T  25964359 taagtgcttatcatataagttcttttgtataagctatttttataacaaaagataaaat 25964416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 34317998 - 34318071
Alignment:
Q  193 tatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaa 266  Q
    ||||||||||| ||||||  ||| | |||| | ||||||||||||  ||||||||| |||||||| ||||||||    
T  34317998 tatagcataagcgcttatggtatcagtgctcaagtataagctatttctataacaaaatataaaataaagtcaaa 34318071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 295
Target Start/End: Original strand, 48807683 - 48807720
Alignment:
Q  258 taagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||||||||| || |||||||||||||||||    
T  48807683 taagtcaaactattttcatagaagctataagttgtttt 48807720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 53457287 - 53457368
Alignment:
Q  193 tatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttc 274  Q
    |||||||||| || ||||||| ||| || ||| |||||||||| |   ||||||||  ||||||| ||||||||||||||||    
T  53457287 tatagcataactgattatcatttaagtgtttacgtataagctacttcgataacaaaagataaaataaagtcaaactattttc 53457368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 20195174 - 20195087
Alignment:
Q  205 gcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||||||||||||| ||||||||| |  |||||||||  |||||    |||||||||  |||| ||||| ||||||||| ||||    
T  20195174 gcttatcatataaatgcttatttataagctagttctataacaaaagataaa---gagtcaaactgctttcatataatctataagttatttt 20195087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 20502236 - 20502192
Alignment:
Q  193 tatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||||||| | |||||||||||||| ||||||| |||||||||||    
T  20502236 tatagcattaatgcttatcatataagtgcttatatataagctatt 20502192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 20807076 - 20807112
Alignment:
Q  259 aagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  20807076 aagtcaaactgttttcgtataagctataagttgtttt 20807112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 25185910 - 25185958
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaa 248  Q
    |||||| ||||||||||| |||||||| ||||| |||| ||||||||||    
T  25185910 taagtgtttatcatataagtgcttatgaataagatatttatataacaaa 25185958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 290
Target Start/End: Complemental strand, 33434148 - 33434069
Alignment:
Q  211 catataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttctta-taagctataagtt 290  Q
    ||||||| |||||||||||||| |||| | ||||||||  ||||||| ||||||||||| |||| ||  ||||||||||||    
T  33434148 catataagtgcttatgtataagatattta-ataacaaaagataaaataaagtcaaactactttcatacaaagctataagtt 33434069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 35246684 - 35246648
Alignment:
Q  260 agtcaaactattttcttataagctataagttgttttt 296  Q
    ||||||||||||||  |||||||||||||||||||||    
T  35246684 agtcaaactatttttatataagctataagttgttttt 35246648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 36445641 - 36445697
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaa 248  Q
    |||| ||||||||||||||||||| | |  ||||||||||||||||  |||||||||    
T  36445641 ttattgcataagtgcttatcatatgagtttttatgtataagctatttctataacaaa 36445697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 39971242 - 39971302
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaa 266  Q
    |||||||||||| |||||||||||||| || | ||||||||||  ||||||| ||| ||||    
T  39971242 cttatcatataagtgcttatgtataagttacttatataacaaaagataaaataaagccaaa 39971302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 41159031 - 41159091
Alignment:
Q  205 gcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaa 265  Q
    ||||||| ||||| |||||||||||||| ||||| |||||| ||  ||||||| |||||||    
T  41159031 gcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 41159091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 42754550 - 42754594
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctat 236  Q
    |||||||||| | ||||||||||||||||||||  ||||||||||    
T  42754550 ttatagcatatgcgcttatcatataaatgcttacatataagctat 42754594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 274
Target Start/End: Complemental strand, 44284213 - 44284137
Alignment:
Q  198 cataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttc 274  Q
