View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5682_low_8 (Length: 395)

Name: NF5682_low_8
Description: NF5682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5682_low_8
NF5682_low_8
[»] chr3 (25 HSPs)
chr3 (16-227)||(36463094-36463315)
chr3 (274-384)||(36462934-36463047)
chr3 (16-192)||(36661709-36661893)
chr3 (293-373)||(24569099-24569179)
chr3 (274-373)||(8679053-8679155)
chr3 (293-373)||(37311986-37312066)
chr3 (293-373)||(43253862-43253942)
chr3 (293-364)||(34750532-34750603)
chr3 (293-374)||(30190658-30190739)
chr3 (293-374)||(36476620-36476701)
chr3 (293-374)||(52290929-52291010)
chr3 (293-373)||(11905858-11905938)
chr3 (293-373)||(23004381-23004461)
chr3 (287-370)||(12736574-12736657)
chr3 (293-370)||(30682068-30682145)
chr3 (295-372)||(51837959-51838036)
chr3 (293-365)||(11632117-11632189)
chr3 (293-373)||(19823047-19823127)
chr3 (274-373)||(29023965-29024066)
chr3 (293-373)||(37695665-37695745)
chr3 (294-373)||(37772963-37773042)
chr3 (293-370)||(3901151-3901228)
chr3 (296-349)||(44301601-44301654)
chr3 (293-374)||(54726521-54726602)
chr3 (293-349)||(30711109-30711165)
[»] chr1 (32 HSPs)
chr1 (293-370)||(6160464-6160541)
chr1 (276-349)||(7351652-7351728)
chr1 (293-370)||(35538679-35538756)
chr1 (293-373)||(39864147-39864227)
chr1 (296-373)||(28749030-28749107)
chr1 (293-374)||(40144848-40144929)
chr1 (293-374)||(49223987-49224068)
chr1 (293-373)||(23168995-23169075)
chr1 (293-373)||(26093430-26093510)
chr1 (297-373)||(32970569-32970645)
chr1 (331-374)||(3158016-3158059)
chr1 (293-364)||(44707771-44707842)
chr1 (293-375)||(20209840-20209922)
chr1 (293-370)||(8896337-8896414)
chr1 (313-374)||(15444482-15444543)
chr1 (293-373)||(9307663-9307743)
chr1 (293-373)||(16395049-16395128)
chr1 (293-373)||(30754943-30755023)
chr1 (293-364)||(41121836-41121907)
chr1 (293-374)||(15699158-15699240)
chr1 (295-373)||(31042835-31042913)
chr1 (293-370)||(31154164-31154241)
chr1 (293-370)||(36701957-36702034)
chr1 (293-370)||(36718061-36718138)
chr1 (293-374)||(42410030-42410111)
chr1 (293-374)||(45331377-45331458)
chr1 (293-349)||(917060-917116)
chr1 (293-373)||(4441605-4441685)
chr1 (293-373)||(12039118-12039198)
chr1 (293-373)||(24991655-24991735)
chr1 (285-373)||(34031529-34031617)
chr1 (293-373)||(37276497-37276577)
[»] chr5 (20 HSPs)
chr5 (293-373)||(40530221-40530301)
chr5 (293-373)||(6315774-6315854)
chr5 (287-368)||(11796169-11796250)
chr5 (293-374)||(29374378-29374459)
chr5 (293-373)||(6753656-6753735)
chr5 (293-373)||(7827923-7828003)
chr5 (293-373)||(27542831-27542911)
chr5 (293-374)||(21060666-21060747)
chr5 (293-374)||(40899954-40900035)
chr5 (293-349)||(4441057-4441113)
chr5 (293-373)||(4818587-4818667)
chr5 (293-373)||(29570428-29570508)
chr5 (293-349)||(41062181-41062237)
chr5 (293-364)||(27580636-27580707)
chr5 (295-373)||(9515784-9515862)
chr5 (293-374)||(1248600-1248681)
chr5 (293-373)||(5731812-5731892)
chr5 (293-373)||(8698345-8698425)
chr5 (293-373)||(31655089-31655169)
chr5 (296-364)||(32440180-32440248)
[»] chr8 (23 HSPs)
chr8 (293-371)||(31082655-31082733)
chr8 (274-370)||(31331422-31331521)
chr8 (293-374)||(32476323-32476404)
chr8 (293-373)||(1875592-1875672)
chr8 (293-373)||(9300113-9300193)
chr8 (293-373)||(17719258-17719338)
chr8 (293-374)||(10097990-10098071)
chr8 (293-373)||(10179947-10180027)
chr8 (293-373)||(21216101-21216181)
chr8 (293-373)||(31271057-31271137)
chr8 (293-373)||(39482651-39482731)
chr8 (293-364)||(44761503-44761574)
chr8 (293-379)||(396605-396691)
chr8 (293-370)||(4428354-4428431)
chr8 (293-346)||(4924094-4924147)
chr8 (293-373)||(7172950-7173030)
chr8 (293-373)||(26626112-26626192)
chr8 (293-349)||(36006911-36006967)
chr8 (293-373)||(42972508-42972588)
chr8 (293-373)||(45425666-45425746)
chr8 (293-374)||(34393953-34394034)
chr8 (293-349)||(11976960-11977016)
chr8 (331-367)||(41687400-41687436)
[»] chr7 (29 HSPs)
chr7 (293-374)||(7463256-7463337)
chr7 (293-373)||(24516295-24516375)
chr7 (293-373)||(34100553-34100633)
chr7 (293-374)||(42935704-42935785)
chr7 (293-373)||(28103776-28103856)
chr7 (274-373)||(38391769-38391871)
chr7 (293-373)||(41506071-41506151)
chr7 (287-373)||(2850887-2850973)
chr7 (293-374)||(27921031-27921112)
chr7 (293-373)||(83428-83508)
chr7 (293-373)||(759097-759177)
chr7 (293-373)||(3178210-3178290)
chr7 (293-373)||(8592446-8592526)
chr7 (293-373)||(11373434-11373514)
chr7 (293-373)||(12631348-12631428)
chr7 (293-373)||(13962002-13962082)
chr7 (293-373)||(21759990-21760070)
chr7 (293-373)||(46478299-46478379)
chr7 (293-374)||(28202314-28202395)
chr7 (289-373)||(33819253-33819337)
chr7 (296-349)||(39452390-39452443)
chr7 (293-373)||(16560576-16560656)
chr7 (293-373)||(16605006-16605086)
chr7 (293-373)||(19271739-19271819)
chr7 (293-349)||(21350655-21350711)
chr7 (293-373)||(22738744-22738824)
chr7 (293-373)||(29835420-29835500)
chr7 (293-373)||(34947543-34947623)
chr7 (313-373)||(44180268-44180328)
[»] chr4 (39 HSPs)
chr4 (293-370)||(49175942-49176019)
chr4 (293-373)||(35380338-35380418)
chr4 (293-372)||(5841433-5841512)
chr4 (296-370)||(461997-462071)
chr4 (293-374)||(17114476-17114557)
chr4 (293-373)||(6643665-6643745)
chr4 (293-373)||(11907604-11907684)
chr4 (293-373)||(17237301-17237381)
chr4 (293-373)||(28500896-28500976)
chr4 (293-373)||(34360691-34360771)
chr4 (293-373)||(40122859-40122939)
chr4 (293-373)||(44536201-44536281)
chr4 (293-373)||(47464370-47464450)
chr4 (274-373)||(49428347-49428449)
chr4 (293-373)||(52247433-52247513)
chr4 (293-373)||(52859804-52859884)
chr4 (296-365)||(3098757-3098826)
chr4 (293-374)||(19265844-19265925)
chr4 (293-374)||(47773023-47773104)
chr4 (293-373)||(2942650-2942729)
chr4 (293-373)||(7061669-7061749)
chr4 (293-373)||(11288635-11288714)
chr4 (293-373)||(32884837-32884917)
chr4 (293-373)||(33790736-33790816)
chr4 (293-373)||(38405107-38405187)
chr4 (293-373)||(42517643-42517723)
chr4 (293-349)||(49746997-49747053)
chr4 (293-364)||(36985822-36985893)
chr4 (293-363)||(16821346-16821416)
chr4 (331-373)||(17121316-17121358)
chr4 (293-371)||(46396890-46396968)
chr4 (293-374)||(3689598-3689679)
chr4 (289-370)||(53412140-53412221)
chr4 (293-373)||(2066825-2066905)
chr4 (293-373)||(21240709-21240789)
chr4 (274-349)||(26147644-26147722)
chr4 (293-373)||(43237279-43237359)
chr4 (313-373)||(51625139-51625199)
chr4 (293-373)||(53346795-53346875)
[»] scaffold0302 (1 HSPs)
scaffold0302 (293-373)||(16134-16214)
[»] chr6 (25 HSPs)
chr6 (293-373)||(3291766-3291846)
chr6 (293-370)||(1063604-1063681)
chr6 (293-374)||(11655943-11656024)
chr6 (293-373)||(29363342-29363422)
chr6 (293-373)||(31894208-31894288)
chr6 (297-349)||(34300035-34300087)
chr6 (293-371)||(1955979-1956057)
chr6 (295-373)||(23142705-23142783)
chr6 (296-374)||(32440642-32440720)
chr6 (293-370)||(1781838-1781915)
chr6 (293-373)||(3720239-3720319)
chr6 (274-373)||(13087544-13087646)
chr6 (293-373)||(13909460-13909540)
chr6 (293-373)||(15058153-15058233)
chr6 (313-373)||(21018815-21018875)
chr6 (331-373)||(12438782-12438824)
chr6 (293-374)||(5302387-5302468)
chr6 (293-374)||(6801967-6802048)
chr6 (296-373)||(27448154-27448231)
chr6 (293-374)||(30716936-30717017)
chr6 (293-373)||(181592-181671)
chr6 (333-373)||(12340035-12340075)
chr6 (274-365)||(17835398-17835492)
chr6 (293-373)||(21010213-21010293)
chr6 (293-373)||(26592358-26592438)
[»] chr2 (21 HSPs)
chr2 (293-373)||(8947049-8947129)
chr2 (293-373)||(35313923-35314003)
chr2 (293-374)||(15359083-15359164)
chr2 (293-374)||(16463725-16463806)
chr2 (293-373)||(16805917-16805997)
chr2 (293-373)||(16845198-16845278)
chr2 (293-373)||(34225626-34225706)
chr2 (293-373)||(39691526-39691606)
chr2 (293-373)||(45235617-45235697)
chr2 (293-374)||(14523368-14523449)
chr2 (293-370)||(27866528-27866604)
chr2 (293-373)||(34120436-34120514)
chr2 (293-366)||(37322464-37322537)
chr2 (293-373)||(5789645-5789725)
chr2 (293-373)||(43115799-43115879)
chr2 (293-373)||(43410462-43410542)
chr2 (299-374)||(34437997-34438072)
chr2 (293-352)||(39329682-39329741)
chr2 (293-374)||(33729913-33729993)
chr2 (293-349)||(1206724-1206780)
chr2 (293-373)||(16377653-16377733)
[»] scaffold0294 (1 HSPs)
scaffold0294 (293-373)||(17071-17151)
[»] scaffold0159 (1 HSPs)
scaffold0159 (293-373)||(34018-34098)
[»] scaffold0328 (1 HSPs)
scaffold0328 (274-374)||(7979-8082)
[»] scaffold0003 (1 HSPs)
scaffold0003 (296-373)||(39127-39204)
[»] scaffold0583 (1 HSPs)
scaffold0583 (293-373)||(2061-2141)
[»] scaffold0330 (1 HSPs)
scaffold0330 (293-373)||(5426-5506)
[»] scaffold0110 (1 HSPs)
scaffold0110 (294-374)||(1741-1821)
[»] scaffold0018 (1 HSPs)
scaffold0018 (293-373)||(136036-136116)
[»] scaffold0012 (1 HSPs)
scaffold0012 (293-373)||(105720-105800)


