View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5683-Insertion-2 (Length: 993)

Name: NF5683-Insertion-2
Description: NF5683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5683-Insertion-2
NF5683-Insertion-2
[»] chr2 (47 HSPs)
chr2 (8-988)||(2336322-2337306)
chr2 (715-906)||(2323964-2324157)
chr2 (88-441)||(2323403-2323746)
chr2 (678-848)||(2344242-2344412)
chr2 (13-178)||(2313595-2313751)
chr2 (341-447)||(30313209-30313314)
chr2 (363-448)||(39693911-39693990)
chr2 (302-370)||(13154479-13154547)
chr2 (341-409)||(33561510-33561578)
chr2 (302-408)||(31385729-31385835)
chr2 (341-409)||(30323495-30323563)
chr2 (341-447)||(29873558-29873664)
chr2 (317-412)||(33599616-33599711)
chr2 (315-438)||(13766789-13766914)
chr2 (341-407)||(29874084-29874150)
chr2 (341-386)||(33953853-33953898)
chr2 (302-380)||(25389983-25390061)
chr2 (341-406)||(3594240-3594305)
chr2 (316-412)||(18012501-18012595)
chr2 (352-409)||(28531373-28531430)
chr2 (352-409)||(37105966-37106023)
chr2 (341-386)||(41678449-41678494)
chr2 (341-409)||(962629-962697)
chr2 (341-409)||(28254296-28254364)
chr2 (341-409)||(42514680-42514748)
chr2 (311-374)||(20062462-20062525)
chr2 (354-409)||(36005939-36005994)
chr2 (321-435)||(2803199-2803313)
chr2 (352-409)||(14745726-14745783)
chr2 (352-409)||(15511554-15511611)
chr2 (352-409)||(15880305-15880362)
chr2 (344-409)||(30312823-30312888)
chr2 (352-409)||(36178664-36178721)
chr2 (352-409)||(38796679-38796736)
chr2 (352-405)||(41283538-41283591)
chr2 (379-444)||(2313878-2313945)
chr2 (365-441)||(24968021-24968096)
chr2 (316-443)||(25390293-25390420)
chr2 (397-444)||(45634826-45634873)
chr2 (344-425)||(37842551-37842633)
chr2 (352-409)||(5543057-5543114)
chr2 (352-409)||(6421427-6421484)
chr2 (341-442)||(7598259-7598360)
chr2 (301-446)||(18204406-18204550)
chr2 (341-386)||(28254194-28254239)
chr2 (352-409)||(36178230-36178287)
chr2 (352-409)||(37106230-37106287)
[»] chr8 (34 HSPs)
chr8 (302-446)||(40991745-40991889)
chr8 (368-446)||(11442911-11442990)
chr8 (341-409)||(4154340-4154407)
chr8 (341-409)||(4154725-4154793)
chr8 (341-405)||(9620739-9620803)
chr8 (371-483)||(30737602-30737715)
chr8 (352-409)||(45121969-45122026)
chr8 (302-386)||(5172870-5172954)
chr8 (344-442)||(7480224-7480322)
chr8 (340-386)||(34219215-34219261)
chr8 (381-442)||(11970313-11970373)
chr8 (315-407)||(4715281-4715373)
chr8 (351-406)||(5274816-5274871)
chr8 (352-409)||(3038349-3038406)
chr8 (352-409)||(3669729-3669786)
chr8 (365-438)||(5870399-5870472)
chr8 (322-419)||(6104582-6104679)
chr8 (364-409)||(33113426-33113471)
chr8 (352-409)||(34835251-34835308)
chr8 (352-409)||(45122666-45122723)
chr8 (354-414)||(25561870-25561930)
chr8 (341-409)||(40518613-40518681)
chr8 (352-407)||(20870634-20870689)
chr8 (352-386)||(8918846-8918880)
chr8 (352-406)||(9482666-9482720)
chr8 (365-423)||(35224721-35224779)
chr8 (352-409)||(9483246-9483303)
chr8 (352-409)||(18372053-18372110)
chr8 (352-409)||(34835517-34835574)
chr8 (352-409)||(34835783-34835840)
chr8 (340-369)||(40417618-40417647)
chr8 (341-446)||(40417738-40417843)
chr8 (352-409)||(40518113-40518170)
chr8 (341-386)||(41972189-41972234)
[»] chr4 (48 HSPs)
chr4 (318-446)||(29802549-29802677)
chr4 (301-444)||(41603213-41603356)
chr4 (686-780)||(36799324-36799418)
chr4 (366-446)||(2041137-2041217)
chr4 (302-406)||(7147702-7147805)
chr4 (354-446)||(31957544-31957636)
chr4 (316-465)||(23630310-23630459)
chr4 (315-446)||(37660829-37660960)
chr4 (341-446)||(15841388-15841493)
chr4 (341-446)||(760220-760324)
chr4 (377-446)||(30788285-30788354)
chr4 (341-414)||(34544137-34544210)
chr4 (354-464)||(53667333-53667443)
chr4 (341-386)||(28034260-28034305)
chr4 (390-446)||(31894663-31894719)
chr4 (343-446)||(10452335-10452438)
chr4 (347-398)||(11348396-11348447)
chr4 (365-436)||(9965910-9965980)
chr4 (344-441)||(23210821-23210916)
chr4 (354-411)||(36572063-36572120)
chr4 (335-392)||(43119434-43119491)
chr4 (352-409)||(49880202-49880259)
chr4 (352-409)||(50002468-50002525)
chr4 (352-409)||(50630812-50630869)
chr4 (344-436)||(18975836-18975927)
chr4 (315-446)||(30249707-30249839)
chr4 (341-409)||(36629268-36629336)
chr4 (352-423)||(52884929-52885001)
chr4 (355-438)||(18637151-18637234)
chr4 (411-446)||(19958056-19958091)
chr4 (352-423)||(22028004-22028075)
chr4 (351-386)||(44620701-44620736)
chr4 (324-371)||(53203749-53203796)
chr4 (341-399)||(23556933-23556991)
chr4 (352-409)||(2741113-2741170)
chr4 (352-409)||(3340849-3340906)
chr4 (352-409)||(3341170-3341227)
chr4 (352-409)||(4955374-4955431)
chr4 (302-363)||(10370108-10370169)
chr4 (341-378)||(15841072-15841109)
chr4 (341-386)||(31249938-31249983)
chr4 (364-409)||(31691206-31691251)
chr4 (352-409)||(39404060-39404117)
chr4 (352-409)||(45496847-45496904)
chr4 (304-433)||(45834451-45834580)
chr4 (316-429)||(53204129-53204242)
chr4 (352-409)||(54108955-54109011)
chr4 (352-409)||(54936238-54936295)
[»] chr3 (32 HSPs)
chr3 (311-444)||(41857425-41857558)
chr3 (372-446)||(50329354-50329428)
chr3 (315-412)||(2417322-2417419)
chr3 (318-442)||(32930695-32930820)
chr3 (341-445)||(47964541-47964645)
chr3 (316-444)||(33153563-33153690)
chr3 (366-446)||(45717831-45717911)
chr3 (349-407)||(39336290-39336348)
chr3 (376-446)||(50329645-50329715)
chr3 (343-444)||(25317191-25317292)
chr3 (318-378)||(30399664-30399724)
chr3 (380-442)||(1454938-1455001)
chr3 (344-446)||(21867968-21868071)
chr3 (348-386)||(12749207-12749245)
chr3 (350-447)||(39335991-39336088)
chr3 (352-409)||(32589745-32589802)
chr3 (352-409)||(43346850-43346907)
chr3 (341-409)||(12114621-12114689)
chr3 (341-409)||(21832402-21832470)
chr3 (341-409)||(47964974-47965042)
chr3 (358-409)||(4823703-4823754)
chr3 (352-423)||(35946564-35946635)
chr3 (343-406)||(46546387-46546450)
chr3 (352-442)||(41359791-41359881)
chr3 (352-409)||(3384325-3384382)
chr3 (354-407)||(15772898-15772951)
chr3 (352-409)||(22304611-22304668)
chr3 (351-400)||(26605729-26605778)
chr3 (352-409)||(33362352-33362409)
chr3 (352-409)||(37991036-37991093)
chr3 (352-409)||(42342447-42342504)
chr3 (364-409)||(52634994-52635039)
[»] chr6 (31 HSPs)
chr6 (302-466)||(34661611-34661775)
chr6 (335-446)||(5034843-5034954)
chr6 (341-447)||(12092503-12092609)
chr6 (341-407)||(6071163-6071229)
chr6 (344-442)||(20848353-20848452)
chr6 (344-409)||(8481960-8482025)
chr6 (345-438)||(28033236-28033328)
chr6 (341-442)||(10074389-10074490)
chr6 (352-409)||(3409301-3409358)
chr6 (342-442)||(10073642-10073742)
chr6 (358-446)||(5035343-5035431)
chr6 (311-374)||(11328889-11328952)
chr6 (401-444)||(34900626-34900669)
chr6 (341-423)||(10074036-10074118)
chr6 (377-446)||(405043-405112)
chr6 (352-409)||(2377796-2377853)
chr6 (352-409)||(2578502-2578559)
chr6 (389-430)||(3624849-3624890)
chr6 (354-407)||(16454619-16454672)
chr6 (352-409)||(35210246-35210303)
chr6 (392-448)||(3075926-3075982)
chr6 (352-407)||(1846790-1846845)
chr6 (352-423)||(2579917-2579988)
chr6 (341-380)||(33605685-33605724)
chr6 (352-409)||(14748397-14748454)
chr6 (381-442)||(29028161-29028222)
chr6 (352-409)||(29518545-29518602)
chr6 (352-409)||(29518962-29519019)
chr6 (341-406)||(31714701-31714765)
chr6 (352-409)||(32460639-32460696)
chr6 (352-409)||(32741221-32741278)
[»] chr7 (30 HSPs)
chr7 (389-442)||(23714886-23714939)
chr7 (340-385)||(42282101-42282146)
chr7 (317-421)||(28855780-28855884)
chr7 (352-442)||(7517622-7517712)
chr7 (352-423)||(37533056-37533126)
chr7 (352-409)||(1085675-1085732)
chr7 (352-409)||(37533423-37533480)
chr7 (352-444)||(3114464-3114556)
chr7 (354-422)||(36939779-36939847)
chr7 (352-407)||(11845233-11845288)
chr7 (352-442)||(19122773-19122863)
chr7 (352-409)||(22566721-22566778)
chr7 (352-405)||(22567102-22567155)
chr7 (352-409)||(29157607-29157664)
chr7 (352-409)||(30245119-30245176)
chr7 (355-412)||(33773281-33773338)
chr7 (341-386)||(37345949-37345994)
chr7 (352-409)||(45434678-45434735)
chr7 (341-381)||(10341863-10341903)
chr7 (302-386)||(42730308-42730392)
chr7 (340-407)||(4124149-4124216)
chr7 (354-409)||(6054604-6054659)
chr7 (352-442)||(30244312-30244402)
chr7 (344-423)||(45679478-45679557)
chr7 (365-443)||(22768538-22768616)
chr7 (390-444)||(32567963-32568017)
chr7 (328-449)||(40639585-40639707)
chr7 (352-409)||(23436-23493)
chr7 (381-442)||(7192786-7192847)
chr7 (349-426)||(45335508-45335585)
[»] chr5 (28 HSPs)
chr5 (685-780)||(12969615-12969710)
chr5 (335-453)||(32445910-32446028)
chr5 (316-418)||(31866026-31866128)
chr5 (341-397)||(31509654-31509710)
chr5 (341-397)||(31509762-31509818)
chr5 (341-409)||(41632813-41632881)
chr5 (317-412)||(2828061-2828156)
chr5 (352-446)||(26074654-26074748)
chr5 (343-406)||(26590972-26591035)
chr5 (352-409)||(9498713-9498770)
chr5 (315-444)||(9510544-9510673)
chr5 (341-409)||(19275560-19275627)
chr5 (352-414)||(26075216-26075278)
chr5 (302-399)||(10351242-10351339)
chr5 (352-409)||(18603179-18603236)
chr5 (341-409)||(36521955-36522023)
chr5 (340-383)||(6557471-6557514)
chr5 (354-409)||(25327979-25328034)
chr5 (352-407)||(33747813-33747868)
chr5 (315-386)||(36522319-36522390)
chr5 (365-444)||(38015864-38015943)
chr5 (352-442)||(35150049-35150138)
chr5 (341-386)||(1028599-1028644)
chr5 (352-405)||(6224238-6224291)
chr5 (390-435)||(9048710-9048755)
chr5 (352-409)||(15370141-15370198)
chr5 (352-409)||(40296374-40296431)
chr5 (352-409)||(41170676-41170733)
[»] chr1 (37 HSPs)
chr1 (341-448)||(1188608-1188715)
chr1 (352-442)||(26661548-26661638)
chr1 (317-464)||(2229264-2229416)
chr1 (365-448)||(47057726-47057809)
chr1 (344-406)||(1187426-1187488)
chr1 (352-409)||(17294619-17294676)
chr1 (342-407)||(24448309-24448374)
chr1 (371-467)||(30208187-30208284)
chr1 (344-453)||(30576598-30576707)
chr1 (341-409)||(5320024-5320092)
chr1 (341-409)||(10351191-10351259)
chr1 (317-421)||(17996014-17996118)
chr1 (365-435)||(8240396-8240467)
chr1 (352-422)||(44290870-44290941)
chr1 (318-446)||(50081077-50081207)
chr1 (344-442)||(8240630-8240728)
chr1 (341-407)||(19283516-19283582)
chr1 (365-435)||(43400621-43400691)
chr1 (390-435)||(7373363-7373408)
chr1 (340-405)||(12772902-12772967)
chr1 (341-386)||(22793309-22793354)
chr1 (352-409)||(32594775-32594832)
chr1 (352-409)||(41157033-41157090)
chr1 (352-409)||(48588547-48588604)
chr1 (341-409)||(22077554-22077622)
chr1 (352-400)||(41184493-41184541)
chr1 (352-387)||(44091936-44091971)
chr1 (302-392)||(3458679-3458767)
chr1 (341-407)||(22077171-22077237)
chr1 (335-453)||(30207834-30207948)
chr1 (399-444)||(3808930-3808975)
chr1 (352-409)||(14318909-14318966)
chr1 (352-409)||(26661957-26662014)
chr1 (352-409)||(31767220-31767277)
chr1 (352-409)||(34364967-34365024)
chr1 (352-409)||(40082449-40082505)
chr1 (352-409)||(44290517-44290574)
[»] scaffold0078 (1 HSPs)
scaffold0078 (352-407)||(5399-5454)
[»] scaffold0702 (1 HSPs)
scaffold0702 (352-409)||(573-630)
[»] scaffold0807 (1 HSPs)
scaffold0807 (340-400)||(3108-3168)
[»] scaffold0734 (1 HSPs)
scaffold0734 (352-403)||(5819-5870)
[»] scaffold0450 (1 HSPs)
scaffold0450 (372-426)||(13003-13055)
[»] scaffold0113 (1 HSPs)
scaffold0113 (341-378)||(39487-39524)
[»] scaffold0002 (1 HSPs)
scaffold0002 (365-442)||(15436-15513)


Alignment Details
Target: chr2 (Bit Score: 892; Significance: 0; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 892; E-Value: 0
Query Start/End: Original strand, 8 - 988
Target Start/End: Original strand, 2336322 - 2337306
Alignment:
Q  8 ggaagtacaggaatacagtaagatataatgcaattaacgccttcttttctcaaacaagaaatcaagaacatagggtgttgtcatggtttagtaaaaaggc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2336322 ggaagtacaggaatacagtaagatataatgcaattaacgccttcttttctcaaacaagaaatcaagaacatagggtgttgtcatggtttagtaaaaaggc 2336421  T
Q  108 tttacctttagaattgatgagaaatgaaaaagcactcatgcaagatatccttaaattattgcaataagggataaacaacctggggttcatatttggttac 207  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2336422 tttacctttaaaattgatgagaaatgaaaaagcactcatgcaagatatccttaaattattgcaataagggataaacaacctggggttcatatttggttac 2336521  T
Q  208 agacctatttttcgtccaactaaatggctcggctcaagtggttcacattcgggaacatttgagttcaaatccaaggtggagcaatgcttggtggtgttgt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  2336522 agacctatttttcgtccaactaaatggctcggctcaagtggttcacattcgggaacatttgagttcaaatcctgggtggagcaatccttggtggtgttgt 2336621  T
Q  308 gttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2336622 gtagcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 2336721  T
Q  408 gttaagatgtggtgtccaactcacttgtgtggttgctctgaacccagtgtcgatgatcaccagactcccctcgtgatccaccacttggctagactttact 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2336722 gttaagatgtggtgtccaactcacttgtgtggttgctctgaacccaatgtcgatgatcaccagactcccctcgtgatccaccacttggctagactttact 2336821  T
Q  508 tatcttccgtcctgttataatggctagactcccctcgtgacccaccacttggctagactttacttatcttctgtccggttataatgggtgctgatgttgt 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  2336822 tatcttccgtcctgttataatggctagactcccctcgtgacccaccacttggctagactttacttatctgctgtcgggttataatgggtgctgatgttgt 2336921  T
Q  608 tgtgttcaatgccctaacatgtaaaagtaaattttgagcaatttaatannnnnnnactatatttttcctattgtgtgcaggggggattttaaattgaaca 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||||||||||||||    
T  2336922 tgtgttcaatgccctaacatgtaaaagtaaattttgagcaatttaatatttttttactatatttttcctactgtgtgcaggggggattttaaattgaaca 2337021  T
Q  708 attttgaagatggagttttgtcatctgcttttatggttggacttctcgtggcttctccaatatttgcctctctagctcagaggtaattacaataaccatt 807  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2337022 attttgaagatggagttttgtcatctgcttttatggttggacttctcgtggcttctccaatatttgcctctctagctcagaggtaattagaataaccatt 2337121  T
Q  808 catgttccaatcaatatgaaacctattcttattattagatatagttttattagcttaaatatacagcagatgaatgcttcataatataagttgcaaatga 907  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2337122 catgttccaatcaatatgaaacctattcttattattagatatagttttattagcttaaatatacagcagatgaatgcttcataatataagttgcaaatga 2337221  T
Q  908 att-aaattcttaaagctg-acgtgatttt-aaccaccacagagcaatcatatcg-atttcaagttgtccttcttgatgtgcaat 988  Q
    ||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2337222 attaaaattcttaaagctgaacgtgattttaaaccaccacagagcaatcatatcgaatttcaagttgtccttcttgatgtgcaat 2337306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 715 - 906
Target Start/End: Original strand, 2323964 - 2324157
Alignment:
Q  715 agatggagttttgtcatctgcttttatggttggacttctcgtggcttctccaatatttgcctctctagctcagaggtaattacaataaccattcatgttc 814  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||| | |||||||||||||||||||   |||||||||||||||    
T  2323964 agatggagttttatcatctgcttttatgggtggacttcttgtggcttctccaatatttgcatttctagctcagaggtaattaatgtaaccattcatgttc 2324063  T
Q  815 caatcaatatgaaacctattcttattattagatatagttttattagcttaaatatacagcaga--tgaatgcttcataatataagttgcaaatg 906  Q
    |||||||  ||||||||||||||| |||| |||||| |||||||| ||||||||||||||| |  |  ||||||||||| ||||||||||||||    