    |||||| | ||||||||||| | || ||||||||||||||  |||||||||  ||||||  |||||||||| |||||    
T  44284213 cataagcgattatcatataagtactaatgtataagctatttctataacaaaaaataaaacaaagtcaaactgttttc 44284137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 287
Target Start/End: Complemental strand, 1264 - 1140
Alignment:
Q  163 ctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagt 262  Q
    |||| |||||||||| || ||| ||| | |||||||||||  |  |||||||||| |||||||||||||||||||  |||||||||  ||||||| ||||    
T  1264 ctgtgtggataaacaacttaattaagtacttatagcataaacgtctatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagt 1165  T
Q  263 caaactattttcttataagctataa 287  Q
    ||||||||| || ||||||| ||||    
T  1164 caaactattctcatataagccataa 1140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 287
Target Start/End: Original strand, 2711 - 2835
Alignment:
Q  163 ctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagt 262  Q
    |||| |||||||||| || ||| ||| | |||||||||||  |  |||||||||| |||||||||||||||||||  |||||||||  ||||||| ||||    
T  2711 ctgtgtggataaacaacttaattaagtacttatagcataaacgtctatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagt 2810  T
Q  263 caaactattttcttataagctataa 287  Q
    ||||||||| || ||||||| ||||    
T  2811 caaactattctcatataagccataa 2835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 295
Target Start/End: Original strand, 27455 - 27588
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||||||| || ||  || |  ||||||||||||  |||||||| ||| |||||||||||||| ||||  ||||||| |  ||||||| |||    
T  27455 cctgtttggataaacaacttaaataaacgcttatagcataagctcttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaag 27554  T
Q  262 tcaaactattttcttataagctataagttgtttt 295  Q
    ||||| | ||||| ||||| ||||||||||||||    
T  27555 tcaaattgttttcatataaactataagttgtttt 27588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 7274099 - 7273998
Alignment:
Q  193 tatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgt 292  Q
    |||||||||||||||||||||||||||||||||||||| | ||||  |||||||||  || |||| |||||||| | ||||| || ||| |||||| |||    
T  7274099 tatagcataagtgcttatcatataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgt 7274000  T
Q  293 tt 294  Q
    ||    
T  7273999 tt 7273998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 293
Target Start/End: Original strand, 37841908 - 37842008
Alignment:
Q  194 atagcataagtgcttatcat-ataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgt 292  Q
    ||||||||||  |||||||| |||| | || ||||||||||||||| |||||||||| ||||||| |||| ||| | ||||| ||||||||||| |||||    
T  37841908 atagcataagcacttatcatgataagtactcatgtataagctattcctataacaaatgataaaataaagttaaattgttttcgtataagctatatgttgt 37842007  T
Q  293 t 293  Q
    |    
T  37842008 t 37842008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 44236698 - 44236622
Alignment:
Q  186 aagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagt 262  Q
    ||||| ||||||||||||||||||||| |||| || || |||| ||||||||| |||||||||| ||||||| ||||    
T  44236698 aagcacttatagcataagtgcttatcacataagtgtttgtgtagaagctattcctataacaaatgataaaataaagt 44236622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 870962 - 871045
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagct 283  Q
    |||| ||||||||||||| ||||||||||||| |||||  |||||||||  |||||||||||||||  | ||||| ||||||||    
T  870962 taagcgcttatcatataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaattttttttcatataagct 871045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 287
Target Start/End: Original strand, 17420084 - 17420207
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc 263  Q
    ||||||||||||||||| ||| |||   |||||| ||||| ||||| || |||| | ||||||||||| |||||  ||||| |||  ||||||| |||||    
T  17420084 tgtttggataaacagcttaattaagtgattatagtataagcgcttagcacataagtacttatgtataaactatttttataagaaaagataaaataaagtc 17420183  T
Q  264 aaactattttcttataagctataa 287  Q
     ||| |||||| ||||||||||||    
T  17420184 gaacaattttcatataagctataa 17420207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 294
Target Start/End: Complemental strand, 30259673 - 30259546
Alignment:
Q  167 ttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaa 266  Q
    ||||||||||| || ||| ||||| ||||| ||||    ||||||||| || |||||||| | ||||||||  ||||||||| |||||||| ||||||||    
