View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5687-Insertion-4 (Length: 695)

Name: NF5687-Insertion-4
Description: NF5687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5687-Insertion-4
NF5687-Insertion-4
[»] chr1 (36 HSPs)
chr1 (8-695)||(7857490-7858166)
chr1 (202-692)||(24658770-24659259)
chr1 (202-695)||(46814217-46814709)
chr1 (210-589)||(27031601-27031977)
chr1 (269-668)||(46692636-46693038)
chr1 (273-667)||(5389243-5389639)
chr1 (269-670)||(24449747-24450151)
chr1 (363-670)||(24684388-24684697)
chr1 (272-670)||(41920313-41920718)
chr1 (269-561)||(5459133-5459425)
chr1 (351-670)||(30685802-30686125)
chr1 (303-670)||(31585610-31585981)
chr1 (474-629)||(9313311-9313467)
chr1 (474-668)||(17033449-17033645)
chr1 (480-570)||(4651743-4651833)
chr1 (474-668)||(38544760-38544955)
chr1 (457-667)||(20113526-20113739)
chr1 (351-549)||(6583117-6583313)
chr1 (474-570)||(19598599-19598695)
chr1 (401-570)||(27102153-27102321)
chr1 (352-439)||(31290921-31291008)
chr1 (480-535)||(15840940-15840995)
chr1 (474-668)||(50589229-50589423)
chr1 (480-546)||(34774858-34774923)
chr1 (269-439)||(32882465-32882630)
chr1 (482-549)||(32864591-32864658)
chr1 (614-695)||(27032025-27032106)
chr1 (480-549)||(40933847-40933916)
chr1 (480-516)||(30655577-30655613)
chr1 (458-536)||(2877634-2877711)
chr1 (609-658)||(10785490-10785540)
chr1 (209-325)||(30685683-30685797)
chr1 (480-570)||(42374126-42374216)
chr1 (489-534)||(27905411-27905456)
chr1 (474-668)||(16147418-16147614)
chr1 (484-516)||(38564918-38564950)
[»] chr3 (38 HSPs)
chr3 (232-672)||(23328131-23328569)
chr3 (202-695)||(40023321-40023815)
chr3 (217-549)||(45398780-45399112)
chr3 (269-676)||(20611637-20612046)
chr3 (273-667)||(19176366-19176764)
chr3 (269-670)||(2392323-2392727)
chr3 (217-534)||(43012374-43012690)
chr3 (272-668)||(34475576-34475973)
chr3 (285-482)||(21342586-21342784)
chr3 (273-570)||(9583876-9584171)
chr3 (272-562)||(45163824-45164116)
chr3 (275-518)||(17550972-17551210)
chr3 (269-670)||(2394087-2394474)
chr3 (269-502)||(47235729-47235962)
chr3 (354-658)||(25647557-25647863)
chr3 (269-547)||(14879421-14879701)
chr3 (272-551)||(31482866-31483144)
chr3 (474-629)||(37123285-37123441)
chr3 (269-468)||(53247965-53248165)
chr3 (483-570)||(30935421-30935508)
chr3 (464-572)||(14193901-14194009)
chr3 (270-373)||(30352259-30352359)
chr3 (480-630)||(823463-823614)
chr3 (480-570)||(47945668-47945759)
chr3 (269-346)||(7105028-7105105)
chr3 (474-570)||(14755287-14755381)
chr3 (201-276)||(50305325-50305401)
chr3 (474-518)||(39021298-39021342)
chr3 (484-523)||(20710740-20710779)
chr3 (474-548)||(5556555-5556629)
chr3 (480-550)||(24099355-24099425)
chr3 (474-523)||(33143971-33144020)
chr3 (209-246)||(39021052-39021089)
chr3 (474-537)||(1652908-1652971)
chr3 (289-386)||(4170889-4170989)
chr3 (480-518)||(30127277-30127315)
chr3 (269-439)||(28937530-28937703)
chr3 (480-549)||(31424220-31424289)
[»] chr2 (38 HSPs)
chr2 (236-695)||(7874129-7874586)
chr2 (203-660)||(14106274-14106734)
chr2 (217-529)||(5254260-5254566)
chr2 (202-577)||(14405155-14405528)
chr2 (269-670)||(39338683-39339086)
chr2 (217-555)||(387151-387489)
chr2 (203-374)||(7460835-7461005)
chr2 (273-667)||(10523960-10524360)
chr2 (291-668)||(16952223-16952600)
chr2 (291-668)||(17022888-17023265)
chr2 (291-668)||(17060194-17060571)
chr2 (270-570)||(10173398-10173696)
chr2 (209-277)||(14437025-14437092)
chr2 (464-549)||(1269467-1269552)
chr2 (481-570)||(37770670-37770759)
chr2 (269-466)||(17116696-17116894)
chr2 (475-667)||(17105275-17105470)
chr2 (474-549)||(22885155-22885229)
chr2 (480-570)||(18681028-18681118)
chr2 (484-549)||(9560820-9560885)
chr2 (474-570)||(4471887-4471982)
chr2 (474-570)||(13337237-13337333)
chr2 (482-570)||(15126440-15126528)
chr2 (464-518)||(2062904-2062958)
chr2 (464-526)||(16959989-16960051)
chr2 (480-570)||(31902442-31902532)
chr2 (489-658)||(41086825-41086994)
chr2 (481-534)||(23650384-23650437)
chr2 (401-525)||(34230209-34230331)
chr2 (478-518)||(4162046-4162086)
chr2 (289-511)||(7695985-7696207)
chr2 (424-668)||(17079033-17079277)
chr2 (480-570)||(27739938-27740028)
chr2 (474-523)||(33788654-33788703)
chr2 (481-539)||(36276200-36276258)
chr2 (376-438)||(41086723-41086785)
chr2 (487-516)||(23665439-23665468)
chr2 (474-550)||(25504931-25505007)
[»] chr7 (39 HSPs)
chr7 (282-695)||(34389799-34390213)
chr7 (203-629)||(35745574-35746004)
chr7 (270-670)||(3866977-3867379)
chr7 (277-667)||(38306124-38306517)
chr7 (269-667)||(47325702-47326103)
chr7 (305-670)||(33434970-33435337)
chr7 (272-670)||(3419475-3419877)
chr7 (400-565)||(6584877-6585042)
chr7 (272-589)||(41089569-41089886)
chr7 (273-670)||(10244043-10244442)
chr7 (269-665)||(37794865-37795253)
chr7 (295-670)||(5860131-5860509)
chr7 (303-658)||(8745026-8745384)
chr7 (239-372)||(6585043-6585176)
chr7 (269-511)||(44353380-44353623)
chr7 (240-509)||(48161817-48162083)
chr7 (296-570)||(24324640-24324916)
chr7 (268-549)||(3478336-3478614)
chr7 (272-570)||(25160778-25161072)
chr7 (480-570)||(38485519-38485609)
chr7 (481-570)||(42533281-42533370)
chr7 (464-655)||(1320671-1320863)
chr7 (269-392)||(31971951-31972074)
chr7 (464-668)||(6716748-6716954)
chr7 (474-570)||(13311802-13311898)
chr7 (202-285)||(34391427-34391511)
chr7 (496-630)||(44755529-44755663)
chr7 (474-657)||(16954527-16954712)
chr7 (474-546)||(12480873-12480945)
chr7 (480-570)||(46133306-46133396)
chr7 (481-525)||(9349757-9349801)
chr7 (474-570)||(16828958-16829054)
chr7 (464-570)||(47457034-47457140)
chr7 (480-570)||(11379155-11379245)
chr7 (484-518)||(46262151-46262185)
chr7 (478-518)||(17802842-17802882)
chr7 (484-518)||(27993568-27993602)
chr7 (484-518)||(35206725-35206759)
chr7 (269-372)||(6716554-6716658)
[»] chr8 (29 HSPs)
chr8 (220-695)||(15821147-15821622)
chr8 (217-502)||(38577554-38577840)
chr8 (269-670)||(9519359-9519764)
chr8 (272-670)||(37986678-37987079)
chr8 (272-676)||(24995214-24995622)
chr8 (276-670)||(32066119-32066516)
chr8 (363-670)||(36630697-36631008)
chr8 (217-447)||(35816012-35816238)
chr8 (269-570)||(31207179-31207479)
chr8 (272-670)||(34388827-34389226)
chr8 (269-511)||(20138448-20138691)
chr8 (464-658)||(10248565-10248761)
chr8 (356-554)||(16457364-16457562)
chr8 (275-556)||(12898098-12898378)
chr8 (474-570)||(30236150-30236246)
chr8 (270-527)||(41893220-41893475)
chr8 (321-549)||(17656873-17657099)
chr8 (480-570)||(10552232-10552321)
chr8 (481-570)||(32945732-32945821)
chr8 (474-533)||(15906686-15906745)
chr8 (474-568)||(17720728-17720821)
chr8 (480-550)||(35062440-35062510)
chr8 (266-317)||(36631040-36631091)
chr8 (334-375)||(22773658-22773699)
chr8 (484-515)||(40531250-40531281)
chr8 (484-518)||(33967341-33967375)
chr8 (485-519)||(36796620-36796654)
chr8 (269-314)||(16457292-16457337)
chr8 (481-537)||(41791293-41791349)
[»] chr4 (43 HSPs)
chr4 (209-668)||(2825648-2826104)
chr4 (209-660)||(31050419-31050871)
chr4 (250-505)||(35341139-35341391)
chr4 (269-670)||(8254887-8255291)
chr4 (269-670)||(8268305-8268709)
chr4 (269-670)||(30964301-30964701)
chr4 (429-668)||(4305587-4305828)
chr4 (401-630)||(25753074-25753302)
chr4 (449-658)||(22811157-22811367)
chr4 (303-629)||(19815073-19815402)
chr4 (464-637)||(53823433-53823608)
chr4 (269-549)||(30167382-30167661)
chr4 (303-647)||(19672985-19673328)
chr4 (464-570)||(38929790-38929896)
chr4 (474-523)||(16501741-16501790)
chr4 (289-514)||(38637069-38637294)
chr4 (472-536)||(49747524-49747588)
chr4 (474-548)||(46698807-46698881)
chr4 (394-668)||(12296038-12296312)
chr4 (474-555)||(35800467-35800548)
chr4 (474-570)||(2061760-2061856)
chr4 (481-549)||(39421042-39421110)
chr4 (269-570)||(48098296-48098599)
chr4 (289-439)||(49528164-49528317)
chr4 (269-370)||(8705961-8706061)
chr4 (266-327)||(20464796-20464857)
chr4 (482-537)||(6599975-6600030)
chr4 (475-542)||(21387227-21387294)
chr4 (483-522)||(26474847-26474886)
chr4 (480-562)||(19311371-19311451)
chr4 (480-518)||(39041302-39041340)
chr4 (484-518)||(40813813-40813847)
chr4 (480-537)||(36962643-36962700)
chr4 (480-536)||(2165505-2165560)
chr4 (487-523)||(53756766-53756802)
chr4 (283-317)||(21387034-21387068)
chr4 (351-437)||(39420914-39421000)
chr4 (599-668)||(46698933-46699002)
chr4 (480-513)||(2792302-2792335)
chr4 (489-518)||(37707392-37707421)
chr4 (484-516)||(10388578-10388610)
chr4 (484-516)||(17416541-17416573)