T  2324064 caatcaaagtgaaacctattcttagtattcgatatacttttattatcttaaatatacagcacacatatatgcttcataagataagttgcaaatg 2324157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 88 - 441
Target Start/End: Original strand, 2323403 - 2323746
Alignment:
Q  88 tcatggtttagtaaaaaggctttacctttagaattga-tgagaaatgaaaaagcactcatgcaagatatccttaaattattgcaataaggga-taaacaa 185  Q
    ||||||||||| ||||||| |||||||||| || | | ||  |||||||||||||||| ||||||||||||| |||||||||||| |||||| |||||||    
T  2323403 tcatggtttagaaaaaaggttttacctttaaaaatcaatgccaaatgaaaaagcactcgtgcaagatatcctaaaattattgcaacaagggaataaacaa 2323502  T
Q  186 cctggggttcatatttggttacagacctatttttcgtccaactaaatggctcggctcaagtggttcacattcgggaacatttgagttcaaatccaaggtg 285  Q
    | ||||| ||||  ||||||||| ||||| ||||||||||       ||||  ||||| ||||| |||| | ||||| |||||||||||||||   | ||    
T  2323503 catggggatcatccttggttaca-acctagttttcgtcca-------ggctttgctcatgtggtccacacttgggaatatttgagttcaaatcttggctg 2323594  T
Q  286 gagcaatgcttggtggtgttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataa 385  Q
     |||||| ||   ||||||||||| | | |||||| |||||||| ||   ||| |||||||| ||||||||| |||||||||||||||||||| ||||||    
T  2323595 aagcaatcct---tggtgttgtgtagaaggtgtgaattagaagtctcgctttgtttagaaaaatggaggttggacactttataagtgagaggatccataa 2323691  T
Q  386 attcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggtt 441  Q
    |  |||||||||||| |||| ||||||||||||||||||||||||||||| |||||    
T  2323692 a-ccaatgccttaaggttttaggttaagatgtggtgtccaactcacttgtatggtt 2323746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 678 - 848
Target Start/End: Original strand, 2344242 - 2344412
Alignment:
Q  678 ttgtgtgcaggggggattttaaattgaacaattttgaagatggagttttgtcatctgcttttatggttggacttctcgtggcttctccaatatttgcctc 777  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||||||||||| ||    
T  2344242 ttgtctgcaggggggattttaagttgaacaattttgaagatggtgttttatcatctgattttatggttggacttctcatggcttctccaatatttgcgtc 2344341  T
Q  778 tctagctcagaggtaattacaataaccattcatgttccaatcaatatgaaacctattcttattattagata 848  Q
    ||||||| |||||||||||  ||| |||||| |||| |||||| | |||||||||||| || |||||||||    
T  2344342 tctagctaagaggtaattaggatagccattcgtgttgcaatcagtttgaaacctattcatactattagata 2344412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 13 - 178
Target Start/End: Original strand, 2313595 - 2313751
Alignment:
Q  13 tacaggaatacagtaagatataatgcaattaacgccttcttttctca-aacaagaaatcaagaacatagggtgttgtcatggtttagtaaaaaggcttta 111  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| ||| |||||||||||||||||           ||||||||||| ||||||| ||||    
T  2313595 tacaggaatacagtaagatataatgcaattaacaccttcctttttcagaacaagaaatcaagaac-----------tcatggtttagaaaaaaggtttta 2313683  T
Q  112 cctttagaattga-tgagaaatgaaaaagcactcatgcaagatatccttaaattattgcaataaggga 178  Q
    |||||| |||| | ||  |||||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  2313684 cctttaaaattcaatgccaaatgaaaaagcactcgtgcaagatatcctaaaattattgcaacaaggga 2313751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 341 - 447
Target Start/End: Original strand, 30313209 - 30313314
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga-tgtggtgtccaactcacttgtgtgg 439  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||| ||||| ||||| |||   |||||||||||||    
T  30313209 tagaaaagtggaggttgaacactt-ataagtgagaggacccaaaaactcattgccttaagattttggg-taagagtgtggcgtctctctcacttgtgtgg 30313306  T
Q  440 ttgctctg 447  Q
    ||||||||    
T  30313307 ttgctctg 30313314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 39693911 - 39693990
Alignment:
Q  363 tttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgctctga 448  Q
    ||||||||||||||    |||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  39693911 tttataagtgagag----cataaactcaatgccttaagattttgggttaagatgtggtgtccaactcact--tgtggttgctctga 39693990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 302 - 370
Target Start/End: Complemental strand, 13154547 - 13154479
Alignment:
Q  302 tgttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataag 370  Q
    |||||||| ||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  13154547 tgttgtgtagcaagtatgagttagaagtctcacattgcttagaaaagtggaggttgaacactttataag 13154479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 33561578 - 33561510
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||| ||||||||    
T  33561578 tagaaaagtggaggttaaacactttataagtgagaggacccataaactcattgtcttaaggttttgggt 33561510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 302 - 408
Target Start/End: Original strand, 31385729 - 31385835
Alignment:
Q  302 tgttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaaga 401  Q
    |||||||| ||| ||||||||||||||| | | || | |||||||| |||||||||| ||| |||||||||| ||||||||||||  || |||||||||     
T  31385729 tgttgtgtagcaagtgtgagttagaagtctgacatcggttagaaaaatggaggttgagcaccttataagtgaaaggacccataaacccattgccttaagg 31385828  T
Q  402 ttttggg 408  Q
    |||||||    
T  31385829 ttttggg 31385835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 30323495 - 30323563
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||||| ||| ||||||||| ||||||||    
T  30323495 tagaaaattggaggttgaacactttagaagtgagaggacctataaactcattgccttaaggttttgggt 30323563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 341 - 447
Target Start/End: Complemental strand, 29873664 - 29873558
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga-tgtggtgtccaactcacttgtgtgg 439  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||| ||| ||||||||| ||||| | ||||| ||||  |||   |||||||||||||    
T  29873664 tagaaaagtggaggttgaacattttataagtgggaggactcataaactcattgccttaaggttttgag-taagagtgtgacgtctctctcacttgtgtgg 29873566  T
Q  440 ttgctctg 447  Q
    ||||||||    
T  29873565 ttgctctg 29873558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 33599711 - 33599616
Alignment:
Q  317 gtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaa 412  Q
    |||||| |||||||||| |||| ||||||||||| |||||||  | | ||||| ||||||||||||||||||| ||| |||||| || ||||||||    
T  33599711 gtgagtaagaagtttcacattgtttagaaaagtgaaggttgagaaatatataaatgagaggacccataaattcgatgtcttaaggttatgggttaa 33599616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 315 - 438
Target Start/End: Original strand, 13766789 - 13766914
Alignment:
Q  315 gtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttat--aagtgagaggacccataaattcaatgccttaagattttgggttaa 412  Q
    ||||||||||||||| | | |||| |||||||||||||||||||  | |||||  |||||||| |||  ||||| |||||| |||||| ||||| |||||    
T  13766789 gtgtgagttagaagtctaacattgtttagaaaagtggaggttgattattttataaaagtgagatgactaataaactcaatgacttaaggttttgtgttaa 13766888  T
Q  413 gatgtggtgtccaactcacttgtgtg 438  Q
     |||||||||| |||||  |||||||    
T  13766889 aatgtggtgtctaactcttttgtgtg 13766914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 29874150 - 29874084
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    ||||||||||||||||||||||||||||| || |||||||||||||  || ||||||||| ||||||    
T  29874150 tagaaaagtggaggttgaacactttataattgggaggacccataaacccattgccttaaggttttgg 29874084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 33953898 - 33953853
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaa 386  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  33953898 tagaaaagtggaggttgaacactatataagtgagaggacccataaa 33953853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 25390061 - 25389983
Alignment:
Q  302 tgttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacc 380  Q
    |||||||| ||| || |||||||||| | ||| ||||||||||||| |||||||| ||||||| |||||||||| ||||    
T  25390061 tgttgtgtagcaagtttgagttagaaatctcacattgcttagaaaaatggaggtttaacacttaataagtgagaagacc 25389983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 341 - 406
Target Start/End: Complemental strand, 3594305 - 3594240
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttg 406  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||  || ||| |||||||||||    
T  3594305 tagaaaagtggaggtcgaacactttataagtgataggatccataaacacattgctttaagattttg 3594240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 316 - 412
Target Start/End: Original strand, 18012501 - 18012595
Alignment:
Q  316 tgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaa 412  Q
    ||||||||| |||||||| |||| ||| |||| ||||  |||||||||  |||| ||||||| ||||||| |||| | |||||||||||||||||||    
T  18012501 tgtgagttataagtttcacattgtttaaaaaattggacattgaacact--ataaatgagagggcccataatttcattaccttaagattttgggttaa 18012595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 28531430 - 28531373
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||| |||||||| ||| ||||||||||||||||||    
T  28531430 aggttgaacaccttataagtaagaggtcccataaactcattgccttaagattttgggt 28531373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 37105966 - 37106023
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| || ||||||||||| ||| ||||||||||||||||||    
T  37105966 aggttgaacaccttataagtaaggggacccataaactcattgccttaagattttgggt 37106023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 41678494 - 41678449
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaa 386  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||    
T  41678494 tagaaaaggggaggttaaacactttataagtgagaggacccataaa 41678449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 962629 - 962697
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||  ||||||||||| |||||||||||||||||||||||  || || |||||| ||||||||    
T  962629 tagaaaagtaaaggttgaacaccttataagtgagaggacccataaacccattgtcttaaggttttgggt 962697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 28254364 - 28254296
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||  ||||||||||  |||||||| |||||||||||||| ||| ||||||||| ||||||||    
T  28254364 tagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgccttaaggttttgggt 28254296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 42514680 - 42514748
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||  ||||||||||| |||||||| ||||||||||||||  ||  |||||||||||||||||    
T  42514680 tagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccatcgccttaagattttgggt 42514748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 311 - 374
Target Start/End: Complemental strand, 20062525 - 20062462
Alignment:
Q  311 gcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgag 374  Q
    |||||||||||||| |||| ||| ||||||||| ||| ||||  ||||||||||||||||||||    
T  20062525 gcatgtgtgagttacaagtatcacattgcttagtaaaatggaatttgaacactttataagtgag 20062462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 354 - 409
Target Start/End: Complemental strand, 36005994 - 36005939
Alignment:
Q  354 gttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||| |||||||| |||||||||||||| ||| ||||||||| ||||||||    
T  36005994 gttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggt 36005939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 2803313 - 2803199
Alignment:
Q  321 gttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggt 420  Q
    |||| |||| ||| |||| ||| | |||||||||||||||| | |||||  |||| |||||||||| | |||| |||||  |||||||| ||  |||| |    
T  2803313 gttaaaagtctcacattgtttaaagaagtggaggttgaacattctataaaagagatgacccataaacttaatgtcttaacgttttgggtaaaagtgtgat 2803214  T
Q  421 gtccaactcacttgt 435  Q
    |||||||||||||||    
T  2803213 gtccaactcacttgt 2803199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 14745783 - 14745726
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  14745783 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 14745726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 15511611 - 15511554
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || || |||||||||||||||    
T  15511611 aggttgaacacgttataagtaagaggacccataaacccattgtcttaagattttgggt 15511554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 15880305 - 15880362
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  15880305 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 15880362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 409
Target Start/End: Original strand, 30312823 - 30312888
Alignment:
Q  344 aaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||||||||||||||||||| | ||| |||||||||| | | | ||||||| ||||||||    
T  30312823 aaaagtggaggttgaacactttataacttagatgacccataaacttatttccttaaggttttgggt 30312888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 36178721 - 36178664
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  36178721 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 36178664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 38796736 - 38796679
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||   ||||||||||| ||||||||    
T  38796736 aggttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggt 38796679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 41283591 - 41283538
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagatttt 405  Q
    ||||||||||| |||||||| |||||||||||||| ||| ||||||||| ||||    
T  41283591 aggttgaacaccttataagtaagaggacccataaactcattgccttaaggtttt 41283538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 379 - 444
Target Start/End: Original strand, 2313878 - 2313945
Alignment:
Q  379 cccataaattcaatgccttaagattttgggttaagatgtggtgtc--caactcacttgtgtggttgct 444  Q
    ||||||||| ||| |||||||||||||  | ||||||||||||||  |||||||||||| ||||||||    
T  2313878 cccataaatccaacgccttaagattttatgctaagatgtggtgtccacaactcacttgtatggttgct 2313945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 365 - 441
Target Start/End: Original strand, 24968021 - 24968096
Alignment:
Q  365 tataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggtt 441  Q
    ||||||||| |  ||||||| ||| |||| |||||| ||| |||| ||||||||||||| |||||||||||||||||    
T  24968021 tataagtgatataacccatatatt-aatgacttaaggtttagggtgaagatgtggtgtcaaactcacttgtgtggtt 24968096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 443
Target Start/End: Complemental strand, 25390420 - 25390293
Alignment:
Q  316 tgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagat 415  Q
    |||||||||||||| ||||  || | |||||||| |||||||  | |||||||| | ||| ||||||||||   | || |||||| ||||||||  |  |    
T  25390420 tgtgagttagaagtctcaagatgttcagaaaagtagaggttgggccctttataactaagaagacccataaacctattgtcttaaggttttgggtagaagt 25390321  T
Q  416 gtggtgtccaactcacttgtgtggttgc 443  Q
    |||||||||||||||| |||||| ||||    
T  25390320 gtggtgtccaactcacatgtgtgattgc 25390293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 444
Target Start/End: Original strand, 45634826 - 45634873
Alignment:
Q  397 taagattttgggttaagatgtggtgtccaactcacttgtgtggttgct 444  Q
    |||| |||||||||||||||||||||| ||| ||||||||| ||||||    
T  45634826 taaggttttgggttaagatgtggtgtctaacacacttgtgttgttgct 45634873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 344 - 425
Target Start/End: Original strand, 37842551 - 37842633
Alignment:
Q  344 aaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaa-gattttgggttaagatgtggtgtcca 425  Q
    |||||| ||||||||||| |  |||||||||||||| |||||| |||||| ||||| | |||||||| | ||||| |||||||    