T  30259673 ttggataaacaacttaataaagcacttataacatacacacttatcatagaagtgcttatgcacaagctatttctataacaaaatataaaataaagtcaaa 30259574  T
Q  267 ctattttcttataagctataagttgttt 294  Q
    ||  |||  ||||||||||||| |||||    
T  30259573 ctgctttgatataagctataagctgttt 30259546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 50764564 - 50764441
Alignment:
Q  164 tgtttggataaacag-ctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcata-taacaaattataaaattaag 261  Q
    ||||||||||||||  || ||| |||||||||||| ||| |||||||||||| || |||||||||||||||||||  ||  || ||| || ||||| |||    
T  50764564 tgtttggataaacaaacttaattaagcatttatagaatatgtgcttatcatacaattgcttatgtataagctatttctacaaaaaaaatacaaaatgaag 50764465  T
Q  262 tcaaactattttcttataagctat 285  Q
    ||||||| ||||  ||||||||||    
T  50764464 tcaaactgtttttatataagctat 50764441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 287
Target Start/End: Complemental strand, 43372119 - 43372025
Alignment:
Q  193 tatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    ||||||||||| |||||||||||||  ||||||||||| ||||||  ||||||||   |||||||  ||||||| |||||||  |||||||||||    
T  43372119 tatagcataagcgcttatcatataatggcttatgtataggctatttctataacaatagataaaatagagtcaaattattttcacataagctataa 43372025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 295
Target Start/End: Complemental strand, 40304221 - 40304112
Alignment:
Q  186 aagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    ||||| ||||||  |||||| ||||||||| | |||||| |||||||||||| ||||||||||  ||||||| || ||| | | ||||| |||||| |||    
T  40304221 aagcacttatagtgtaagtgtttatcatattattgcttaggtataagctatttatataacaaaagataaaataaaatcacattgttttcatataagttat 40304122  T
Q  286 aagttgtttt 295  Q
    ||| ||||||    
T  40304121 aagctgtttt 40304112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 52013783 - 52013851
Alignment:
Q  169 ggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    ||||||||| || ||| || | |||||||||||| | |||||||| |||||||||||||||||||||||    
T  52013783 ggataaacaacttaattaaacgtttatagcataaatacttatcatgtaaatgcttatgtataagctatt 52013851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 285
Target Start/End: Complemental strand, 29794109 - 29793991
Alignment:
Q  166 tttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaa 265  Q
    ||||||||||||||| ||| ||||  |||||||||||||| || |||||||  || ||||||||| ||||||  | |||||||  |||||| ||||||||    
T  29794109 tttggataaacagcttaattaagcgcttatagcataagtgtttttcatatatgtgtttatgtataggctatttttgtaacaaaagataaaa-taagtcaa 29794011  T
Q  266 actattttcttataagctat 285  Q
    | | |||||  |||||||||    
T  29794010 attgttttcaaataagctat 29793991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 45107548 - 45107626
Alignment:
Q  208 tatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    |||||||||| ||||||| |||||||||||  ||||| |||  ||||||| |||||||||||||||| |||||| |||||    
T  45107548 tatcatataagtgcttatctataagctatttctataagaaaa-ataaaataaagtcaaactattttcatataagttataa 45107626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 15360833 - 15360903
Alignment:
Q  222 ttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgt 292  Q
    |||||||| || ||||  |||||||||  ||||||| |||||||||| ||||| |||||||||||||||||    
T  15360833 ttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagttgt 15360903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 29007848 - 29007774
Alignment:
Q  221 cttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| |||| ||||  |||||||||  | ||| | |||||||||||||||| ||||||||||||||||||||    
T  29007848 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaactattttcatataagctataagttgtttt 29007774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 295
Target Start/End: Original strand, 15437842 - 15437975
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    ||||||| ||||||||||| | | | ||| ||||||||  || | ||||||| ||  || ||||||| ||||||||  |||||||||  |||||||||||    
T  15437842 cctgtttagataaacagcttagtgaggcacttatagcactagcgattatcatctatgtgtttatgtaaaagctatttctataacaaaaaataaaattaag 15437941  T
Q  262 tcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| |||||  || ||| | ||||||||||    
