View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5684-Insertion-3 (Length: 1020)
Name: NF5684-Insertion-3
Description: NF5684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5684-Insertion-3 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 891; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 891; E-Value: 0
Query Start/End: Original strand, 8 - 1012
Target Start/End: Original strand, 17925201 - 17926223
Alignment:
| Q |
8 |
ttataaagacaagatggaatcttaccggaaaaattgttctcacccaaagctaaaaatgtcaagtgtttgcggcaacatatttcttgtggaatatctccct |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17925201 |
ttataaagacaagatggaatcttaccggaaaaattgttctcacccaaagctaaaaatgtcaagtgtttgcggcaacatatttcttgtggaatatctccct |
17925300 |
T |
|
| Q |
108 |
caaaattgttaagagcagctgatagacgtgttaagcatgaaagatttcctatgaatgaagggattcctccagttaaattgttatgcgcaacagtcatggc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17925301 |
caaaattgttaagagcagctgatagacgtgttaagcatgaaagatttcctatgaatgaagggattcctccagttaaattgttatgcgcaacagtcatggc |
17925400 |
T |
|
| Q |
208 |
ttgaagttttttcaaagagccgatttcagttggtattttaccaatgagatggttcccactcaaaaacaataatttgagattagaacaatatgtcaggttt |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17925401 |
ttgaagttttttcaaagagccgatttcagttggtattttaccaatgagatggttcccactcaaaaacaataatttgagattagaacaatatgtcaggttt |
17925500 |
T |
|
| Q |
308 |
gtaggaatctcacctacaaaagaattattgctgagaaaaagttgctgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttgt |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17925501 |
gtaggaatctcacctacaaaagaattattgctgagaaaaagttgctgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttgt |
17925600 |
T |
|
| Q |
408 |
ctccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgttc |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17925601 |
ctccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgttc |
17925700 |
T |
|
| Q |
508 |
atgcatggggctgcatgtgattccatgccacttgcaaaaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattctttg |
607 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17925701 |
atgcatggggctgcatgtgattccatgccacttgcagaaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattctttg |
17925800 |
T |
|
| Q |
608 |
aatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccctaattttgtttggaccaaaccacattaaattgaaggtaagcnnnnnnn |
707 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17925801 |
aatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccctaattttgtttggaccaaaccacattaaattgaaggtaagcaaaaaaa |
17925900 |
T |
|
| Q |
708 |
ggagatgaaggtataaaagtggaggtgacaacaaagaaaaagacttca--------tag-agaa---ggaacatgtatttagttttgtttgtgttctata |
795 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||||||||||| |
|
|
| T |
17925901 |
ggagatgaaggtataaaagtggaggtgacaacaaagaaaaagacttcattttggtttagcagaaagtggtttatgtatttagttttgtttgtgttctata |
17926000 |
T |
|
| Q |
796 |
gttattatgtgggaatagagaaggaacatgcatttaaatattggtgtgggaagagaaaattaaagaaaatatctt--caagtgcaagtcaagtcatttga |
893 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
17926001 |
gttattatgtgggaatagagaaggaacatgcatttaaatattggtgtgggaagagaaaattaaagaaaatatctttcaaagtgcaagtcaagtcatttga |
17926100 |
T |
|
| Q |
894 |
acgaacagacagatcagaagcacggcacatgggagataattaatcacctttcgata--ttttgatgcaaaagtcatttattaattatacatgtt-aaagc |
990 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
17926101 |
acgaacagacagatcagaagcacggcacatgggagataattaatcacctttcgataatttttgatgcaaaagtcatttattaattatacatgttcaaagc |
17926200 |
T |
|
| Q |
991 |
-aatwatctttcaatctaaatca |
1012 |
Q |
| |
|
||| |||||||||||||||||| |
|
|
| T |
17926201 |
aaattatctttcaatctaaatca |
17926223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 581; Significance: 0; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 581; E-Value: 0
Query Start/End: Original strand, 7 - 756
Target Start/End: Complemental strand, 12956493 - 12955744
Alignment:
| Q |
7 |
attataaagacaagatggaatcttaccggaaaaattgttctcacccaaagctaaaaatgtcaagtgtttgcggcaacatatttcttgtggaatatctccc |
106 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
12956493 |
attataaagacaagaaggaatcttaccggacaaattgttctcacccaaagctaaaaatgtcaagtgtttgcagcaacatatttcttgtggaatatctccc |
12956394 |
T |
|
| Q |
107 |
tcaaaattgttaagagcagctgatagacgtgttaagcatgaaagatttcctatgaatgaagggattcctccagttaaattgttatgcgcaacagtcatgg |
206 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||| | ||||||||| |
|
|
| T |
12956393 |
tcaaaattgttacgagaagctgatagacgtgttaagcttgaaagatttcctatgaatgaagggattccaccagttaacttgtttctccaaacagtcattc |
12956294 |
T |
|
| Q |
207 |
cttgaagttttttcaaagagccgatttcagttggtattttaccaatgagatggttcccactcaaaaacaataatttgagattagaacaatatgtcaggtt |
306 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| || |||||||||| ||| |
|
|
| T |
12956293 |
tttgaagctttttcaaagagccgatttcagttggtattttaccattgagatggttcccattcaaaaacaataatttgagattggagcaatatgtcaagtt |
12956194 |
T |
|
| Q |
307 |
tgtaggaatctcacctacaaaagaattattgctgagaaaaagttgctgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttg |
406 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
12956193 |
tgttggaatctcacctacaaaagagttattgctgagagaaagtcgttgcaaatgtagcaactgacccaactcctgtggaatttctcctaagaagttgttg |
12956094 |
T |
|
| Q |
407 |
tctccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgtt |
506 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12956093 |
tctccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgtt |
12955994 |
T |
|
| Q |
507 |
catgcatggggctgcatgtgattccatgccacttgcaaaaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattcttt |
606 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
12955993 |
catgcatggggctgcatgtgattccttgccacttgcagaaatggatggaagaattccaagattcaagagcattgtatgggtcacttgaaattgattcttt |
12955894 |
T |
|
| Q |
607 |
gaatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccctaattttgtttggaccaaaccacattaaattgaaggtaagcnnnnnn |
706 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
12955893 |