T  37842551 aaaagtagaggttgaacaatgcataagtgagaggacacataaactcaatgtcttaatggttttgggtaatgatgttgtgtcca 37842633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 5543114 - 5543057
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| |||||| |||||||   | ||||||||||||||||||    
T  5543114 aggttgaacaccttataagtaagaggatccataaacctattgccttaagattttgggt 5543057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 6421427 - 6421484
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||| |||||| ||| |||||| || ||||||||    
T  6421427 aggttgaacaccttataagtaagaggactcataaactcattgccttgaggttttgggt 6421484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 341 - 442
Target Start/End: Original strand, 7598259 - 7598360
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggt 440  Q
    |||||||||  ||||| ||||| |||||| | |||||||||||||| |||  |||||||| |||||||| |  || |||||||   |||||||||| |||    
T  7598259 tagaaaagtaaaggttcaacaccttataaataagaggacccataaactcatagccttaaggttttgggtaagaatatggtgtctctctcacttgtgcggt 7598358  T
Q  441 tg 442  Q
    ||    
T  7598359 tg 7598360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 301 - 446
Target Start/End: Complemental strand, 18204550 - 18204406
Alignment:
Q  301 gtgttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaag 400  Q
    ||||||||| ||| |||||||||||||||  ||| | | ||||||||| |||| |||| || || |||| ||| |||||||||||| ||| ||  ||||     
T  18204550 gtgttgtgt-gcaagtgtgagttagaagtcccaagtcggttagaaaagcggagattgagcatttaataaatgaaaggacccataaactcattgttttaat 18204452  T
Q  401 attttgggttaagatgtggtgtccaactcacttgtgtggttgctct 446  Q
     |||| ||| || ||||||||||   |||| |||||| ||||||||    
T  18204451 gttttaggtaaaaatgtggtgtctctctcatttgtgttgttgctct 18204406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 28254239 - 28254194
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaa 386  Q
    |||||||||  |||||||||||||||||||| ||||||| ||||||    
T  28254239 tagaaaagtaaaggttgaacactttataagtaagaggactcataaa 28254194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 36178287 - 36178230
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| || | |||||||||  || ||||||||||||||||||    
T  36178287 aggttgaacaccttataagtaagggaacccataaacccattgccttaagattttgggt 36178230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 37106230 - 37106287
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || | ||||||| ||||||||    
T  37106230 aggttgaacaccttataagtaagaggacccataaacccatttccttaaggttttgggt 37106287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 4e-47; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 302 - 446
Target Start/End: Original strand, 40991745 - 40991889
Alignment:
Q  302 tgttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaaga 401  Q
    |||||||| | | |||||||||||||||  || |||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||     
T  40991745 tgttgtgtaggaagtgtgagttagaagtcccacattgcttagaaaagtggaggttgaacacttcataagtgagaggacccataaacccaatgcctcaagg 40991844  T
Q  402 ttttgggttaagatgtggtgtccaactcacttgtgtggttgctct 446  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  40991845 ttttgggttaagatgtggtgtccaactcacctgtgtggttgctct 40991889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 368 - 446
Target Start/End: Original strand, 11442911 - 11442990
Alignment:
Q  368 aagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaa-ctcacttgtgtggttgctct 446  Q
    ||||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||| ||||||||||||||||||||    
T  11442911 aagtgagaggacccataaactcaatgccttaaggttttgggtgaatatgtggtgtccaatctcacttgtgtggttgctct 11442990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 4154407 - 4154340
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||| |||||||||    
T  4154407 tagaaaagtggaggttgaacactttataagtgaga-gacccataaactcattgccttaatattttgggt 4154340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 4154793 - 4154725
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||  ||| ||||||||    
T  4154793 tagaaaagtggaggttgaacactttataagtgaaaggacccataaactcattgccccaaggttttgggt 4154725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 341 - 405
Target Start/End: Complemental strand, 9620803 - 9620739
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagatttt 405  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  9620803 tagaaaagtagaagttgatcactttataagtgagaggacccataaactcattgccttaagatttt 9620739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 371 - 483
Target Start/End: Complemental strand, 30737715 - 30737602
Alignment:
Q  371 tgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgctctgaacccagtgtcgatgatcaccag 470  Q
    ||||||||||||||||  ||||| | |||| |||||||||||  || ||||||||||||| |||| |||||||||| | |||| ||| ||||||| ||||    
T  30737715 tgagaggacccataaacccaatgtcataaggttttgggttaaagtgcggtgtccaactcaattgtatggttgctctaatcccaatgtagatgatccccag 30737616  T
Q  471 a-ctcccctcgtga 483  Q
    | |||||| |||||    
T  30737615 agctccccacgtga 30737602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 45122026 - 45121969
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||    
T  45122026 aggttgaacactttataagtaagaggactcataaactcattgccttaagattttgggt 45121969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 386
Target Start/End: Original strand, 5172870 - 5172954
Alignment:
Q  302 tgttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaa 386  Q
    |||||||| ||| |||||||||||||||   | |||||||||||||||| ||||||||||||| |||| || || ||||||||||    
T  5172870 tgttgtgtagcaagtgtgagttagaagtcatatattgcttagaaaagtgaaggttgaacacttcataaatgggaagacccataaa 5172954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 344 - 442
Target Start/End: Complemental strand, 7480322 - 7480224
Alignment:
Q  344 aaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttg 442  Q
    ||||||||||||| |||||||||||| | |||  ||| | ||||  ||||||||||| |||| |||  |||||||||||||||||||||| ||| ||||    
T  7480322 aaaagtggaggtttaacactttataaataagaaaacctacaaatctaatgccttaaggttttaggtacagatgtggtgtccaactcacttatgttgttg 7480224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 340 - 386
Target Start/End: Complemental strand, 34219261 - 34219215
Alignment:
Q  340 ttagaaaagtggaggttgaacactttataagtgagaggacccataaa 386  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  34219261 ttagaaaagtggaggttgaacactttataagagagaggatccataaa 34219215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 11970313 - 11970373
Alignment:
Q  381 cataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttg 442  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||||| ||||| |||||||    
T  11970313 cataaactcaatgcctttagattttgggttaagatgtggtgcccaact-acttgcgtggttg 11970373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 315 - 407
Target Start/End: Original strand, 4715281 - 4715373
Alignment:
Q  315 gtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    ||||||||||||||| |   |||| | |||||||||||||||||||||||||||| ||||| || | ||||| ||| |  |||||||||||||    
T  4715281 gtgtgagttagaagtcttgcattgttaagaaaagtggaggttgaacactttataaatgagacgatctataaactcattatcttaagattttgg 4715373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 5274816 - 5274871
Alignment:
Q  351 gaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttg 406  Q
    ||||||||||||||||||| || || |||||||||| ||| |||||||||||||||    
T  5274816 gaggttgaacactttataaatgggaagacccataaaatcattgccttaagattttg 5274871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 3038406 - 3038349
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||||||||||||| | ||||||||||||  || ||||||||| ||||||||    
T  3038406 aggttgaacactttataagtaaaaggacccataaacccattgccttaaggttttgggt 3038349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 3669729 - 3669786
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||| |||||| ||| ||||||||| ||||||||    
T  3669729 aggttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggt 3669786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 365 - 438
Target Start/End: Original strand, 5870399 - 5870472
Alignment:
Q  365 tataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtg 438  Q
    |||||||||||| ||||||||| |||||  ||||| |||||| |||| |||||||| ||||||| | |||||||    
T  5870399 tataagtgagagaacccataaactcaatatcttaaaattttgagttatgatgtggtatccaacttatttgtgtg 5870472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 419
Target Start/End: Complemental strand, 6104679 - 6104582
Alignment:
Q  322 ttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtgg 419  Q
    ||||| ||||||||||| || |||||||| ||| |||  | |||||||||||||  ||||||||| ||||| ||||||| ||||  || |||||||||    
T  6104679 ttagatgtttcaaattgtttggaaaagtgaaggatgattaatttataagtgagaatacccataaactcaataccttaaggttttaagtaaagatgtgg 6104582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 409
Target Start/End: Complemental strand, 33113471 - 33113426
Alignment:
Q  364 ttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||    
T  33113471 ttataagtaagaggacccataaactcattgccttaagattttgggt 33113426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 34835251 - 34835308
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| |||||||||||||| ||| ||||||||  ||||||||    
T  34835251 aggttgaacaccttataagtaagaggacccataaactcattgccttaaagttttgggt 34835308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 45122666 - 45122723
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| |||||||||||||| ||| || |||||| ||||||||    
T  45122666 aggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggt 45122723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 354 - 414
Target Start/End: Complemental strand, 25561930 - 25561870
Alignment:
Q  354 gttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga 414  Q
    ||||||||| |||||||| |||||||||||||| ||| || |||||| ||||||| |||||    
T  25561930 gttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttggggtaaga 25561870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 40518613 - 40518681
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||  ||||||||||| |||||| | ||||||||||||||  ||||| |||||| ||||||||    
T  40518613 tagaaaagtaaaggttgaacaccttataaataagaggacccataaacccaatgacttaaggttttgggt 40518681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 407
Target Start/End: Complemental strand, 20870689 - 20870634
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    ||||||||||  |||||||| ||||||||||||||  || ||||||||||||||||    
T  20870689 aggttgaacatcttataagtaagaggacccataaacccactgccttaagattttgg 20870634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 352 - 386
Target Start/End: Complemental strand, 8918880 - 8918846
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaa 386  Q
    |||||||||||||||||||| ||||||||||||||    
T  8918880 aggttgaacactttataagtaagaggacccataaa 8918846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 352 - 406
Target Start/End: Complemental strand, 9482720 - 9482666
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttg 406  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||| |||||||||    
T  9482720 aggttgaacaccttataagtaagaggacccataaacccattgcctaaagattttg 9482666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 365 - 423
Target Start/End: Complemental strand, 35224779 - 35224721
Alignment:
Q  365 tataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtc 423  Q
    ||||| ||||| ||| ||||||   |||||||||||||||||||| |||||||||||||    
T  35224779 tataactgagatgacgcataaacataatgccttaagattttgggtgaagatgtggtgtc 35224721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 9483303 - 9483246
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || || |||||| ||||||||    
T  9483303 aggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggt 9483246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 18372110 - 18372053
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| |||||| ||||||| ||| ||| ||||| ||||||||    
T  18372110 aggttgaacaccttataagtaagaggatccataaactcattgctttaaggttttgggt 18372053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 34835517 - 34835574
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||| ||||| |||||||| |||||||||||||| ||| ||||||||  ||||||||    
T  34835517 aggtttaacaccttataagtaagaggacccataaactcattgccttaaagttttgggt 34835574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 34835783 - 34835840
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||| ||||| |||||||| |||||||||||||| ||| ||||||||  ||||||||    
T  34835783 aggtttaacaccttataagtaagaggacccataaactcattgccttaaagttttgggt 34835840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 340 - 369
Target Start/End: Complemental strand, 40417647 - 40417618
Alignment:
Q  340 ttagaaaagtggaggttgaacactttataa 369  Q
    ||||||||||||||||||||||||||||||    
T  40417647 ttagaaaagtggaggttgaacactttataa 40417618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 341 - 446
Target Start/End: Complemental strand, 40417843 - 40417738
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggt 440  Q
    |||||||  |||||||| | ||||||||||| ||| ||| | ||||| || ||| |||||||||||| | ||  |||||||||   |||||||||||| |    
T  40417843 tagaaaaaaggaggttggatactttataagtaagatgactcgtaaatccattgcgttaagattttggataaaagtgtggtgtctctctcacttgtgtgat 40417744  T
Q  441 tgctct 446  Q
    ||||||    
T  40417743 tgctct 40417738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 40518113 - 40518170
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| |  |||||||||||  |||||||||||| ||||||||    
T  40518113 aggttgaacaccttataagtaaatggacccataaacccaatgccttaaggttttgggt 40518170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 41972189 - 41972234
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaa 386  Q
    |||||||||  ||||||||||| |||||||||| ||||||||||||    
T  41972189 tagaaaagtaaaggttgaacaccttataagtgataggacccataaa 41972234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 8e-33; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 318 - 446
Target Start/End: Original strand, 29802549 - 29802677
Alignment:
Q  318 tgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgt 417  Q
    |||||||||||| ||| |||||||   |||||||||||||| ||||| | || ||||||||||||||||  |||||||||||| ||||| |||||||| |    
T  29802549 tgagttagaagtctcacattgcttgataaagtggaggttgagcacttgacaactgagaggacccataaacccaatgccttaaggttttgtgttaagatat 29802648  T
Q  418 ggtgtccaactcacttgtgtggttgctct 446  Q
    |||||||||||||||||||||||||||||    
T  29802649 ggtgtccaactcacttgtgtggttgctct 29802677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 301 - 444
Target Start/End: Complemental strand, 41603356 - 41603213
Alignment:
Q  301 gtgttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaag 400  Q
    ||||||||| |||  ||||||||||||||  ||  |||||| |||||||||||||||| |||||||||||||||| ||||||||||   | || ||||||    
T  41603356 gtgttgtgtagcaaatgtgagttagaagtcccacgttgcttggaaaagtggaggttgagcactttataagtgagaagacccataaacatagtgtcttaag 41603257  T
Q  401 attttgggttaagatgtggtgtccaactcacttgtgtggttgct 444  Q