T  15437942 tcaaactgttttcaaatcagccagaagttgtttt 15437975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 289
Target Start/End: Complemental strand, 45990211 - 45990122
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagt 289  Q
    |||| |||||||||| ||||||| ||||||| ||||||  |||| ||||  ||||||| |||| ||| | ||||| ||||||||||||||    
T  45990211 taagagcttatcatacaaatgctaatgtatatgctatttttatatcaaaagataaaataaagtaaaattgttttcatataagctataagt 45990122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 294
Target Start/End: Complemental strand, 4019782 - 4019651
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||||||| || |||  |||| |||| ||| ||| |||||| ||||||||| ||||| |||||  |||  ||| |||||| ||||||| |||    
T  4019782 cctgtttggataaacaacttaatttagcacttatggcaaaagcgcttataatataaatgtttatgaataagtaatttctat-acaaatgataaaatcaag 4019684  T
Q  262 tcaaactattttcttataagctataagttgttt 294  Q
    |||||   ||||| | ||||||||||| |||||    
T  4019683 tcaaatagttttcatgtaagctataagctgttt 4019651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 295
Target Start/End: Complemental strand, 5422061 - 5421978
Alignment:
Q  211 catataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| ||||||| |||||||||||   || |||||  |||||||  ||||||| | ||||||||||||||||||||||||||    
T  5422061 catataagtgcttat-tataagctatttccatgacaaaagataaaatatagtcaaattgttttcttataagctataagttgtttt 5421978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 288
Target Start/End: Complemental strand, 6031670 - 6031544
Alignment:
Q  160 gacctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaatta 259  Q
    |||||| |||||||||||||| ||| ||    ||||||||||||| | |||||||||| ||||| |||||||||| ||  ||||||||| |||||||| |    
T  6031670 gacctgcttggataaacagctcaattaaatgcttatagcataagtac-tatcatataactgctt-tgtataagctgttactataacaaaatataaaataa 6031573  T
Q  260 agtcaaactattttcttataagctataag 288  Q
     | |||||| ||||| || || |||||||    
T  6031572 tgccaaactgttttcataaaaactataag 6031544  T

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Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 285
Target Start/End: Original strand, 23895239 - 23895338
Alignment:
Q  186 aagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctat 285  Q
    ||||| ||| ||||||||  |||||||||||| |  ||||||||||||||||  |||||||||  ||||||| || ||||||| || || |||| |||||    
T  23895239 aagcacttaaagcataagcccttatcatataagttattatgtataagctatttctataacaaaagataaaataaattcaaactgttctcatatatgctat 23895338  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 295
Target Start/End: Original strand, 4200139 - 4200241
Alignment:
Q  193 tatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgt 292  Q
    |||||||||||  |||||||| ||| || |||| |||||| ||||  |||||||||  ||||||| |||||||  | ||||| |||||||||||  ||||    
T  4200139 tatagcataagcacttatcatctaagtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctatatattgt 4200238  T
Q  293 ttt 295  Q
    |||    
T  4200239 ttt 4200241  T

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Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 287
Target Start/End: Complemental strand, 4256198 - 4256108
Alignment:
Q  198 cataagtgcttatcat-ataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    |||||||||||||||| |||  || ||||||||||||||||  || ||||||  ||| ||| |||| ||| ||||||| ||||||||||||    
T  4256198 cataagtgcttatcatgatacgtgtttatgtataagctatttctacaacaaaagatacaataaagttaaattattttcgtataagctataa 4256108  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 273
Target Start/End: Complemental strand, 9507162 - 9507080
Alignment:
Q  192 ttatagcataagtgcttatcat-ataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactatttt 273  Q
    |||||||||||||||||||||| |||||  || ||||||||||||||  |||||||||   |||||| | || ||||||||||    
T  9507162 ttatagcataagtgcttatcataataaacactcatgtataagctatttctataacaaaagttaaaataatgttaaactatttt 9507080  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 274
Target Start/End: Complemental strand, 23373443 - 23373369
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttc 274  Q
    |||||||||||||||||| |||||| |||| |||||||  |||| ||||  ||||||| ||||||| || |||||    
T  23373443 taagtgcttatcatataactgcttacgtattagctatttctatatcaaaagataaaataaagtcaatctgttttc 23373369  T