gaatttgagcaatgccaaatgatcagtttggtttcctattgcagtcattgccttaattttgtttggaccaaaccacattaaatttaaggtaagcaaaaaa |
12955794 |
T |
|
| Q |
707 |
nggagatgaaggtataaaagtggaggtgacaacaaagaaaaagacttcat |
756 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
12955793 |
aggagatgaaggtataaaagtggaggtgacaacaaagaaaaatacttcat |
12955744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 545; E-Value: 0
Query Start/End: Original strand, 7 - 756
Target Start/End: Complemental strand, 12897980 - 12897231
Alignment:
| Q |
7 |
attataaagacaagatggaatcttaccggaaaaattgttctcacccaaagctaaaaatgtcaagtgtttgcggcaacatatttcttgtggaatatctccc |
106 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||| ||| |||| ||||| |||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
12897980 |
attataaagacaagaaggaatcttaccggacaaattgttgacactcaaacctaaatatgtcaagtgtttgaggaaacatatttcttgtggaatatctccc |
12897881 |
T |
|
| Q |
107 |
tcaaaattgttaagagcagctgatagacgtgttaagcatgaaagatttcctatgaatgaagggattcctccagttaaattgttatgcgcaacagtcatgg |
206 |
Q |
| |
|
||||||||||| || | |||| ||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||| | |||| ||| | |
|
|
| T |
12897880 |
tcaaaattgttttcagaaactgacagacgtgttaagcttgaaagatttccaatgaatgaagggattcctccggttaaattgttattccgaacaaacattg |
12897781 |
T |
|
| Q |
207 |
cttgaagttttttcaaagagccgatttcagttggtattttaccaatgagatggttcccactcaaaaacaataatttgagattagaacaatatgtcaggtt |
306 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| || |||||||||||||| |
|
|
| T |
12897780 |
attgaagctttttcaaagagccgaattcagttggtattttaccaatgagatggttcccattcaaatacaataacttgagattggagcaatatgtcaggtt |
12897681 |
T |
|
| Q |
307 |
tgtaggaatctcacctacaaaagaattattgctgagaaaaagttgctgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttg |
406 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| ||| || ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
12897680 |
tgtaggaatctcacctacaaaagaattattggtgagaataaggtgttgcaaatgtagcaactgacccaaatcctgaggaatttctccaaagaagttgttg |
12897581 |
T |
|
| Q |
407 |
tctccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgtt |
506 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12897580 |
tctccaatgtcgagagtttccagaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgtt |
12897481 |
T |
|
| Q |
507 |
catgcatggggctgcatgtgattccatgccacttgcaaaaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattcttt |
606 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
12897480 |
catgcatggggctgcatgtgattccatgccacttgcagaaatggatggaagaattccaagattcaagagcattgtatgggtcactggaaattgattcttt |
12897381 |
T |
|
| Q |
607 |
gaatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccctaattttgtttggaccaaaccacattaaattgaaggtaagcnnnnnn |
706 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
12897380 |
gaatttgagcaatgccaaatgatcagtttggtttcctattgcagccaatgccctaattttgtttggaccaaaccacattaaatttaaggtaagcataaaa |
12897281 |
T |
|
| Q |
707 |
nggagatgaaggtataaaagtggaggtgacaacaaagaaaaagacttcat |
756 |
Q |
| |
|
|| |||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
12897280 |
aggggatgaaggtataaaagtgtaggtgacaacaaagaaaaagacttcat |
12897231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 538; E-Value: 0
Query Start/End: Original strand, 7 - 756
Target Start/End: Complemental strand, 12905602 - 12904852
Alignment:
| Q |
7 |
attataaagacaagatggaatcttaccggaaaaattgtt-ctcacccaaagctaaaaatgtcaagtgtttgcggcaacatatttcttgtggaatatctcc |
105 |
Q |
| |
|
||||||||||||||| || ||||||||||| |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
12905602 |
attataaagacaagaaggtatcttaccggacaaattgtttctcacccaaagctaaaaatgtcaagtgtttgaggaaacatatttcttgtggaatatctcc |
12905503 |
T |
|
| Q |
106 |
ctcaaaattgttaagagcagctgatagacgtgttaagcatgaaagatttcctatgaatgaagggattcctccagttaaattgttatgcgcaacagtcatg |
205 |
Q |
| |
|
||||||||||||| || | |||||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| | |||| |||| |
|
|
| T |
12905502 |
ctcaaaattgttaccagaaactgatagacgtgttaagcttgaaatatttcctatgaatgaagggattccaccggttaacttgtttctccaaacactcatt |
12905403 |
T |
|
| Q |
206 |
gcttgaagttttttcaaagagccgatttcagttggtattttaccaatgagatggttcccactcaaaaacaataatttgagattagaacaatatgtcaggt |
305 |
Q |
| |
|
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| || ||||||||||||| |
|
|
| T |
12905402 |
gtttgaagctttttcaaagagccgatttcagttggtattttaccaatgagatggttcccattcaaatacaataacttgagattggagcaatatgtcaggt |
12905303 |
T |
|
| Q |
306 |
ttgtaggaatctcacctacaaaagaattattgctgagaaaaagttgctgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgtt |
405 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
12905302 |
ttgtaggaatctcacctacaaaagaattattgctgagaataagttgttgcaaatgtagcaactgacccaaatcctgaggaatttctccaaagaagttgtt |
12905203 |
T |
|
| Q |
406 |
gtctccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgt |
505 |
Q |
| |
|
|||| |||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
12905202 |
gtctgtaatgtcgacacttttcagaaaagtgagattggaaacatggggagataaagatccatgtaactgatatctttctaggctcaactctgtaactcgt |
12905103 |
T |
|
| Q |
506 |
tcatgcatggggctgcatgtgattccatgccacttgcaaaaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattctt |
605 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
12905102 |
tcatgcatggggctgcatgtgattccatgccacttgcagaaatggatggaagaattccaagattcaagagcattgtatgggtcactagttattgattctt |
12905003 |
T |
|
| Q |
606 |
tgaatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccctaattttgtttggaccaaaccacattaaattgaaggtaagcnnnnn |
705 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
12905002 |
tgaatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccgtaattttgattggacaaaaccacattaaattgaaggtaagcagaaa |
12904903 |
T |
|
| Q |
706 |
nnggagatgaaggtataaaagtggaggtgacaacaaagaaaaagacttcat |
756 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12904902 |
aaggagatgaaggtataaaagtggaggtgacaacaaagaaaaaggcttcat |
12904852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 516; E-Value: 0
Query Start/End: Original strand, 7 - 981
Target Start/End: Complemental strand, 12930691 - 12929714
Alignment:
| Q |
7 |