     |||||||| ||||| |||||| ||| |||||||| ||||||||    
T  41603256 gttttgggtaaagatttggtgtacaattcacttgtatggttgct 41603213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 686 - 780
Target Start/End: Complemental strand, 36799418 - 36799324
Alignment:
Q  686 aggggggattttaaattgaacaattttgaagatggagttttgtcatctgcttttatggttggacttctcgtggcttctccaatatttgcctctct 780  Q
    |||||||||||||| |||| ||||||| ||||||||||| | ||||||||||||||||||||||||||  | ||||||||||||||||| |||||    
T  36799418 aggggggattttaacttgaccaattttcaagatggagttctttcatctgcttttatggttggacttcttatagcttctccaatatttgcatctct 36799324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 366 - 446
Target Start/End: Original strand, 2041137 - 2041217
Alignment:
Q  366 ataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgctct 446  Q
    |||||||||| ||||| ||||| || ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  2041137 ataagtgagatgacccgtaaatccattgccttaaggttttgggtgaagatgtggtgtccaactcacttgtgtggttgctct 2041217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 7147805 - 7147702
Alignment:
Q  302 tgttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaaga 401  Q
    |||||||  ||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||| ||||||     
T  7147805 tgttgtgcagcaagtgtgagttagaagtctcacattgcttagaaaagtggaggttgaacacttt-taagtgagaggacccgtaaacccaatgtcttaagg 7147707  T
Q  402 ttttg 406  Q
    |||||    
T  7147706 ttttg 7147702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 354 - 446
Target Start/End: Original strand, 31957544 - 31957636
Alignment:
Q  354 gttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgctct 446  Q
    |||||||| | |||||||||||| | |||||||   ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  31957544 gttgaacaatatataagtgagagaatccataaacaaaatgccttaaggttttgggttaagatgtggtgtccaactcacttgcgtggttgctct 31957636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 316 - 465
Target Start/End: Original strand, 23630310 - 23630459
Alignment:
Q  316 tgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagat 415  Q
    ||||||||||||||   | |||||||| ||||||| | |||||||||||||||||||||| ||| |||||| |||| | ||||||| ||||||| ||  |    
T  23630310 tgtgagttagaagtactacattgcttacaaaagtgaaagttgaacactttataagtgagacgactcataaactcaacgtcttaagactttgggtaaaagt 23630409  T
Q  416 gtggtgtccaactcacttgtgtggttgctctgaacccagtgtcgatgatc 465  Q
    ||| | |||  |||||||||||| |||||||| | ||| ||| |||||||    
T  23630410 gtgatttccctctcacttgtgtgcttgctctgcatccaatgtggatgatc 23630459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 315 - 446
Target Start/End: Complemental strand, 37660960 - 37660829
Alignment:
Q  315 gtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga 414  Q
    |||||||||||||||  ||||||||||  ||||||| ||||||||||   |||||||||||||||| |||||| |||  |  |||| |||||| |||| |    
T  37660960 gtgtgagttagaagtcccaaattgcttgaaaaagtgaaggttgaacaacatataagtgagaggaccaataaatccaactctataaggttttggattaata 37660861  T
Q  415 tgtggtgtccaactcacttgtgtggttgctct 446  Q
    | |||||| ||||||||||||| |||| ||||    
T  37660860 tatggtgttcaactcacttgtgcggttactct 37660829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 341 - 446
Target Start/End: Complemental strand, 15841493 - 15841388
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga-tgtggtgtccaactcacttgtgtgg 439  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||||  || ||||||||| ||||||| ||||| |||| ||||   |||||||||||||    
T  15841493 tagaaaagtggaggttgaacactttgtaagtgagaggattcataaacacattgccttaaggttttggg-taagagtgtgatgtctctctcacttgtgtgg 15841395  T
Q  440 ttgctct 446  Q
    |||||||    
T  15841394 ttgctct 15841388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 341 - 446
Target Start/End: Original strand, 760220 - 760324
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggt 440  Q
    ||||||| || |||||||  |||||||||||||||||||||||||| ||| |||||||||||||| ||| ||  |||||||||   |||| |||||||||    
T  760220 tagaaaaatgaaggttgagaactttataagtgagaggacccataaactcattgccttaagatttt-ggtaaaagtgtggtgtctctctcatttgtgtggt 760318  T
Q  441 tgctct 446  Q
    ||||||    
T  760319 tgctct 760324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 377 - 446
Target Start/End: Original strand, 30788285 - 30788354
Alignment:
Q  377 gacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgctct 446  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||| ||| |||||||||||    
T  30788285 gacccataaatccaatgtcttaaggttttgggttaagatgtggtgttcaactcaattgagtggttgctct 30788354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 341 - 414
Target Start/End: Original strand, 34544137 - 34544210
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga 414  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| ||| ||||||||| |||| || |||||    
T  34544137 tagaaaagtggaggttgatcactttataaatgagaggacccataaactcattgccttaaggtttttgggtaaga 34544210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 464
Target Start/End: Complemental strand, 53667443 - 53667333
Alignment:
Q  354 gttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgctctgaaccca 453  Q
    |||||| | ||||||||||| | ||||||||||| |||||| ||||| |||| |||| |  ||||||||| |||||||||| || |||||||||| ||||    
T  53667443 gttgaatattttataagtgacaagacccataaatccaatgcattaaggttttaggttgaagtgtggtgtctaactcacttgcgttgttgctctgagccca 53667344  T
Q  454 gtgtcgatgat 464  Q
     ||| ||||||    
T  53667343 atgtggatgat 53667333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 28034260 - 28034305
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaa 386  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  28034260 tagaaaagtggaggttgaacactttataagtgagagaacccataaa 28034305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 390 - 446
Target Start/End: Original strand, 31894663 - 31894719
Alignment:
Q  390 aatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgctct 446  Q
    ||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||||    
T  31894663 aatgccttaagtttttaggttaagatgttgtgtccaattcacttgtgtggttgctct 31894719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 343 - 446
Target Start/End: Complemental strand, 10452438 - 10452335
Alignment:
Q  343 gaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttg 442  Q
    ||||| |||| ||| |||||| |||||  ||||||||||||||| |  |||||||||  ||||  ||||| ||||||||| |||||||||||| ||||||    
T  10452438 gaaaaatggatgtttaacactatataaaagagaggacccataaacttcatgccttaaagtttttagttaaaatgtggtgttcaactcacttgtatggttg 10452339  T
Q  443 ctct 446  Q
    ||||    
T  10452338 ctct 10452335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 347 - 398
Target Start/End: Complemental strand, 11348447 - 11348396
Alignment:
Q  347 agtggaggttgaacactttataagtgagaggacccataaattcaatgcctta 398  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  11348447 agtggaggttgaacactttataagtgagaggatccatatattcattgcctta 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 365 - 436
Target Start/End: Original strand, 9965910 - 9965980
Alignment:
Q  365 tataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtg 436  Q
    |||| |||||||||  |||||||||||||  |||||||||||  || |||||||||||||||||||||||||    
T  9965910 tatatgtgagaggatacataaattcaatggattaagattttgt-ttgagatgtggtgtccaactcacttgtg 9965980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 441
Target Start/End: Complemental strand, 23210916 - 23210821
Alignment:
Q  344 aaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggtt 441  Q
    |||| |||| |||||||||| ||||||| | | ||||| ||| | ||||| |||||||||| || |||||||||| |||||||||||||||| |||||    
T  23210916 aaaaatggatgttgaacactatataagttataagacccgtaact-caatgtcttaagatttagg-ttaagatgtgatgtccaactcacttgtatggtt 23210821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 36572063 - 36572120
Alignment:
Q  354 gttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggtta 411  Q
    ||||||||| |||||||| ||| ||||||||||| || ||||||||| ||||||||||    
T  36572063 gttgaacaccttataagtaagaagacccataaatccattgccttaaggttttgggtta 36572120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 43119491 - 43119434
Alignment:
Q  335 attgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaat 392  Q
    ||||||||||||| |||| |||||||||||||||| ||| | ||| ||||||||||||    
T  43119491 attgcttagaaaattggatgttgaacactttataaatgaaaagactcataaattcaat 43119434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 49880202 - 49880259
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  49880202 aggttgaacaccttataagtaagaggacccataaacccactgccttaaggttttgggt 49880259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 50002468 - 50002525
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||||||| ||||| ||||||||||||||| || || |||||| ||||||||    
T  50002468 aggttgaacactttttaagtaagaggacccataaatccattgtcttaaggttttgggt 50002525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 50630869 - 50630812
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  50630869 aggttgaacacattataagtaagaggacccataaacccattgccttaaggttttgggt 50630812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 18975927 - 18975836
Alignment:
Q  344 aaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtg 436  Q
    |||||||||||||||||||||||||| ||||| || | ||||||||||   | ||||||||||| | || |||||||||  |||||| |||||    
T  18975927 aaaagtggaggttgaacactttataaatgagatgatctataaattcaa-cacgtaagattttggataaatatgtggtgtttaactcaattgtg 18975836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 315 - 446
Target Start/End: Original strand, 30249707 - 30249839
Alignment:
Q  315 gtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgcctt-aagattttgggttaag 413  Q
    |||| ||||||||||| || |||||||| | || ||||||||| | | ||||||||| |||  || || ||| ||| || ||| ||| |||||||||||     
T  30249707 gtgtaagttagaagttccacattgcttaaataattggaggttggatattttataagttagataactcaaaaactcattgtctttaaggttttgggttaaa 30249806  T
Q  414 atgtggtgtccaactcacttgtgtggttgctct 446  Q
      ||| ||||||| |||||||||||||||||||    
T  30249807 gagtgatgtccaaatcacttgtgtggttgctct 30249839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 36629268 - 36629336
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||  | ||| ||||| |||||||| |||||||||||||| ||| ||||||||| ||||||||    
T  36629268 tagaaaagtaaaagttaaacaccttataagtaagaggacccataaactcattgccttaaggttttgggt 36629336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 52884929 - 52885001
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaag-atgtggtgtc 423  Q
    ||||||||||| |||||||| |||||| |||||||  || ||||||||| ||||||| |||| ||||||||||    
T  52884929 aggttgaacaccttataagtaagaggatccataaacccattgccttaaggttttggggtaagaatgtggtgtc 52885001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 355 - 438
Target Start/End: Original strand, 18637151 - 18637234
Alignment:
Q  355 ttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtg 438  Q
    ||||||| | |||||||||||| || |||||||   |||  ||||||||||||||||||||||  ||| ||| |||||||||||    
T  18637151 ttgaacaatgtataagtgagagaactcataaatctgatgtattaagattttgggttaagatgtaatgttcaagtcacttgtgtg 18637234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 411 - 446
Target Start/End: Original strand, 19958056 - 19958091
Alignment:
Q  411 aagatgtggtgtccaactcacttgtgtggttgctct 446  Q
    ||||||||||||||||||||| ||||||||||||||    
T  19958056 aagatgtggtgtccaactcacatgtgtggttgctct 19958091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 22028075 - 22028004
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtc 423  Q
    ||||||||||| |||||||| ||||||||||||||   | ||||||||| |||||||| |  ||||||||||    
T  22028075 aggttgaacaccttataagtaagaggacccataaacatattgccttaaggttttgggtaagaatgtggtgtc 22028004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 386
Target Start/End: Original strand, 44620701 - 44620736
Alignment:
Q  351 gaggttgaacactttataagtgagaggacccataaa 386  Q
    ||||||||||||||||||||| ||||||||||||||    
T  44620701 gaggttgaacactttataagtaagaggacccataaa 44620736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 371
Target Start/End: Original strand, 53203749 - 53203796
Alignment:
Q  324 agaagtttcaaattgcttagaaaagtggaggttgaacactttataagt 371  Q
    ||||||| || |||||||||||||||||||||| |||| |||||||||    
T  53203749 agaagttacacattgcttagaaaagtggaggttaaacattttataagt 53203796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 23556991 - 23556933
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaa 399  Q
    ||||||||||||||||||||| ||||||| | |||| | ||||||| ||| ||||||||    
T  23556991 tagaaaagtggaggttgaacattttataaataagagaatccataaaatcattgccttaa 23556933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 2741113 - 2741170
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||| || |||||||| ||||||||||||| | || ||||||||| ||||||||    
T  2741113 aggttgaataccttataagtaagaggacccataactccattgccttaaggttttgggt 2741170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 3340849 - 3340906
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||| ||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  3340849 aggttgagcaccttataagtaagaggacccataaacccactgccttaaggttttgggt 3340906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 3341170 - 3341227
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||| |||||||||||||| |||||||||||||  ||| ||  ||||||||||||||    
T  3341170 aggttaaacactttataagtaagaggacccataacatcattgttttaagattttgggt 3341227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 4955431 - 4955374
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||| ||||||  || ||||||||| ||||||||    
T  4955431 aggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggt 4955374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 302 - 363
Target Start/End: Complemental strand, 10370169 - 10370108
Alignment:
Q  302 tgttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacact 363  Q
    |||||||| ||| |||||||||||||||| || || | ||||||| |||||||||| |||||    
T  10370169 tgttgtgtagcaagtgtgagttagaagttccacatcggttagaaacgtggaggttggacact 10370108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 15841109 - 15841072
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagagga 378  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  15841109 tagaaaagtggaggctgaacattttataagtgagagga 15841072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 31249983 - 31249938
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaa 386  Q
    |||||| ||| | |||||||||||||||||| ||||||||||||||    
T  31249983 tagaaaggtgaatgttgaacactttataagttagaggacccataaa 31249938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 364 - 409
Target Start/End: Original strand, 31691206 - 31691251
Alignment:
Q  364 ttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||| |||||||||||||| ||| ||||||||| ||||||||    
T  31691206 ttataagtaagaggacccataaactcattgccttaaggttttgggt 31691251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 39404060 - 39404117
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||||||||||||| ||||||| |||||| |||  || ||||| ||||||||    