chr4 (490-570)||(21987964-21988044)
[»] chr5 (25 HSPs)
chr5 (272-670)||(34377958-34378359)
chr5 (269-670)||(18593103-18593507)
chr5 (267-670)||(698221-698626)
chr5 (269-570)||(29087444-29087743)
chr5 (321-652)||(8297347-8297678)
chr5 (474-629)||(7392053-7392209)
chr5 (481-658)||(13954263-13954441)
chr5 (217-372)||(7161782-7161935)
chr5 (401-647)||(7195191-7195435)
chr5 (480-570)||(31721640-31721730)
chr5 (474-570)||(33258904-33259000)
chr5 (400-570)||(14302380-14302548)
chr5 (474-668)||(24072288-24072484)
chr5 (402-488)||(7162267-7162353)
chr5 (480-550)||(12046238-12046308)
chr5 (481-568)||(17854096-17854183)
chr5 (464-530)||(22675336-22675402)
chr5 (458-533)||(25992007-25992083)
chr5 (483-570)||(26045995-26046082)
chr5 (474-518)||(39184209-39184253)
chr5 (481-547)||(39024479-39024545)
chr5 (474-518)||(21402859-21402903)
chr5 (475-533)||(23426344-23426402)
chr5 (464-570)||(27713032-27713138)
chr5 (474-550)||(8730900-8730976)
[»] chr6 (19 HSPs)
chr6 (269-667)||(3117355-3117757)
chr6 (457-637)||(16510306-16510489)
chr6 (269-658)||(20701618-20702011)
chr6 (514-660)||(15132585-15132732)
chr6 (475-667)||(32935362-32935556)
chr6 (492-658)||(3880623-3880791)
chr6 (475-559)||(26216042-26216125)
chr6 (480-536)||(34105410-34105466)
chr6 (269-392)||(10541973-10542096)
chr6 (475-570)||(12794077-12794173)
chr6 (475-546)||(26534742-26534813)
chr6 (474-532)||(9224042-9224100)
chr6 (269-375)||(14663236-14663341)
chr6 (483-536)||(21266110-21266163)
chr6 (474-570)||(33968635-33968731)
chr6 (321-439)||(3880469-3880587)
chr6 (480-518)||(34090378-34090416)
chr6 (464-517)||(13423482-13423535)
chr6 (601-637)||(9223936-9223972)
[»] scaffold0068 (1 HSPs)
scaffold0068 (336-670)||(35655-35993)
[»] scaffold0050 (1 HSPs)
scaffold0050 (352-658)||(36580-36888)
[»] scaffold0200 (1 HSPs)
scaffold0200 (401-549)||(19367-19513)
[»] scaffold0063 (1 HSPs)
scaffold0063 (352-658)||(58000-58306)
[»] scaffold0343 (1 HSPs)
scaffold0343 (273-491)||(5747-5966)
[»] scaffold1613 (1 HSPs)
scaffold1613 (474-668)||(1039-1234)
[»] scaffold0119 (1 HSPs)
scaffold0119 (464-549)||(42150-42235)
[»] scaffold0620 (1 HSPs)
scaffold0620 (480-536)||(3827-3883)


Alignment Details
Target: chr1 (Bit Score: 575; Significance: 0; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 575; E-Value: 0
Query Start/End: Original strand, 8 - 695
Target Start/End: Complemental strand, 7858166 - 7857490
Alignment:
Q  8 gctttttaccgtggaatcaaaaggctacaaattgtaactttagaaaaaatgcacattcaccttttgaattattcttcaatgttgtccactccacgagtta 107  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7858166 gctttttaccgtggaatcaaaaggctacaaatagtaactttagaaaaaatgcacattcaccttttgaattattcttcaatgttgtccactccacgagtta 7858067  T
Q  108 catgggattttgtttgtataagtaatgaaattctaatctttttatggtgattttgtttttgcaattctaattgatctcttgcttgaaatacattaaagcc 207  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||    
T  7858066 catgggattttgtgtgtataagtaatgaaattctaatctttttatggtgattttgtttttgcaattctaattgatctcttgcttgaa----------gcc 7857977  T
Q  208 tctgaagataacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccacta 307  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  7857976 tctgaagataacccaccgaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggt--ccacaaccacccatcgccacta 7857879  T
Q  308 ctcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttc 407  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7857878 ctcacccccatagaacacccctcaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatggacaagcagcttc 7857779  T
Q  408 cacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtga 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7857778 cacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggccaaaaaccaacttcagcaaaagagttgactcccgatctcgaatcaaaagtga 7857679  T
Q  508 tcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaacatatcaagtcaaacataattccaactagacatc 607  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  7857678 tcggcccaccagactttagaaccaaatcagcagggcacccctcgcccccagtacaccagagaacaacatatcaagtcaaacataattgcaactagacacc 7857579  T
Q  608 aactctcgatctcgaagc-aaaataaccggctcactggaaaccagcacacaatatgtaagacgataaacaatgatatgcgattggtgca 695  Q
    ||||| |||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7857578 aactcccgatctcgaagcaaaaataatcggcccactggaaaccagcacacaatatgtaagacgataaacaatgatatgcgattggtgca 7857490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 202 - 692
Target Start/End: Complemental strand, 24659259 - 24658770
Alignment:
Q  202 aaagcctctgaagataa-cccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatc 300  Q
    |||||| |||||||||| ||||||||| ||||| | ||||||||| ||||||||||| ||||||||| || ||||||||| ||| ||| |||||||||||    
T  24659259 aaagcccctgaagataaacccaccaaaacacataaccacctaagatggacaccttaaaagaaacaaa-cattgtaaacacagtaaccataaccacccatc 24659161  T
Q  301 gccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaag 400  Q
    | ||||||||||||||| | ||||||||| |||||||||||||||||||| ||| ||||  ||||||||||||  ||||||| ||||||||||||||| |    
T  24659160 gtcactactcacccccaaataacacccctcaaaataaaactcccagactt-aactcccaggctgagccacattcgaaaagcttctaaccgaatgaacatg 24659062  T
Q  401 cagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatca 500  Q
      |||||||||||||||||||| ||||||||||||||||||||||||| |||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  24659061 atgcttccacaacctctcgacctccgatccaccgaaagagcacaaaaccaaagcccaaaaaccaacttcagccaaagagctgactcccgatctcgaatca 24658962  T
Q  501 aaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaacatatcaagtcaaacataattccaact 600  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| || ||    
T  24658961 aaagtgattggcccaccagactttagaaccaaatcagcagggcaccccttgcccccgatacaccagagaacaccatatcaagtcaaacatgattgcagct 24658862  T
Q  601 agacatcaactctcgatctcgaagc-aaaataaccggctcactggaaaccagcacacaatatgtaagacgataaacaatgatatgcgattggt 692  Q
    ||||| |||||| |||||| ||||| |||||||||||| ||| |||  ||||||||||| ||||||||||||| || ||||||||||||||||    
T  24658861 agacaccaactcccgatcttgaagcaaaaataaccggcccaccggactccagcacacaaaatgtaagacgatagac-atgatatgcgattggt 24658770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 202 - 695
Target Start/End: Original strand, 46814217 - 46814709
Alignment:
Q  202 aaagcctctgaagataaccc-accaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatc 300  Q
    |||||| |||||||||| || |||||| ||||||| |||||||||| |||||||||||||||||||| | |||||||||| ||||||||||||  |||||    
T  46814217 aaagcccctgaagataaacctaccaaaacacatcaccacctaagacagacaccttaacagaaacaaacc-ctgtaaacacagtatccacaaccgtccatc 46814315  T
Q  301 gccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaag 400  Q
    | ||||||||||| ||| | |||||||||  |||||||||||||| |||||||||||||  | ||||||||||  |||||||||||| |||||||||  |    
T  46814316 gtcactactcacctccaaataacacccctcgaaataaaactcccatacttcaacacccacgccgagccacattcgaaaagctcctaatcgaatgaacttg 46814415  T
Q  401 cagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatca 500  Q
    |||||||  ||||||||||||  |||||||||||||||||||||||||||||| | |||||||||||| ||| ||| |||||||||||||||||||||||    
T  46814416 cagcttctgcaacctctcgacatccgatccaccgaaagagcacaaaacaaaagccaaaaaaccaacttgagccaaaaagctgactcccgatctcgaatca 46814515  T
Q  501 aaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaacatatcaagtcaaacataattccaact 600  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||| |||||    
T  46814516 aaagtgatcggcccaccagactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaccatatcaagtcaaacaggattgcaact 46814615  T
Q  601 agacatcaactctcgatctcgaagc-aaaataaccggctcactggaaaccagcacacaatatgtaagacgataaacaatgatatgcgattggtgca 695  Q
    ||||| ||||||||||||||||| | |||||||||||| ||  ||| ||||||| |||| || ||||| | || || |||||||| ||||||||||    
T  46814616 agacaccaactctcgatctcgaatcaaaaataaccggcccatcggacaccagcaaacaa-atataagatggtagac-atgatatgtgattggtgca 46814709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 210 - 589
Target Start/End: Original strand, 27031601 - 27031977
Alignment:
Q  210 tgaagataacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactact 309  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||| | |||||||||| ||||||| |||  || |||| |||||||    
T  27031601 tgaagataaccc-ccaaaacacatcaccacctaagacggacaccttaacagaaacaaacc-ctgtaaacacagtatccataacggcctatcgtcactact 27031698  T
Q  310 cacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttcca 409  Q
    |||||| | ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||  |||||||| |||||||||||||| ||||||||||    