attataaagacaagatggaatcttaccggaaaaattgttctcacccaaagctaaaaatgtcaagtgtttgcggcaacatatttcttgtggaatatctccc |
106 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||||| || | |||||| ||||||||||||| || ||||||||||||||||||| | || |
|
|
| T |
12930691 |
attataaagacaagaaggaatcttaccggacaaattgttctcactcacacctaaaattgtcaagtgtttgaggaaacatatttcttgtggaatcttaccg |
12930592 |
T |
|
| Q |
107 |
tcaaaattgttaagagcagctgatagacgtgttaagcatgaaagatttcctatgaatgaagggattcctccagttaaattgttatgcgcaacagtcatgg |
206 |
Q |
| |
|
|||||||| | | |||||||||||||||||||||||||||||| ||||||||||||||| | ||||||| ||||| | |||||| || | |
|
|
| T |
12930591 |
gagaaattgttctcacccaaatttagacgtgttaagcatgaaagatttcctataaatgaagggattccttcggttaaatggttattcccaacagatattg |
12930492 |
T |
|
| Q |
207 |
cttgaagttttttcaaagagccgatttcagttggtattttaccaatgagatggttcccactcaaaaacaataatttgagattagaacaatatgtcaggtt |
306 |
Q |
| |
|
||||||| |||||||||||||| |||||| |||||||||||||| |||||||||||||| ||||| |||||||||||||||| || |||||||||||||| |
|
|
| T |
12930491 |
cttgaagctttttcaaagagccaatttcaattggtattttaccattgagatggttcccattcaaatacaataatttgagattggagcaatatgtcaggtt |
12930392 |
T |
|
| Q |
307 |
tgtaggaatctcacctacaaaagaattattgctgagaaaaagttgctgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttg |
406 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930391 |
tgtaggaatctcacctacaaaagaattattggtgagaataagatgttgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttg |
12930292 |
T |
|
| Q |
407 |
tctccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgtt |
506 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930291 |
tctccaatgtcaagagtttccagaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgtt |
12930192 |
T |
|
| Q |
507 |
catgcatggggctgcatgtgattccatgccacttgcaaaaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattcttt |
606 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
12930191 |
catgcatggggctacatgtgattccatgccacttgcagaagtggatggaagaattccaagattcaagagtattgtatgggtcactagttattgattcttt |
12930092 |
T |
|
| Q |
607 |
gaatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccctaattttgtttggaccaaaccacattaaattgaaggtaagcnnnnnn |
706 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | |
|
|
| T |
12930091 |
gaatttgagcaatgccagatgatcagtttgctttcctattgcagccactgccctaattttgtttggacaaaaccacattaaatttaaggtaatcataaaa |
12929992 |
T |
|
| Q |
707 |
nggagatgaaggtataaaagtggaggtgacaacaaagaaaaagacttca------tagagaaggaa------catg-tatttagttttgtttgtgttcta |
793 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||| | ||||| || ||| ||||||||||||||||||||| | |
|
|
| T |
12929991 |
aggagatgaaggtataaaagtgtaggtgacaacaaagaaaaagacttcattttggtttagaagaaagtggtttatgctatttagttttgtttgtgttcga |
12929892 |
T |
|
| Q |
794 |
tagttattatgtgggaatagagaaggaacatgcatttaaatattggtgtg-ggaagagaaaattaaagaaaatatcttcaagtgcaagtcaagtcatttg |
892 |
Q |
| |
|
||||||| ||||||| ||||||| |||||||||||||||||| ||||||| || |||| ||||||||| ||||||||| |||||| | || |
|
|
| T |
12929891 |
tagttatgatgtgggtatagagagggaacatgcatttaaatactggtgtgtgggagagcaaattaaagtaaatatctt----------tcaagttaatta |
12929802 |
T |
|
| Q |
893 |
aacgaacagacagatcagaagcacggcacatgggagataattaatcacctttcgata--ttttgatgcaaaagtcatttattaattataca |
981 |
Q |
| |
|
|| |||||||| | |||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||| ||||| |||||| |
|
|
| T |
12929801 |
aatgaacagaccg---agaagcacgggacaagggagataattaatcacctttctataatttttgatgcaaaagtcattgattaaatataca |
12929714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 513; E-Value: 0
Query Start/End: Original strand, 7 - 724
Target Start/End: Complemental strand, 12947056 - 12946339
Alignment:
| Q |
7 |
attataaagacaagatggaatcttaccggaaaaattgttctcacccaaagctaaaaatgtcaagtgtttgcggcaacatatttcttgtggaatatctccc |
106 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| |||||| |
|
|
| T |
12947056 |
attataaagacaagaaggaatcttaccggacaaattgttctcattcaaagctaaaaatgtcaagtgtttgagaaaacatatttcttgtggaatgtctccc |
12946957 |
T |
|
| Q |
107 |
tcaaaattgttaagagcagctgatagacgtgttaagcatgaaagatttcctatgaatgaagggattcctccagttaaattgttatgcgcaacagtcatgg |
206 |
Q |
| |
|
||||||||||| || | || ||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||| | |||||||||||| | |
|
|
| T |
12946956 |
tcaaaattgttttcagaaactaatagacgtgttaagcttgaaagatttccaatgaatgaagggattcctccgattaaattgtttttcgcaacagtcattg |
12946857 |
T |
|
| Q |
207 |
cttgaagttttttcaaagagccgatttcagttggtattttaccaatgagatggttcccactcaaaaacaataatttgagattagaacaatatgtcaggtt |
306 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || ||||||||||||||||| |
|
|
| T |
12946856 |
cttgaaccttcttcaaagagccgatttcagttggtattttaccgatgagatggttcccactcaaaaacaaaaatttgagtttggaacaatatgtcaggtt |
12946757 |
T |
|
| Q |
307 |
tgtaggaatctcacctacaaaagaattattgctgagaaaaagttgctgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttg |
406 |
Q |
| |
|
|||||||||||||||| ||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12946756 |
tgtaggaatctcacctgcaaaagagttattgttgagaaaaagttgttgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttg |
12946657 |
T |
|
| Q |
407 |
tctccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgtt |
506 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| |
|
|
| T |
12946656 |
tctccaatgttgagtgttttcagaaaagtgagattggaaacatggggagataaagatccatgtaactgatatctttctagagtcaactgtgtaactcgtt |
12946557 |
T |
|
| Q |
507 |
catgcatggggctgcatgtgattccatgccacttgcaaaaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattcttt |
606 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
12946556 |
catgcatggggctgcatgtgattccatgccacttgcagaagtgaatggatgaattccaagattcaagagctttgtatgggtcactggaaattgattcttt |
12946457 |
T |
|
| Q |
607 |
gaatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccctaattttgtttggaccaaaccacattaaattgaaggtaagcnnnnnn |
706 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
12946456 |
gaatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgcccttattttgtttggaccaaaccacattaaatttaaggtaagcataaaa |
12946357 |
T |
|
| Q |
707 |
nggagatgaaggtataaa |
724 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