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Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 43112870 - 43112908
Alignment:
Q  199 ataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  43112870 ataaatgcttatcatataaatgctcatgtataagctatt 43112908  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 48282055 - 48282125
Alignment:
Q  205 gcttatcatataaatgcttatgtataagctattcatataaca-aattataaaattaagtcaaactattttc 274  Q
    ||||||||||||| |||||||||| ||||||||  ||||| | ||  ||||||| ||||||||||||||||    
T  48282055 gcttatcatataagtgcttatgtaaaagctatttctataaaagaaagataaaataaagtcaaactattttc 48282125  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 49516984 - 49517082
Alignment:
Q  198 cataagtgcttatcatataaat-gcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||| | ||||||||||||| | || |||||||| ||||  |||||||||  ||||||| |||||||| | ||||| | ||||||||||| ||||||    
T  49516984 cataagcgtttatcatataaattgtttgtgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgtttt 49517082  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 52286600 - 52286682
Alignment:
Q  205 gcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    |||||||||||||  ||||||| ||||| ||||  || ||||||  ||||||| |||| |||| |||||| ||||||||||||    
T  52286600 gcttatcatataagcgcttatgaataagatatttctacaacaaaagataaaataaagttaaacaattttcatataagctataa 52286682  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 17269177 - 17269262
Alignment:
Q  210 tcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||| |||||||||||||| ||||  || ||||||    ||||| |||||||| | ||||| ||||||| ||||||||||||    
T  17269177 tcatataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgtttt 17269262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 21002079 - 21002156
Alignment:
Q  209 atcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctata 286  Q
    ||||||||| |||||||||||||||| |||   ||||| | |||||||| |||||||||| ||||  | |||||||||    
T  21002079 atcatataagtgcttatgtataagctgttctggtaacataatataaaataaagtcaaactgtttttatgtaagctata 21002156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 273
Target Start/End: Complemental strand, 33339573 - 33339500
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactatttt 273  Q
    |||||| ||||||||||  || ||||||||||||||||  |||| ||||  ||||||| |||| ||||||||||    
T  33339573 taagtggttatcatataggtgtttatgtataagctatttctataccaaaagataaaatgaagttaaactatttt 33339500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 295
Target Start/End: Complemental strand, 36151636 - 36151563
Alignment:
Q  222 ttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||||||||   ||||||||  ||||||| |||||||| | ||||| |||||| ||||| |||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataagttataaattgtttt 36151563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 37818375 - 37818460
Alignment:
Q  194 atagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttata 279  Q
    ||||||||||  |||| || |||| |||||||||||||| ||||  ||||||||   ||||||  |||||||||||||||| ||||    
T  37818375 atagcataagcacttaccaaataagtgcttatgtataagttatttctataacaagagataaaacgaagtcaaactattttcgtata 37818460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 294
Target Start/End: Original strand, 38578469 - 38578538
Alignment:
Q  225 tgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgttt 294  Q
    |||||||||||||  |||||||||  |||| || |||| ||| ||||||  |||||||||||||||||||    
T  38578469 tgtataagctatttctataacaaaagataacataaagttaaattatttttgtataagctataagttgttt 38578538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 38651595 - 38651514
Alignment:
Q  167 ttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaa 248  Q
    ||||||||||||   ||| | |||||||||| ||| ||| ||||||| ||| ||||||||||||||||| |  |||||||||    
T  38651595 ttggataaacagactaattatgcatttatagaatacgtgtttatcatgtaagtgcttatgtataagctaattctataacaaa 38651514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 45999427 - 45999354
Alignment:
Q  214 ataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    |||| |||| ||||||||||||||  |||||||||  |||| || ||||||||||  |||| ||||||||||||    
T  45999427 ataagtgctcatgtataagctatttctataacaaaagataagataaagtcaaactgctttcatataagctataa 45999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 47885169 - 47885124