T  27031699 cacccc-agagaacacccctcaaaataaaactcccagacttcaacatccaaactgagccacattcgaaaagctcttaaccgaatgaacatgcagcttcca 27031797  T
Q  410 caacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatc 509  Q
    ||||||||| ||| |||||||||||||||||||||||||||||  |  ||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  27031798 caacctctcaacctccgatccaccgaaagagcacaaaacaaaatccctaaaaccaacttgagccaaagagctgactctcgatctcgaatcaaaagtgatc 27031897  T
Q  510 ggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaacatatcaagtcaaaca 589  Q
    ||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||    
T  27031898 ggcccactagactttagaaccaaatcagcagggcacccctttcccccggtacaccagagaacaccatatcaactcaaaca 27031977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 269 - 668
Target Start/End: Original strand, 46692636 - 46693038
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||||||| |||| || ||| ||||||| |||||||||||| || ||||||||| |  |||||||||| ||||||  |||||||||| |||||||    
T  46692636 cactgtaaacacgatatcaaccaccgcccatcgtcactactcacccacaaagaacaccc-tccaaataaaacttccagaccccaacacccaagctgagcc 46692734  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||||| || ||| | |||||| | ||  | ||||||  ||||| |||| ||||| |||| ||||||||||||||||| ||||| | | ||||||||||    
T  46692735 acatttcgaagagcacttaaccggaggataatgcagctatcacaaacctcgcgacctccgaaccaccgaaagagcacaacacaaa-gcccaaaaaccaac 46692833  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    || ||| ||||| || |||||||||||||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||| || ||||||||||||||||    
T  46692834 ttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccagactatatcaccaaattagcagggcacctctcgcccccggtacaccag 46692933  T
Q  567 agaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgt 663  Q
    |||| || || ||||||||||||| | ||| ||||||||| || |||| |||||||||||| |||| || |||| ||| | |||| ||||||||||||||    
T  46692934 agaaaaatcaaatcaagtcaaacaaagattgcaactagacctcgactcccgatctcgaagccaaatgaatcggcccaccgaaaactagcacacaatatgt 46693033  T
Q  664 aagac 668  Q
    |||||    
T  46693034 aagac 46693038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 273 - 667
Target Start/End: Original strand, 5389243 - 5389639
Alignment:
Q  273 gtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacat 372  Q
    ||||||||||||||||| ||| ||||||| ||||||||||   || ||||||||| | ||||||||||||||||||  |||||||||| |||||||||||    
T  5389243 gtaaacacggtatccaccaccgcccatcgtcactactcacttaca-agaacaccc-tcaaaataaaactcccagaccccaacacccaagctgagccacat 5389340  T
Q  373 ttc-aaaagctcctaaccgaatgaacaagcagcttccac-aacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttca 470  Q
     || || ||| | |||||||| || || | ||||  ||| |||||| ||||| |||| ||||||||||||||||| || |||| | |||||| ||||| |    
T  5389341 atcgaagagcacttaaccgaaggaccatgtagctaacacaaacctcgcgacctccgaaccaccgaaagagcacaacac-aaagcccaaaaacaaacttga 5389439  T
Q  471 gcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    |  ||||| |||||||||||||||||||||||||||||||||||  || ||| ||| ||||||| ||| |||||||||| ||||||||||||||||||||    
T  5389440 gtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccggtacaccagagaa 5389539  T
Q  571 caa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgtaaga 667  Q
     || || ||||||||||||| | ||| || ||||||    |||| |||||||||||| |||| ||||||| ||||| |||||||||||||||||||||||    
T  5389540 aaatcaaatcaagtcaaacaaagattgcagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaatatgtaaga 5389639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 269 - 670
Target Start/End: Original strand, 24449747 - 24450151
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||||| || | ||||||| | ||||||||||||| ||||  |||||||||| |||||||    
T  24449747 cactgtaaacacggtatccaccaccgcccatcgtcactactcacccacaaataacaccc-tcaaaataaaactcctagaccccaacacccaagctgagcc 24449845  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
     |||||| || ||| |||||||||| || || ||| ||  ||||| |||| ||||| |||||||||| ||||||||||| |||||   | ||||||||||    
T  24449846 gcatttcgaagagcacctaaccgaaggatcatgcaactatcacaaacctcgcgacctccgatccaccaaaagagcacaacacaaatccc-aaaaaccaac 24449944  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    || ||  ||||| |||||| |||||||| ||||||||||||||||||||||||||| ||| ||||||  |||||||||||||| ||||||||||||||||    
T  24449945 ttaagacaaagaactgacttccgatctcaaatcaaaagtgatcggcccaccaaactatagtaccaaaatagcagggcacccctcgcccccggtacaccag 24450044  T
Q  567 agaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgt 663  Q
    |||| || || | ||||||||||| | ||| || ||||||  | |||| |||||||||||| |||| || |||| ||  | |||||| |||| |||||||    
T  24450045 agaaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaaccaacacataatatgt 24450144  T
Q  664 aagacga 670  Q
    |||||||    
T  24450145 aagacga 24450151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 363 - 670
Target Start/End: Original strand, 24684388 - 24684697
Alignment:
Q  363 tgagccacatttcaaa-agctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaa 461  Q
    ||||||||||||| || ||| ||| |||||| || || ||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| | |||||    
T  24684388 tgagccacatttcgaagagcacctgaccgaaggatcatgcatcttccacaacctcgcgacctccgatccaccgaaagagcacaaaacaaaagcccaaaaa 24684487  T
Q  462 ccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtac 561  Q
    ||||||  ||  ||||| |||||  |||||||||||| ||||||||||||||||||| ||||||||| ||||| || ||||||||||| |||||||||||    
T  24684488 ccaactagagtcaaagaactgacatccgatctcgaattaaaagtgatcggcccaccagactttagaatcaaattagtagggcacccctcgcccccggtac 24684587  T
Q  562 accagagaacaacatatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaat 659  Q
    ||||||||| | || ||||||||||||| | ||| || ||||||  | |||| |||||||||||| |||| ||  ||| ||| | |||||||||||||||    
T  24684588 accagagaaaaccaaatcaagtcaaacaaagattacagctagaccccgactcccgatctcgaagccaaatgaattggc-caccgaaaaccagcacacaat 24684686  T
Q  660 atgtaagacga 670  Q
    |||||||||||    
T  24684687 atgtaagacga 24684697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 272 - 670
Target Start/End: Complemental strand, 41920718 - 41920313
Alignment:
Q  272 tgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccaca 371  Q
    |||||||||||||| ||| ||| || |||| |||||||||||| || | ||||||| | ||||||||||||| ||||  |||||||||| ||||||||||    
T  41920718 tgtaaacacggtattcaccaccgcctatcgtcactactcacccacaaaaaacaccc-tcaaaataaaactccaagaccccaacacccaagctgagccaca 41920620  T
Q  372 tt-tcaaaagctcctaaccgaatg-----aacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaacca 464  Q
    |  | || ||| |||||| ||| |     | || ||||||  ||||| |||| ||||| |||||||||||||||||||||| ||||| | | |||| |||    
T  41920619 tgatgaagagcacctaactgaaggttaggatcatgcagctatcacaaacctcgcgacctccgatccaccgaaagagcacaacacaaa-gcccaaaatcca 41920521  T
Q  465 acttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacacc 564  Q
    |||| ||  ||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||| | |||| |||||||    
T  41920520 acttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactgtagtaccaaattagcagggcacccctcg-ccccagtacacc 41920422  T
Q  565 agagaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatat 661  Q
    |||||| || || ||||||||||||| | ||| || ||||||  | |||| |||||||||||| |||| ||||||| ||| | |||| ||||||||||||    
T  41920421 agagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaactagcacacaatat 41920322  T
Q  662 gtaagacga 670  Q
    |||||||||    
T  41920321 gtaagacga 41920313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 269 - 561
Target Start/End: Complemental strand, 5459425 - 5459133
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||||| || |||||| || | ||||||||||| ||||||  |||||||||| |||||||    
T  5459425 cactgtaaacacggtatccaccaccgcccatcgtcactactcacccacaaagaaca-ccatcaaaataaaacttccagaccccaacacccaagctgagcc 5459327  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccac-aacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    |||||||||| ||| |||||| ||| || || ||||||  ||| |||||| | ||| |||| |||| |||||||||||| || |||| | ||||| ||||    
T  5459326 acatttcaaagagcacctaactgaaggatcatgcagctatcacaaacctcgcaacctccgaaccactgaaagagcacaacac-aaagcccaaaaatcaac 5459228  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtac 561  Q
    || |   ||| |  |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||| |||||| |||||||||||    
T  5459227 ttgaatcaaataattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggtacccctcgcccccggtac 5459133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 351 - 670