12946356 |
aggagatgaaggtataaa |
12946339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 545 - 985
Target Start/End: Complemental strand, 12955677 - 12955234
Alignment:
| Q |
545 |
aaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattctttgaatttgagcaatgccaaatgatcagtttggtttccta |
644 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12955677 |
aaatggatggaagaattccaagattcaagagcattgtatgggtcactagaaattgattctttgaatttgagcaatgccaaatgatcagtttggtttccta |
12955578 |
T |
|
| Q |
645 |
ttgcagccactgccctaattttgtttggaccaaaccacattaaattgaaggtaagcnnnnnnnggagatgaaggtataaaagtggaggtgacaacaaaga |
744 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12955577 |
ttgcagtcactgccgtaattttgtttggaccaaaccacattaaatttaaggtaagcaaaaaaaggagatgaaggtataaaagtggaggtgacaacaaaga |
12955478 |
T |
|
| Q |
745 |
aaaagacttcat-----------agagaa-ggaacatg-tatttagttttgtttgtgttctatagttattatgtgggaatagagaaggaacatgcattta |
831 |
Q |
| |
|
|||| ||||||| ||| || || ||| ||||||||||||||||||||| |||||||| ||||||| ||||||| |||||||||||||| |
|
|
| T |
12955477 |
aaaatacttcattttggtttagaagaaaatggtttatgctatttagttttgtttgtgttcgatagttatgatgtgggtatagagagggaacatgcattta |
12955378 |
T |
|
| Q |
832 |
aatattggtgtg-ggaagagaaaattaaagaaaatatcttcaagtgcaagtcaagtcatttgaacgaacagacagatcagaagcacggcacatgggagat |
930 |
Q |
| |
|
|||| ||||||| || |||| |||||||||||| |||||| |||||||| || ||||||||||| | |||||||| | ||||||||||| |
|
|
| T |
12955377 |
aatactggtgtgtgggagagcaaattaaagaaattatctt----------tcaagtcaattaaacgaacagaccg---agaagcaccggacatgggagat |
12955291 |
T |
|
| Q |
931 |
aattaatcacctttcgata--ttttgatgcaaaagtcatttattaattatacatgtt |
985 |
Q |
| |
|
||||||||||||||||||| |||| | |||||||||||| ||||| |||||||||| |
|
|
| T |
12955290 |
aattaatcacctttcgataatttttaaagcaaaagtcattgattaaatatacatgtt |
12955234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 771 - 860
Target Start/End: Complemental strand, 12946297 - 12946208
Alignment:
| Q |
771 |
tatttagttttgtttgtgttctatagttattatgtgggaatagagaaggaacatgcatttaaatattggtgtgggaagagaaaattaaag |
860 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||| ||||||| ||||||||| |||||||| |||||||||||||| ||||||||| |
|
|
| T |
12946297 |
tatttagttttgtttgtgttcgatagttatgatgtggatatagagagggaacatgcttttaaatactggtgtgggaagagcaaattaaag |
12946208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 902 - 985
Target Start/End: Complemental strand, 12946205 - 12946120
Alignment:
| Q |
902 |
acagatcagaagcacggcacatgggagataattaatcacctttcgata--ttttgatgcaaaagtcatttattaattatacatgtt |
985 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
12946205 |
acagaccagaagcacgggacatgggagataattaatcacctttctatattttttgatgcaaaagtcattgattaaatatacatgtt |
12946120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 771 - 904
Target Start/End: Complemental strand, 12897203 - 12897085
Alignment:
| Q |
771 |
tatttagttttgtttgtgttctatagttattatgtgggaatagagaaggaacatgcatttaaatattggtgtgggaagagaaaattaaagaaaatatctt |
870 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||||||||| | |||||||||||| |||||||| ||||| ||||||||||||||||||| |
|
|
| T |
12897203 |
tatttaattttgtttgtgttctataattattatgtgggaaaa-----------tgcatttaaatactggtgtggcaagagcaaattaaagaaaatatctt |
12897115 |
T |
|
| Q |
871 |
caagtgcaagtcaagtcatttgaacgaacagaca |
904 |
Q |
| |
|
| ||||||||||| ||||||||||||||| |
|
|
| T |
12897114 |
----tcaaagtcaagtcaattgaacgaacagaca |
12897085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 771 - 831
Target Start/End: Complemental strand, 12904822 - 12904762
Alignment:
| Q |
771 |
tatttagttttgtttgtgttctatagttattatgtgggaatagagaaggaacatgcattta |
831 |
Q |
| |
|
||||| ||||||||||||||| |||||||| ||||||||||||||| ||| |||||||||| |
|
|
| T |
12904822 |
tatttcgttttgtttgtgttcgatagttatgatgtgggaatagagagggaccatgcattta |
12904762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 218; Significance: 1e-119; HSPs: 24)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 143 - 756
Target Start/End: Original strand, 10718828 - 10719444
Alignment:
| Q |
143 |
catgaaagatttcctatgaatgaagggattcctccagttaaattgttatgcgcaacagtcatggcttgaagttttttcaaagagccgatttcagttggta |
242 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||| | ||| | || |||||| ||||||||||||| | ||| ||||| |
|
|
| T |
10718828 |
catgaaagatttcccatgaatgaagggattcctccagttaaattgttttttccaatggccagaatttgaagccttttcaaagagccaacttctactggta |
10718927 |
T |
|
| Q |
243 |
ttttaccaatgagatggttcccactcaaaaacaataatttgagattagaacaatatgtcaggtttgtaggaatctcacctacaaaagaattattgctgag |
342 |
Q |
| |
|
||| |||||||| | ||||| ||| | || ||||||||| || ||||| ||||||||||||||||| | |||| ||||||| |||||| | || |
|
|
| T |
10718928 |
atttgccaatgagcttattcccttgcaaggataactctttgagattggagcaatacgtcaggtttgtaggaattttacctgcaaaagagttattgttaag |
10719027 |
T |
|
| Q |
343 |
aaaaagttgctgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttgtctccaatgtcgagagttttcagaaaagtgagattg |
442 |
Q |
| |
|
| ||||||| ||||| |||||||||| |||||||| ||||||||||||||||||||| |||||| | || | ||| || ||| ||| | ||||||| |
|
|
| T |
10719028 |
ataaagttgttgcaattgtagcaacttgcccaactcatgtggaatttctccaaagaagctgttgtttataagattgaggtttatcaaaaaggagagattg |
10719127 |
T |
|
| Q |
443 |
caaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccatgccacttgc |
542 |
Q |
| |
|
| |||||||||||||||||||||||||||| |||||| | |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10719128 |
ccaacatggggagataaagatccatgtaacagatatcctcctaggttcaactctgtaactctttcatgcatggggctgcatgtgattccatgccacttgc |
10719227 |
T |
|
| Q |
543 |
aaaaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattctttgaatttgagcaatgccaaatgatcagtttggtttcc |
642 |
Q |
| |
|
| || ||||||||||||||||||||||||||||||| ||||| ||||| | ||| |||||||||||||||||||||| |||||||| |||||||| || |
|
|
| T |
10719228 |
agaagtggatggaagaattccaagattcaagagcttcatatggatcactggttattcattctttgaatttgagcaatgctaaatgatctgtttggttacc |
10719327 |
T |
|
| Q |
643 |
tattgcagccactgccctaattttgtttggaccaaaccac---attaaattgaaggtaagcnnnnnnnggagatgaaggtataaaagtggaggtgacaac |
739 |
Q |
| |
|