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctatt 237  Q
    |||||||||||| ||||||||||||| |||||||| ||||| ||||    
T  47885169 ttatagcataagcgcttatcatataattgcttatgaataagttatt 47885124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 48830207 - 48830142
Alignment:
Q  222 ttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    ||||||||||| ||||  ||| || ||  ||||||| |||||||||||||||| ||||||||||||    
T  48830207 ttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataa 48830142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 49282866 - 49282825
Alignment:
Q  191 tttatagcataagtgcttatcatataaatgcttatgtataag 232  Q
    ||||||||||||||||||||| ||||| || |||||||||||    
T  49282866 tttatagcataagtgcttatcgtataagtgtttatgtataag 49282825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 286
Target Start/End: Original strand, 50998462 - 50998555
Alignment:
Q  193 tatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctata 286  Q
    ||||| ||||| | ||||||||||   ||||||||||||||||||  | |||||||  ||||||  || |||||||| |||| |||||||||||    
T  50998462 tatagtataagcgtttatcatataggcgcttatgtataagctatttctgtaacaaaagataaaacaaaatcaaactactttcatataagctata 50998555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 295
Target Start/End: Complemental strand, 1255577 - 1255489
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||||||||||||| ||||||||  ||||  |||  || |||| |||||||| | ||||| || ||| |||||| ||||||    
T  1255577 ttatcatataaatgcttatgtagaagctatttctatagtaaaagatgaaatgaagtcaaattcttttcatacaagttataagctgtttt 1255489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 287
Target Start/End: Complemental strand, 4276826 - 4276702
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatg-cttatgtataagctattcatataacaaattataaaattaagt 262  Q
    ||||||||| || |||| ||| | ||| |||||||||||   |||||||||||||||  ||| |||||| |||||  |||||||||  |||| || ||||    
T  4276826 tgtttggatcaatagcttaattatgcacttatagcataatcacttatcatataaatgttttaagtataaactatttctataacaaaagataatataaagt 4276727  T
Q  263 caaactattttcttataagctataa 287  Q
    || ||| |||||  |||||||||||    
T  4276726 catactgttttcacataagctataa 4276702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 10581179 - 10581135
Alignment:
Q  251 ataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| |||||||||| ||||| | ||||||||||||||||||    
T  10581179 ataaaataaagtcaaacttttttcatttaagctataagttgtttt 10581135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 13037781 - 13037829
Alignment:
Q  200 taagtgcttatcatataaatgcttatgtataagctattcatataacaaa 248  Q
    ||||| ||| |||||||| |||||||||||||||||||  |||||||||    
T  13037781 taagttcttgtcatataagtgcttatgtataagctatttctataacaaa 13037829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 15942249 - 15942293
Alignment:
Q  200 taagtgcttatcat-ataaatgcttatgtataagctattcatata 243  Q
    |||||||||||||| |||| ||||||||||||||||||| |||||    
T  15942249 taagtgcttatcatgataagtgcttatgtataagctatttatata 15942293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 17631283 - 17631223
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgctta 224  Q
    |||||||||||| |||| ||| ||||| | |||  ||||||||||||||||||| ||||||    
T  17631283 tgtttggataaatagcttaattaagcactaatactataagtgcttatcatataagtgctta 17631223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 284
Target Start/End: Original strand, 28768005 - 28768097
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagcta 284  Q
    |||||| |||||  |||||||| ||||||||||| |||||  ||||   |||||| |  ||||||| || ||||||||||||| |||||||||    
T  28768005 ttatagtataagcacttatcatgtaaatgcttatatataaattattttgataacagaagataaaataaaatcaaactattttcgtataagcta 28768097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 30371104 - 30371160
Alignment:
Q  239 atataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||||||  ||||||| || ||||| | ||||| ||||||||||||||||||||    
T  30371104 atataacaaaagataaaataaactcaaattgttttcatataagctataagttgtttt 30371160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 32958620 - 32958656
Alignment:
Q  251 ataaaattaagtcaaactattttcttataagctataa 287  Q
    ||||||||||||||||||||||||  |||||||||||    
T  32958620 ataaaattaagtcaaactattttcagataagctataa 32958656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 43029589 - 43029486
