View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5684-Insertion-8 (Length: 301)
Name: NF5684-Insertion-8
Description: NF5684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5684-Insertion-8 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 8 - 301
Target Start/End: Complemental strand, 54567652 - 54567359
Alignment:
| Q |
8 |
aatacacctcaaatgatttcaaagctttgtgtgaattatatggagtccaaaacgaggttactgagagttgaaatatgacaattctcaatatggcaataag |
107 |
Q |
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| T |
54567652 |
aatacacctcaaatgatttcaaagctttgtgtgaatcatatggagtccaaaacgaggttactgagagttgaaatatgacaattctcaatatggcaataag |
54567553 |
T |
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| Q |
108 |
catgttgagaaataaagctttgccatgttaattttggggagaagtagttgctcttgcattgtacatttcgaacaagtgtcctacattgaggctacatggt |
207 |
Q |
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| T |
54567552 |
catgttgagaaataaagctttgccatgttaattttggggagaagtagttgctcttgcattgtacatttcgaacaagtgtcctacatagaggctacatggt |
54567453 |
T |
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| Q |
208 |
acaattctaggtaaggtgtggaatgaaaataaaataagtcttcagtgattcaattgaagttgtttggatagataagttataagcatgtaccaga |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
54567452 |
acaattctaggtaaggtgtggaatgaaaataaaataagtcttcagtgattcaattgaagttgtttggataggtaagttataagcatgtaccaga |
54567359 |
T |
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