Target Start/End: Original strand, 30685802 - 30686125
Alignment:
Q  351 caacacccaaactgagccacatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaac 448  Q
    |||||||||| ||||||||||| ||||  ||| ||||||| || || || ||||||  ||||| |||| ||||| |||| ||||||||||||||||| ||    
T  30685802 caacacccaagctgagccacatatcaaggagcacctaaccaaaggatcatgcagctatcacaaacctcgcgacctccgaaccaccgaaagagcacaacac 30685901  T
Q  449 aaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccc 548  Q
    ||| | | |||| ||||||| ||  ||||| ||||||||||||||| ||||||||||||||||||||| | ||| ||| ||||||| |||||||||||||    
T  30685902 aaa-gcccaaaagccaacttgagtcaaagaactgactcccgatctcaaatcaaaagtgatcggcccacaagactatagtaccaaattagcagggcacccc 30686000  T
Q  549 ttgcccccggtacaccagagaacaa-catatcaagtcaaac-ataattccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactgga 645  Q
    | ||||| |||||||||||||| || || |||||||||||| |  ||| ||  ||||| || |||| |||||||||||| |||| ||||||| ||| | |    
T  30686001 tcgccccaggtacaccagagaaaaaccaaatcaagtcaaacaaggattgcagttagacctcgactcccgatctcgaagccaaatgaaccggcccaccgaa 30686100  T
Q  646 aaccagcacacaatatgtaagacga 670  Q
    ||||| |||||||||||||||||||    
T  30686101 aaccaacacacaatatgtaagacga 30686125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 303 - 670
Target Start/End: Original strand, 31585610 - 31585981
Alignment:
Q  303 cactactcacccccatagaacaccccttaaaataaaactcccagacttc-aacacccaaactgagccacatttcaaa-agctcctaaccgaatgaacaag 400  Q
    |||||||||||| || ||||||||| | |||||||||||| |||||  | ||||||||| || ||||||||||| || ||| ||||||| || || ||      
T  31585610 cactactcacccacaaagaacaccc-tcaaaataaaactctcagacccccaacacccaagcttagccacatttcgaagagcacctaaccaaaggatcata 31585708  T
Q  401 cagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatc 499  Q
    |||||  ||||| |||| ||||| |||| ||||||||| ||||||| ||||| | | |||||||||||| ||  ||||| ||||||||||||||||||||    
T  31585709 cagctatcacaaacctcgcgacctccgacccaccgaaatagcacaacacaaa-gcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatc 31585807  T
Q  500 aaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaa-catatcaagtcaaacata-attcca 597  Q
    ||||||||||||||||||| ||| ||| ||||||| ||||||||||||||  ||| | ||||||||||||| || || ||||||||||||| | ||| ||    
T  31585808 aaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcaccctcagtacaccagagaaaaaccaaatcaagtcaaacaaagattgca 31585907  T
Q  598 actagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgtaagacga 670  Q
     ||||||  | |||| |||||||||||| |||| ||||||| |||   ||| ||||| ||| ||||||||||||    
T  31585908 gctagaccccgactcccgatctcgaagccaaatgaaccggcccaccaaaaatcagcaaacactatgtaagacga 31585981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 474 - 629
Target Start/End: Original strand, 9313311 - 9313467
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aaca 572  Q
    ||||| |||||||||||||||||||||||||||||| |||||| | ||||||| |||||||||| |||||||||||  | |||| ||||| |||| ||||    
T  9313311 aaagaactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaatcagaagggcacccctcacgcccgatacacgagagaaaca 9313410  T
Q  573 acatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa 629  Q
     || |||| | |||||| |||| || ||||||| |||||| ||||||||||||||||    
T  9313411 ccaaatcacggcaaacaaaattgcagctagacaccaactcccgatctcgaagcaaaa 9313467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 474 - 668
Target Start/End: Complemental strand, 17033645 - 17033449
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa-ca 572  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||| |||||||||| | | | |||| ||||| |||| ||    
T  17033645 aaagaactgactcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaatcagaagggcaccccctactctcggttcaccatagaatca 17033546  T
Q  573 acatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaagac 668  Q
     | ||   || ||||||  ||| |||||||||  ||| ||||||||||||| ||||| |||||||| |||  ||| ||||||||||||| |||||||    
T  17033545 ccgtagtcagccaaacaagattgcaactagacgccaattctcgatctcgaaacaaaagtaaccggcccaccagaatccagcacacaataagtaagac 17033449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 480 - 570
Target Start/End: Complemental strand, 4651833 - 4651743
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||  |||| || |||| |||||||||||| |||||||||||||||||||    
T  4651833 ctgactcccgatctcgaatcaaaagtgatcggccccccagacttcggaacaaattcagaagggcaccccttacccccggtacaccagagaa 4651743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 474 - 668
Target Start/End: Original strand, 38544760 - 38544955
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaa 573  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||| |||| |  |||||||||| |||| ||||||    ||| || ||||||||||  |    
T  38544760 aaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg-acccctcattcccagtccaccagagaaaca 38544858  T
Q  574 c--atatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaagac 668  Q
    |  | ||||| |||||||  ||| || ||||||| |||||| | |||||||||||||| ||| |||| |||| ||| |||||||||||||||||||||    
T  38544859 ccaaaatcaa-tcaaacaagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccactagaatccagcacacaatatgtaagac 38544955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 457 - 667
Target Start/End: Original strand, 20113526 - 20113739
Alignment:
Q  457 aaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgccccc 556  Q
    |||||||||||| ||  ||||| |||| ||||||||| ||||||||| |||||| |||| || ||| ||  ||||||| |||||||||||||| ||||||    
T  20113526 aaaaaccaacttaagttaaagaactgattcccgatcttgaatcaaaaatgatcgtcccagcagactataataccaaattagcagggcacccctcgccccc 20113625  T
Q  557 ggtacaccagagaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagca 653  Q
    |||||||| ||||| || || | ||  || |||| | ||| || ||||||  | |||| |||||||||||| |||| ||||||| ||| | |||| ||||    
T  20113626 ggtacacccgagaaaaaccaaaccatatctaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaactagca 20113725  T
Q  654 cacaatatgtaaga 667  Q
    ||||||||||||||    
T  20113726 cacaatatgtaaga 20113739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 351 - 549
Target Start/End: Original strand, 6583117 - 6583313
Alignment:
Q  351 caacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaa 450  Q
    ||||||| || ||||||| |||   ||||||||||| | ||| || ||| |||||||||| ||||||||||| ||||| ||||||||||   || || ||    
T  6583117 caacaccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcagcttccaccacctctcgacctccgattcaccgaaagaaaccataaaaa 6583216  T
Q  451 aaggctaaaaaccaact-tcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccct 549  Q
       || |||||||||   | | | |||||  ||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||||| | |||||||||    
T  6583217 ---gcaaaaaaccaaaactgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaaaggcacccct 6583313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 474 - 570
Target Start/End: Complemental strand, 19598695 - 19598599
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||| |||| || ||| || |||  ||||||||||| ||| |||| ||||||||||    
T  19598695 aaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagacttcaggacccaaccagacgggcaccccttaccctcggtccaccagagaa 19598599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 570
Target Start/End: Complemental strand, 27102321 - 27102153
Alignment:
Q  401 cagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatca 500  Q
    |||||||||| ||||||||||| ||||||||||||||||   |  ||  |||| | |||| | ||||| | | ||||| |||||||||||||||||||||    
T  27102321 cagcttccaccacctctcgacctccgatccaccgaaagaaaccgtaa--aaagcccaaaaccaaacttgatccaaagaactgactcccgatctcgaatca 27102224  T
Q  501 aaagtgatcggcccaccaaactttagaaccaaatcagcagggca-ccccttgcccccggtacaccagagaa 570  Q
    ||||||||||||||   | |||||   |||||| ||| |||||| |||||  ||| |||||||||||||||    
T  27102223 aaagtgatcggcccgttagactttgagaccaaaacagaagggcaccccctcaccctcggtacaccagagaa 27102153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 352 - 439
Target Start/End: Original strand, 31290921 - 31291008
Alignment:
Q  352 aacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaaga 439  Q
    |||||| || |||||||||||   ||||||||||| ||||| || |||||| ||||||| ||||||||||| ||||||||||||||||    
T  31290921 aacaccaaagctgagccacatccgaaaagctcctatccgaaagatcaagcaacttccaccacctctcgacctccgatccaccgaaaga 31291008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 480 - 535
Target Start/End: Original strand, 15840940 - 15840995