Alignment Details
Target: chr3 (Bit Score: 169; Significance: 2e-90; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 36463315 - 36463094
Alignment:
Q  16 agaacaacatagctaagaattgagttgtgaggatataggttgagttttagagcaacatggcaggtgtgtatatatatgtgcaggaaatgaaatgatcctt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  36463315 agaacaacatagctaagaattgagttgtgaggatataggttgagttttagagcaatatagcaggtgtgtatatatatgtgcaggaaatgaaatgatcctt 36463216  T
Q  116 acgaaatgctgagcaaagtgcaaacacat-----ataaagttagt-ggtggaccttgctttcgt----catacctattgaaataaattaatactccatta 205  Q
    |||||||||||||||||||||||||||||     ||||||||||| ||||||||||||||||||    ||||||||||||||||||||||||||||||||    
T  36463215 acgaaatgctgagcaaagtgcaaacacatgaataataaagttagtgggtggaccttgctttcgtcatacatacctattgaaataaattaatactccatta 36463116  T
Q  206 tttgactttgacttaacgatac 227  Q
    ||||||||||||||||||||||    
T  36463115 tttgactttgacttaacgatac 36463094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 274 - 384
Target Start/End: Complemental strand, 36463047 - 36462934
Alignment:
Q  274 catccaacttaattac---acaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    ||||||||||||||||   |||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||    
T  36463047 catccaacttaattactccacaaacaacaattaataaggttattttagtaaatgctaccaattttaacattaaaatcaatactatcaatcatttttttaa 36462948  T
Q  371 taacgactaatatt 384  Q
    ||||||||||||||    
T  36462947 taacgactaatatt 36462934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 36661893 - 36661709
Alignment:
Q  16 agaacaacatagctaagaattgagttgtgaggatataggttgagttttagagcaacatg-gcaggtgtgtatatatatgtgcaggaaatgaaatgatcct 114  Q
    ||||||| ||||||| |||||||| ||  |||||||||| ||||||| ||||||| ||| |||||||||||||||||  |||||||||| ||||||||||    
T  36661893 agaacaatatagctaggaattgagatgcaaggatataggctgagtttgagagcaatatgtgcaggtgtgtatatata--tgcaggaaattaaatgatcct 36661796  T
Q  115 tacgaa---atgctgagcaaagtgcaaacacat-----ataaagttagt-ggtggaccttgctttcgtcatacctattgaaataaat 192  Q
     | |||   ||  ||  ||||||||||||||||     ||| ||| ||| |||| |||||||||||||||||||||||| |||||||    
T  36661795 caagaagatattatgttcaaagtgcaaacacatgaataatatagtgagtgggtgaaccttgctttcgtcatacctattgtaataaat 36661709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 24569179 - 24569099
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| |||||||||||||| ||  ||||||| |||| ||||||| || || |||||||||||||||||    
T  24569179 aactacaattaataagggtattttagtaaataatattaattttaccattgaaatcaacacaattaatcattttcttaataa 24569099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 274 - 373
Target Start/End: Complemental strand, 8679155 - 8679053
Alignment:
Q  274 catccaacttaatta---cacaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    |||||||||||||||   ||| ||||| ||||||||||| | ||||||||||| |||| ||||||| |||| ||||||| || || |||||||| |||||    
T  8679155 catccaacttaattaattcactaactataattaataaggatcttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaa 8679056  T
Q  371 taa 373  Q
    |||    
T  8679055 taa 8679053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 37311986 - 37312066
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | ||||||||||| |||| ||||||| |||| ||||||| || || |||||||| ||||||||    
T  37311986 aactacaattaataagggttttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataa 37312066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 43253942 - 43253862
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | ||||||||||| |||| ||||||| |||| ||||||| || || |||||||| ||||||||    
T  43253942 aactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataa 43253862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 34750532 - 34750603
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattt 364  Q
    ||||||||||||||||| | |||||||||||  ||| ||||||| |||||||||||| || |||||||||||    
T  34750532 aactacaattaataaggatgttttagtaaatgatactaattttaccattaaaatcaacacaatcaatcattt 34750603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 30190739 - 30190658
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| |||||||||||||  ||| ||||||| |||| ||||||| || || |||||||| ||| |||||    
T  30190739 aactacaattaataagggtattttagtaaatgatactaattttaccattgaaatcaacacaattaatcatttccttcataac 30190658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 36476620 - 36476701
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| |||||||||||||  ||  ||||||| ||||  |||||| || |||||| ||||||||||||||    
T  36476620 aactacaattaataagggtattttagtaaatgatattaattttaccattgcaatcaacacaatcaattattttcttaataac 36476701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 52290929 - 52291010
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||| ||||||||||| | ||||| |||||  ||| ||||||| ||| ||||||||||| || ||||||||||||||||||    
T  52290929 aactataattaataaggctgttttaataaatggtactaattttaccatcaaaatcaatacaattaatcattttcttaataac 52291010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 11905858 - 11905938
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| |  ||||||||||  ||| ||||||||||| ||||| || || || |||||||||||||||||    
T  11905858 aactacaattaataagggtgctttagtaaatgatactaattttatcatcaaaattaacacaattaatcattttcttaataa 11905938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 23004461 - 23004381
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||||||| ||||||| ||||||| |||| ||||| | || || |||||||| ||||||||    
T  23004461 aactacaattaataagggtgttttagtatatactactaattttaccattgaaatcgacacaattaatcatttccttaataa 23004381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 370
Target Start/End: Complemental strand, 12736657 - 12736574
Alignment:
Q  287 tacacaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    ||||| || |||||||||||||| |||| ||||||||  ||| ||||||||||||| |||||| || || |||||||| |||||    
T  12736657 tacactaagtacaattaataagggtattgtagtaaatgatactaattttatcattagaatcaacacaattaatcatttccttaa 12736574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 370
Target Start/End: Complemental strand, 30682145 - 30682068
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    |||||||||||||||| ||||||||||||||  |||  |||||| ||||||||| || || || |||||||| |||||    
T  30682145 aactacaattaataagattattttagtaaatgatactcattttaacattaaaattaaaacaattaatcatttccttaa 30682068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 51838036 - 51837959
Alignment:
Q  295 ctacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaata 372  Q
    |||||| |||||||| |||||||||||||  ||  |||||||||||| ||||||| || || |||||||| |||||||    
T  51838036 ctacaactaataagggtattttagtaaatgatattaattttatcattgaaatcaacacaattaatcatttacttaata 51837959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 11632117 - 11632189
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcatttt 365  Q
    ||||||||||||||| | | |||||||||||||||| ||||||| | || ||||||| || || |||||||||    
T  11632117 aactacaattaataaaggtgttttagtaaatactactaattttaccgttgaaatcaacacaattaatcatttt 11632189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 19823047 - 19823127
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||||||||||  ||| |||| || ||| |||||||| || || |||||||| ||||||||    
T  19823047 aactacaattaataagggtgttttagtaaatgatactaattctaccatcaaaatcaacacaattaatcatttccttaataa 19823127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 373
Target Start/End: Complemental strand, 29024066 - 29023965
Alignment:
Q  274 catccaacttaattac---acaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    ||||||||||||||||   || |||||||||||||||| |  |||||||||||  ||| ||||||| ||| |||||||| || || ||||||||| ||||    
T  29024066 catccaacttaattactccactaactacaattaataagatg-ttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttttttaa 29023968  T
Q  371 taa 373  Q
    |||    
T  29023967 taa 29023965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 37695745 - 37695665
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||||||||||  ||  ||||||| |||| ||||||| || || |||||||| ||||||||    
T  37695745 aactacaattaataagggtgttttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttccttaataa 37695665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 373
Target Start/End: Complemental strand, 37773042 - 37772963
Alignment:
Q  294 actacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||| ||||||||||| |||||||||||||  ||  ||||||| ||||  ||||||||| || |||||||| ||||||||    
T  37773042 actataattaataagggtattttagtaaatgatattaattttaccattgtaatcaatacaattaatcatttccttaataa 37772963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 370
Target Start/End: Complemental strand, 3901228 - 3901151
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    |||||||| |||||||  | |||||||||||  ||  |||||||||||| |||| ||||| || ||||||||||||||    
T  3901228 aactacaactaataagaatgttttagtaaatgatattaattttatcattgaaattaatacaattaatcattttcttaa 3901151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 44301601 - 44301654
Alignment:
Q  296 tacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaa 349  Q
    ||||||| |||||| |||||||||||||  ||| |||||||||||| |||||||    
T  44301601 tacaattgataagggtattttagtaaatgatactaattttatcattgaaatcaa 44301654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 54726521 - 54726602
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||| | | |||||||||||  ||  ||||||| ||| |||||||| ||  | ||||||||||||||||||    
T  54726521 aactacaattaataaagatgttttagtaaatgatattaattttaccatcaaaatcaacacatttaatcattttcttaataac 54726602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 30711109 - 30711165
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaa 349  Q
    ||||||||||||||| | | |||||||||||  ||  ||||||||||||||||||||    
T  30711109 aactacaattaataatggtgttttagtaaatgatattaattttatcattaaaatcaa 30711165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 370
Target Start/End: Complemental strand, 6160541 - 6160464
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    ||||||||||||||||  |||||||||||||| ||| |||||||||||| ||||||| || || ||||||||||||||    
T  6160541 aactacaattaataagagtattttagtaaataatactaattttatcattgaaatcaacacaattaatcattttcttaa 6160464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 349
Target Start/End: Original strand, 7351652 - 7351728
Alignment:
Q  276 tccaacttaatta---cacaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaa 349  Q
    |||||||||||||   ||| ||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  7351652 tccaacttaattattccactaactagaattaataaggttattttagtaaataatattaattttatcattaaaatcaa 7351728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 35538679 - 35538756
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    ||||||||||||||||| |||||||||||||| || | ||||||||||| ||||||| || || ||| ||||||||||    
T  35538679 aactacaattaataaggatattttagtaaataatatccattttatcattgaaatcaacacaattaataattttcttaa 35538756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 39864147 - 39864227
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||  ||||||||||||| |||| ||||||| |||| ||||||| || || |||||||| ||||||||    
T  39864147 aactacaattaataagagtattttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataa 39864227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 373
Target Start/End: Original strand, 28749030 - 28749107
Alignment:
Q  296 tacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||||| | ||||||||||| |||| ||||||| |||| ||||||| || || |||||||| ||||||||    
T  28749030 tacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataa 28749107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 40144929 - 40144848
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| | |||||||||||  ||  ||||||| ||| |||||||| || || ||||||||||||||||||    
T  40144929 aactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcattttcttaataac 40144848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 49224068 - 49223987
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| | |||||||||||  ||| ||||||| ||| |||||||| || || ||||||||||||| ||||    
T  49224068 aactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcattttcttagtaac 49223987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 23169075 - 23168995
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||||| | ||||||||||| |||| ||||||| |||| ||||||| || || ||| |||||||||||||    
T  23169075 aactataattaataaggatgttttagtaaatgctactaattttaccattgaaatcaacacaattaattattttcttaataa 23168995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 26093430 - 26093510
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| ||||||| |||||  ||  ||||||| |||| ||||||| || || |||||||||||||||||    
T  26093430 aactacaattaataaggatattttaataaatgatattaattttaccattgaaatcaacacaattaatcattttcttaataa 26093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 373
Target Start/End: Complemental strand, 32970645 - 32970569
Alignment:
Q  297 acaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||| |  |||||||||||||| ||  |||||||||||| ||||||| || || |||||||||||||||||    