T  39404060 aggttgaacactttataagtaagaggactcataaactcatagcattaaggttttgggt 39404117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 45496847 - 45496904
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| |||||||| ||||| ||| || |||||| ||||||||    
T  45496847 aggttgaacaccttataagtaagaggacctataaactcattgtcttaaggttttgggt 45496904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 304 - 433
Target Start/End: Original strand, 45834451 - 45834580
Alignment:
Q  304 ttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagatt 403  Q
    |||||| ||| ||||  |||| |||| ||| |||| |||||||| ||||||||||  | ||||||||||||  |||  ||||  ||  ||||||||||||    
T  45834451 ttgtgtagcaagtgttggttaaaagtctcatattgtttagaaaaatggaggttgattattttataagtgagcagacttataagctcgttgccttaagatt 45834550  T
Q  404 ttgggttaagatgtggtgtccaactcactt 433  Q
     |||||| |  ||||||||| |||||||||    
T  45834551 ctgggttgaagtgtggtgtctaactcactt 45834580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 316 - 429
Target Start/End: Complemental strand, 53204242 - 53204129
Alignment:
Q  316 tgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagat 415  Q
    |||||||||||||| ||| | |  ||||||||| | ||||| |||| ||||||| ||||| ||| ||||||   ||||||||||||| ||  || |||||    
T  53204242 tgtgagttagaagtctcacaatatttagaaaagggaaggttaaacattttataaatgagacgactcataaacctaatgccttaagatgttacgtaaagat 53204143  T
Q  416 gtggtgtccaactc 429  Q
    ||| |||| |||||    
T  53204142 gtgatgtcaaactc 53204129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 54108955 - 54109011
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  54108955 aggttgaacaccttataagtaagaggacccataaacccattgccttaag-ttttgggt 54109011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 54936238 - 54936295
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| || ||||| ||||||||||||||  || ||||||||| ||||||||    
T  54936238 aggttgaacaccttgtaagtaagaggacccataaacccattgccttaaggttttgggt 54936295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 7e-24; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 311 - 444
Target Start/End: Original strand, 41857425 - 41857558
Alignment:
Q  311 gcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggtt 410  Q
    ||||||||||| ||||||||||| |||| | |||||  | |||||| |||| ||||||| ||| |  ||||||||| |||||| |||||  |||||||||    
T  41857425 gcatgtgtgagatagaagtttcacattgttaagaaatatagaggtttaacattttataaatgataacacccataaactcaatgacttaaagttttgggtt 41857524  T
Q  411 aagatgtggtgtccaactcacttgtgtggttgct 444  Q
    |||||||| ||| |||||||||||||||||||||    
T  41857525 aagatgtgatgttcaactcacttgtgtggttgct 41857558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 372 - 446
Target Start/End: Complemental strand, 50329428 - 50329354
Alignment:
Q  372 gagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgctct 446  Q
    |||||||||||||||| |||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||    
T  50329428 gagaggacccataaatccaatgccttaaggttttgggttaagacgtggtgtcaaactcacttgtttggttgctct 50329354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 315 - 412
Target Start/End: Original strand, 2417322 - 2417419
Alignment:
Q  315 gtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaa 412  Q
    ||||||||||||||| ||   |||||||||||||||||| ||||||| |||||||||||||| | | ||||| ||||||| ||||| |||||| ||||    
T  2417322 gtgtgagttagaagtctcttgttgcttagaaaagtggagattgaacattttataagtgagagaatctataaactcaatgctttaaggttttggattaa 2417419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 318 - 442
Target Start/End: Original strand, 32930695 - 32930820
Alignment:
Q  318 tgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgcctta-agattttgggttaagatg 416  Q
    |||||||||||| | | |||| |||||||||| || |||||||| ||||||||||||| ||| |||||| |||||| |||| |||||||| ||| |  ||    
T  32930695 tgagttagaagtcttatattgtttagaaaagtagaagttgaacattttataagtgagatgactcataaactcaatgtcttagagattttgagtttacgtg 32930794  T
Q  417 tggtgtccaactcacttgtgtggttg 442  Q
    |||||| |||||||  ||||||||||    
T  32930795 tggtgttcaactcatatgtgtggttg 32930820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 341 - 445
Target Start/End: Complemental strand, 47964645 - 47964541
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga-tgtggtgtccaactcacttgtgtgg 439  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||   | ||||||||| ||||||| ||||| ||||| |||   |||||||||||||    
T  47964645 tagaaatgtggaggttgaacgctatataagtgagaggacccataaacctattgccttaaggttttggg-taagagtgtggcgtctctctcacttgtgtgg 47964547  T
Q  440 ttgctc 445  Q
    ||||||    
T  47964546 ttgctc 47964541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 444
Target Start/End: Original strand, 33153563 - 33153690
Alignment:
Q  316 tgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagat 415  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||  |||  |  || ||| ||| || ||||| |||||   |||| ||    
T  33153563 tgtgagttagaagtctcatattgctt-gaaaagtggaggttgaacactttataagcaagataattcaaaaactcattgtcttaaaattttaaattaaaat 33153661  T
Q  416 gtggtgtccaactcacttgtgtggttgct 444  Q
     |||| ||||||||||||||||| |||||    
T  33153662 atggtatccaactcacttgtgtgtttgct 33153690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 366 - 446
Target Start/End: Complemental strand, 45717911 - 45717831
Alignment:
Q  366 ataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgctct 446  Q
    |||||||||| || ||||||||  ||||||||| | ||||| || |||||||||||||||||| |||||| ||||||||||    
T  45717911 ataagtgagatgatccataaatcaaatgccttagggttttgagtgaagatgtggtgtccaacttacttgtatggttgctct 45717831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 39336348 - 39336290
Alignment:
Q  349 tggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||| ||||| ||||||    
T  39336348 tggaggttgaacactttataagtgagaggatccataaactcattgctttaaggttttgg 39336290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 376 - 446
Target Start/End: Original strand, 50329645 - 50329715
Alignment:
Q  376 ggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgctct 446  Q
    ||||| |||||| |||||   |||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  50329645 ggaccaataaatccaatgttgtaagcttttgggtgaagatgtggtgtccaacccacttgtgtggttgctct 50329715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 343 - 444
Target Start/End: Original strand, 25317191 - 25317292
Alignment:
Q  343 gaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttg 442  Q
    |||||||||||||||| |||||| ||| |||||||||||||||| |   ||||||||| |||||||| ||  ||| ||||    ||||||||||||||||    
T  25317191 gaaaagtggaggttgagcactttgtaactgagaggacccataaacttgttgccttaaggttttgggtaaaagtgtagtgtgtctctcacttgtgtggttg 25317290  T
Q  443 ct 444  Q
    ||    
T  25317291 ct 25317292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 30399724 - 30399664
Alignment:
Q  318 tgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagagga 378  Q
    ||||||||||||| || |||| ||| |||| ||||||||||||| ||||||||||||||||    
T  30399724 tgagttagaagttccacattgtttaaaaaattggaggttgaacattttataagtgagagga 30399664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 1455001 - 1454938
Alignment:
Q  380 ccataaattcaatgccttaagattttgggttaagatgtggtgtccaa-ctcacttgtgtggttg 442  Q
    |||||||||||||| ||||||||||||||| ||||||| |||| ||| ||||||||||| ||||    
T  1455001 ccataaattcaatgtcttaagattttgggtaaagatgttgtgttcaatctcacttgtgttgttg 1454938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 344 - 446
Target Start/End: Complemental strand, 21868071 - 21867968
Alignment:
Q  344 aaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcac-ttgtgtggttg 442  Q
    |||||| |||||||| ||   |||| ||||||||||||| |||  |||||||||||| |||  | | ||||||||||||||||||||| ||||||| |||    
T  21868071 aaaagtcgaggttgagcaacatataggtgagaggacccacaaagccaatgccttaaggtttgtgatgaagatgtggtgtccaactcactttgtgtgattg 21867972  T
Q  443 ctct 446  Q
    ||||    
T  21867971 ctct 21867968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 348 - 386
Target Start/End: Original strand, 12749207 - 12749245
Alignment:
Q  348 gtggaggttgaacactttataagtgagaggacccataaa 386  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  12749207 gtggaggttgaacactttataagtgtgaggacccataaa 12749245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 39336088 - 39335991
Alignment:
Q  350 ggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga-tgtggtgtccaactcacttgtgtggttgctctg 447  Q
    |||||||||||||||||||| ||| | ||| |||||| ||| ||||||||| ||||||| ||||| |||||||||   ||| |||||||| ||||||||    
T  39336088 ggaggttgaacactttataaatgataagactcataaaatcattgccttaaggttttggg-taagagtgtggtgtctctctcgcttgtgtgattgctctg 39335991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 32589745 - 32589802
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  32589745 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 32589802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 43346907 - 43346850
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| |||| ||||||||| ||| ||||||||| ||||||||    
T  43346907 aggttgaacaccttataagtaagagaacccataaactcattgccttaaggttttgggt 43346850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 12114689 - 12114621
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||  ||||||||||| |||||||| ||||||||||||||  || || |||||| ||||||||    
T  12114689 tagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggt 12114621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 21832470 - 21832402
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||  ||||||||||| |||||||| ||||||| |||||| |||  |||||||| ||||||||    
T  21832470 tagaaaagtaaaggttgaacaccttataagtaagaggactcataaactcatagccttaaggttttgggt 21832402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 47965042 - 47964974
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||||||||| |||| | ||||||||||||| | |||||   || ||||||||||||||||||    
T  47965042 tagaaaagtggaggttaaacattatataagtgagagggctcataagcccattgccttaagattttgggt 47964974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 358 - 409
Target Start/End: Original strand, 4823703 - 4823754
Alignment:
Q  358 aacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||| ||||||||  ||||||||||||| ||| ||||||||||||||||||    
T  4823703 aacaccttataagtaggaggacccataaactcattgccttaagattttgggt 4823754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 35946564 - 35946635
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtc 423  Q
    ||||||||||| |||||||| ||||||||||||||  |  ||||||||| |||||||| ||  |||||||||    
T  35946564 aggttgaacaccttataagtaagaggacccataaacccgttgccttaaggttttgggtaaaagtgtggtgtc 35946635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 46546450 - 46546387
Alignment:
Q  343 gaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttg 406  Q
    |||| |||||||||||||||||||||||| |||| | |||||||  || ||||||||| |||||    
T  46546450 gaaatgtggaggttgaacactttataagttagagaatccataaacccattgccttaaggttttg 46546387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 352 - 442
Target Start/End: Complemental strand, 41359881 - 41359791
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttg 442  Q
    |||||||| || |||||||| ||||||||||||||  || ||||||||| |||||||| |  |||||| |||   ||| ||||||||||||    
T  41359881 aggttgaataccttataagtaagaggacccataaacccattgccttaaggttttgggtaagaatgtggcgtctctctcgcttgtgtggttg 41359791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 3384382 - 3384325
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||| |||||||||||||  |||||||||||||| | ||||||||||  ||||||||    
T  3384382 aggttaaacactttataaggaagaggacccataaacttaatgccttaaagttttgggt 3384325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 354 - 407
Target Start/End: Original strand, 15772898 - 15772951
Alignment:
Q  354 gttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    ||||||||| |||||||| |||||||||||||| ||| ||| ||||| ||||||    
T  15772898 gttgaacaccttataagtaagaggacccataaactcattgctttaaggttttgg 15772951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 22304611 - 22304668
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||| || |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  22304611 aggttgaataccttataagtaagaggacccataaacacattgccttaaggttttgggt 22304668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 351 - 400
Target Start/End: Complemental strand, 26605778 - 26605729
Alignment:
Q  351 gaggttgaacactttataagtgagaggacccataaattcaatgccttaag 400  Q
    |||||||||||   ||||||||||||||| || |||||||||||||||||    
T  26605778 gaggttgaacaacgtataagtgagaggacacaaaaattcaatgccttaag 26605729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 33362409 - 33362352
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||| || |||||||| ||||||||||||||  || | ||||||||||||||||    
T  33362409 aggttgaataccttataagtaagaggacccataaacccatttccttaagattttgggt 33362352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 37991093 - 37991036
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| |||||||| ||||| |||  |||||||| ||||||||    
T  37991093 aggttgaacaccttataagtaagaggacctataaactcatcgccttaaggttttgggt 37991036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 42342504 - 42342447
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||| ||||| |||||||| ||||||||||||||| || || |||||| ||||||||    
T  42342504 aggttcaacaccttataagtaagaggacccataaatccattgtcttaaggttttgggt 42342447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 364 - 409
Target Start/End: Original strand, 52634994 - 52635039
Alignment:
Q  364 ttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||| | |||||||||||||| ||| ||||||||||||||||||    
T  52634994 ttataaataagaggacccataaactcattgccttaagattttgggt 52635039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 3e-23; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 302 - 466
Target Start/End: Complemental strand, 34661775 - 34661611
Alignment:
Q  302 tgttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaaga 401  Q
    |||||||| ||| ||||||||||||| | ||| ||| |||||||||||||||||||| |||||||||||| |||| ||||||| ||  | || ||||||     
T  34661775 tgttgtgtagcaagtgtgagttagaaatctcacattacttagaaaagtggaggttgatcactttataagtaagagaacccatacatatattgtcttaagg 34661676  T
Q  402 ttttgggttaagatgtggtgtccaactcacttgtgtggttgctctgaacccagtgtcgatgatca 466  Q
    ||||  |||||  ||||||| |   ||||||||| ||||||||||||||||| | | ||||||||    
T  34661675 ttttacgttaaagtgtggtggctgtctcacttgtatggttgctctgaacccaatatggatgatca 34661611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 335 - 446
Target Start/End: Complemental strand, 5034954 - 5034843
Alignment:
Q  335 attgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttg 434  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||| || ||||||  ||||| |||||| | || || |||||| ||| |||||||    
T  5034954 attgcttggaaaagtggaggttgaccactttataagtgagatgacccatcaactcaatgttttaaggttttggataaaaatatggtgtacaattcacttg 5034855  T
Q  435 tgtggttgctct 446  Q
    ||||||||||||    
T  5034854 tgtggttgctct 5034843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 341 - 447
Target Start/End: Complemental strand, 12092609 - 12092503
