View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5682_low_6 (Length: 405)

Name: NF5682_low_6
Description: NF5682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5682_low_6
NF5682_low_6
[»] chr6 (4 HSPs)
chr6 (1-405)||(26840382-26840786)
chr6 (34-404)||(26839989-26840352)
chr6 (34-101)||(31665630-31665699)
chr6 (34-101)||(31442517-31442585)
[»] chr2 (5 HSPs)
chr2 (32-230)||(21922332-21922528)
chr2 (34-155)||(6667463-6667584)
chr2 (34-101)||(28926075-28926143)
chr2 (50-155)||(14456257-14456362)
chr2 (34-101)||(32281486-32281554)
[»] chr3 (3 HSPs)
chr3 (34-155)||(15291461-15291582)
chr3 (32-95)||(1529163-1529227)
chr3 (34-80)||(49235501-49235547)
[»] chr7 (3 HSPs)
chr7 (34-155)||(48850726-48850847)
chr7 (34-103)||(11072181-11072251)
chr7 (34-127)||(39742270-39742364)
[»] chr5 (2 HSPs)
chr5 (35-163)||(22780000-22780128)
chr5 (34-80)||(37337323-37337369)
[»] scaffold0521 (1 HSPs)
scaffold0521 (219-256)||(5201-5238)
[»] chr8 (3 HSPs)
chr8 (219-256)||(18291056-18291093)
chr8 (34-101)||(42315342-42315411)
chr8 (32-80)||(23828341-23828389)
[»] chr4 (4 HSPs)
chr4 (34-101)||(12094857-12094925)
chr4 (34-89)||(6898767-6898822)
chr4 (34-89)||(24257703-24257758)
chr4 (51-101)||(7810064-7810114)
[»] chr1 (2 HSPs)
chr1 (34-101)||(15700721-15700789)
chr1 (34-103)||(52164612-52164683)


Alignment Details
Target: chr6 (Bit Score: 381; Significance: 0; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 1 - 405
Target Start/End: Original strand, 26840382 - 26840786
Alignment:
Q  1 agatccgacaactaacgacccatagatttcgacatctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaacctactttttccctc 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26840382 agatccgacaactaacgacccatagatttcaacatctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaacctactttttccctc 26840481  T
Q  101 ccaaatcttaacattaactccttctaagtgtaattcctaatcaacattccactttctaattcaattccctattcccaaagttgttcaagagttgtattgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26840482 ccaaatcttaacattaactccttctaagtgtaattcctaatcaacattccactttctaattcaattccctattcccaaagttgttcaagagttgtattgt 26840581  T
Q  201 aaatgaaacatgtgattaccgatgcatatccctattctcaattcattctccaattcgaacacactgataccacttcatcatcagtttccttttcatttac 300  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  26840582 atatgaaacatgtgattaccgatgcatatccctattctcaattcattctccaattcgaacacactgataccactttatcatcagtttccttttcatttcc 26840681  T
Q  301 tccctcctctcatcgaccgaacatgactcgccggcgacaacacctacatctcctctctcctctatcaccaccaaatacaattccgtcttcgacccaattt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  26840682 tccctcctctcatcgaccgaacatgactcgccggcgacaacacctacatctcctctctcctctgtcaccaccaaatacaactccgtcttcgacccaattt 26840781  T
Q  401 caccg 405  Q
    |||||    
T  26840782 caccg 26840786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 34 - 404
Target Start/End: Original strand, 26839989 - 26840352
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaacctactttttccctcccaaatcttaacattaactccttctaagtgtaa 133  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26839989 atctttctttctaaagtttgtttgatcaagccatcattaaccctaatcttaacctactttttccctcccaaatcttaacattaactccttctaagtgtaa 26840088  T
Q  134 ttcctaatcaacattccactttctaattcaattccctattcccaaagttgttcaagagttgtattgtaaatgaaacatgtgattaccgatgcatatccct 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||    
T  26840089 ttcctaatcaacattccactttctaattcaattccctattcccaaagttgttcaaaagttgtat-------gaaacatgtgattaccgatgcatatccct 26840181  T
Q  234 attctcaattcattctccaattcgaacacactgataccacttcatcatcagtttccttttcatttactccctcctctcatcgaccgaacatgactcgccg 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26840182 attctcaattcattctccaattcgaacacactgataccacttcatcatcagtttccttttcatttcctccctcctctcatcgaccgaacatgactcgccg 26840281  T
Q  334 gcgacaacacctacatctcctctctcctctatcaccaccaaatacaattccgtcttcgacccaatttcacc 404  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||    
T  26840282 gcgacaacacctacatctcctctttcctctgtcaccaccaaatacaactccgtcttcgacccaatttcacc 26840352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 31665699 - 31665630
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaa-tcttaacctact-ttttccctcc 101  Q
    ||||||||| ||||||||||||||||||||| || | ||||||||| |||||||||| | ||||||||||    
T  31665699 atctttcttactaaagcttgtttggtcaagctattagtaaccctaattcttaacctaatattttccctcc 31665630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 31442517 - 31442585
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaacctact-ttttccctcc 101  Q
    ||||||||| ||||||||||||||||||||| ||||   |||||||| |||||||| | ||||||||||    