T  32970645 acaattaatacgagtattttagtaaataatattaattttatcattgaaatcaacacaattaatcattttcttaataa 32970569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 374
Target Start/End: Complemental strand, 3158059 - 3158016
Alignment:
Q  331 attttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  3158059 attttatcattaaaatcaatattattaatcattttcttaataac 3158016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 44707842 - 44707771
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattt 364  Q
    |||||||||||||||   | |||||||||||||||| |||||||||||| |||||||||  || ||||||||    
T  44707842 aactacaattaataaatgtgttttagtaaatactactaattttatcattgaaatcaatataattaatcattt 44707771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 375
Target Start/End: Complemental strand, 20209922 - 20209840
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataacg 375  Q
    ||||||||||||||||| | |||||||||||  ||| |||||||  || |||||||| |  || |||||||||||||||||||    
T  20209922 aactacaattaataaggatgttttagtaaatgatactaattttactatcaaaatcaacataattaatcattttcttaataacg 20209840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 370
Target Start/End: Complemental strand, 8896414 - 8896337
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    |||||||||||||||   |||||||||||||  ||  ||||||| |||| ||||||| || |||||||||||||||||    
T  8896414 aactacaattaataaatatattttagtaaatgatattaattttaccattgaaatcaacacaatcaatcattttcttaa 8896337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 15444543 - 15444482
Alignment:
Q  313 ttttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    |||||||||||| |||  |||||| |||||||||||| ||||| |||||||| |||||||||    
T  15444543 ttttagtaaataatacatattttaccattaaaatcaacactattaatcatttccttaataac 15444482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 9307663 - 9307743
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||| |||| | ||||||||||| |||  |||||||||||| ||||||| ||  | |||||||| ||||||||    
T  9307663 aactacaattaacaagggtgttttagtaaatgctattaattttatcattgaaatcaacacagttaatcatttccttaataa 9307743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 16395128 - 16395049
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||| ||||| ||||||||||||  ||| |||||||  || |||||||| || || |||||||||||||||||    
T  16395128 aactacaattaaaaaggt-attttagtaaatgatactaattttactatcaaaatcaacacaattaatcattttcttaataa 16395049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 30755023 - 30754943
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||| | |||||||||||||| ||  ||||||| | |||||||||| || || |||||||| ||||||||    
T  30755023 aactataattaataatgatattttagtaaataatataaattttacccttaaaatcaacacaattaatcatttccttaataa 30754943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 41121907 - 41121836
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattt 364  Q
    ||||||||||||||||| |||||||||||||  | | ||||||| ||| |||||||| || || ||||||||    
T  41121907 aactacaattaataagggtattttagtaaattatgctaattttaccatcaaaatcaacacaattaatcattt 41121836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 15699158 - 15699240
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatca-ttttcttaataac 374  Q
    ||||||||||||||||| | |||||||||||  ||  ||||||| ||| |||||||| || || ||||| |||||||||||||    
T  15699158 aactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttttcttaataac 15699240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 31042835 - 31042913
Alignment:
Q  295 ctacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||| ||||  |||||||  ||| ||||||| |||| ||||||| || || |||||||| ||||||||    
T  31042835 ctacaattaataagggtattacagtaaatgatactaattttaccattgaaatcaacacaattaatcatttccttaataa 31042913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 31154164 - 31154241
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    |||||||||||||||    | ||||||| ||| ||| |||||||||||||||||||| || || ||||||||| ||||    
T  31154164 aactacaattaataaatgcaatttagtagataatactaattttatcattaaaatcaacacaattaatcattttattaa 31154241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 36701957 - 36702034
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    |||||||||||||||||  ||||||||||||  ||| ||||||| |||| ||||||| |  || |||||||| |||||    
T  36701957 aactacaattaataagggcattttagtaaatgatactaattttaccattgaaatcaacataattaatcatttccttaa 36702034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 36718061 - 36718138
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    |||||||||||||||||  ||||||||||||  ||| ||||||| |||| ||||||| |  || |||||||| |||||    
T  36718061 aactacaattaataagggcattttagtaaatgatactaattttaccattgaaatcaacataattaatcatttccttaa 36718138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 42410030 - 42410111
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| |  ||||||||||  ||  ||||||| ||| |||||||| || || ||||||||| ||||||||    
T  42410030 aactacaattaataagggtgctttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttttttaataac 42410111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 45331377 - 45331458
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| | |||||||||||  ||  ||||||| ||| |||||||| |  || ||| ||||||||||||||    
T  45331377 aactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacataattaattattttcttaataac 45331458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 917060 - 917116
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaa 349  Q
    ||||||||||||||||| |||||||||||||  ||  ||||||| |||| |||||||    
T  917060 aactacaattaataagggtattttagtaaatgatattaattttaccatttaaatcaa 917116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 4441685 - 4441605
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||| |||| | |||||||||| || |  ||||||| |||||||||||  || || ||| |||||||||||||    
T  4441685 aactacaattaacaagggtgttttagtaaagacgattaattttaccattaaaatcaccacaattaattattttcttaataa 4441605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 12039118 - 12039198
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||  | | |||||||||  ||| ||||||| |||| ||||||| || || |||||||| ||||||||    
T  12039118 aactacaattaataagagtgtattagtaaatgttactaattttaccattgaaatcaacacaattaatcatttccttaataa 12039198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 24991735 - 24991655
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||| | | || ||||||||||||  ||||||| | || ||||||| || || |||||||| ||||||||    
T  24991735 aactacaattaataaaggtgttgtagtaaatactattaattttaccgttgaaatcaacacaattaatcatttccttaataa 24991655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 373
Target Start/End: Complemental strand, 34031617 - 34031529
Alignment:
Q  285 attacacaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||| ||||||||||||||| | |||||||||||||  ||  ||||||| ||||  |||||| || |  |||||||| ||||||||    
T  34031617 attacactaactacaattaataacggtattttagtaaatgatattaattttaccattggaatcaacacaagtaatcatttccttaataa 34031529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 37276497 - 37276577
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | ||||||||||   ||| ||||||| ||| |||||||| ||  | |||||||| ||||||||    
T  37276497 aactacaattaataagggtgttttagtaaacgatactaattttaccatcaaaatcaacacagttaatcatttccttaataa 37276577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 40530301 - 40530221
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | ||||||||||| |||| ||||||| |||| ||||||| || || |||||||||||||||||    
T  40530301 aactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataa 40530221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 6315854 - 6315774
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| |||||||||||||  ||  |||||||||||| |||| || || ||||||||||| ||||||||    
T  6315854 aactacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacacaatcaatcatttccttaataa 6315774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 368
Target Start/End: Complemental strand, 11796250 - 11796169
Alignment:
Q  287 tacacaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttctt 368  Q
    ||||| |||||||||||||||   |||||||||||||| ||  |||||||||||||||||||| || || || |||||||||    
T  11796250 tacactaactacaattaataataatattttagtaaataatattaattttatcattaaaatcaacacaattaaccattttctt 11796169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 29374378 - 29374459
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||| | | ||||||||||| |||  |||||||||||| ||||||| |  || ||||||||||||||||||    
T  29374378 aactacaattaataaaggtcttttagtaaatgctattaattttatcattgaaatcaacataattaatcattttcttaataac 29374459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 6753735 - 6753656
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| |||||||||||||  ||| ||||||| |||| |||| ||||  || |||||||||||||||||    
T  6753735 aactacaattaataagggtattttagtaaatgatactaattttaccattgaaattaata-aattaatcattttcttaataa 6753656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 7828003 - 7827923
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| ||||||| |||||  ||| ||||||| |||| ||||||| || || ||| |||||||||||||    
T  7828003 aactacaattaataagggtattttaataaatgatactaattttaccattgaaatcaacacaattaattattttcttaataa 7827923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 27542831 - 27542911
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||  |||||||||||||  ||  ||||||| |||| ||||||| || ||||||||||| ||||||||    
T  27542831 aactacaattaataagagtattttagtaaatggtattaattttaccattgaaatcaacacaatcaatcatttccttaataa 27542911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 21060666 - 21060747
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||  |||||||||||||| ||| ||||||| ||| ||||| || || || |||||||| | |||||||    
T  21060666 aactacaattaataagagtattttagtaaataatactaattttaccatcaaaataaacacaattaatcatttccctaataac 21060747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 40899954 - 40900035
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| | |||||||||||  ||| ||||||  ||| |||||||| || || |||||||| |||||||||    
T  40899954 aactacaattaataagggtgttttagtaaatgatactaattttgccatcaaaatcaacacaattaatcatttccttaataac 40900035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 4441057 - 4441113
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaa 349  Q
    |||||||||||||||   |||||||||||||| ||  ||||||||||||||||||||    
T  4441057 aactacaattaataaaaatattttagtaaataatattaattttatcattaaaatcaa 4441113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 4818587 - 4818667
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | ||||||||||| |||| |||||||  ||| ||||||| || || ||| |||| ||||||||    
T  4818587 aactacaattaataagggtgttttagtaaatgctactaattttacaattgaaatcaacacaattaattatttccttaataa 4818667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 29570428 - 29570508
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||| | | |||||| ||||||||  ||||||| |||||||||||| || || ||||||||  |||||||    
T  29570428 aactacaattaataaaggtgttttagcaaatactaataattttaacattaaaatcaacacaattaatcatttctttaataa 29570508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 349
Target Start/End: Complemental strand, 41062237 - 41062181
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaa 349  Q
    ||||||||||||||||| | |||||||||||  ||| ||||||||||| ||||||||    
T  41062237 aactacaattaataagggtgttttagtaaatgatactaattttatcatcaaaatcaa 41062181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 27580636 - 27580707
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattt 364  Q
    ||||||||||||||||| |||||||||||||  ||  ||||||| |||| ||||||| || || ||||||||    
T  27580636 aactacaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaattaatcattt 27580707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 9515784 - 9515862
Alignment:
Q  295 ctacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||| |||||||||| | |||||||||||  ||| ||||||| |||| ||||||| || || ||||||| |||||||||    
T  9515784 ctactattaataaggatgttttagtaaatgatactaattttaccattgaaatcaacacaattaatcattatcttaataa 9515862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 1248681 - 1248600
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| |||||||||||||  ||  ||||||| |||| ||||||| |  || ||| |||| |||||||||    
T  1248681 aactacaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacataattaataatttccttaataac 1248600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 5731812 - 5731892
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||| |||||||||| | |||||||||||  |||  ||||| | |||||||| || || || |||||||||||||||||    
T  5731812 aactacgattaataaggatgttttagtaaatgatacacattttgttattaaaatgaacacaattaatcattttcttaataa 5731892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 8698345 - 8698425
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||| |||||| | || ||||||| |||| ||||||| || || ||||||||  |||||||    
T  8698345 aactacaattaataagggtgttttggtaaatgcaactaattttaccattgaaatcaacacaattaatcatttctttaataa 8698425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 31655089 - 31655169