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga-tgtggtgtccaactcacttgtgtgg 439  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| ||| ||||||||| ||||| | ||||| |||||||||   |||||||||| ||    
T  12092609 tagaaaagtggaggttgagcactttataagtgagaggatccataaactcattgccttaaggttttgag-taagactgtggtgtctctctcacttgtgagg 12092511  T
Q  440 ttgctctg 447  Q
    ||||||||    
T  12092510 ttgctctg 12092503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 6071163 - 6071229
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||    
T  6071163 tagaaaagtggaggttgaacactttataagtgagatgatccataaactcattgccttaagattttgg 6071229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 344 - 442
Target Start/End: Original strand, 20848353 - 20848452
Alignment:
Q  344 aaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggtt-aagatgtggtgtccaactcacttgtgtggttg 442  Q
    |||| ||||||||||||| ||||||||| ||||||| ||||||| ||||| ||||||||| ||| || || |||||||||| |||||| |||||||||||    
T  20848353 aaaaatggaggttgaacattttataagtaagaggacgcataaatccaatgtcttaagattctggattaaaaatgtggtgtcaaactcatttgtgtggttg 20848452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 344 - 409
Target Start/End: Original strand, 8481960 - 8482025
Alignment:
Q  344 aaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||||||||||||||||||| ||||| ||| |||||| ||| ||||||||||||||||||    
T  8481960 aaaagtggaggttgaacactttataaatgagatgactcataaactcattgccttaagattttgggt 8482025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 345 - 438
Target Start/End: Complemental strand, 28033328 - 28033236
Alignment:
Q  345 aaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtg 438  Q
    ||||| |||| ||||||||||||||||  || ||||||||||| |||| ||||||||||||||||||||| |  |||||||||| |||||||||    
T  28033328 aaagtagaggctgaacactttataagtacgaagacccataaat-caataccttaagattttgggttaagacgcagtgtccaactaacttgtgtg 28033236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 10074490 - 10074389
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga-tgtggtgtccaactcacttgtgtgg 439  Q
    |||||||||  ||||||||||| |||||||| |||||||||||||| ||| ||||||||| ||||||| ||||| |||||||||   |||||| ||||||    
T  10074490 tagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttggg-taagagtgtggtgtctctctcactagtgtgg 10074392  T
Q  440 ttg 442  Q
    |||    
T  10074391 ttg 10074389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 3409301 - 3409358
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| |||||||||||||| ||| ||||||||| ||||||||    
T  3409301 aggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggt 3409358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 342 - 442
Target Start/End: Complemental strand, 10073742 - 10073642
Alignment:
Q  342 agaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga-tgtggtgtccaactcacttgtgtggt 440  Q
    ||||||||  ||||||||||| |||||||| |||||| ||||||| ||| || |||||||||||||| ||||| |||||||||   |||||| |||||||    
T  10073742 agaaaagtaaaggttgaacaccttataagtaagaggatccataaactcattggcttaagattttggg-taagagtgtggtgtctctctcactagtgtggt 10073644  T
Q  441 tg 442  Q
    ||    
T  10073643 tg 10073642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 358 - 446
Target Start/End: Complemental strand, 5035431 - 5035343
Alignment:
Q  358 aacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgctct 446  Q
    |||| |||||||||||||| | ||| |||| ||||   ||||| |||||| | |||||||||||| |||||||||||||| ||||||||    
T  5035431 aacattttataagtgagagaatccacaaatacaatattttaagtttttggataaagatgtggtgttcaactcacttgtgttgttgctct 5035343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 311 - 374
Target Start/End: Original strand, 11328889 - 11328952
Alignment:
Q  311 gcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgag 374  Q
    |||||||||||||| |||| ||| ||||||||| ||| ||||  ||||||||||||||||||||    
T  11328889 gcatgtgtgagttacaagtatcacattgcttagtaaaatggaatttgaacactttataagtgag 11328952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 401 - 444
Target Start/End: Complemental strand, 34900669 - 34900626
Alignment:
Q  401 attttgggttaagatgtggtgtccaactcacttgtgtggttgct 444  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||    
T  34900669 attttaggtgaagatgtggtgtccaactcacttgtgtggttgct 34900626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 341 - 423
Target Start/End: Complemental strand, 10074118 - 10074036
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtc 423  Q
    |||||||||  | ||||||||| |||||||| ||||||||||||||  || ||||||||| |||||||| ||  |||||||||    
T  10074118 tagaaaagtaaacgttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaaagtgtggtgtc 10074036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 446
Target Start/End: Complemental strand, 405112 - 405043
Alignment:
Q  377 gacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgctct 446  Q
    |||||||||| |||| |||||||  |||| ||||||| |||||||| ||||||||||  |||||||||||    
T  405112 gacccataaaatcaaagccttaaagttttaggttaaggtgtggtgttcaactcactttagtggttgctct 405043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 2377796 - 2377853
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  2377796 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 2377853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 2578559 - 2578502
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||||||||||||| ||||||||||||||  ||  |||||||| ||||||||    
T  2578559 aggttgaacactttataagtaagaggacccataaacccatagccttaaggttttgggt 2578502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 389 - 430
Target Start/End: Original strand, 3624849 - 3624890
Alignment:
Q  389 caatgccttaagattttgggttaagatgtggtgtccaactca 430  Q
    ||||||||||| |||||||||||||| |||||||||||||||    
T  3624849 caatgccttaaaattttgggttaagacgtggtgtccaactca 3624890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 354 - 407
Target Start/End: Original strand, 16454619 - 16454672
Alignment:
Q  354 gttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    ||||||||| |||||||| ||||||||||||||  || ||||||||||||||||    
T  16454619 gttgaacaccttataagtaagaggacccataaacccattgccttaagattttgg 16454672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 35210246 - 35210303
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  35210246 aggttgaacaccttataagtaagaggacccataaaaccattgccttaaggttttgggt 35210303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 392 - 448
Target Start/End: Complemental strand, 3075982 - 3075926
Alignment:
Q  392 tgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgctctga 448  Q
    ||||||||||||||| |||||  ||| |||||||||||| | |||||||||||||||    
T  3075982 tgccttaagattttgagttaaagtgtcgtgtccaactcaatcgtgtggttgctctga 3075926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 407
Target Start/End: Original strand, 1846790 - 1846845
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    ||||||||||| |||||||| |||| |||||||||| || ||||||||| ||||||    
T  1846790 aggttgaacaccttataagtaagagcacccataaatccattgccttaaggttttgg 1846845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 2579988 - 2579917
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtc 423  Q
    ||||||||||| |||||||| ||||||||||||||  ||  |||||||| |||||||| |  ||||||||||    
T  2579988 aggttgaacacattataagtaagaggacccataaacccacagccttaaggttttgggtaagaatgtggtgtc 2579917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 33605685 - 33605724
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacc 380  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  33605685 tagaaaagtggaggttgaacactttataattgagaagacc 33605724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 14748454 - 14748397
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||| | |||||||||||||| ||| ||| ||||| ||||||||    
T  14748454 aggttgaacaccttataaataagaggacccataaactcattgcgttaaggttttgggt 14748397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 29028161 - 29028222
Alignment:
Q  381 cataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttg 442  Q
    |||||| |||||| | |||  ||||| ||||||||||||||||||||| |||||| ||||||    
T  29028161 cataaactcaatgtcctaatgttttgagttaagatgtggtgtccaacttacttgtatggttg 29028222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 29518545 - 29518602
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || | ||||||| ||||||||    
T  29518545 aggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggt 29518602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 29518962 - 29519019
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || | ||||||| ||||||||    
T  29518962 aggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggt 29519019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 341 - 406
Target Start/End: Original strand, 31714701 - 31714765
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttg 406  Q
    ||||||||||||||||||||  | ||||| ||||||||||||| || ||| ||||||||| |||||    
T  31714701 tagaaaagtggaggttgaacgttatataa-tgagaggacccattaactcattgccttaaggttttg 31714765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 32460696 - 32460639
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||| ||||||  || ||||||||| ||||||||    
T  32460696 aggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggt 32460639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 32741221 - 32741278
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || | ||||||| ||||||||    
T  32741221 aggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggt 32741278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 4e-19; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 23714939 - 23714886
Alignment:
Q  389 caatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttg 442  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23714939 caatgccttaagattttgggtgaagatgtggtgtccaactcacttgtgtggttg 23714886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 42282146 - 42282101
Alignment:
Q  340 ttagaaaagtggaggttgaacactttataagtgagaggacccataa 385  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  42282146 ttagaaaagtggaggttgaacactttataagtgaaaggacccataa 42282101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 317 - 421
Target Start/End: Complemental strand, 28855884 - 28855780
Alignment:
Q  317 gtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatg 416  Q
    ||||||||||||| | | ||||||| |||||||| |||||||  ||||||||||||| | | | |||||||  ||||||||||| ||| |||| ||||||    
T  28855884 gtgagttagaagtctgacattgcttggaaaagtgaaggttgagtactttataagtgacatgcctcataaatctaatgccttaaggtttcgggtaaagatg 28855785  T
Q  417 tggtg 421  Q
    |||||    
T  28855784 tggtg 28855780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 352 - 442
Target Start/End: Original strand, 7517622 - 7517712
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga-tgtggtgtccaactcacttgtgtggttg 442  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||| ||||| |||||||||   ||||||||||||||||    
T  7517622 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttggg-taagagtgtggtgtctgtctcacttgtgtggttg 7517712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 37533126 - 37533056
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtc 423  Q
    ||||||||||| |||||||| |||||||||||||| ||| ||||||||| |||||||| ||| |||||||||    
T  37533126 aggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaaag-tgtggtgtc 37533056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 1085732 - 1085675
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||||||||||||| ||||||||||||||  || ||||||||| ||||||||    
T  1085732 aggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggt 1085675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 37533480 - 37533423
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||| || ||||||||| ||||||||    
T  37533480 aggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggt 37533423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 352 - 444
Target Start/End: Complemental strand, 3114556 - 3114464
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgct 444  Q
    |||||||||| ||||||||| ||   |||||| || | ||||| |||| ||||||| ||||  ||||||||||||||||||||| ||||||||    
T  3114556 aggttgaacaatttataagtaaggaaacccatgaactaaatgctttaatattttggattaaagtgtggtgtccaactcacttgtatggttgct 3114464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 354 - 422
Target Start/End: Complemental strand, 36939847 - 36939779
Alignment:
Q  354 gttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgt 422  Q
    ||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||| ||  ||||||||    
T  36939847 gttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggtaaaagtgtggtgt 36939779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 352 - 407
Target Start/End: Original strand, 11845233 - 11845288
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    ||||||||||| |||||||| ||||||||||||||| || ||||||||| ||||||    
T  11845233 aggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgg 11845288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 352 - 442
Target Start/End: Original strand, 19122773 - 19122863
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga-tgtggtgtccaactcacttgtgtggttg 442  Q
    ||||||||||| |||||||| ||||||| ||||||| || ||||||||| ||||||| ||||| ||||||||| | ||  ||||||||||||    
T  19122773 aggttgaacaccttataagtaagaggactcataaatccattgccttaaggttttggg-taagagtgtggtgtctatcttgcttgtgtggttg 19122863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 22566778 - 22566721
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  22566778 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 22566721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 22567155 - 22567102
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagatttt 405  Q
    ||||||||||| |||||||| |||||||||||||| ||| ||||||||| ||||    
T  22567155 aggttgaacaccttataagtaagaggacccataaactcattgccttaaggtttt 22567102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 29157607 - 29157664
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||| ||||||||||| || ||||||||| ||||||||    
T  29157607 aggttgaacaccttataagtaagacgacccataaatccattgccttaaggttttgggt 29157664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 30245119 - 30245176
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||| |||||||||| ||| ||||||||| ||||||||    
T  30245119 aggttgaacaccttataagtaagacgacccataaactcattgccttaaggttttgggt 30245176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 355 - 412
Target Start/End: Original strand, 33773281 - 33773338
Alignment:
Q  355 ttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaa 412  Q
    |||||| ||||||| ||||||||||||||||||  ||||  |||||||||||||||||    
T  33773281 ttgaacgctttatatgtgagaggacccataaatctaatgttttaagattttgggttaa 33773338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 37345949 - 37345994
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaa 386  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||    