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatc 535  Q
    |||||||||||||||||||||||||||||| |||||||| ||| ||||| ||||||    
T  15840940 ctgactcccgatctcgaatcaaaagtgatcagcccaccagactctagaaacaaatc 15840995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 474 - 668
Target Start/End: Original strand, 50589229 - 50589423
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaa 573  Q
    ||||| ||| |||||||| |||||||||||| |||| |||||||  |||| || ||| || |||  ||||||||||| ||||| || |||||||||| |     
T  50589229 aaagaactggctcccgatttcgaatcaaaagcgatcagcccaccggacttcaggacccaaccagacgggcaccccttacccccagtccaccagagaa-ac 50589327  T
Q  574 catatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaagac 668  Q
    | || | || ||||||  |   || ||||||  ||| || |||||||||||||||| |||||||| |||  ||| |||||||||||||||||||||    
T  50589328 cgtagccagccaaacaagaaagcagctagacgccaagtcccgatctcgaagcaaaattaaccggcccaccagaatccagcacacaatatgtaagac 50589423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 546
Target Start/End: Complemental strand, 34774923 - 34774858
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacc 546  Q
    ||||||||||||||||| |||||||||||||| |||||| || |||| |||||||||| ||||||||    
T  34774923 ctgactcccgatctcga-tcaaaagtgatcggtccaccagacgttaggaccaaatcagaagggcacc 34774858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 269 - 439
Target Start/End: Complemental strand, 32882630 - 32882465
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcac-ccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagc 367  Q
    ||||||||||||| ||||||  ||||||||||| |||||||||| |||||  |||||||||| ||||       ||||| | |||||||| || ||||||    
T  32882630 cactgtaaacacgatatccaacaccacccatcgtcactactcaccccccaacgaacacccctcaaaa------ccccagtcctcaacaccaaagctgagc 32882537  T
Q  368 cacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaaga 439  Q
    ||||||  |||||||||| |||||| || ||   ||||| ||| |||| |||| | ||||| ||||||||||    
T  32882536 cacattcgaaaagctcctgaccgaaagatcattaagctttcaccacctgtcgatctccgattcaccgaaaga 32882465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 482 - 549
Target Start/End: Original strand, 32864591 - 32864658
Alignment:
Q  482 gactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccct 549  Q
    |||| |||||||||||| ||||||||| |||||||||  |||||| |||||||| | |||||||||||    
T  32864591 gacttccgatctcgaattaaaagtgattggcccaccagcctttaggaccaaatcggaagggcacccct 32864658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 614 - 695
Target Start/End: Original strand, 27032025 - 27032106
Alignment:
Q  614 cgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaagacgataaacaatgatatgcgattggtgca 695  Q
    |||||||||||||||| ||| ||||  |  ||| |||||||||||||||||||||||||| || ||||||||| |||||||||    
T  27032025 cgatctcgaagcaaaaataatcggccgatcggacaccagcacacaatatgtaagacgatagac-atgatatgcaattggtgca 27032106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 549
Target Start/End: Complemental strand, 40933916 - 40933847
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccct 549  Q
    |||||| |||||||| ||||||||| ||||||  ||||||||||| |||||||| ||| ||| |||||||    
T  40933916 ctgacttccgatctcaaatcaaaagcgatcggttcaccaaactttcgaaccaaaacaggaggacacccct 40933847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 480 - 516
Target Start/End: Complemental strand, 30655613 - 30655577
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccac 516  Q
    ||||||||||||||||||||||||| |||||||||||    
T  30655613 ctgactcccgatctcgaatcaaaagcgatcggcccac 30655577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 536
Target Start/End: Complemental strand, 2877711 - 2877634
Alignment:
Q  458 aaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatca 536  Q
    ||||||||||| ||  ||||| ||| ||||| |||| |||||||| | |||||||||||||||||| | ||||||||||    
T  2877711 aaaaccaacttgagtcaaaga-ctggctcccaatcttgaatcaaatgcgatcggcccaccaaacttcaaaaccaaatca 2877634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 609 - 658
Target Start/End: Original strand, 10785490 - 10785540
Alignment:
Q  609 actctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaa 658  Q
    |||| ||||||||||||||||| ||||||| ||| ||||||||||||||||    
T  10785490 actcccgatctcgaagcaaaattaaccggcccaccggaaaccagcacacaa 10785540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 209 - 325
Target Start/End: Original strand, 30685683 - 30685797
Alignment:
Q  209 ctgaagataa-cccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccacta 307  Q
    |||||||||| ||||||||| ||||||| ||||||| || ||| ||  |||| ||||||  || |||||||||||||||||| ||| ||||||  |||||    
T  30685683 ctgaagataaacccaccaaaacacatcaccacctaaaacagactcc--aacaaaaacaag-caatgtaaacacggtatccaccaccgcccatcttcacta 30685779  T
Q  308 ctcacccccatagaacac 325  Q
    | ||||| || |||||||    
T  30685780 cacacccacaaagaacac 30685797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 480 - 570
Target Start/End: Complemental strand, 42374216 - 42374126
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||||||||||||| ||||||||| |||||| |||||| ||   |  |||||||||| ||||||||||   ||| |||||||||| ||||    
T  42374216 ctgactcccgatctcaaatcaaaagcgatcggtccaccagacaacatgaccaaatcagaagggcaccccaaaccctcggtacaccaaagaa 42374126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 534
Target Start/End: Complemental strand, 27905456 - 27905411
Alignment:
Q  489 gatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaat 534  Q
    ||||||||||||||||||||||| |||||| |||||| | ||||||    
T  27905456 gatctcgaatcaaaagtgatcggtccaccagactttaaacccaaat 27905411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 474 - 668
Target Start/End: Complemental strand, 16147614 - 16147418
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aaca 572  Q
    ||||| |||||||||||| | ||||||||| | |||| ||||||| |||| |  |||||| ||| |||| ||| ||  |||||||||| | |||| ||||    
T  16147614 aaagaactgactcccgatattgaatcaaaattcatcgtcccaccatacttaacgaccaaaacagaagggaacctctcacccccggtacgctagagaaaca 16147515  T
Q  573 acatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaagac 668  Q
     || |||||| ||||||  ||| || |||||||   |||| ||||||||||  |||| ||| |||| ||| |||| | | ||||||||| |||||||    
T  16147514 ccaaatcaagccaaacaagattgcagctagacagtgactcccgatctcgaactaaaagtaatcggcccaccggaacctaacacacaataagtaagac 16147418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 484 - 516
Target Start/End: Complemental strand, 38564950 - 38564918
Alignment:
Q  484 ctcccgatctcgaatcaaaagtgatcggcccac 516  Q
    ||||||||||||||||||||| |||||||||||    
T  38564950 ctcccgatctcgaatcaaaagcgatcggcccac 38564918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 285; Significance: 1e-159; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 232 - 672
Target Start/End: Original strand, 23328131 - 23328569
Alignment:
Q  232 atcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacacccctta 331  Q
    |||| ||||||||||||||  ||||||||||||||| |||||||| |||  ||||||||||||||||||| ||||||||||||||| |||||||| || |    
T  23328131 atcaccacctaagacggacctcttaacagaaacaaa-cactgtaagcacaatatccacaaccacccatcgtcactactcacccccaaagaacaccactca 23328229  T
Q  332 aaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatcca 431  Q
    ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  23328230 aaataaaactcccagacttcaacacccaagctgagccacattcgaaaagctcctaaccgaatgaacaaggagcttccacaacctctcgacctccgatcca 23328329  T
Q  432 ccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaacca 531  Q
    ||||||||||||||||||||||   |||||||||||| ||| ||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23328330 ccgaaagagcacaaaacaaaagctcaaaaaccaacttgagccaaaaagctaactcccgatctcgaatcaaaagtgatcggtccaccaaactttagaacca 23328429  T
Q  532 aatcagcagggcaccccttgcccccggtacaccagagaacaacatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaata 631  Q
    ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||| |||| || ||||||| |||||| |||||||||||||||| |    
T  23328430 aatcaacagggcacccctcgcccccggtacaccagagaacaccatatcaagtcaaacaaaattgcagctagacaccaactcccgatctcgaagcaaaa-a 23328528  T
Q  632 accggctcactggaaaccagcacacaatatgtaagacgata 672  Q
    |||||| ||  ||| ||||||||||||||||||||||||||    
T  23328529 accggcccatcggacaccagcacacaatatgtaagacgata 23328569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 202 - 695
Target Start/End: Original strand, 40023321 - 40023815
Alignment:
Q  202 aaagcctctgaagataa-cccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatc 300  Q