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| |||| ||||||||  ||  ||||||| |||| ||||||| || || ||||||||  |||||||    
T  31655089 aactacaattaataaggatattatagtaaatgatattaattttaccattgaaatcaacacaattaatcatttctttaataa 31655169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 32440180 - 32440248
Alignment:
Q  296 tacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattt 364  Q
    |||||||||||||| |||||||||||||  ||  |||||||||||| |||| || || || ||||||||    
T  32440180 tacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacacaattaatcattt 32440248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 293 - 371
Target Start/End: Original strand, 31082655 - 31082733
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaat 371  Q
    ||||| ||||||||||| | ||||||||||||| || |||||||||||||||||||| || || |||||||| ||||||    
T  31082655 aactataattaataagggtgttttagtaaataccactaattttatcattaaaatcaagacaattaatcatttccttaat 31082733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 370
Target Start/End: Original strand, 31331422 - 31331521
Alignment:
Q  274 catccaacttaattac---acaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    ||||||||||||||||   || ||||||||||||||| | |||||||||||||| ||  |||||||| ||| |||||||||| || |||||||| |||||    
T  31331422 catccaacttaattacttcactaactacaattaataatgatattttagtaaataataataattttataattgaaatcaatacaattaatcatttccttaa 31331521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 32476323 - 32476404
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| ||||||| |||||  ||  |||||||||||| ||||||| |  |||||||||||||||||||||    
T  32476323 aactacaattaataagggtattttaataaatgatattaattttatcattgaaatcaacagaatcaatcattttcttaataac 32476404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 1875672 - 1875592
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | ||||||||||| |||| ||||||| |||| ||||||| || || |||||||| ||||||||    
T  1875672 aactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataa 1875592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 9300193 - 9300113
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||||| | ||||||||||| |||  ||||||| |||||||||||| || | ||||||||||||||||||    
T  9300193 aactaaaattaataagggtgttttagtaaatgctattaattttaccattaaaatcaacacaaacaatcattttcttaataa 9300113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 17719338 - 17719258
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||||| |||||||||||||| ||| || |||| ||||||||||| ||| || ||||||||| |||||||    
T  17719338 aactataattaataaggatattttagtaaataatactaactttaccattaaaatcattacaattaatcatttttttaataa 17719258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 10098071 - 10097990
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| | || ||||||||  ||  ||||||| ||| ||||||||||| || ||||||||||||||||||    
T  10098071 aactacaattaataagggtgttatagtaaatgatattaattttaccatcaaaatcaatacaattaatcattttcttaataac 10097990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 10180027 - 10179947
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||  |||||||||||||  ||| ||||||| |||| |||||||||| |  | |||||||||||||||    
T  10180027 aactacaattaataagtgtattttagtaaattatactaattttaccattgaaatcaatacaactactcattttcttaataa 10179947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 21216181 - 21216101
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | ||||||||||| | || ||||||| |||| ||||||| || || |||||||| ||||||||    
T  21216181 aactacaattaataaggatgttttagtaaatgcaactaattttaccattgaaatcaacacaattaatcatttccttaataa 21216101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 31271057 - 31271137
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||||  |||||||||| ||  ||  ||||||| |||||||||||| || ||||||||||||||||||||    
T  31271057 aactataattaataagagtattttagtatatgatattaattttaccattaaaatcaacacaatcaatcattttcttaataa 31271137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 39482651 - 39482731
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||||| | ||||||||||| |||| ||||||| | || ||||||| || || |||||||||||||||||    
T  39482651 aactataattaataagggtgttttagtaaattctactaattttacccttgaaatcaacacaattaatcattttcttaataa 39482731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 44761574 - 44761503
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattt 364  Q
    ||||||||||||||||| | ||||||||||| |||| ||||||| |||| ||||||| || || ||||||||    
T  44761574 aactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcattt 44761503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 379
Target Start/End: Complemental strand, 396691 - 396605
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataacgacta 379  Q
    ||||||||||||||||| |||| ||||||||  ||| ||||||| | || ||||||| |  || |||||||| ||||||||||||||    
T  396691 aactacaattaataaggatattgtagtaaatgatactaattttaccgttgaaatcaacataattaatcatttccttaataacgacta 396605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 370
Target Start/End: Complemental strand, 4428431 - 4428354
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    |||||||||||||||   |||||||||||||  ||  |||||||||||||||||||| || |  ||||||||||||||    
T  4428431 aactacaattaataattgtattttagtaaatgataataattttatcattaaaatcaacacaaataatcattttcttaa 4428354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 4924147 - 4924094
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaat 346  Q
    ||||||||||||||| | |||||||||||||| ||| ||||||| |||||||||    
T  4924147 aactacaattaataaagatattttagtaaataatactaattttaccattaaaat 4924094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 7172950 - 7173030
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||||||   | ||||||||||| |||| |||||||||||| ||||||| || || ||||||||  |||||||    
T  7172950 aactacaattaataaatatgttttagtaaatgctactaattttatcattgaaatcaacacaattaatcatttctttaataa 7173030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 26626192 - 26626112
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| ||||||| |||||  ||| ||||||| ||| ||| |||| || || |||||||| ||||||||    
T  26626192 aactacaattaataaggatattttaataaattatacaaattttaccatcaaattcaacacaattaatcatttccttaataa 26626112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 349
Target Start/End: Complemental strand, 36006967 - 36006911
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaa 349  Q
    |||||||||||||| || ||||||||| |||| ||  ||||||||||||||||||||    
T  36006967 aactacaattaatagggatattttagtcaataatattaattttatcattaaaatcaa 36006911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 42972588 - 42972508
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||||| ||||||||||||   ||  ||||||| |||| ||||||| || || |||||||||||||||||    
T  42972588 aactataattaataagggtattttagtaaacgatattaattttaccattgaaatcaaaacaattaatcattttcttaataa 42972508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 45425746 - 45425666
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||  | ||||| |||||  ||  ||||||| |||||||||||| || || |||||||||||||||||    
T  45425746 aactacaattaataagaatgttttaataaatgttattaattttaccattaaaatcaacacaattaatcattttcttaataa 45425666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 34394034 - 34393953
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||| ||||||||| | | |||||||||||  ||| ||||||| ||| |||||||| || || |||||||| |||||||||    
T  34394034 aactataattaataaaggtgttttagtaaattatactaattttaccatcaaaatcaacacaattaatcatttccttaataac 34393953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 349
Target Start/End: Complemental strand, 11977016 - 11976960
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaa 349  Q
    ||||||||||||||||| ||||||||||||| ||||  ||| || |||| |||||||    
T  11977016 aactacaattaataagggtattttagtaaatgctactgattataccattgaaatcaa 11976960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 367
Target Start/End: Complemental strand, 41687436 - 41687400
Alignment:
Q  331 attttatcattaaaatcaatactatcaatcattttct 367  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  41687436 attttatcattaaaatcaatattattaatcattttct 41687400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 7463256 - 7463337
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||| ||| ||||| ||||||| |||| |||||||||||| ||||||| || || |||||||| |||||||||    
T  7463256 aactacaattaatgagggtatttaagtaaatgctactaattttatcattgaaatcaacacaattaatcatttccttaataac 7463337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 24516375 - 24516295
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||||| |||||||||||  ||| ||||||| |||| ||||||| || || ||||||||| |||||||    
T  24516375 aactacaattaataaggtttttttagtaaatgttactaattttaccattgaaatcaacacaattaatcattttattaataa 24516295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 34100633 - 34100553
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||| | ||||||||||||| |||| |||||||  ||| ||||||| || || |||||||||||||||||    
T  34100633 aactacaattaataaagatattttagtaaatgctactaattttactattgaaatcaacacaattaatcattttcttaataa 34100553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 42935704 - 42935785
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| | |||||||||||  ||  ||||||| ||| |||||||| || || ||||||||||||||||||    
T  42935704 aactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcattttcttaataac 42935785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 28103776 - 28103856
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||| |||||| || | ||||||| |||| ||||||| || || |||||||||||||||||    
T  28103776 aactacaattaataagggtgttttggtaaatgctgctaattttaccattgaaatcaacacaattaatcattttcttaataa 28103856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 373
Target Start/End: Original strand, 38391769 - 38391871
Alignment:
Q  274 catccaacttaatta---cacaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    |||||||||||||||   ||| |||||||||||| |||  | |||||||||||  ||| ||||||| ||| |||||||| || || ||||||||||||||    
T  38391769 catccaacttaattattccactaactacaattaacaagagtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcattttcttaa 38391868  T
Q  371 taa 373  Q
    |||    
T  38391869 taa 38391871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 41506151 - 41506071
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||  | ||||||||||| |||| ||||||| ||||||||| || || || |||||||| ||||||||    
T  41506151 aactacaattaataagagtgttttagtaaatgctactaattttaccattaaaattaacacaattaatcatttccttaataa 41506071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 2850973 - 2850887
Alignment:
Q  287 tacacaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||| ||||||| ||| |||||||||||||| ||  |||||||||||| ||||||| |  || |||||||| ||||||||    
T  2850973 tacactaactataattaatgagggtattttagtaaataatattaattttatcattgaaatcaacataattaatcatttccttaataa 2850887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 27921031 - 27921112
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||  | ||||| |||||  ||| ||||||| |||||||||||| |  || ||||||||||||||||||    
T  27921031 aactacaattaataagagtgttttaataaatgatactaattttaccattaaaatcaacataattaatcattttcttaataac 27921112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 83428 - 83508
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||  | |||||||||||  ||| ||||||| ||| |||||||| || || |||||||| ||||||||    
T  83428 aactacaattaataagaatgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataa 83508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 759177 - 759097
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||||||||||  ||| | ||||| ||| |||||||| || || |||||||| ||||||||    
T  759177 aactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaatcaacacaattaatcatttccttaataa 759097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 3178290 - 3178210
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||| | | |||||||||||  ||  ||||||| ||| |||||||| || ||||||||||| ||||||||    
T  3178290 aactacaattaataaaggtgttttagtaaatgatattaattttaccatcaaaatcaacacaatcaatcatttacttaataa 3178210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 8592526 - 8592446
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | ||||| |||||||||| ||||| | |||| ||||||| || || ||||||||  |||||||    
T  8592526 aactacaattaataagggtgttttattaaatactactaatttaaccattgaaatcaacacaattaatcatttctttaataa 8592446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 11373514 - 11373434
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | ||||||||||| |||| ||||||| |||  ||||||| || || || ||||| ||||||||    
T  11373514 aactacaattaataagggtgttttagtaaatgctactaattttaccatcgaaatcaacacaattaaacatttccttaataa 11373434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 12631348 - 12631428
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | ||||  |||||||||| |||||||  ||| |||||||||| || ||| |||| ||||||||    
T  12631348 aactacaattaataaggatgttttgataaatactactaattttactattgaaatcaatacaattaattatttccttaataa 12631428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 13962002 - 13962082