T  37345949 tagaaaagtggaggttaaacattttataagtgagaagacccataaa 37345994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 45434678 - 45434735
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| |||||||||||||| | | ||||||||| ||||||||    
T  45434678 aggttgaacaccttataagtaagaggacccataaacttactgccttaaggttttgggt 45434735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 341 - 381
Target Start/End: Original strand, 10341863 - 10341903
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggaccc 381  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  10341863 tagaaaagtggaggttgaacactttataagtgggagaaccc 10341903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 302 - 386
Target Start/End: Original strand, 42730308 - 42730392
Alignment:
Q  302 tgttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaa 386  Q
    |||||||| ||| || ||||||||||||| || || | || |||||||||||||||| || ||||||| ||| | ||||||||||    
T  42730308 tgttgtgtagcaagtctgagttagaagttccacatcggtttgaaaagtggaggttgatcattttataaatgaaaagacccataaa 42730392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 340 - 407
Target Start/End: Complemental strand, 4124216 - 4124149
Alignment:
Q  340 ttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    |||||||| | ||||||  |||||||||||||||||||||| ||||| ||| ||| ||||| ||||||    
T  4124216 ttagaaaatttgaggtttgacactttataagtgagaggaccaataaactcattgcattaaggttttgg 4124149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 354 - 409
Target Start/End: Original strand, 6054604 - 6054659
Alignment:
Q  354 gttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  6054604 gttgaacaccttataagtaagaggacccataaacacattgccttaaggttttgggt 6054659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 442
Target Start/End: Original strand, 30244312 - 30244402
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga-tgtggtgtccaactcacttgtgtggttg 442  Q
    |||||||| || |||||||| ||||||| ||||||  || ||||||||| |||||||| |||| |||||||||   ||||||||||||||||    
T  30244312 aggttgaagaccttataagtaagaggactcataaacccattgccttaaggttttgggt-aagagtgtggtgtctctctcacttgtgtggttg 30244402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 45679557 - 45679478
Alignment:
Q  344 aaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtc 423  Q
    |||| |||| |||| | |||||||||||||||||||| ||||| | ||| ||||||  ||||||||||  ||||||||||    
T  45679557 aaaaatggatgttggatactttataagtgagaggacctataaacttaataccttaaagttttgggttataatgtggtgtc 45679478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 365 - 443
Target Start/End: Complemental strand, 22768616 - 22768538
Alignment:
Q  365 tataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgc 443  Q
    ||||| ||||||||||| || |  |||||||||||| |||||  | || |||||||||| |||||| ||||||||||||    
T  22768616 tataaatgagaggacccgtatacccaatgccttaaggttttgattgaacatgtggtgtctaactcatttgtgtggttgc 22768538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 32568017 - 32567963
Alignment:
Q  390 aatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgct 444  Q
    ||||||||||| |||| ||||||||||||||||||||  ||||||  ||||||||    
T  32568017 aatgccttaaggttttaggttaagatgtggtgtccaatccacttgcatggttgct 32567963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 328 - 449
Target Start/End: Original strand, 40639585 - 40639707
Alignment:
Q  328 gtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggtt-aagatgtggtgtccaa 426  Q
    |||||| |||| ||||||||| |||| ||||||| |||| || ||| |||| | |||||||||||  ||| || ||||||||| ||| ||| || | |||    
T  40639585 gtttcacattgattagaaaaggggagattgaacattttagaattgataggatcaataaattcaatatctttaggttttgggttaaaggtgtagtattcaa 40639684  T
Q  427 ctcacttgtgtggttgctctgaa 449  Q
    ||||||| ||||| |||| ||||    
T  40639685 ctcacttatgtggctgctttgaa 40639707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 23493 - 23436
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||   | ||||||||| ||||||||    
T  23493 aggttgaacaccttataagtaagaggacccataaacctattgccttaaggttttgggt 23436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 7192786 - 7192847
Alignment:
Q  381 cataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttg 442  Q
    |||||| |||||| |||||| ||||| || |||||||| |||||||||||||| || |||||    
T  7192786 cataaactcaatgtcttaaggttttgagtaaagatgtgatgtccaactcacttctgaggttg 7192847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 45335585 - 45335508
Alignment:
Q  349 tggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaa 426  Q
    |||| ||||| ||||||||||||||||| |||||||||    |||||||||| || ||   |||||||||||||||||    
T  45335585 tggatgttgagcactttataagtgagagaacccataaacattatgccttaaggttgtgacctaagatgtggtgtccaa 45335508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 6e-18; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 685 - 780
Target Start/End: Complemental strand, 12969710 - 12969615
Alignment:
Q  685 caggggggattttaaattgaacaattttgaagatggagttttgtcatctgcttttatggttggacttctcgtggcttctccaatatttgcctctct 780  Q
    ||||||||||||||| ||||  |||||| ||||||| |||||||||||||| ||||||||||||||| |  | ||||||||||| ||||| |||||    
T  12969710 caggggggattttaacttgagtaattttcaagatggtgttttgtcatctgcatttatggttggacttttaattgcttctccaatttttgcttctct 12969615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 32445910 - 32446028
Alignment:
Q  335 attgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttg 434  Q
    |||||||||| ||| |||||| |  ||||||| |||||||||||||||||||  ||| |||||||| |||||||||||  |||||||||   ||||||||    
T  32445910 attgcttagagaagaggaggtggtgcactttacaagtgagaggacccataaacccaacgccttaaggttttgggttaaagtgtggtgtctctctcacttg 32446009  T
Q  435 tgtggttgctctgaaccca 453  Q
    |  ||||||||| ||||||    
T  32446010 ttaggttgctctcaaccca 32446028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 316 - 418
Target Start/End: Complemental strand, 31866128 - 31866026
Alignment:
Q  316 tgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagat 415  Q
    ||||||||| |||| ||| |||||||   |||||||| ||  |||| ||||||||||||| |||||||||||||||| ||||||| |||||| | |||||    
T  31866128 tgtgagttaaaagtctcacattgcttgtgaaagtggaagtgaaacattttataagtgagaagacccataaattcaattccttaaggttttggataaagat 31866029  T
Q  416 gtg 418  Q
    |||    
T  31866028 gtg 31866026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 341 - 397
Target Start/End: Original strand, 31509654 - 31509710
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgcctt 397  Q
    |||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||    
T  31509654 tagaaaagtggaggttgagcactttataagtgagaggactcataaactcattgcctt 31509710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 341 - 397
Target Start/End: Original strand, 31509762 - 31509818
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgcctt 397  Q
    |||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||    
T  31509762 tagaaaagtggaggttgagcactttataagtgagaggactcataaactcattgcctt 31509818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 41632813 - 41632881
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||  ||||||||||| |||||||| ||||||||||||||  |||||| ||||||||||||||    
T  41632813 tagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccaatgctttaagattttgggt 41632881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 317 - 412
Target Start/End: Original strand, 2828061 - 2828156
Alignment:
Q  317 gtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaa 412  Q
    ||||||||||||| ||| ||   |||||||||||||||||| ||||||||||||||| |  | |||||| |  ||||||||||| |||||||||||    
T  2828061 gtgagttagaagtgtcacatgatttagaaaagtggaggttgtacactttataagtgaaataatccataagtctaatgccttaaggttttgggttaa 2828156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 352 - 446
Target Start/End: Original strand, 26074654 - 26074748
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga-tgtggtgtccaactcacttgtgtggttgctct 446  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||| ||||| |||||||||   |||||| |||||||||||||    
T  26074654 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttggg-taagagtgtggtgtctctctcactagtgtggttgctct 26074748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 26591035 - 26590972
Alignment:
Q  343 gaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttg 406  Q
    |||||||  ||||||||||| |||||||| |||||| ||||||||||||||||||||| |||||    
T  26591035 gaaaagtaaaggttgaacaccttataagtaagaggatccataaattcaatgccttaaggttttg 26590972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 9498770 - 9498713
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||||||||||||    
T  9498770 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttgggt 9498713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 315 - 444
Target Start/End: Complemental strand, 9510673 - 9510544
Alignment:
Q  315 gtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga 414  Q
    |||||||||| | |||||| ||||  ||||||||||||||||||    |||||||||||||||| |||||||   |||||||||| ||||| ||| || |    
T  9510673 gtgtgagttatatgtttcacattgaatagaaaagtggaggttgagtcatttataagtgagaggagccataaacctaatgccttaaaattttaggtaaaaa 9510574  T
Q  415 tgtggtgtccaactcacttgtgtggttgct 444  Q
    | | |||||   || |||||||||||||||    
T  9510573 tatagtgtctctcttacttgtgtggttgct 9510544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 19275560 - 19275627
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||| |||||||||||||| |||||  ||| |||||||||||||| || |||||||||||||||    
T  19275560 tagaaaagtagaggttgaacactt-ataaggaagaagacccataaattcattgtcttaagattttgggt 19275627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 352 - 414
Target Start/End: Complemental strand, 26075278 - 26075216
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga 414  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| |||||||| ||||    
T  26075278 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaaga 26075216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 302 - 399
Target Start/End: Complemental strand, 10351339 - 10351242
Alignment:
Q  302 tgttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaa 399  Q
    |||||||| ||| |||| |||||||||| ||| ||||  || ||||| |||||||||||| |||||| |||| | |||||||||| ||| || |||||    
T  10351339 tgttgtgtggcaagtgtaagttagaagtctcacattggctaaaaaagcggaggttgaacattttatacgtgaaatgacccataaactcattgtcttaa 10351242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 18603236 - 18603179
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  18603236 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 18603179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 36522023 - 36521955
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||    
T  36522023 tagaaaagttgaggttgaacactctttaaatgagaggacccataaaccaattgccttaaggttttgggt 36521955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 340 - 383
Target Start/End: Complemental strand, 6557514 - 6557471
Alignment:
Q  340 ttagaaaagtggaggttgaacactttataagtgagaggacccat 383  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||    
T  6557514 ttagaaaagtgtaggttgagcactttataagtgagaggatccat 6557471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 354 - 409
Target Start/End: Original strand, 25327979 - 25328034
Alignment:
Q  354 gttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||| |||||||| ||||||||||||||   ||||||||||| ||||||||    
T  25327979 gttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggt 25328034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 407
Target Start/End: Original strand, 33747813 - 33747868
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    ||||| || ||||||||||| |||||| ||||||| ||| ||||||||||||||||    
T  33747813 aggttaaatactttataagtaagaggatccataaactcattgccttaagattttgg 33747868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 315 - 386
Target Start/End: Complemental strand, 36522390 - 36522319
Alignment:
Q  315 gtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaa 386  Q
    |||||||||| | || ||| ||||  ||||||| |||| |||||||| |||||||||||||||||| |||||    
T  36522390 gtgtgagttatatgtctcacattggatagaaaaatggaagttgaacattttataagtgagaggaccaataaa 36522319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 444
Target Start/End: Complemental strand, 38015943 - 38015864
Alignment:
Q  365 tataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgct 444  Q
    ||||||||||| ||| |||| ||  |||| ||||||||||||||| ||| |||| |||| | |||||||||||| |||||    
T  38015943 tataagtgagatgactcatatatctaatgacttaagattttgggtgaagttgtgatgtcaatctcacttgtgtgcttgct 38015864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 352 - 442
Target Start/End: Original strand, 35150049 - 35150138
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttg 442  Q
    ||||||||||| |||||||| |||| |||||||||| || || |||||| |||||||| ||  |||||||||   |||||| |||||||||    
T  35150049 aggttgaacaccttataagtaagag-acccataaatccattgtcttaaggttttgggtaaaagtgtggtgtctctctcactagtgtggttg 35150138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 1028644 - 1028599
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaa 386  Q
    |||||||||  ||| |||||||||||||||| ||||||||||||||    
T  1028644 tagaaaagtaaaggatgaacactttataagtaagaggacccataaa 1028599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 6224238 - 6224291
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagatttt 405  Q
    ||||||||||| |||||||| |||||||||||||| |||  |||||||| ||||    
T  6224238 aggttgaacaccttataagtaagaggacccataaactcatcgccttaaggtttt 6224291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 9048710 - 9048755
Alignment:
Q  390 aatgccttaagattttgggttaagatgtggtgtccaactcacttgt 435  Q
    |||||||||||||||||| | ||||||||||||| | |||||||||    
T  9048710 aatgccttaagattttggatgaagatgtggtgtcaatctcacttgt 9048755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 15370141 - 15370198
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||  |||||||| ||||||||||||||| ||  |||||||| ||||||||    
T  15370141 aggttgaacatcttataagtaagaggacccataaatccacagccttaaggttttgggt 15370198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 40296431 - 40296374
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || |||||| || ||||||||    
T  40296431 aggttgaacaccttataagtaagaggacccataaacccattgccttgaggttttgggt 40296374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 41170676 - 41170733
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||  |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  41170676 aggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 41170733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 341 - 448
Target Start/End: Complemental strand, 1188715 - 1188608
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggt 440  Q
    ||||||||||||||||||| | ||||||||||||| ||| |||||| ||| ||| ||||| |||||||| ||  ||||| |||   ||||||| ||||||    
T  1188715 tagaaaagtggaggttgaatattttataagtgagaagactcataaactcattgctttaaggttttgggtaaaagtgtggcgtctctctcacttatgtggt 1188616  T
Q  441 tgctctga 448  Q
    ||||||||    
T  1188615 tgctctga 1188608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 352 - 442