T  31442517 atctttcttactaaagcttgtttggtcaagcaatcacataccctaattttaacctaatattttccctcc 31442585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 6e-53; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 32 - 230
Target Start/End: Original strand, 21922332 - 21922528
Alignment:
Q  32 acatctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaacctact-ttttccctcccaaatcttaacattaactccttctaagtg 130  Q
    |||| |||||||||||||||||| || |||||| || | | ||||||||||||||||| | ||||||||||  ||||||| ||||||||   ||||||||    
T  21922332 acatttttctttctaaagcttgtctgatcaagctataacttaccctaatcttaacctaatattttccctccttaatcttagcattaact---tctaagtg 21922428  T
Q  131 taattcctaatcaacattccactttctaattcaattccctattcccaaagttgttcaagagttgtattgtaaatgaaacatgtgattaccgatgcatatc 230  Q
     |||||||||||| |||||||||||  ||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21922429 caattcctaatcagcattccactttggaattcaaatccttgttcccaaagttgttcaagagttgtattgtaaatgaaacatgtgattaccgatgcatatc 21922528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 6667463 - 6667584
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaacctactttttccctcccaaatcttaacattaactccttctaagtgtaa 133  Q
    ||||||||||||||||||||||||||||||| ||  || ||||||||| ||||||| |||||||||||      ||| ||||||||| |||||| ||  |    
T  6667463 atctttctttctaaagcttgtttggtcaagctattgtttaccctaatcctaacctaatttttccctccattgcattagcattaactctttctaaatgcta 6667562  T
Q  134 ttcctaatcaacattccacttt 155  Q
     ||||||||| |||||||||||    
T  6667563 atcctaatcagcattccacttt 6667584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 28926075 - 28926143
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaa-tcttaacctactttttccctcc 101  Q
    ||||||||| ||||||||||| ||||||||| || | ||||||||| |||||||||| |||||||||||    
T  28926075 atctttcttactaaagcttgtctggtcaagctattagtaaccctaattcttaacctaatttttccctcc 28926143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 14456362 - 14456257
Alignment:
Q  50 cttgtttggtcaagccatcattaaccctaatcttaac-ctactttttccctcccaaatcttaacattaactccttctaagtgtaattcctaatcaacatt 148  Q
    ||||||||||||||| |||||| |||||||| | ||| ||| |||||||||||    |  || |||||| ||||||||||||  ||||||||||||||||    
T  14456362 cttgtttggtcaagctatcatttaccctaat-tcaactctaatttttccctccattgtgatagcattaaatccttctaagtggtattcctaatcaacatt 14456264  T
Q  149 ccacttt 155  Q
    |||||||    
T  14456263 ccacttt 14456257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 32281486 - 32281554
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaacctact-ttttccctcc 101  Q
    ||||||||| |||||| |||||||||||||| || | |||||||||| |||||||| | ||||||||||    
T  32281486 atctttcttactaaagtttgtttggtcaagctattagtaaccctaattttaacctagtattttccctcc 32281554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 15291461 - 15291582
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaacctactttttccctcccaaatcttaacattaactccttctaagtgtaa 133  Q
    ||||||||| ||||||||||||||||||||| ||  || ||||||||||||||||| |||||||||||    | ||| |||||||||||||||||||  |    
T  15291461 atctttcttactaaagcttgtttggtcaagctattgtttaccctaatcttaacctaatttttccctccattgtattagcattaactccttctaagtgcta 15291560  T
Q  134 ttcctaatcaacattccacttt 155  Q
     |||||||||||||||||||||    
T  15291561 atcctaatcaacattccacttt 15291582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 1529163 - 1529227
Alignment:
Q  32 acatctttctttctaaagcttgtttggtcaagccatcattaaccctaa-tcttaacctacttttt 95  Q
    ||||||||||| ||||||||||||||||||||| || | ||||||||| |||||||||| |||||    
T  1529163 acatctttcttactaaagcttgtttggtcaagctattagtaaccctaattcttaacctaattttt 1529227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 49235547 - 49235501
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaat 80  Q
    ||||||||| |||||| |||||||||||||| |||||| ||||||||    
T  49235547 atctttcttactaaagtttgtttggtcaagctatcatttaccctaat 49235501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 7e-22; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 48850726 - 48850847
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaacctactttttccctcccaaatcttaacattaactccttctaagtgtaa 133  Q
    ||||||||||||||||||||| || |||||| ||  || ||||||||||||||||| |||||||||||   || ||| |||||||||||||||||||  |    
T  48850726 atctttctttctaaagcttgtctgatcaagctattgtttaccctaatcttaacctaatttttccctccattatgttagcattaactccttctaagtgcta 48850825  T
Q  134 ttcctaatcaacattccacttt 155  Q
     ||||||||| |||| ||||||    
T  48850826 atcctaatcagcatttcacttt 48850847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 11072251 - 11072181