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||| ||||||||| ||||||| ||| |  ||  |||||||||||||||||||| || || |||||||| ||||||||    
T  13962002 aactacacttaataaggatattttattaagtgatattaattttatcattaaaatcaacacaattaatcatttccttaataa 13962082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 21760070 - 21759990
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||| ||||| | ||||| |||||  ||| ||||||| ||| |||||||| || || |||||||||||||||||    
T  21760070 aactacaattagtaagggtgttttattaaatgatactaattttaccatcaaaatcaacacaattaatcattttcttaataa 21759990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 46478379 - 46478299
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| ||||||||||||| |||| || ||||  |||||||| || || || ||||||||  |||||||    
T  46478379 aactacaattaataagggtattttagtaaatgctactaactttactattaaaattaacacaattaatcatttaattaataa 46478299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 28202395 - 28202314
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| | |||||||||||   |  ||||||| ||| |||||||| || || ||| ||||||||||||||    
T  28202395 aactacaattaataaggatgttttagtaaatgacattaattttaccatcaaaatcaacacaattaattattttcttaataac 28202314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 373
Target Start/End: Original strand, 33819253 - 33819337
Alignment:
Q  289 cacaaactacaattaataag-gttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||| |||||||||||| || ||||| |||||| |||| ||||||| |||| ||||||| || || |||||||| ||||||||    
T  33819253 cacaaacaacaattaataagagtgatttt-gtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataa 33819337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 39452390 - 39452443
Alignment:
Q  296 tacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaa 349  Q
    |||||||||||||| |||||||||||||  ||  ||||||| ||||||||||||    
T  39452390 tacaattaataagggtattttagtaaatgatattaattttaccattaaaatcaa 39452443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 16560656 - 16560576
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||||||||||  ||| | ||||| ||| ||||| || || || |||||||| ||||||||    
T  16560656 aactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttccttaataa 16560576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 16605006 - 16605086
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||||||||||  ||| | ||||| ||| ||||| || || || |||||||| ||||||||    
T  16605006 aactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttccttaataa 16605086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 19271819 - 19271739
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||||||   ||||||||| ||| | || ||||| |||||| ||||||| || || ||||||||| |||||||    
T  19271819 aactacaattaataaaagtattttagtcaatgccactaatttgatcattgaaatcaacacaattaatcatttttttaataa 19271739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 349
Target Start/End: Complemental strand, 21350711 - 21350655
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaa 349  Q
    ||||||||||||||||| | ||||||||||||| || | ||||| |||| |||||||    
T  21350711 aactacaattaataagggtgttttagtaaatacaactatttttaccattgaaatcaa 21350655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 22738744 - 22738824
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||| ||| |||||||||||||  ||| ||||||| |||| ||||| | || || ||||||||  |||||||    
T  22738744 aactacaattaatgaggatattttagtaaatgatactaattttaccattgaaatctacacaattaatcatttctttaataa 22738824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 29835500 - 29835420
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||| |||||||||||  | ||||||||||| |||| ||||||| |||| ||||||| |  || |||||||| ||||||||    
T  29835500 aactgcaattaataagagtgttttagtaaatgctactaattttaccatttaaatcaacataattaatcatttccttaataa 29835420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 34947543 - 34947623
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||||||||||  ||  ||||||| |||| ||||||| || || ||||||||  |||||||    
T  34947543 aactacaattaataagggtgttttagtaaatgataataattttaccattgaaatcaacacaattaatcatttctttaataa 34947623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 44180268 - 44180328
Alignment:
Q  313 ttttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||  ||| ||||||| |||| ||||||| || || |||||||||||||||||    
T  44180268 ttttagtaaattatactaattttaccattgaaatcaacacaattaatcattttcttaataa 44180328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 370
Target Start/End: Complemental strand, 49176019 - 49175942
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||||| |||||   || || ||||||||||||||    
T  49176019 aactacaattaataaggttattttagtaaatgatactaattttatcattgaaatctccacaattaatcattttcttaa 49175942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 35380418 - 35380338
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||| | | ||||||||||| |||| ||||||| |||||||||||| |  || |||||||||||||||||    
T  35380418 aactacaattaataatgatgttttagtaaatgctactaattttaccattaaaatcaacataattaatcattttcttaataa 35380338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 5841512 - 5841433
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaata 372  Q
    ||||||||||||||||| |||||||||||||  ||  ||||||| ||||||||||||  | ||||||||||| |||||||    
T  5841512 aactacaattaataagggtattttagtaaatgatattaattttaccattaaaatcaacgcaatcaatcatttccttaata 5841433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 370
Target Start/End: Original strand, 461997 - 462071
Alignment:
Q  296 tacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    |||||||||||||| |||||||||||||| ||  | ||||| |||| |||||||||| || ||||||||||||||    
T  461997 tacaattaataaggatattttagtaaataatattacttttaccattgaaatcaatacaattaatcattttcttaa 462071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 17114476 - 17114557
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| | |||||||||||  ||| ||||||| ||| |||||||| || || |||||||| |||||||||    
T  17114476 aactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataac 17114557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 6643745 - 6643665
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||| | | ||||||||||| |||| ||||||| |||| ||||||| || || |||||||| ||||||||    
T  6643745 aactacaattaataaagatgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataa 6643665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 11907684 - 11907604
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||||||||||  ||| ||||||| ||| |||||||| || || |||||||| ||||||||    
T  11907684 aactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataa 11907604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 17237381 - 17237301
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||||| |||||||||||  ||| ||||||| ||||  |||||| || || ||| |||||||||||||    
T  17237381 aactacaattaataaggttgttttagtaaatgttactaattttaccattgcaatcaacacaattaattattttcttaataa 17237301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 28500976 - 28500896
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||| |||||||||||| |||||||||||||  ||  ||||||| |||| ||||||| || ||||||||||| ||||||||    
T  28500976 aactgcaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaatcaatcatttccttaataa 28500896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 34360691 - 34360771
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||  | ||||||||||| |||| ||||||| |||| |||||||||| || ||||||||  |||||||    
T  34360691 aactacaattaataagagtgttttagtaaatgctactaattttaccattgaaatcaatacaattaatcatttctttaataa 34360771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 40122939 - 40122859
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||| ||||||| | ||||||||||| |||| ||||||| ||||||||||||  | || |||||||| ||||||||    
T  40122939 aactacaatcaataagggtgttttagtaaatgctactaattttaacattaaaatcaacgcaattaatcatttccttaataa 40122859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 44536281 - 44536201
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | ||||| ||||| || | ||||||| |||||||||||| || || |||||||| ||||||||    
T  44536281 aactacaattaataagggtgttttaataaatcctgctaattttaccattaaaatcaacacaattaatcatttccttaataa 44536201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 47464450 - 47464370
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||  | ||||||||||| |||| ||||||| |||| ||||||| || || |||||||| ||||||||    
T  47464450 aactacaattaataagagttttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataa 47464370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 373
Target Start/End: Complemental strand, 49428449 - 49428347
Alignment:
Q  274 catccaacttaattac---acaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    ||||||||||||||||   || ||||||||||||||||| |||||||||||||  ||  ||||||| |||| ||||||| || |  |||||||| |||||    
T  49428449 catccaacttaattactccactaactacaattaataagggtattttagtaaattatattaattttaccattgaaatcaacacaaataatcatttccttaa 49428350  T
Q  371 taa 373  Q
    |||    
T  49428349 taa 49428347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 52247513 - 52247433
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| |||||||||||||  ||  ||||||| |||| |||| || || || |||||||||||||||||    
T  52247513 aactacaattaataaggatattttagtaaattgtattaattttaccattgaaattaacacaattaatcattttcttaataa 52247433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 52859884 - 52859804
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||||||||||  ||| ||||||| ||| |||||||| || || |||||||| ||||||||    
T  52859884 aactacaattaataaggatgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataa 52859804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 3098757 - 3098826
Alignment:
Q  296 tacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcatttt 365  Q
    |||||||||||| | |||||||||||||  || ||||||||||||| |||||||||  || |||||||||    
T  3098757 tacaattaataaagatattttagtaaatgatatcaattttatcattgaaatcaatataattaatcatttt 3098826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 19265844 - 19265925
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||| ||||||||||||||||||| ||||||  |  |||||||| ||| |||| ||||  || ||||||||||||||||||    
T  19265844 aactataattaataaggttattttaataaataacattaattttattattgaaataaatataattaatcattttcttaataac 19265925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 47773104 - 47773023
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| | |||||||||||  ||| ||||||| ||| |||||||| || || ||| |||| |||||||||    
T  47773104 aactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaattatttccttaataac 47773023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 2942729 - 2942650
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||||  ||||||||||| |||| |||||||||||  ||||||| || || ||||||||  |||||||    
T  2942729 aactacaattaataaggtg-ttttagtaaatgctactaattttatcatcgaaatcaacacaattaatcatttctttaataa 2942650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 7061749 - 7061669
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||| | |||| ||||||||  ||| ||||||| |||| ||||||| || || |||||||| ||||||||    
T  7061749 aactacaattaataaagatattatagtaaatgatactaattttaccattgaaatcaacacaattaatcatttccttaataa 7061669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 11288714 - 11288635
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||||||| | ||||||||||||  ||  ||||||  |||| |||||||||| || |||||||||||||||||    
T  11288714 aactacaattaataagat-attttagtaaatgatattaattttgccattgaaatcaatacaattaatcattttcttaataa 11288635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 32884837 - 32884917
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||  | ||||| ||||| |||| |||| || |||| ||||||| || || |||||||||||||||||    
T  32884837 aactacaattaataagagtgttttactaaatgctactaattctaccattgaaatcaacacaattaatcattttcttaataa 32884917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 33790816 - 33790736
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||||| ||||   || ||||||| ||| |||||||| || || |||||||||||||||||    
T  33790816 aactacaattaataagggtgttttagcaaatgaaactaattttaccatcaaaatcaacacaattaatcattttcttaataa 33790736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 38405187 - 38405107
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| |||||||||||||  ||  ||||||| |||| ||||||| |  || |||||||| ||||||||    
T  38405187 aactacaattaataagggtattttagtaaatgatattaattttaccatttaaatcaacagaattaatcatttccttaataa 38405107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 42517723 - 42517643
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||||| |||||||||||||  |   ||||||| |||| ||||||| || || |||||||||||||||||    
T  42517723 aactataattaataagggtattttagtaaatgatcttaattttaccattgaaatcaacacaattaatcattttcttaataa 42517643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 49746997 - 49747053
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaa 349  Q
    ||||| ||||||| | | |||||||||||||||||| |||||||||||| |||||||    