|| ||||||||||||| ||||||||||| ||||||||| |||||||| ||||||| | ||||||||||||||||||| || ||||||| |
|
|
| T |
10719328 |
taatgcagccactgccacaattttgtttgtgccaaaccacattattaaatttaaggtaaaaagaaaaagaagatgaaggtataaaagtgtagatgacaac |
10719427 |
T |
|
| Q |
740 |
aaagaaaaagacttcat |
756 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
10719428 |
aaagaaaaagacttcat |
10719444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 145 - 756
Target Start/End: Original strand, 10742634 - 10743245
Alignment:
| Q |
145 |
tgaaagatttcctatgaatgaagggattcctccagttaaattgttatgcgcaacagtcatggcttgaagttttttcaaagagccgatttcagttggtatt |
244 |
Q |
| |
|
||||||||| |||||| |||||| ||||||||||||||||||||||| | |||| ||| | |||||||||||||||| |||| |||||| |||||||| |
|
|
| T |
10742634 |
tgaaagattccctatggatgaagagattcctccagttaaattgttattccaaacactcaatgattgaagttttttcaaatagccaatttcaattggtatt |
10742733 |
T |
|
| Q |
245 |
ttaccaatgagatggttcccactcaaaaacaataatttgagattagaacaatatgtcaggtttgtaggaatctcacctacaaaagaattattgctgagaa |
344 |
Q |
| |
|
|| ||||| | | |||||| |||| | | ||| ||||| || |||||||||| |||||||||||| |||||| ||||||| ||||| | |||| |
|
|
| T |
10742734 |
ttgccaatcaacttgttccctgccaaagttatgactttcagatttgagcaatatgtcaagtttgtaggaatttcacctgcaaaagagttattagtaagaa |
10742833 |
T |
|
| Q |
345 |
aaagttgctgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttgtctccaatgtcgagagttttcagaaaagtgagattgca |
444 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| |||||| | ||| | ||| || |||||||||||||||||| |
|
|
| T |
10742834 |
aaagttgttgcaattgtagcaactgacccaactcttgtggaatttctccatagaatgtgttgttttcaagtttgagttttatcagaaaagtgagattgcc |
10742933 |
T |
|
| Q |
445 |
aacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccatgccacttgcaa |
544 |
Q |
| |
|
||||||||| |||||| ||| ||||| |||| ||| |||| ||||||| |||||| || |||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
10742934 |
aacatggggggataaacgtccttgtaagcgataacttcctaggtccaactctataactctttgatgcatggggttgcatgtgattccataccacttgcag |
10743033 |
T |
|
| Q |
545 |
aaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattctttgaatttgagcaatgccaaatgatcagtttggtttccta |
644 |
Q |
| |
|
|| |||||||||||||||||||| ||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
10743034 |
aagtggatggaagaattccaagactcaagagctttatatggatcacttgatattgattctttgaatttgagcaatgccaaatgatctgattggtttccta |
10743133 |
T |
|
| Q |
645 |
ttgcagccactgccctaattttgtttggaccaaaccacattaaattgaaggtaagcnnnnnnnggagatgaaggtataaaagtggaggtgacaacaaaga |
744 |
Q |
| |
|
| |||||||||| |||||||||| |||||| ||||||||| ||||||| | ||||||||||||||||||| || ||||| |||||| |
|
|
| T |
10743134 |
attgagccactgccaccattttgtttgtgccaaactgcattaaattcaaggtaaaaagaaaaagaagatgaaggtataaaagtgtagatgacaccaaaga |
10743233 |
T |
|
| Q |
745 |
aaaagacttcat |
756 |
Q |
| |
|
|||||||||||| |
|
|
| T |
10743234 |
aaaagacttcat |
10743245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 138 - 698
Target Start/End: Original strand, 10748940 - 10749500
Alignment:
| Q |
138 |
ttaagcatgaaagatttcctatgaatgaagggattcctccagttaaattgttatgcgcaacagtcatggcttgaagttttttcaaagagccgatttcagt |
237 |
Q |
| |
|
||||| |||||||||| |||||||||||||| | ||| |||||||||||||| | |||| | || |||||| |||||||||||||| |||||| | |
|
|
| T |
10748940 |
ttaaggatgaaagattccctatgaatgaaggaaatccaccagttaaattgtttccccaaacatttattagttgaagctttttcaaagagccaatttcaat |
10749039 |
T |
|
| Q |
238 |
tggtattttaccaatgagatggttcccactcaaaaacaataatttgagattagaacaatatgtcaggtttgtaggaatctcacctacaaaagaattattg |
337 |
Q |
| |
|
||||||||| ||||| | || |||||| | || | || ||||||||| || |||||||||| ||||| |||||| || ||| | || || |||||| |
|
|
| T |
10749040 |
tggtattttgccaatcacattgttccctcccacatttaagcctttgagattggagcaatatgtcaagtttgaaggaatttctcctgcgaacgagttattg |
10749139 |
T |
|
| Q |
338 |
ctgagaaaaagttgctgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttgtctccaatgtcgagagttttcagaaaagtga |
437 |
Q |
| |
|
||||| |||||| ||||| ||||||||| |||||||||| | ||| |||||||||| ||||| |||| |||||||| ||| || | |||||||||| |
|
|
| T |
10749140 |
atgagatcaagttgttgcaattgtagcaaccgacccaactcttctgggatttctccaaggaagtcattgtttccaatgtttagatttgtgagaaaagtga |
10749239 |
T |
|
| Q |
438 |
gattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccatgcca |
537 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| ||||||| || || | |||||| |||||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
10749240 |
gattgccaacatggggtgataaagatccatgtaaatgatatccttctaagttcaactttgtaactctttcatgcatgggtttgcatgtgattccatgcca |
10749339 |
T |
|
| Q |
538 |
cttgcaaaaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattctttgaatttgagcaatgccaaatgatcagtttgg |
637 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||| | ||||||||| || ||||||||||| |||||| |||||||||||||||| |||||| |
|
|
| T |
10749340 |
cttgcagaagtggatggaagaattccaagattcaagagctttatttgggtcactcgatattgattctttaaatttgtgcaatgccaaatgatctgtttgg |
10749439 |
T |
|
| Q |
638 |
tttcctattgcagccactgccctaattttgtttggaccaaaccacattaaattgaaggtaa |
698 |
Q |
| |
|
||||||| ||||||||||||| ||||||||| |||||| |||||||||| ||||||| |
|
|
| T |
10749440 |
tttcctaatgcagccactgccacggttttgtttgtgccaaacgacattaaatttaaggtaa |
10749500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 209 - 751
Target Start/End: Complemental strand, 10563240 - 10562698
Alignment:
| Q |
209 |
tgaagttttttcaaagagccgatttcagttggtattttaccaatgagatggttcccactcaaaaacaataatttgagattagaacaatatgtcaggtttg |
308 |
Q |
| |
|
||||| |||||||||||||| |||||| |||||||||| ||||| | | |||||| | ||||| ||| | ||||||| || |||||||||| ||||| |
|
|
| T |
10563240 |
tgaagctttttcaaagagccaatttcaattggtattttcccaatcaatttgttccctcccaaaatcaagtctatgagattggagcaatatgtcaagtttg |
10563141 |
T |
|
| Q |
309 |
taggaatctcacctacaaaagaattattgctgagaaaaagttgctgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttgtc |
408 |
Q |
| |
|
||||||| || |||||||| || ||||| |||| |||| || |||| ||||||||||||||||||||| |||| ||||||||| | || | |||| |
|
|
| T |
10563140 |
taggaatttctcctacaaacgagttattaaggagataaaggtgttgcagttgtagcaactgacccaactccggtgggatttctccagaaaaactattgtt |
10563041 |