Target Start/End: Complemental strand, 26661638 - 26661548
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga-tgtggtgtccaactcacttgtgtggttg 442  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||||| |||||||| |||| |||||||||   ||| ||||||||||||    
T  26661638 aggttgaacaccttataagtgagaggacccataaactcattgccttaaggttttgggt-aagagtgtggtgtctctctcgcttgtgtggttg 26661548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 317 - 464
Target Start/End: Complemental strand, 2229416 - 2229264
Alignment:
Q  317 gtgagttagaagtttcaaattgcttagaaaagtggaggttgaacact-----ttataagtgagaggacccataaattcaatgccttaagattttgggtta 411  Q
    |||||||||||||  ||  || ||||||||| | |||||||| ||||     |||||||||||||||| ||||||   ||||||||||  ||||| ||||    
T  2229416 gtgagttagaagtcccacgttacttagaaaatttgaggttgaccactttatattataagtgagaggactcataaaccaaatgccttaaagttttgagtta 2229317  T
Q  412 agatgtggtgtccaactcacttgtgtggttgctctgaacccagtgtcgatgat 464  Q
    ||||||||||| | ||| | ||||||||||||||| |||| | ||| ||||||    
T  2229316 agatgtggtgttcgactgagttgtgtggttgctctcaacctaatgtagatgat 2229264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 365 - 448
Target Start/End: Complemental strand, 47057809 - 47057726
Alignment:
Q  365 tataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgctctga 448  Q
    |||||||||||||||| ||| |  ||| | |||||  |||||||| |||||||||| | |||||||||||||||||||||||||    
T  47057809 tataagtgagaggacctatatacccaaagtcttaaagttttgggtgaagatgtggtatacaactcacttgtgtggttgctctga 47057726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 344 - 406
Target Start/End: Complemental strand, 1187488 - 1187426
Alignment:
Q  344 aaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttg 406  Q
    ||||||||||||| |||| ||||||||||||| |||||||||| ||| | |||||||||||||    
T  1187488 aaaagtggaggttaaacattttataagtgagaagacccataaactcattaccttaagattttg 1187426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 17294619 - 17294676
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||||||||||||| ||||||||||||||  || ||||||||| ||||||||    
T  17294619 aggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggt 17294676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 342 - 407
Target Start/End: Original strand, 24448309 - 24448374
Alignment:
Q  342 agaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    ||||||||||| |||||||| ||||||||||||||| | |||||| ||| || |||||||||||||    
T  24448309 agaaaagtggaagttgaacattttataagtgagagggctcataaactcattgtcttaagattttgg 24448374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 371 - 467
Target Start/End: Original strand, 30208187 - 30208284
Alignment:
Q  371 tgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtcc-aactcacttgtgtggttgctctgaacccagtgtcgatgatcac 467  Q
    ||||||||||| |||| ||||||| ||||| |||||||||||  |||||||||| ||||||||||   ||||||||||| |||| ||| |||| ||||    
T  30208187 tgagaggacccttaaactcaatgcattaaggttttgggttaaagtgtggtgtccaaactcacttgccaggttgctctgagcccaatgtggatggtcac 30208284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 344 - 453
Target Start/End: Complemental strand, 30576707 - 30576598
Alignment:
Q  344 aaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttgc 443  Q
    |||||| ||||||||||||||||| |||||||||||||||| |   |||| |||||  |||||||| || ||||  ||||   ||||||||||| |||||    
T  30576707 aaaagtagaggttgaacactttatgagtgagaggacccatagacataatgtcttaatgttttgggtaaaaatgtaatgtctctctcacttgtgttgttgc 30576608  T
Q  444 tctgaaccca 453  Q
    ||||| ||||    
T  30576607 tctgagccca 30576598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 5320092 - 5320024
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||  | ||||||||| ||||||||||||||||||||||| |||  |||||||| ||||||||    
T  5320092 tagaaaagtaaaagttgaacaccttataagtgagaggacccataaactcatagccttaaggttttgggt 5320024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 10351191 - 10351259
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||| | |||||||||||||||||||||||||| |||||||||  || | | ||||||||||||||    
T  10351191 tagaaaaatagaggttgaacactttataagtgagagaacccataaacacattactttaagattttgggt 10351259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 421
Target Start/End: Complemental strand, 17996118 - 17996014
Alignment:
Q  317 gtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatg 416  Q
    ||||||||||||| | | ||||||| |||||||| |||||||  |||||||||| || | | | |||||||  ||||||||||| ||| |||| ||||||    
T  17996118 gtgagttagaagtctgacattgcttggaaaagtgaaggttgagtactttataagcgacatgcctcataaatctaatgccttaaggtttcgggtaaagatg 17996019  T
Q  417 tggtg 421  Q
    |||||    
T  17996018 tggtg 17996014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 365 - 435
Target Start/End: Complemental strand, 8240467 - 8240396
Alignment:
Q  365 tataagtgagaggacccataaattcaatgcctta-agattttgggttaagatgtggtgtccaactcacttgt 435  Q
    ||||||||| |||| | |||| | |||||||||  || ||||||||||||||||||||||||||||||||||    
T  8240467 tataagtgaaaggatcaataagtccaatgcctttcaggttttgggttaagatgtggtgtccaactcacttgt 8240396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 352 - 422
Target Start/End: Complemental strand, 44290941 - 44290870
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaaga-tgtggtgt 422  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| |||||||| |||| ||||||||    
T  44290941 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaagagtgtggtgt 44290870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 318 - 446
Target Start/End: Complemental strand, 50081207 - 50081077
Alignment:
Q  318 tgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgt 417  Q
    ||||||||||||| || |||||||  ||||||||||| |||||| |||||||||||||  ||  |||||   | || || ||  |||| ||||||  |||    
T  50081207 tgagttagaagttccacattgcttgaaaaagtggaggctgaacattttataagtgagaaaacttataaacctactgtctcaaagttttaggttaaagtgt 50081108  T
Q  418 g--gtgtccaactcacttgtgtggttgctct 446  Q
    |  ||||||||||||||||||||||||||||    
T  50081107 ggtgtgtccaactcacttgtgtggttgctct 50081077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 344 - 442
Target Start/End: Complemental strand, 8240728 - 8240630
Alignment:
Q  344 aaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttg 442  Q
    ||||||| ||||||||||   ||||||||| | ||  ||||||||||||  |||||| | || |||||||||||||| ||||||||| || ||||||||    
T  8240728 aaaagtgaaggttgaacaagatataagtgaaacgagtcataaattcaataacttaaggtattaggttaagatgtggtatccaactcatttatgtggttg 8240630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 19283582 - 19283516
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    |||||||||||||||||| |||||| ||| ||||||||| |||||| |||  |||||||| ||||||    
T  19283582 tagaaaagtggaggttgagcactttgtaaatgagaggacacataaactcatcgccttaaggttttgg 19283516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 365 - 435
Target Start/End: Complemental strand, 43400691 - 43400621
Alignment:
Q  365 tataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgt 435  Q
    ||||||||| | ||| |||||||||||||  ||||| |||| ||| ||||||||||| |||||||||||||    
T  43400691 tataagtgatatgactcataaattcaatgttttaaggtttttggtgaagatgtggtgaccaactcacttgt 43400621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 7373363 - 7373408
Alignment:
Q  390 aatgccttaagattttgggttaagatgtggtgtccaactcacttgt 435  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||||    
T  7373363 aatgtcttaaaatttttggttaagatgtggtgtccaactcacttgt 7373408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 405
Target Start/End: Original strand, 12772902 - 12772967
Alignment:
Q  340 ttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagatttt 405  Q
    |||||||| | |||||||||| ||||||||||||||| | ||||||||||| || |||||| ||||    
T  12772902 ttagaaaacttgaggttgaacgctttataagtgagagaatccataaattcattgtcttaaggtttt 12772967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 22793309 - 22793354
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaa 386  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||||    
T  22793309 tagaaaagtagaggttgaaaactttataagtgagaggatccataaa 22793354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 32594832 - 32594775
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| |||||||||||||| ||| || |||||| ||||||||    
T  32594832 aggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggt 32594775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 41157033 - 41157090
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| |||||||||||||| ||| ||| ||||| ||||||||    
T  41157033 aggttgaacaccttataagtaagaggacccataaactcattgctttaaggttttgggt 41157090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 48588604 - 48588547
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||| ||||| |||||||| ||||||||| ||||||||    
T  48588604 aggttgaacaccttataagtaagaagacccgtaaattcattgccttaaggttttgggt 48588547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 22077622 - 22077554
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    |||||||||  ||||||||||| |||||||| |||||||||||||| ||   |||||||| ||||||||    
T  22077622 tagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcgtagccttaaggttttgggt 22077554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 41184541 - 41184493
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaag 400  Q
    |||||||||||||||||||| ||||||||||||||  || |||||||||    
T  41184541 aggttgaacactttataagtaagaggacccataaacccattgccttaag 41184493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 387
Target Start/End: Original strand, 44091936 - 44091971
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaat 387  Q
    ||||||||||||||||||||||||| ||||||||||    
T  44091936 aggttgaacactttataagtgagagaacccataaat 44091971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 302 - 392
Target Start/End: Complemental strand, 3458767 - 3458679
Alignment:
Q  302 tgttgtgttgcatgtgtgagttagaagtttcaaattgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaat 392  Q
    |||||||| ||| ||| |||||| ||||| || |||||| |||||| |||||||||| ||| |||||| ||||| || |||||||||||||    
T  3458767 tgttgtgtggcaagtg-gagttaaaagttacacattgct-agaaaaatggaggttgagcacgttataaatgagatgatccataaattcaat 3458679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 22077237 - 22077171
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    |||||||||  |||||||| || |||||||| |||||||||||||| ||| |||| |||| ||||||    
T  22077237 tagaaaagtaaaggttgaataccttataagtaagaggacccataaactcattgccctaaggttttgg 22077171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 335 - 453
Target Start/End: Original strand, 30207834 - 30207948
Alignment:
Q  335 attgcttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaa-ctcactt 433  Q
    |||| ||| ||||||| ||||||| ||||||    ||||||||| |||||||  || ||||||||| ||||||||||   |||||| ||||| ||||| |    
T  30207834 attgtttataaaagtgaaggttgagcacttt----gtgagaggatccataaac-cactgccttaaggttttgggttacagtgtggtatccaaactcacct 30207928  T
Q  434 gtgtggttgctctgaaccca 453  Q
    ||||||||||||||| ||||    
T  30207929 gtgtggttgctctgagccca 30207948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 399 - 444
Target Start/End: Complemental strand, 3808975 - 3808930
Alignment:
Q  399 agattttgggttaagatgtggtgtccaactcacttgtgtggttgct 444  Q
    ||||||||||| || |||||||||||||||||||||| | ||||||    
T  3808975 agattttgggtgaacatgtggtgtccaactcacttgtatagttgct 3808930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 14318909 - 14318966
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||| |||||||||||  | ||||||||| ||||||||    
T  14318909 aggttgaacaccttataagtaagaagacccataaatctattgccttaaggttttgggt 14318966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 26662014 - 26661957
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||||||| ||||||||||   | ||||||||| ||||||||    
T  26662014 aggttgaacaccttataagtgagaagacccataaaccgattgccttaaggttttgggt 26661957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 31767277 - 31767220
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||| ||   ||||||||||| ||||||||    
T  31767277 aggttgaacaccttataagtaagaggacccattaacctaatgccttaaggttttgggt 31767220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 34364967 - 34365024
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  ||  |||||||| ||||||||    
T  34364967 aggttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgggt 34365024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 40082449 - 40082505
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||  |||||||||| ||||||||| ||||||||    
T  40082449 aggttgaacaccttataagtaagagga-tcataaattcattgccttaaggttttgggt 40082505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 44290574 - 44290517
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||  |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  44290574 aggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 44290517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 352 - 407
Target Start/End: Original strand, 5399 - 5454
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 407  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||||||||||    
T  5399 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttgg 5454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 630 - 573
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 409  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  630 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 340 - 400
Target Start/End: Original strand, 3108 - 3168
Alignment:
Q  340 ttagaaaagtggaggttgaacactttataagtgagaggacccataaattcaatgccttaag 400  Q
    |||||||||||||||||  |||||||||||||||||| | | ||||| ||| |||||||||    
T  3108 ttagaaaagtggaggttatacactttataagtgagagcatcaataaactcattgccttaag 3168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 403
Target Start/End: Original strand, 5819 - 5870
Alignment:
Q  352 aggttgaacactttataagtgagaggacccataaattcaatgccttaagatt 403  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||||||    
T  5819 aggttgaacaccttataagtaagaggacccataaacccattgccttaagatt 5870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 13055 - 13003
Alignment:
Q  372 gagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaa 426  Q
    ||||||||||||||| ||  || ||||||||||| ||||||||||||||||||||    
T  13055 gagaggacccataaactc--tgtcttaagatttttggttaagatgtggtgtccaa 13003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 39487 - 39524
Alignment:
Q  341 tagaaaagtggaggttgaacactttataagtgagagga 378  Q
    |||||||||||||||||||| | |||||||||||||||    
T  39487 tagaaaagtggaggttgaactccttataagtgagagga 39524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 365 - 442
Target Start/End: Complemental strand, 15513 - 15436
Alignment:
Q  365 tataagtgagaggacccataaattcaatgccttaagattttgggttaagatgtggtgtccaactcacttgtgtggttg 442  Q
    ||||||| | |||| | ||||||||| || ||||||||||||| | ||||||||| ||||||||  ||||| ||||||    
T  15513 tataagtaaaaggatcgataaattcattgtcttaagattttggataaagatgtggcgtccaacttgcttgtatggttg 15436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University