T  49746997 aactataattaatgaaggtattttagtaaatactactaattttatcattgaaatcaa 49747053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 36985822 - 36985893
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattt 364  Q
    |||||||||||||| || |||||||||||||  ||| ||||||| |||| ||||||| || || ||||||||    
T  36985822 aactacaattaatacgggtattttagtaaatgatactaattttaccattgaaatcaacacaattaatcattt 36985893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 16821416 - 16821346
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcatt 363  Q
    ||||| ||||||||||| |||| ||||||||  ||| |||||||||||| ||||||| || || |||||||    
T  16821416 aactataattaataaggatattatagtaaatgatactaattttatcattgaaatcaacacaattaatcatt 16821346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 373
Target Start/End: Original strand, 17121316 - 17121358
Alignment:
Q  331 attttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||||| | || ||||||||||||||||||    
T  17121316 attttatcattaaaatcaacaataccaatcattttcttaataa 17121358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 371
Target Start/End: Complemental strand, 46396968 - 46396890
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaat 371  Q
    ||||||||||||||||  | ||||||||||| |||  ||||||| |||| ||||||| || || |||||||| ||||||    
T  46396968 aactacaattaataagagtgttttagtaaatgctattaattttaccattgaaatcaacacaattaatcatttacttaat 46396890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 3689598 - 3689679
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||| ||||||||||  | |||||||||||  ||| ||||||| ||| ||||||||||| || ||||||||  ||||||||    
T  3689598 aactataattaataagagtgttttagtaaatgatactaattttaccatcaaaatcaatacaattaatcatttctttaataac 3689679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 370
Target Start/End: Original strand, 53412140 - 53412221
Alignment:
Q  289 cacaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    ||||||||| |||||||||   |||||||||||||  ||| ||||||| |||| |||||||||  || |||| |||||||||    
T  53412140 cacaaactataattaataaaaatattttagtaaatgatactaattttaccattgaaatcaataaaattaatcgttttcttaa 53412221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 2066825 - 2066905
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||||| | ||||| |||||| ||| || |||| ||| |||||||| || || |||||||| ||||||||    
T  2066825 aactaaaattaataagggtgttttaataaataatactaactttaccatcaaaatcaacacaattaatcatttccttaataa 2066905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 21240789 - 21240709
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | | |||||||||  ||| ||||||| ||| |||||||| ||  | |||||||| ||||||||    
T  21240789 aactacaattaataaggatgtgttagtaaatgatactaattttaccatcaaaatcaacacagttaatcatttccttaataa 21240709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 26147722 - 26147644
Alignment:
Q  274 catccaacttaattac---acaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaa 349  Q
    ||||||||||||||||   || ||||||||||||||||  | |||||||||||  ||| ||||||| ||| ||||||||    
T  26147722 catccaacttaattactccactaactacaattaataagaatgttttagtaaatgatactaattttaccatcaaaatcaa 26147644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 43237279 - 43237359
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||| | | |||||||||||| ||| ||||||| |||| |||| || || || |||||||| ||||||||    
T  43237279 aactataattaataatgattttttagtaaatattactaattttaccattgaaataaacacaattaatcatttccttaataa 43237359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 51625139 - 51625199
Alignment:
Q  313 ttttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||  ||| ||||||| |||| ||||||| || || |||||||||||||||||    
T  51625139 ttttagtaaatgttactaattttaccattgaaatcaacacaattaatcattttcttaataa 51625199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 53346795 - 53346875
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||||| | ||||||||||| |||  ||||||| |||| |||  || || |||||| |||||||||||||    
T  53346795 aactaaaattaataagggtgttttagtaaatgctattaattttaccattgaaactaacacaatcaattattttcttaataa 53346875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 16134 - 16214
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||  | ||||||||||| |||  |||||||||||||||||||| || || |||||||| ||||||||    
T  16134 aactacaattaataagtgtgttttagtaaatgctattaattttatcattaaaatcaacacaattaatcatttccttaataa 16214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 3291846 - 3291766
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||| | |||||||||||||| ||| ||| ||| |||||||||| |||| || |||||||| ||||||||    
T  3291846 aactacaattaataaaggtattttagtaaataatactaatattaccattaaaatcgatacaattaatcatttccttaataa 3291766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 370
Target Start/End: Complemental strand, 1063681 - 1063604
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    ||||||||||| | ||  |||||||||||||| ||| |||||||||||| ||||||| || || ||||||||||||||    
T  1063681 aactacaattactcagagtattttagtaaataatactaattttatcattgaaatcaacacaattaatcattttcttaa 1063604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 11656024 - 11655943
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| | |||||||||||   || ||||||| ||| |||||||| || || ||||||||||||||||||    
T  11656024 aactacaattaataagggtgttttagtaaatgacactaattttaccatcaaaatcaacacaattaatcattttcttaataac 11655943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 29363342 - 29363422
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||||||||||  ||| | ||||| ||| |||||||| || || |||||||||||||||||    
T  29363342 aactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaatcaacacaattaatcattttcttaataa 29363422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 31894288 - 31894208
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||| |   ||||||||||| |||| ||||||| |||| ||||||| || || |||||||||||||||||    
T  31894288 aactacaattaataatgacgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataa 31894208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 349
Target Start/End: Original strand, 34300035 - 34300087
Alignment:
Q  297 acaattaataaggttattttagtaaatactaccaattttatcattaaaatcaa 349  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||| |||||||    
T  34300035 acaattaataaggatattttagtaaataatactaattttatcattcaaatcaa 34300087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 371
Target Start/End: Complemental strand, 1956057 - 1955979
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaat 371  Q
    ||||||||||||||||  ||| |||||||||  ||| ||||||| |||| |||||||||| || |||| ||||||||||    
T  1956057 aactacaattaataagagtatattagtaaatgatactaattttaccattgaaatcaatacaattaatctttttcttaat 1955979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 23142705 - 23142783
Alignment:
Q  295 ctacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||| | ||||||||||| | || | ||||| |||| ||||||| || || |||||||||||||||||    
T  23142705 ctacaattaataagggtgttttagtaaatgccactatttttaccattgaaatcaacacaattaatcattttcttaataa 23142783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 374
Target Start/End: Complemental strand, 32440720 - 32440642
Alignment:
Q  296 tacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    |||||||||||||| | |||||||||||| ||| ||||||| ||| |||||||| || || |||||||| || ||||||    
T  32440720 tacaattaataagggtgttttagtaaataatactaattttaccatcaaaatcaacacaattaatcatttcctaaataac 32440642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 1781838 - 1781915
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    ||||||||||||||||| | ||||||||||| |||| ||||||| |||| | ||||| |  || ||||||||||||||    
T  1781838 aactacaattaataagggtgttttagtaaatgctactaattttaccattgagatcaacataattaatcattttcttaa 1781915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 3720319 - 3720239
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||  | |||| ||||||||||| |||||||| ||| ||||||| || || ||||||||  |||||||    
T  3720319 aactacaattaataagagtgtttttgtaaatactacaaattttataattgaaatcaacacaattaatcatttcattaataa 3720239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 373
Target Start/End: Original strand, 13087544 - 13087646
Alignment:
Q  274 catccaacttaattac---acaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    ||||||||||||||||   || ||||| ||||||||||| | |||||||||||  ||  ||||||| |||| ||||||| || || ||||| ||||||||    
T  13087544 catccaacttaattacttcactaactataattaataaggatgttttagtaaatgatattaattttaccattgaaatcaacacaattaatcactttcttaa 13087643  T
Q  371 taa 373  Q
    |||    
T  13087644 taa 13087646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 13909460 - 13909540
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| |||||||||||||   || ||||||| |||| ||||||| ||  | |||||||| ||||||||    
T  13909460 aactacaattaataagggtattttagtaaatgtcactaattttaccattgaaatcaacacatttaatcatttccttaataa 13909540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 15058153 - 15058233
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| ||||||||||||| | || ||||||| |||| |||| ||    || |||||||||||||||||    
T  15058153 aactacaattaataagggtattttagtaaatgccactaattttaccattgaaattaacttaattaatcattttcttaataa 15058233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 21018815 - 21018875
Alignment:
Q  313 ttttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||| |||  ||||||||||||||||||||| ||  |||||||| ||||||||    
T  21018815 ttttagtaaataatacatattttatcattaaaatcaatagtagtaatcatttccttaataa 21018875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 12438824 - 12438782
Alignment:
Q  331 attttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||| ||||||||||||||||||  ||||||||||||||||    
T  12438824 attttaccattaaaatcaatactattcatcattttcttaataa 12438782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 5302387 - 5302468
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| | |||| ||||||  ||  ||||||| ||| |||||||| ||  | ||||||||||||||||||    
T  5302387 aactacaattaataaggatgttttggtaaattatattaattttaccatcaaaatcaacacatttaatcattttcttaataac 5302468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 6801967 - 6802048
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    |||||||||||||||||   |||||||||||  ||  ||||||| ||| |||||||| |  || ||||||||||||||||||    
T  6801967 aactacaattaataagggcgttttagtaaatgatattaattttaccatcaaaatcaacataattaatcattttcttaataac 6802048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 373
Target Start/End: Complemental strand, 27448231 - 27448154
Alignment:
Q  296 tacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||| | | |||||||||||  ||| ||||| ||||| |||||||| || || |||||||| ||||||||    
T  27448231 tacaattaataatgatgttttagtaaatgatactaatttcatcatcaaaatcaacacaattaatcatttccttaataa 27448154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 30716936 - 30717017
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| | ||| |||||||  ||| ||||||| ||| ||| ||||||  || |||||||| |||||||||    
T  30716936 aactacaattaataagggtgtttaagtaaatgatactaattttaccatcaaagtcaataaaattaatcatttccttaataac 30717017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 181592 - 181671
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||| | | |||||||||||||||| |||||||  ||| |||||||||| || ||| ||||| |||||||    
T  181592 aactataattaataatgatgttttagtaaatactactaattttactattgaaatcaatacaattaat-atttttttaataa 181671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 373
Target Start/End: Original strand, 12340035 - 12340075
Alignment:
Q  333 tttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| ||||  |||||||||||||||||    
T  12340035 tttatcattaaaatcaacactactaatcattttcttaataa 12340075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 365
Target Start/End: Original strand, 17835398 - 17835492
Alignment:
Q  274 catccaacttaattac---acaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcatttt 365  Q
    |||||||||||| |||   ||||||||||||||||||   |||||||||||||   |  |||||||| |||||||||||||| || ||| |||||    
T  17835398 catccaacttaactactaaacaaactacaattaataaatgtattttagtaaatgagattaattttattattaaaatcaatacaattaattatttt 17835492  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 21010213 - 21010293
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||| |||||| | |||||||||||  ||| ||||||  ||| ||||| || || || |||||||||||||||||    
T  21010213 aactacaatttataagggtgttttagtaaatgatactaatttttccatcaaaattaacacaattaatcattttcttaataa 21010293  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 26592358 - 26592438
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||| || |||| ||| |||||||||  |||  |||||| |||||||||||||| ||| |||||||| ||||||||    
T  26592358 aactataataaacaagggtatattagtaaatgatacacattttaccattaaaatcaatattattaatcatttccttaataa 26592438  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 8947129 - 8947049
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||||| | |||||||||||| ||| |||||||||||| ||||||| || || |||||||| ||||||||    
T  8947129 aactataattaataaggatgttttagtaaatattactaattttatcattgaaatcaacacaattaatcatttccttaataa 8947049  T