    |||||| |||||||||| |||| |||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40023321 aaagcccctgaagataaacccatcaaaacacatcaccacctaagacagacaccttaacagaaacaaaacactgtaaacacggtatccacaaccatccatc 40023420  T
Q  301 gccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaag 400  Q
    | ||||||||| ||| | ||||| ||||| ||||||||||||||||||| |||||||| | ||||||||||||  ||||||||||||||||||||||| |    
T  40023421 gtcactactcatcccaaaagaacgcccctcaaaataaaactcccagactacaacaccctagctgagccacattcgaaaagctcctaaccgaatgaacatg 40023520  T
Q  401 cagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatca 500  Q
    |||||||||||||||| || || | |||||||||||||||||||||||||||| | |||||||||||| ||| |||||   |||||||||||||||||||    
T  40023521 cagcttccacaacctcccgtcctctgatccaccgaaagagcacaaaacaaaagcccaaaaaccaacttaagccaaagaatcgactcccgatctcgaatca 40023620  T
Q  501 aaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaacatatcaagtc-aaacataattccaac 599  Q
    ||||||||||| |||||| |||||| ||| |||||||||||||| |||| ||||||||||||| |||||||| ||||||||||| |||||| ||| || |    
T  40023621 aaagtgatcggtccaccagactttaaaacaaaatcagcagggca-ccctcgcccccggtacactagagaacaccatatcaagtcaaaacatgattgcagc 40023719  T
Q  600 tagacatcaactctcgatctcgaagc-aaaataaccggctcactggaaaccagcacacaatatgtaagacgataaacaatgatatgcgattggtgca 695  Q
    |||||| |||||  |||||||||||| |||||||||||  ||| ||| ||||  |||||||||||||||||||| || ||||| |||||||||||||    
T  40023720 tagacaccaacttccgatctcgaagcaaaaataaccggtccaccggacaccaatacacaatatgtaagacgatagac-atgatgtgcgattggtgca 40023815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 217 - 549
Target Start/End: Complemental strand, 45399112 - 45398780
Alignment:
Q  217 aacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactactcaccccc 316  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||| || |||||| ||||||||||||||    
T  45399112 aacccaccaaaacacatcaccacctaagacggacaccttaacagaaacaaaacactgtaaacacaatatccacaatcatccatcgtcactactcaccccc 45399013  T
Q  317 atagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctc 416  Q
    |  |||||||||  |||||| |||||||| ||||||||||| ||  || ||||||||  |||||||| |||||||||||||| |||||||||||||||||    
T  45399012 aacgaacaccccacaaaatagaactcccaaacttcaacacctaagttgcgccacattcgaaaagctcataaccgaatgaacatgcagcttccacaacctc 45398913  T
Q  417 tcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccac 516  Q
    |||||| |||||||| |||||||||| |||||||||| | |||||||||||| |   ||||||||||||| |||||||||||||||||||||||| ||||    
T  45398912 tcgacctccgatccatcgaaagagcataaaacaaaagcccaaaaaccaacttaaatcaaagagctgactctcgatctcgaatcaaaagtgatcggtccac 45398813  T
Q  517 caaactttagaaccaaatcagcagggcacccct 549  Q
    || |||||| | |||||||||||||||||||||    
T  45398812 cagactttaaatccaaatcagcagggcacccct 45398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 269 - 676
Target Start/End: Complemental strand, 20612046 - 20611637
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    |||||||||||| |||||||| | | ||||||| |||||||||||| || ||||||||| | | ||||||||||| ||||  |||||||||| ||||| |    
T  20612046 cactgtaaacacagtatccaccatcgcccatcgtcactactcacccacaaagaacaccc-tcagaataaaactcctagacc-caacacccaagctgagtc 20611949  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||||| || ||| |||||||||| || ||  |||||  ||||| |||| ||||| ||||||||||||||||||||||  |||| | | ||||||||||    
T  20611948 acatttcgaagagcacctaaccgaaggatcattcagctatcacaaacctcgcgacctccgatccaccgaaagagcacaacgcaaa-gcccaaaaaccaac 20611850  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    || ||  ||||| |||||||||||||||||||||||| ||||||||||| |||||| ||| || |||| |||||||||||||| ||||||||||||||||    
T  20611849 ttaagtcaaagaactgactcccgatctcgaatcaaaaatgatcggcccaacaaactatagtacgaaattagcagggcacccctcgcccccggtacaccag 20611750  T
Q  567 agaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgt 663  Q
    |||| || || ||||||||||||| | ||| || ||||||  | ||||  ||||||||| | |||| ||||| | ||| | |||||||||||||||||||    
T  20611749 agaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcctgatctcgaaaccaaatgaaccgacccaccgaaaaccagcacacaatatgt 20611650  T
Q  664 aagacgataaaca 676  Q
    ||||||| |||||    
T  20611649 aagacgaaaaaca 20611637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 273 - 667
Target Start/End: Complemental strand, 19176764 - 19176366
Alignment:
Q  273 gtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacat 372  Q
    |||||||| |||||||| |||| |||||| ||||||||||||| | ||||||||| | |||||||||| |||||||  | |||||||| |||||||||||    
T  19176764 gtaaacacagtatccaccaccatccatcgtcactactcacccctaaagaacaccc-tcaaaataaaacacccagaccccgacacccaagctgagccacat 19176666  T
Q  373 ttcaaa-agctcctaaccgaat--gaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttc 469  Q
    | | || ||| ||| ||||||   || || ||||||||||||||||  ||||| |||||||||| |||||||||||| |||||| | ||||||||||||     
T  19176665 tacgaagagcacctgaccgaaaaggatcatgcagcttccacaaccttgcgacctccgatccaccaaaagagcacaaatcaaaagcccaaaaaccaacttg 19176566  T
Q  470 agcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagaga 569  Q
    ||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |  | ||||||||| ||||||    
T  19176565 agtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaattagcagggcaccc-tcactcccggtacatcagaga 19176467  T
Q  570 acaac-atatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgtaag 666  Q
    | ||| | || |||||||||| | ||| || ||||||  | ||||  ||||||||||| |||  |||| || ||| | |||||||||||||||| |||||    
T  19176466 aaaaccaaattaagtcaaacaaagattgcagctagaccccgactcctgatctcgaagccaaaggaaccagcccaccgaaaaccagcacacaataagtaag 19176367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 269 - 670
Target Start/End: Original strand, 2392323 - 2392727
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||||| || | ||||||    ||||||||||||| ||||  |||||||||| |||||||    
T  2392323 cactgtaaacacggtatccaccaccgcccatcgtcactactcacccacaaataacacctac-aaaataaaactcctagaccccaacacccaagctgagcc 2392421  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||||  || || ||||||||||| || || ||||||  ||||| |||| ||||| |||||||||||||||||||||| ||||| | | ||||||||||    
T  2392422 acattttgaagagatcctaaccgaaggatcatgcagctagcacaaacctcgcgacctccgatccaccgaaagagcacaacacaaa-gcccaaaaaccaac 2392520  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    || ||  ||||| |||||| || |||||||||||||||||||||| ||||||  || ||| ||||||| |||||||||||||| ||||||||||||||||    
T  2392521 ttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccctcgcccccggtacaccag 2392620  T
Q  567 ag-aacaacatatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgt 663  Q
    || || | || | ||||||||||| | ||| || ||||||  | |||| |||||| ||||| |||| ||||| | ||  | |||||||||||||||||||    
T  2392621 agtaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaaaccagcacacaatatgt 2392720  T
Q  664 aagacga 670  Q
    |||||||    
T  2392721 aagacga 2392727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 217 - 534
Target Start/End: Complemental strand, 43012690 - 43012374
Alignment:
Q  217 aacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactactcaccccc 316  Q
    |||||||||||  |||||| || |||| || ||| |||| ||| ||||||  || ||||||||||||||||||  ||  |||||||||||||||||| ||    
T  43012690 aacccaccaaaagacatcaccatctaaaacagactccttcacaaaaacaag-cattgtaaacacggtatccacccccgtccatcgccactactcacctcc 43012592  T
Q  317 atagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaa-agctcctaaccgaatgaacaagcagcttccacaacct 415  Q
    | ||||||||| | ||| ||||||||| ||||  |||||||||| |||||||||||||| || ||| ||| |||||| || || ||| ||||||||||||    
T  43012591 aaagaacaccc-tcaaattaaaactcctagaccccaacacccaagctgagccacatttcgaagagcacctgaccgaacgatcatgcaacttccacaacct 43012493  T
Q  416 ctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggccca 515  Q
    | ||||| | ||| ||||||||||||||||||||||||   |||||||||||| ||  ||||| |||||||||||||||||||||||||||||||| |||    
T  43012492 cgcgacctctgattcaccgaaagagcacaaaacaaaagctcaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgggcca 43012393  T
Q  516 ccaaactttagaaccaaat 534  Q
    ||| |||||||||||||||    
T  43012392 ccagactttagaaccaaat 43012374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 272 - 668
Target Start/End: Original strand, 34475576 - 34475973
Alignment:
Q  272 tgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccaca 371  Q
    |||||||||||||||||| ||| ||||||| |||||||||||| || ||||||||| ||||||  |||||| || ||  ||||||| || ||||| ||||    
T  34475576 tgtaaacacggtatccaccaccgcccatcgtcactactcacccacaaagaacaccc-ttaaaa--aaactctcataccccaacacctaagctgagtcaca 34475672  T
