View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5682_low_27 (Length: 211)
Name: NF5682_low_27
Description: NF5682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5682_low_27 |
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Alignment Details
Target: chr8 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 180
Target Start/End: Complemental strand, 2373058 - 2372889
Alignment:
| Q |
11 |
tccaagaatatcccccttaagtgtgatttttcaccttctaataccgctttttagggagtccatgggcacaggagaaacaatgatccatgaccagaagagt |
110 |
Q |
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| T |
2373058 |
tccaaaaatatatcccttaagtgtgatttttcaccttctaataccgctttttagggagtccatgggcacaggagaaacaatgatccatgaccagaagagt |
2372959 |
T |
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| Q |
111 |
gggagatccaacatctccactaaaaacgttaaagaattatgtatatgagtcacatattttatatatccaa |
180 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
2372958 |
gggagatccaacatctccactaaaaacgttaaagaattatgtatatgagtcacatatcttatatatccaa |
2372889 |
T |
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