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Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 35313923 - 35314003
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||||||||||  |||| |||||||||| ||||||| |||| ||||||| || || |||||||| ||||||||    
T  35313923 aactacaattaataaggttgctttaataaatactactaattttaccattgaaatcaacacaattaatcatttccttaataa 35314003  T

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Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 15359164 - 15359083
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| | |||||||||||  ||  ||||||||||| |||||||| || || |||||| |||||||||||    
T  15359164 aactacaattaataagggtgttttagtaaatgatattaattttatcatcaaaatcaacacaattaatcatcttcttaataac 15359083  T

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Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 16463725 - 16463806
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| | |||||||||||  ||| ||||||| ||| |||||||| || || |||||||| |||||||||    
T  16463725 aactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataac 16463806  T

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Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 16805917 - 16805997
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| |||||||||||||  ||| |||||||  ||||||||||| || || ||||||||  |||||||    
T  16805917 aactacaattaataaggatattttagtaaatgatactaattttactattaaaatcaacacaattaatcatttctttaataa 16805997  T

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Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 16845198 - 16845278
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| |||||||||||||  ||| |||||||  ||||||||||| || || ||||||||  |||||||    
T  16845198 aactacaattaataaggatattttagtaaatgatactaattttactattaaaatcaacacaattaatcatttctttaataa 16845278  T