Q  372 tttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttc 469  Q
    |||| || ||| |||||||||| || ||  |||||  ||||| |||| ||||| || ||||||||||||||||||| ||||| | | ||||| ||||||     
T  34475673 tttcgaagagcacctaaccgaaggatcatacagctatcacaaacctcgcgacctccaatccaccgaaagagcacaacacaaa-gcccaaaaatcaactta 34475771  T
Q  470 agcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagaga 569  Q
    |    ||||  |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||| |||||||||||||| |||||||||||||||||||    
T  34475772 attccaagatttgactcccgatctcgaatcaaaagtgatcggcccaccagactatagaaacaaattagcagggcacccctcgcccccggtacaccagaga 34475871  T
Q  570 acaa-catatcaagtcaaac-ataattccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgtaag 666  Q
    | || || | |||||||||| | |||| || ||||||  | |||| |||||||||||| |||| || |||| ||  | |||||||||||| |||||||||    
T  34475872 aaaatcaaaccaagtcaaacaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaaccagcacacgatatgtaag 34475971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 285 - 482
Target Start/End: Complemental strand, 21342784 - 21342586
Alignment:
Q  285 tccacaaccacccatcgccactactcacccccata-gaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctc 383  Q
    |||||||||||  |||  ||| ||||||||||| | |||||||||||  |||||||||| |||||||||||||||||   ||||||||||  |||||||     
T  21342784 tccacaaccacttatcatcacaactcacccccaaacgaacaccccttggaataaaactctcagacttcaacacccaagtcgagccacattcgaaaagctt 21342685  T
Q  384 ctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctg 482  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||| ||||||||||| ||  || |||||||||    
T  21342684 ctaaccgaatgaacaagcagcttccacaacctctcgacctctgatccatcgaaagagcacaaaacaaaagcctaaaaaccaagttgggctaaagagctg 21342586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 273 - 570
Target Start/End: Original strand, 9583876 - 9584171
Alignment:
Q  273 gtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacat 372  Q
    ||||||||| ||||||| ||| || |||| ||||||||||| | | |||||| || | ||||||||||||||||||  ||| |||||| | ||||||||     
T  9583876 gtaaacacgatatccaccaccgcctatcgtcactactcaccgcaa-agaacatcc-tcaaaataaaactcccagaccccaaaacccaagcagagccacaa 9583973  T
Q  373 ttcaaa-agctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcag 471  Q
    ||| || ||| ||| |||||| || |  ||  |||| |||||||| | ||| |||||||||||||||| ||||||||||||| | |||||||| ||| ||    
T  9583974 ttcgaagagcgcctgaccgaaggatcgtgcgacttc-acaacctcgcaacctccgatccaccgaaagatcacaaaacaaaagcccaaaaaccatcttgag 9584072  T
Q  472 caaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
      ||||| |||||||||||||||||||||||||||||||  |||||| ||||||| | ||||| ||||||||||||  | |||||||||||| ||||||    
T  9584073 acaaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagactttagtatcaaattagcagggcaccctctccccccggtacacaagagaa 9584171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 272 - 562
Target Start/End: Complemental strand, 45164116 - 45163824
Alignment:
Q  272 tgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccaca 371  Q
    |||||||||||||| ||  ||| ||||||| ||||| |||||  || | ||||||| | ||||||||||||| ||||  |||||||||| || |||||||    
T  45164116 tgtaaacacggtattcatcaccgcccatcgtcactaatcacctacaaataacaccc-tcaaaataaaactcctagaccccaacacccaagctaagccaca 45164018  T
Q  372 tttcaaa-agctcctaaccgaatgaacaagcagcttccacaacct-ctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttc 469  Q
    |||| || ||| |||||||||| || || ||||||  ||||| || |  |||| |||||||||||||||||||||| ||||| | | ||||||||||||     
T  45164017 tttcgaagagcacctaaccgaaggatcatgcagctatcacaaacttcgtgacctccgatccaccgaaagagcacaacacaaa-gcccaaaaaccaactta 45163919  T
Q  470 agcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccac-caa-actttagaaccaaatcagcagggcaccccttgcccccggtaca 562  Q
    ||  ||| | |||||| | |||||||||||||||||||||||||||| ||| ||| ||| ||||||| |||||||||||||| |||| |||||||    
T  45163918 agacaaaaaactgacttctgatctcgaatcaaaagtgatcggcccacacaagactatagtaccaaattagcagggcacccctcgccctcggtaca 45163824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 275 - 518
Target Start/End: Complemental strand, 17551210 - 17550972
Alignment:
Q  275 aaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacattt 374  Q
    ||||| |||| |||| ||| ||||||| |||||||||||  || ||||||||| | |||||||||||| |||||  ||||||||||||||||||||||||    
T  17551210 aaacaaggtaaccaccaccgcccatcgtcactactcaccgacaaagaacaccc-tcaaaataaaactctcagaccccaacacccaaactgagccacattt 17551112  T
Q  375 caaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagc 472  Q
    | || ||| |||||||     | || ||||||  ||||| |||| ||||| ||||| || ||||||||||||| ||||| | | |||||||||||| ||     
T  17551111 cgaagagcacctaacc-----atcatgcagctatcacaaacctcgcgacctccgatgcatcgaaagagcacaacacaaa-gcccaaaaaccaacttgagt 17551018  T
Q  473 aaaagagctgactcccgatctcgaatcaaaagtgatcggcccacca 518  Q
     ||||| |||||||||||||||||||||||||||||||||||||||    
T  17551017 caaagaactgactcccgatctcgaatcaaaagtgatcggcccacca 17550972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 269 - 670
Target Start/End: Original strand, 2394087 - 2394474
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||||| || | ||||||    ||||||||||||| ||||  |||||||||| |||||||    
T  2394087 cactgtaaacacggtatccaccaccgcccatcgtcactactcacccacaaataacacctac-aaaataaaactcctagaccccaacacccaagctgagcc 2394185  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||||  || || ||||||||||| || || ||||||  ||||| |||| ||||| ||||||||||||                   | ||||||||||    
T  2394186 acattttgaagagatcctaaccgaaggatcatgcagctagcacaaacctcgcgacctccgatccaccgac------------------ccaaaaaccaac 2394267  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    || ||  ||||| |||||| || |||||||||||||||||||||| ||||||  || ||| ||||||| |||||||||||||| ||||||||||||||||    
T  2394268 ttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccctcgcccccggtacaccag 2394367  T
Q  567 ag-aacaacatatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgt 663  Q
    || || | || | ||||||||||| | ||| || ||||||  | |||| |||||| ||||| |||| ||||| | ||  | |||||||||||||||||||    
T  2394368 agtaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaaaccagcacacaatatgt 2394467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 269 - 502
Target Start/End: Complemental strand, 47235962 - 47235729
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||||||||||||||| |||  |||||| |||||||||||| || |||||| |||| |||||||||||| |||||  |||||||||| |||| ||    
T  47235962 cactgtaaacacggtatccaccaccgtccatcgtcactactcacccacaaagaaca-ccctcaaaataaaactcgcagaccccaacacccaagctgaacc 47235864  T
Q  369 acatttc-aaaagctcctaaccgaatgaacaagcagcttccac-aacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||||| || ||| |||||||||| || || ||||||  ||| |||||| ||||| | ||||||||||||||||| || || |||| | ||||||||||    
T  47235863 acatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctctgatccaccgaaagagcaaaacac-aaagcccaaaaaccaac 47235765  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaa 502  Q
    || ||  ||||| | ||||| |||||||||||||||    
T  47235764 ttaagtcaaagaaccgactctcgatctcgaatcaaa 47235729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 354 - 658
Target Start/End: Complemental strand, 25647863 - 25647557
Alignment:
Q  354 cacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaag 453  Q
    |||| |||||||||||| |   |||||||| |||||||| || ||  || ||| ||| ||||||||||| |||||||||| |||||   || ||  ||||    
T  25647863 caccaaaactgagccacgtccgaaaagctcataaccgaaagatcattcaactttcaccacctctcgacctccgatccaccaaaagaaaccataa--aaag 25647766  T
Q  454 gctaaaaaccaa--cttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttg 551  Q
     |||||| | ||  ||| ||| ||||| |  |||||||||||||||||||||||||| |||||  || ||||||| |||||||||| ||||||||| |      
T  25647765 cctaaaaccaaaaacttaagccaaagaaccaactcccgatctcgaatcaaaagtgataggcccgtcagactttaggaccaaatcagaagggcacccttca 25647666  T
Q  552 cccccggtacaccagag-aacaacatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaacc 649  Q
    | ||||||||||||||| |||| || |||| | |||||| |||| || ||||||| | |||| || ||||||||||||| |||||||| ||  |||||||    
T  25647665 ctcccggtacaccagagaaacaccaaatcacgccaaacagaattgcagctagacaccgactcccgttctcgaagcaaaagtaaccggcccatcggaaacc 25647566  T
Q  650 agcacacaa 658  Q
    | |||||||    
T  25647565 aacacacaa 25647557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 269 - 547
Target Start/End: Complemental strand, 14879701 - 14879421
