View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5684_low_33 (Length: 264)
Name: NF5684_low_33
Description: NF5684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5684_low_33 |
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Alignment Details
Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 7564202 - 7563953
Alignment:
| Q |
1 |
aaataaattaattgaatgtaatcatacgtgttggtgctacctaatttgagaactatcttggttacctagttcatgtgttacacaagacatgccaagccaa |
100 |
Q |
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| T |
7564202 |
aaataaattaattgaatgtaatcatacgtgttggtgctacctaatttgagaactatcttggttacctggttcatgtgttacacaagacatgccaagccaa |
7564103 |
T |
|
| Q |
101 |
taaccataacaccgtctatttggttaagtcggtcattgcctatcgacataacatcatctaacacagtgttcctctcc-attgttccctttgcctcttagc |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
7564102 |
taaccataacaccgtctatttggttaagtcggtcattgcctatcgacataacatcatctaacacagtgttcctctccaattgttccctttgcctcttagc |
7564003 |
T |
|
| Q |
200 |
tttaaatacacttcttgtag-tttttgtcattgttacttgggaaaattca |
248 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
7564002 |
tttaaatacacttcttgtagttttttgtcattgttacttgggaaaattca |
7563953 |
T |
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