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Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 34225626 - 34225706
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||||||||||| ||| || |||| ||||||||||||||  || | |||||| ||||||||    
T  34225626 aactacaattaataagggtgttttagtaaataatactaagtttaccattaaaatcaatataattattcatttccttaataa 34225706  T

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Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 39691526 - 39691606
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||| |||||||||||  |||||||||||||  ||  |||||||||||| ||||||| || || |||||||||||||||||    
T  39691526 aactgcaattaataagagtattttagtaaatgatattaattttatcattgaaatcaacacaattaatcattttcttaataa 39691606  T

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Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 45235617 - 45235697
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||||||||||  ||  ||||||| |||| ||||||| || ||||||||||| ||||||||    
T  45235617 aactacaattaataagggtgttttagtaaatgatattaattttaccattgaaatcaacacaatcaatcatttccttaataa 45235697  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 14523449 - 14523368
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||||||| |||||||||||||  ||  ||||||| |||| ||||||| || |  |||||||| |||||||||    
T  14523449 aactacaattaataaggatattttagtaaatgatattaattttaccattgaaatcaacacaaaaaatcatttccttaataac 14523368  T

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Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 27866528 - 27866604
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    ||||||||||||||||| ||||||| |||| | ||  |||||||||||||||||||| | ||| |||||||| |||||    
T  27866528 aactacaattaataaggatattttactaaaga-tattaattttatcattaaaatcaacattattaatcatttccttaa 27866604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 34120514 - 34120436
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||||||   |||||||||||||| ||| | ||||| ||| |||||||| || || |||||||||||||||||    
T  34120514 aactacaattaataaa--tattttagtaaataatactagttttaccatcaaaatcaacacaattaatcattttcttaataa 34120436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 366
Target Start/End: Original strand, 37322464 - 37322537
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttc 366  Q
    ||||||||||||||||| ||||||| |||||  ||  ||||||| |||| ||||||| || |||||||||||||    
T  37322464 aactacaattaataagggtattttaataaatgatattaattttaccattgaaatcaacacaatcaatcattttc 37322537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 5789725 - 5789645
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | ||||||||||| | || |||||||  ||| || ||||||| || |||||||| ||||||||    
T  5789725 aactacaattaataagggtgttttagtaaatgccactaattttactattgaattcaatacaattaatcatttccttaataa 5789645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 43115879 - 43115799
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||| ||||||  ||||||||||||| |||| || ||||||||| ||||||| || || ||||||||  |||||||    
T  43115879 aactacaataaataagagtattttagtaaatgctactaactttatcattgaaatcaacacaattaatcatttctttaataa 43115799  T

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Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 43410462 - 43410542
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| |||||||||||||  ||  |||||||||||| | ||||| || || ||| |||| ||||||||    
T  43410462 aactacaattaataaggatattttagtaaatgatattaattttatcattgatatcaacacaattaataatttccttaataa 43410542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 374
Target Start/End: Complemental strand, 34438072 - 34437997
Alignment:
Q  299 aattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||  |||||||||||||  |||  ||||| ||||||||||||| | ||| ||||||||| ||||||||    
T  34438072 aattaataagaatattttagtaaatgatacatattttgtcattaaaatcaacattattaatcatttttttaataac 34437997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 352
Target Start/End: Complemental strand, 39329741 - 39329682
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatac 352  Q
    ||||||||||||||||  | ||||||||||| |||  |||||||||||| ||||||||||    
T  39329741 aactacaattaataagagtgttttagtaaatgctattaattttatcattgaaatcaatac 39329682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 33729993 - 33729913
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||| ||||||||||| ||||||| ||||||  ||  ||||||| ||| ||||||| ||||  ||||||||||||||||||    
T  33729993 aactataattaataaggatattttaataaataa-acatattttatgattgaaatcaacactaataatcattttcttaataac 33729913  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 349
Target Start/End: Complemental strand, 1206780 - 1206724
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaa 349  Q
    ||||||||||||||||| |||||||||||||  ||| ||||||| || | |||||||    
T  1206780 aactacaattaataaggatattttagtaaatgttactaattttaccactgaaatcaa 1206724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 16377733 - 16377653
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||||||||||||||| ||||||  ||  ||||||| ||||  |||||| || || ||||||||  |||||||    
T  16377733 aactacaattaataaggttattttggtaaatgatattaattttaccattgtaatcaacacaattaatcatttctttaataa 16377653  T

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Target: scaffold0294 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 17071 - 17151
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||||| | || || ||||| |||| ||||||| |||| ||||||| || || |||||||||||||||||    
T  17071 aactataattaataagggtgttctaataaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataa 17151  T

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Target: scaffold0159 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 34098 - 34018
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | ||||||||||| | || |||||||  ||| || ||||||| || |||||||| ||||||||    
T  34098 aactacaattaataagggtgttttagtaaatgccactaattttactattgaattcaatacaattaatcatttccttaataa 34018  T

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Target: scaffold0328 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 374
Target Start/End: Complemental strand, 8082 - 7979
Alignment:
Q  274 catccaacttaattac---acaaactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaa 370  Q
    ||||||||||||||||   || ||||||||||||||||| | |||| ||||||| ||  ||||||| |||  ||||||| |  || |||||||| |||||    
T  8082 catccaacttaattactccactaactacaattaataagggtgttttggtaaataatattaattttaccatccaaatcaacaaaattaatcatttccttaa 7983  T
Q  371 taac 374  Q
    ||||    
T  7982 taac 7979  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 373
Target Start/End: Original strand, 39127 - 39204
Alignment:
Q  296 tacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    |||||||||||| | | |||||||||||  ||| ||||| ||||| |||||||| || || |||||||| ||||||||    
T  39127 tacaattaataatgatgttttagtaaatgatactaatttcatcatcaaaatcaacacaattaatcatttccttaataa 39204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 2061 - 2141
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | |||||||||||  ||  |||||||||||| |||| || || || ||||| || ||||||||    
T  2061 aactacaattaataaggatgttttagtaaatgatattaattttatcattgaaattaacacaattaatcacttccttaataa 2141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 5426 - 5506
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||||| |||||||||||||  ||  ||||||| |||| || |||| ||  | |||||||||||||||||    
T  5426 aactaaaattaataaggatattttagtaaatgatattaattttaccattgaattcaacacagttaatcattttcttaataa 5506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 1741 - 1821
Alignment:
Q  294 actacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataac 374  Q
    ||||||||||||| || | ||| |||||||  ||| ||||||| ||| |||||||| |  || ||||||||||||||||||    
T  1741 actacaattaatacgggtgtttaagtaaatgatactaattttaccatcaaaatcaacataattaatcattttcttaataac 1821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 136116 - 136036
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||| ||||||||||| | ||||||||||| |||  ||||||| |||| ||||||| | ||| ||||||||  |||||||    
T  136116 aactataattaataagggtgttttagtaaatgctattaattttaccattgaaatcaacattattaatcatttatttaataa 136036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 373
Target Start/End: Original strand, 105720 - 105800
Alignment:
Q  293 aactacaattaataaggttattttagtaaatactaccaattttatcattaaaatcaatactatcaatcattttcttaataa 373  Q
    ||||||||||||||||| | ||||||||||  |||  ||||||| |||| |||| || || || |||||||| ||||||||    
T  105720 aactacaattaataagggtgttttagtaaacgctattaattttaccattgaaataaacacaattaatcatttacttaataa 105800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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