T |
|
| Q |
409 |
tccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgttca |
508 |
Q |
| |
|
||||| ||||||| || ||| ||| |||||||||| ||||| ||||||||||||||||||||| |||| ||| ||||| |||||||| |||||| || | |
|
|
| T |
10563040 |
tccaaggtcgagatttatcaaaaaggtgagattgccaacatagggagataaagatccatgtaagtgattacttcttaggttcaactctataactctttga |
10562941 |
T |
|
| Q |
509 |
tgcatggggctgcatgtgattccatgccacttgcaaaaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattctttga |
608 |
Q |
| |
|
||||||||| |||| |||||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||| |
|
|
| T |
10562940 |
tgcatggggttgcaagtgattccctgccacttgcagaagtggatggaagaattccaagattcaagagcattgtatggatcactggatattgattctttga |
10562841 |
T |
|
| Q |
609 |
atttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccctaattttgtttggaccaaaccacattaaattgaaggtaagcnnnnnnng |
708 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| ||||||| | |
|
|
| T |
10562840 |
atttgagcaatgctaaatgatctgtttggtttcctaatgcagccactgccaccattttgtttgtggtaaaccacattaaatttaaggtaaaaagaaaaag |
10562741 |
T |
|
| Q |
709 |
gagatgaaggtataaaagtggaggtgacaacaaagaaaaagac |
751 |
Q |
| |
|
|||||||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
10562740 |
aagatgaaggtataaaagtatagatgacaacgaagaaaaagac |
10562698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 167; E-Value: 6e-89
Query Start/End: Original strand, 209 - 687
Target Start/End: Original strand, 10765111 - 10765589
Alignment:
| Q |
209 |
tgaagttttttcaaagagccgatttcagttggtattttaccaatgagatggttcccactcaaaaacaataatttgagattagaacaatatgtcaggtttg |
308 |
Q |
| |
|
||||| |||||||||||||| |||||| || ||||||| || | | | |||||| | ||||| ||| | ||||||| || ||||| |||| |||| |
|
|
| T |
10765111 |
tgaaggtttttcaaagagccaatttcaattagtattttccctgtcaatttgttccctcccaaaatcaagtctatgagattggagcaatacgtcaagttta |
10765210 |
T |
|
| Q |
309 |
taggaatctcacctacaaaagaattattgctgagaaaaagttgctgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttgtc |
408 |
Q |
| |
|
||||||| || ||| ||| || ||||| |||| ||||||| |||| |||||||||||||| ||||||||||||||||||||| | || | |||| |
|
|
| T |
10765211 |
taggaatttctcctgtaaacgagttattaaggagataaagttgttgcagttgtagcaactgaccgaactcctgtggaatttctccagaaaaactattgtt |
10765310 |
T |
|
| Q |
409 |
tccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgttca |
508 |
Q |
| |
|
| || || |||| || |||||||||||||||| | || || ||||||||||||||||||||||||||||| | |||| ||||||||||||| | || | |
|
|
| T |
10765311 |
ttgaaggttgagatttatcagaaaagtgagattaccaagatagggagataaagatccatgtaactgatatcctgctaggttcaactctgtaaccctttga |
10765410 |
T |
|
| Q |
509 |
tgcatggggctgcatgtgattccatgccacttgcaaaaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattctttga |
608 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||| |
|
|
| T |
10765411 |
tgcatgaggctgcatgtgattccatgccactttcaaaagtggatggaagaattccaagattcaagagctttatatggatcacttgatattgattctttga |
10765510 |
T |
|
| Q |
609 |
atttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccctaattttgtttggaccaaaccacattaa |
687 |
Q |
| |
|
|||||||||||||||| ||||| | ||||||||||| | |||||||||| |||||||||| |||||||||||||| |
|
|
| T |
10765511 |
atttgagcaatgccaattgatctgattggtttcctaattgagccactgccaccattttgtttgtgccaaaccacattaa |
10765589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 137 - 644
Target Start/End: Original strand, 11049796 - 11050303
Alignment:
| Q |
137 |
gttaagcatgaaagatttcctatgaatgaagggattcctccagttaaattgttatgcgcaacagtcatggcttgaagttttttcaaagagccgatttcag |
236 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||||||||||| || || | | || | || | ||||||||||||||||||||| |||||| |
|
|
| T |
11049796 |
gttaagcttgaaagattccctatgaatgaagggattcctccagttaatttatttttccaaatggccaatgattgaagttttttcaaagagccaatttcat |
11049895 |
T |
|
| Q |
237 |
ttggtattttaccaatgagatggttcccactcaaaaacaataatttgagattagaacaatatgtcaggtttgtaggaatctcacctacaaaagaattatt |
336 |
Q |
| |
|
||||||| || ||||| | || |||||| | |||| |||| ||| ||||| || |||| ||| |||||||||||||| || ||| ||| ||| ||||| |
|
|
| T |
11049896 |
ttggtatcttgccaattaaattgttccctcccaaatacaagtctttaagattggagcaatgtgtgaggtttgtaggaatttctcctgcaagagagttatt |
11049995 |
T |
|
| Q |
337 |
gctgagaaaaagttgctgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttgtctccaatgtcgagagttttcagaaaagtg |
436 |
Q |
| |
|
|||||| |||||||| | ||| ||||||||| |||||||||| ||||||||||||||| ||||| |||||| | | || | ||| ||||||| |
|
|
| T |
11049996 |
gctgagtaaaagttgttccaattgtagcaaccgacccaactcttgtggaatttctccatagaagctgttgttcatgagattgaattctgtcaaaaaagtg |
11050095 |
T |
|
| Q |
437 |
agattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccatgcc |
536 |
Q |
| |
|
||||||| ||||| ||| |||| |||||||| |||||||||| || |||| |||||| |||||||| || ||||||| ||||||||||||||||||||| |
|
|
| T |
11050096 |
agattgccaacatagggtgatattgatccatgcaactgatatccttctaggttcaactttgtaactctttgatgcatgaggctgcatgtgattccatgcc |
11050195 |
T |
|
| Q |
537 |
acttgcaaaaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattctttgaatttgagcaatgccaaatgatcagtttg |
636 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| | |||||||| | |||| |||||||||||| | |||||| |||||||| ||||| |
|
|
| T |
11050196 |
acttgcagaaatggatggaagaattccaagattcaagagctccatttgggtcacggtatattgtttctttgaatttaatcaatgcaaaatgatctgtttg |
11050295 |
T |
|
| Q |
637 |
gtttccta |
644 |
Q |
| |
|
|||||||| |
|
|
| T |
11050296 |
gtttccta |
11050303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 82 - 698
Target Start/End: Complemental strand, 10610050 - 10609437
Alignment:
| Q |
82 |
acatatttcttgtggaatatctccctcaaaattgttaagagcagctgatagacgtgttaagcatgaaagatttcctatgaatgaagggattcctccagtt |
181 |
Q |
| |
|
|||| |||||||||||||||| || || || ||||| || | |||| | ||| ||||||||||||||||| |||| ||||||||| |||||||| ||| |
|
|
| T |
10610050 |
acatgtttcttgtggaatatccccttctaagttgtttgaagtaactgaaaaacgcgttaagcatgaaagattccctacgaatgaaggaattcctccggtt |
10609951 |
T |
|
| Q |
182 |
aaattgttatgcgcaacagtcatggcttgaagttttttcaaagagccgatttcagttggtattttaccaatgagatggttcccactcaaaaacaataatt |
281 |
Q |
| |
|
