View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5682-Insertion-1 (Length: 313)
Name: NF5682-Insertion-1
Description: NF5682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5682-Insertion-1 |
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Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 7 - 211
Target Start/End: Original strand, 43016111 - 43016315
Alignment:
| Q |
7 |
agctagctaaccaacgttggtttacccacctagctaagaaaagaaaatgtaacattataaatagataaatatagttttgatgatgattgatacaaccatt |
106 |
Q |
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| T |
43016111 |
agctagctaaccaacgttggtttacccacctagctaagaaaagaaaatgtaacattataaataaataaatatagttttgatgatgattgatacaaccatt |
43016210 |
T |
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| Q |
107 |
atatatattgtaggttggaataggagaaggttctacaacaagagaaatgcaagcatcaggaggctcatgtgatcaggaagtgcatgaaagacagcatcgt |
206 |
Q |
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| T |
43016211 |
atatatattgtaggttggaataggagaaggttctacaacaagagaaatgcaagcatcaggaggctcatgtgatcaggaagtgcatgaaagacagcatcat |
43016310 |
T |
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| Q |
207 |
gtatt |
211 |
Q |
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| T |
43016311 |
gtatt |
43016315 |
T |
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