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc 263  Q
    ||||||||||||||  | ||| ||||| || ||||||||||| |||| |||| | ||||||||||||| |||||  || ||||||  ||||||| || ||    
T  43029589 tgtttggataaacaatttaattaagcacttttagcataagtgattat-atatgagtgcttatgtataacctatttctacaacaaaagataaaataaattc 43029491  T
Q  264 aaact 268  Q
    |||||    
T  43029490 aaact 43029486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 44032145 - 44032065
Alignment:
Q  207 ttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataa 287  Q
    ||||||||||| || ||||||||||||  ||  |||||||||   |||||| |||||||| | ||||| ||||||||||||    
T  44032145 ttatcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataa 44032065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 45205036 - 45205080
Alignment:
Q  251 ataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    ||||||| |||||||||||||| | ||||||||| ||||||||||    
T  45205036 ataaaataaagtcaaactatttccatataagctagaagttgtttt 45205080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 9936 - 9833
Alignment:
Q  192 ttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttg 291  Q
    |||||| |||| |||||||||||||  |||||||||||||| ||||  |||||||||  ||||||||||||||||   ||||| |||||| |||| ||||    
T  9936 ttatagaataaatgcttatcatataggtgcttatgtataagttatttctataacaaaaaataaaattaagtcaaaaagttttcatataagttataggttg 9837  T
Q  292 tttt 295  Q
    ||||    
T  9836 tttt 9833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 288
Target Start/End: Complemental strand, 6688 - 6563
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||||||| || ||| || | | |||||||| ||||||| |||||||||| |||||| ||| ||| ||  |||| || |  ||||||| |||    
T  6688 cctgtttggataaacaacttaattaaacgtctatagcattagtgcttctcatataaatacttatgcata-gctgtttctatagcataaaataaaataaag 6590  T
Q  262 tcaaactattttcttataagctataag 288  Q
    ||||||||||||| |||||||||||||    
T  6589 tcaaactattttcatataagctataag 6563  T

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Target: scaffold0153; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 288
Target Start/End: Complemental strand, 13708 - 13583
Alignment:
Q  162 cctgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaag 261  Q
    |||||||||||||||| || ||| || | | |||||||| ||||||| |||||||||| |||||| ||| ||| ||  |||| || |  ||||||| |||    
T  13708 cctgtttggataaacaacttaattaaacgtctatagcattagtgcttctcatataaatacttatgcata-gctgtttctatagcataaaataaaataaag 13610  T
Q  262 tcaaactattttcttataagctataag 288  Q
    ||||||||||||| |||||||||||||    
T  13609 tcaaactattttcatataagctataag 13583  T

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Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 294
Target Start/End: Complemental strand, 69131 - 69002
Alignment:
Q  164 tgtttggataaacagctaaatcaagcatttatagcataagtgcttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtc 263  Q
    |||||||||||||| ||  || ||||| ||| |||||||| ||||||| ||||  ||| ||||||||| | |||  |||| |||| |||||||| |||||    
T  69131 tgtttggataaacaacttcattaagcacttaaagcataagcgcttatcctatatgtgc-tatgtataaacaatttctataccaaaatataaaataaagtc 69033  T
Q  264 aaactattttcttataagctataagttgttt 294  Q
    ||| ||||||| ||||||| ||||| |||||    
T  69032 aaattattttcatataagcaataagctgttt 69002  T

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Target: scaffold0654 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 6784 - 6695
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||| ||||||||||||| |||||  |||||||||  ||||| |||||||||| | ||||| || | | || ||||||||||    
T  6784 cttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaattgttttcatagaggttaaaagttgtttt 6695  T

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Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 116703 - 116614
Alignment:
Q  206 cttatcatataaatgcttatgtataagctattcatataacaaattataaaattaagtcaaactattttcttataagctataagttgtttt 295  Q
    |||||||||||| ||||||||||||| |||||  |||||||||  ||||| |||||||||| | ||||| || | | || ||||||||||    
T  116703 cttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaattgttttcatagaggttaaaagttgtttt 116614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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