|| ||||| | | || |||| |||||| |||||||||||||| |||||| | |||||||| ||||| | || ||| || | |||| || || |
|
|
| T |
10609950 |
aatttgtttttccaaatggtcacatattgaagctttttcaaagagccaatttcaatcggtattttgccaatcaaattgtttcctcccaaacgtaactctt |
10609851 |
T |
|
| Q |
282 |
tgagattagaacaatatgtcaggtttgtaggaatctcacctacaaaagaattattgctgagaaaaagttgctgcaaatgtagcaactgacccaactcctg |
381 |
Q |
| |
|
||||||| || |||| |||||||||||||||||| || ||| ||||||| |||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
10609850 |
tgagattggagcaatgtgtcaggtttgtaggaatttctcctgcaaaagagttattgatgagataaagttgttgcaattgtagcaactgacccaactcctg |
10609751 |
T |
|
| Q |
382 |
tggaatttctccaaagaagttgttg-tctccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatct |
480 |
Q |
| |
|
|| ||| |||| ||||| ||||| || | || || ||| | |||||||| ||||||| |||| || |||| |||||||| |||||||||| |
|
|
| T |
10609750 |
cgggattgttccatagaagctgttgttcatgagattcaag-gttgtaagaaaagtaagattgcctacatatggtgatatggatccatgcaactgatatcc |
10609652 |
T |
|
| Q |
481 |
ttttaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccatgccacttgcaaaaatggatggaagaattccaagattc-aagagcttt |
579 |
Q |
| |
|
|| ||| |||||||| |||||| || ||||| | ||||||||||| |||| ||||||| || |||||||||||| |||||||||| || |||| || |
|
|
| T |
10609651 |
ttcaaggttcaactctataactctttgttgcatagagctgcatgtgactccacgccacttacataaatggatggaaaaattccaagaatctaaga-ctcc |
10609553 |
T |
|
| Q |
580 |
gtatgggtcactagaaattgattctttgaatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccctaattttgtttggaccaaac |
679 |
Q |
| |
|
| ||| ||| | || ||||||||||||||||| ||||||| ||||| ||||||||||||||||| | ||||||||| | ||||||||| ||||||| |
|
|
| T |
10609552 |
atttggatcattggatattgattctttgaatttaagcaatgacaaataatcagtttggtttcctaat---gccactgccacagttttgtttgtaccaaac |
10609456 |
T |
|
| Q |
680 |
cacattaaattgaaggtaa |
698 |
Q |
| |
|
||||||| ||| ||||||| |
|
|
| T |
10609455 |
cacattatatttaaggtaa |
10609437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 10764891 - 10764989
Alignment:
| Q |
7 |
attataaagacaagatggaatcttaccggaaaaattgttctcacccaaagctaaaaatgtcaagtgtttgcggcaacatatttcttgtggaatatctcc |
105 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||||||||| || |||| |||||||||||||| |||| ||| |||||||||||||||||||||||| |
|
|
| T |
10764891 |
attataaagacaagatggaatcttaccagacaaattgttctcgccaaaagataaaaatgtcaagtttttgaggcgacatatttcttgtggaatatctcc |
10764989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 496 - 644
Target Start/End: Original strand, 9838611 - 9838759
Alignment:
| Q |
496 |
tgtaactcgttcatgcatggggctgcatgtgattccatgccacttgcaaaaatggatggaagaattccaagattc-aagagctttgtatgggtcactaga |
594 |
Q |
| |
|
|||||||| || |||||||||| ||||||||||||||||||| ||||| || ||||| |||||||||||||| || |||| || | ||||||||| || |
|
|
| T |
9838611 |
tgtaactctttgatgcatggggttgcatgtgattccatgccagttgcagaagtggatagaagaattccaagaatctaaga-ctccatttgggtcactgga |
9838709 |
T |
|
| Q |
595 |
aattgattctttgaatttgagcaatgccaaatgatcagtttggtttccta |
644 |
Q |
| |
|
|||||||||||||||| ||||||||| | |||||||||||||||||||| |
|
|
| T |
9838710 |
tattgattctttgaattggagcaatgcaagatgatcagtttggtttccta |
9838759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 65 - 647
Target Start/End: Complemental strand, 10557277 - 10556695
Alignment:
| Q |
65 |
gtcaagtgtttgcggcaacatatttcttgtggaatatctccctcaaaattgttaagagcagctgatagacgtgttaagcatgaaagatttcctatgaatg |
164 |
Q |
| |
|
||||||||||| ||| |||||||||||| |||||||||||||| || |||||| ||| | || ||| ||||||| ||||||||| |||||||||| |
|
|
| T |
10557277 |
gtcaagtgttttaggcgacatatttcttggggaatatctccctctaagttgttacgagaaatggaaagagttgttaagactgaaagattacctatgaatg |
10557178 |
T |
|
| Q |
165 |
aagggattcctccagttaaattgttatgcgcaacagtcatggcttgaagttttttcaaagagccgatttcagttggtattttaccaatgagatggttccc |
264 |
Q |
| |
|
|||| |||||| | ||| |||| ||||| ||| ||||||| |||| | |||||| |||||| |||||||||| || || | || ||||| |
|
|
| T |
10557177 |
gtgggactcctccgatcaaactgtttcttccaacattcaattcttgaagcttttgaagagagcctatttcaattggtatttttccgatcaaattattccc |
10557078 |
T |
|
| Q |
265 |
actcaaaaacaataatttgagattagaacaatatgtcaggtttgtaggaatctcacctacaaaagaattattgctgagaaaaagttgctgcaaatgtagc |
364 |
Q |
| |
|
|||||| | || |||| || || |||||| ||||| |||||||||||| || || || || |||||| |||| | |||| ||| || |||| | |
|
|
| T |
10557077 |
actcaaggataagtatttaaggttgaaacaatttgtcaagtttgtaggaatttctccagagaatgagttattggagagatagagttcctgtaattgtaac |
10556978 |
T |
|
| Q |
365 |
aactgacccaactcctgtggaatttctccaaagaagttgttgtctccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaagatc |
464 |
Q |
| |
|
|||||||||||||| || || |||| |||| |||| ||||||||| ||| || || | | |||||||| |||||| | |||| | |||||| |||| |
|
|
| T |
10556977 |
aactgacccaactcttgggggatttttccagagaatttgttgtctgcaaggttgacgtgtctgagaaaagtaagattggcagcatgagaagataaggatc |
10556878 |
T |
|
| Q |
465 |
catgtaactgatatctttttaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccatgccacttgcaaaaatggatggaagaattcca |
564 |
Q |
| |
|
|||| |||| ||||| || ||||||| ||||||| || |||||||| | ||||||||||||||| ||| |||||||||||||| ||| |||||| |
|
|
| T |
10556877 |
catgcaacttatatccaggtaacttcaactcagtaactctttgatgcatggtgttgcatgtgattccataccagttgcaaaaatggatagaaccattcca |
10556778 |
T |
|
| Q |
565 |
agattcaagagctttgtatgggtcactagaaattgattctttgaatttgagcaatgccaaatgatcagtttggtttcctattg |
647 |
Q |
| |
|
||| ||||| | | | ||||||| | ||||| ||| || || |||||||||| ||||| |||| | ||||||||||||| |
|
|
| T |
10556777 |
agaatcaaggattctatgtgggtcattggaaataaatttcttaaacttgagcaatgtcaaataatcactctggtttcctattg |
10556695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 581 - 687
Target Start/End: Original strand, 10590795 - 10590898
Alignment:
| Q |
581 |
tatgggtcactagaaattgattctttgaatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccctaattttgtttggaccaaacc |
680 |
Q |
| |
|
|||||||||||||| ||| ||| ||||||| |||||||||||||||||| ||||||||||||| | ||||||||| | || ||||||| ||||||| |
|
|
| T |
10590795 |
tatgggtcactagatattaattgcttgaattggagcaatgccaaatgatcggtttggtttcctagt---gccactgccacagttctgtttgggccaaacc |
10590891 |
T |
|
| Q |
681 |
acattaa |
687 |
Q |
| |
|
||||||| |
|
|
| T |
10590892 |