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaaccta-ctttttccctccca 103  Q
    |||||||||||||||||||||  |||||||| |||  |||||||||| |||||||| ||||||||||||||    
T  11072251 atctttctttctaaagcttgtccggtcaagcaatccctaaccctaattttaacctagctttttccctccca 11072181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 39742364 - 39742270
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaacctact-ttttccctcccaaatcttaacattaactccttctaa 127  Q
    ||||||||| |||||||||||||| |||||| ||   ||||||||||||||||||| | |||||||||    || ||| ||||||||||||||||    
T  39742364 atctttcttactaaagcttgtttgatcaagctattgataaccctaatcttaacctaatattttccctcgattatgttagcattaactccttctaa 39742270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 22780128 - 22780000
Alignment:
Q  35 tctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaacctactttttccctcccaaatcttaacattaactccttctaagtgtaat 134  Q
    |||||||||||||||||||| || |||||| ||  || ||||||||||||||||| |||||||||||    | ||| |||||||||||||||||||  |     
T  22780128 tctttctttctaaagcttgtctgatcaagctattgtttaccctaatcttaacctaatttttccctccattgtgttagcattaactccttctaagtgctaa 22780029  T
Q  135 tcctaatcaacattccactttctaattca 163  Q
    || |||||| |||| |||||| |||||||    
T  22780028 tcataatcagcatttcactttgtaattca 22780000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 37337323 - 37337369
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaat 80  Q
    ||||||||| ||||||||||||||||||||| || | ||||||||||    
T  37337323 atctttcttactaaagcttgtttggtcaagctataagtaaccctaat 37337369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 5238 - 5201
Alignment:
Q  219 ccgatgcatatccctattctcaattcattctccaattc 256  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  5238 ccgatacatatccctattctcaattcattctccaattc 5201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 18291093 - 18291056
Alignment:
Q  219 ccgatgcatatccctattctcaattcattctccaattc 256  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  18291093 ccgatacatatccctattctcaattcattctccaattc 18291056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 42315342 - 42315411
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaa-tcttaacctact-ttttccctcc 101  Q
    ||||||||| ||||||||||||||||||||| || | ||||||||| |||||||||| | ||||||||||    
T  42315342 atctttcttactaaagcttgtttggtcaagctattagtaaccctaattcttaacctaatattttccctcc 42315411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 23828341 - 23828389
Alignment:
Q  32 acatctttctttctaaagcttgtttggtcaagccatcattaaccctaat 80  Q
    ||||||||||| ||| ||||||||||||||||| || | ||||||||||    
T  23828341 acatctttcttactagagcttgtttggtcaagctattagtaaccctaat 23828389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 12094925 - 12094857
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaacctact-ttttccctcc 101  Q
    ||||||||| ||||||||||||||||||||| || |  ||||||||| |||||||| | ||||||||||    
T  12094925 atctttcttactaaagcttgtttggtcaagctattagaaaccctaattttaacctaatattttccctcc 12094857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 6898822 - 6898767
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaaccta 89  Q
    ||||||||| |||||||||||||| |||||| ||   |||||||||||||||||||    
T  6898822 atctttcttactaaagcttgtttgatcaagctattggtaaccctaatcttaaccta 6898767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 24257703 - 24257758
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaaccta 89  Q
    ||||||||| ||||||||||||||||||||| ||  || |||||||| ||||||||    
T  24257703 atctttcttactaaagcttgtttggtcaagcaattgttcaccctaattttaaccta 24257758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 7810064 - 7810114
Alignment:
Q  51 ttgtttggtcaagccatcattaaccctaatcttaacctactttttccctcc 101  Q
    |||||||||||||| ||  || ||||||||||||||||| |||||||||||    
T  7810064 ttgtttggtcaagctattgtttaccctaatcttaacctaatttttccctcc 7810114  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 15700721 - 15700789
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaacctact-ttttccctcc 101  Q
    ||||||||| |||||| |||||||||||||| || | |||||||||| |||||||| | ||||||||||    
T  15700721 atctttcttactaaagtttgtttggtcaagctattagtaaccctaattttaacctagtattttccctcc 15700789  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 52164612 - 52164683
Alignment:
Q  34 atctttctttctaaagcttgtttggtcaagccatcattaaccctaa-tcttaaccta-ctttttccctccca 103  Q
    ||||||||||||||||||||| ||||||||| |||  |||||| || || ||||||| ||||||||||||||    
T  52164612 atctttctttctaaagcttgtctggtcaagcaatccctaaccccaattcataacctagctttttccctccca 52164683  T

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