acattaa |
10590898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 710 - 756
Target Start/End: Original strand, 10757626 - 10757672
Alignment:
| Q |
710 |
agatgaaggtataaaagtggaggtgacaacaaagaaaaagacttcat |
756 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10757626 |
agatgaaggtataaaagtgtaggtgacaacaaagaaaaagacttcat |
10757672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 428 - 546
Target Start/End: Original strand, 19608080 - 19608198
Alignment:
| Q |
428 |
agaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgttcatgcatggggctgcatgtga |
527 |
Q |
| |
|
||||||| |||||| | || ||| | ||||| |||||||| || | ||||| || |||| |||| ||| |||||| || |||||||||||||||||||| |
|
|
| T |
19608080 |
agaaaagagagattaccaatatgagtagatattgatccatgcaattcatatccttgtaggttcaattctataactctttgatgcatggggctgcatgtga |
19608179 |
T |
|
| Q |
528 |
ttccatgccacttgcaaaa |
546 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
19608180 |
ttccatgccaattgcaaaa |
19608198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 519 - 644
Target Start/End: Complemental strand, 10548706 - 10548581
Alignment:
| Q |
519 |
tgcatgtgattccatgccacttgcaaaaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattctttgaatttgagcaa |
618 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||| ||| ||||||||| ||||| | | | ||||||||| | || ||||| |||||||| ||||| |
|
|
| T |
10548706 |
tgcacgtgattccatgccagttgcaaaaatggatagaaccattccaagaatcaagcattctatgtgggtcactggttatagattccttgaatttaagcaa |
10548607 |
T |
|
| Q |
619 |
tgccaaatgatcagtttggtttccta |
644 |
Q |
| |
|
|| | |||||||||||||||||||| |
|
|
| T |
10548606 |
tgatagatgatcagtttggtttccta |
10548581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 430 - 543
Target Start/End: Complemental strand, 7190994 - 7190881
Alignment:
| Q |
430 |
aaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgttcatgcatggggctgcatgtgatt |
529 |
Q |
| |
|
||||| |||||||| |||||||||||||| ||||||| | |||||||| || | | | ||||| | ||||| || ||||||||| |||||||||||| |
|
|
| T |
7190994 |
aaaagagagattgccaacatggggagatatcaatccatgcagctgatatccttccaagtttaactcggcaactctttgatgcatgggactgcatgtgatt |
7190895 |
T |
|
| Q |
530 |
ccatgccacttgca |
543 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
7190894 |
ccataccacttgca |
7190881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 581 - 644
Target Start/End: Complemental strand, 10598930 - 10598867
Alignment:
| Q |
581 |
tatgggtcactagaaattgattctttgaatttgagcaatgccaaatgatcagtttggtttccta |
644 |
Q |
| |
|
|||||||||||||| | | ||| ||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
10598930 |
tatgggtcactagatactaattggttgaattggagcaaagccaaatgatcagtttggtttccta |
10598867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 710 - 756
Target Start/End: Original strand, 10765621 - 10765667
Alignment:
| Q |
710 |
agatgaaggtataaaagtggaggtgacaacaaagaaaaagacttcat |
756 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||||||| ||||| |
|
|
| T |
10765621 |
agatgaaggtataaaaatgtaggtgacaacaaagaaaaagatttcat |
10765667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 10549133 - 10549097
Alignment:
| Q |
82 |
acatatttcttgtggaatatctccctcaaaattgtta |
118 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10549133 |
acatatttcttgtggaatatctccctccaaattgtta |
10549097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 10563310 - 10563259
Alignment:
| Q |
139 |
taagcatgaaagatttcctatgaatgaagggattcctccagttaaattgtta |
190 |
Q |
| |
|
|||| ||||||| || |||||| |||||||||| |||||||||||||||||| |
|
|
| T |
10563310 |
taaggatgaaaggttccctatggatgaagggatccctccagttaaattgtta |
10563259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 643
Target Start/End: Complemental strand, 10578921 - 10578786
Alignment:
| Q |
508 |
atgcatggggctgcatgtgattccatgccacttgcaaaaatggatggaagaattccaagattcaagagctttgtatgggtcactagaaattgattctttg |
607 |
Q |
| |
|
|||| |||| |||||| ||||||| |||| |||||||| ||| | |||| ||||||||| || ||| ||||| |||||||| ||||||| ||| |
|
|
| T |
10578921 |
atgcttgggactgcatacgattccaggccatttgcaaaagtgggttgaagcattccaagaatctagaataccatatggatcactagatattgattgcttg |
10578822 |
T |
|
| Q |
608 |
aatttgagcaatgccaaatgatcagtttggtttcct |
643 |
Q |
| |
|
|||| |||||| || |||||||| |||||||||||| |
|
|
| T |
10578821 |
aattggagcaaagcgaaatgatcggtttggtttcct |
10578786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 640
Target Start/End: Complemental strand, 10592764 - 10592729
Alignment:
| Q |
605 |
ttgaatttgagcaatgccaaatgatcagtttggttt |
640 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10592764 |
ttgaatttgagcaatgccagatgatcagtttggttt |
10592729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 332 - 399
Target Start/End: Complemental strand, 10593849 - 10593782
Alignment:
| Q |
332 |
ttattgctgagaaaaagttgctgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaa |
399 |
Q |
| |
|
||||| |||||||||||| |||||| |||| ||| || ||||| ||||||||||||| ||||||||| |
|
|
| T |
10593849 |
ttattactgagaaaaagtccctgcaattgtaacaattgccccaattcctgtggaatttttccaaagaa |
10593782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 644
Target Start/End: Complemental strand, 10602570 - 10602531
Alignment:
| Q |
605 |
ttgaatttgagcaatgccaaatgatcagtttggtttccta |
644 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
10602570 |
ttgaattggagcaaagccaaatgatcagtttggtttccta |
10602531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 581 - 615
Target Start/End: Original strand, 10654570 - 10654604
Alignment:
| Q |
581 |
tatgggtcactagaaattgattctttgaatttgag |
615 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10654570 |
tatgggtcattagaaattgattctttgaatttgag |
10654604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 27725990 - 27726035
Alignment:
| Q |
144 |
atgaaagatttcctatgaatgaagggattcctccagttaaattgtt |
189 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||| || |||||||| |
|
|
| T |
27725990 |
atgaaagatttcctataaatgaagggatttctcctgtcaaattgtt |
27726035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University