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaa---caccccttaaaataaaactcccagacttcaacacccaaactga 365  Q
    ||||| ||| ||| ||||||  ||||| ||||| ||||| ||||||| | ||||   ||||||| ||||| |||||||||||||| |||||| || | ||    
T  14879701 cactgaaaaaacgatatccaacaccacacatcgtcactattcaccccgaaagaaaaacacccctcaaaattaaactcccagacttgaacaccaaacccga 14879602  T
Q  366 gccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaa 465  Q
    |||||||   ||||||||||| | ||| || ||   ||||||||| ||||||||||| || |||||||||||||   || ||  |||| | |||| | ||    
T  14879601 gccacatccgaaaagctcctatctgaaagatcattaagcttccaccacctctcgacctcctatccaccgaaagaaaccataa--aaagtccaaaaccaaa 14879504  T
Q  466 -cttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccc 547  Q
     ||| | | || || | ||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||||||    
T  14879503 acttgatccaacgaacagactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacccaatcagaagggcaccc 14879421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 272 - 551
Target Start/End: Complemental strand, 31483144 - 31482866
Alignment:
Q  272 tgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccaca 371  Q
    |||||||| ||||||||| ||    ||||| ||||||| |||| || ||||||||| |||||| ||||||| || ||  ||||||| || ||||||||||    
T  31483144 tgtaaacatggtatccaccactgttcatcgtcactactaacccacaaagaacaccc-ttaaaa-aaaactctcaaaccccaacacctaagctgagccaca 31483047  T
Q  372 tttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttc 469  Q
    |||| || ||| |||||||||| || || ||||||  ||||| |||| ||||| || ||||||||||||||||||| || |||| | ||||| ||||||     
T  31483046 tttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctccaatccaccgaaagagcacaacac-aaagcccaaaaatcaactta 31482948  T
Q  470 agcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttg 551  Q
    |    ||||  ||| ||||||||||||||||||||||||| |||| ||| ||| ||||||||||| || |||| ||||||||    
T  31482947 attttaagatttgattcccgatctcgaatcaaaagtgatccgcccgccagactatagaaccaaattagtagggtaccccttg 31482866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 474 - 629
Target Start/End: Complemental strand, 37123441 - 37123285
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aaca 572  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| |||||| ||  |||||||||||  ||  ||||||| ||||| ||||    
T  37123441 aaagaactgactcccaatctcgaatcaaaagtgatcggcccaccaaaatttaggaccaaaacataagggcacccctctccttcggtacatcagagaaaca 37123342  T
Q  573 acatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa 629  Q
     || |||| | |||||| |||| || ||||||| | |||| ||||||||||||||||    
T  37123341 ccaaatcacgccaaacaaaattgcagctagacaccgactcccgatctcgaagcaaaa 37123285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 269 - 468
Target Start/End: Complemental strand, 53248165 - 53247965
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaat-aaaactcccagacttcaacacccaaactgagc 367  Q
    |||||||||||||||| |||| ||| ||||||| |||||||||||| || |||||| | || ||||| ||||||| |||||  |||||||||||||||||    
T  53248165 cactgtaaacacggtaaccaccaccgcccatcgtcactactcacccacaaagaaca-ctctcaaaataaaaactctcagaccccaacacccaaactgagc 53248067  T
Q  368 cacatttc-aaaagctcctaaccgaatgaacaagcagcttccac-aacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaa 465  Q
    |||||||| || ||| | |||||||| || ||  || ||  ||| |||||| ||||| || ||||||||||||||||||| ||||||  |||||||||||    
T  53248066 cacatttcgaagagcacataaccgaaggatcatacaactatcacaaacctcgcgacctccaatccaccgaaagagcacaacacaaaa-tctaaaaaccaa 53247968  T
Q  466 ctt 468  Q
    |||    
T  53247967 ctt 53247965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 483 - 570
Target Start/End: Original strand, 30935421 - 30935508
Alignment:
Q  483 actcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||||||||| |||||||||| |||| ||||||||||||| | ||||||||||| |||||||||||| |||||||| ||||||||||    
T  30935421 actcccgatcttgaatcaaaagcgatcagcccaccaaacttcaaaaccaaatcagaagggcaccccttacccccggtccaccagagaa 30935508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 464 - 572
Target Start/End: Complemental strand, 14194009 - 14193901
Alignment:
Q  464 aacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacac 563  Q
    ||||| ||| ||||| | ||||||| |||||||||||||||||||||| || ||| ||||||| |||||||||| |||||||||||  | ||||||||||    
T  14194009 aacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggaccaaatcagaagggcacccctcactcccggtacac 14193910  T
Q  564 cagagaaca 572  Q
    || ||||||    
T  14193909 caaagaaca 14193901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 270 - 373
Target Start/End: Original strand, 30352259 - 30352359
Alignment:
Q  270 actgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcca 369  Q
    |||||||||||||||||||| ||||||||||| ||||||||| || || |||||||||  ||||| |||||||| ||||  |||||||||| ||||||||    
T  30352259 actgtaaacacggtatccaccaccacccatcgtcactactcatccacaaagaacaccc--taaaa-aaaactccgagaccccaacacccaagctgagcca 30352355  T
Q  370 catt 373  Q
    ||||    
T  30352356 catt 30352359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 480 - 630
Target Start/End: Original strand, 823463 - 823614
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aacaacatat 578  Q
    ||||||| ||||||||||||||||||||||||||||  |  ||| | ||||||||  | ||||||||| || ||| |||| |||||||| |||| ||||     
T  823463 ctgactctcgatctcgaatcaaaagtgatcggcccattagtcttcataaccaaatttgaagggcaccctttacccacggtccaccagagaaacaccataa 823562  T
Q  579 caagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaat 630  Q
    |||| ||||||  ||| |||||||||| ||||||  ||||| ||||||||||    
T  823563 caagccaaacaagattgcaactagacaccaactcctgatcttgaagcaaaat 823614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 480 - 570
Target Start/End: Complemental strand, 47945759 - 47945668
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgccccc-ggtacaccagagaa 570  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| ||| || |||  ||||||||||| ||||| ||| ||||||||||    
T  47945759 ctgactcccgatctcgaatcaaaagtgatcggcccaccggactttaggacccaaccagacgggcaccccttaccccctggtccaccagagaa 47945668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 269 - 346
Target Start/End: Complemental strand, 7105105 - 7105028
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccag 346  Q
    |||| |||| || |||||||| ||||||||||| ||||||||||||| |   ||||||||||||||||||||||||||    
T  7105105 cactataaaaacagtatccaccaccacccatcgtcactactcaccccaaagaaacaccccttaaaataaaactcccag 7105028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 474 - 570
Target Start/End: Original strand, 14755287 - 14755381
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||| |||||||||||||| |||||||||||||||||||||||| ||||||| || |||  |  |||||||||||  ||  |||||||||||||||    
T  14755287 aaagaactgactcccgatcttgaatcaaaagtgatcggcccaccagactttagcacaaaa--aaaagggcacccctcaccttcggtacaccagagaa 14755381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 201 - 276
Target Start/End: Original strand, 50305325 - 50305401
Alignment:
Q  201 taaagcctctgaagataa-cccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaa 276  Q
    ||||||| |||||||||| ||||||||| |||  || ||||||||||| ||||||||||||||||||||||| ||||    
T  50305325 taaagcccctgaagataaacccaccaaaacactacaccacctaagacgaacaccttaacagaaacaaaacaccgtaa 50305401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 474 - 518
Target Start/End: Original strand, 39021298 - 39021342
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccacca 518  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||    
T  39021298 aaagaactgactcccgacctcgaatcaaaagtgatcggcccacca 39021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 484 - 523
Target Start/End: Original strand, 20710740 - 20710779
Alignment:
Q  484 ctcccgatctcgaatcaaaagtgatcggcccaccaaactt 523  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  20710740 ctcccgatctcgaatcaaaagtgatcggcccaccagactt 20710779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 548
Target Start/End: Complemental strand, 5556629 - 5556555
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccc 548  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||| |||  |  |||||||||  ||||||||||    
T  5556629 aaagaactgactcccgatctcgaatcaaaagcgatcgccccaccagactacaagaccaaatcaaaagggcacccc 5556555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 480 - 550
Target Start/End: Original strand, 24099355 - 24099425
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccctt 550  Q
    |||| ||||||| |||||||||||||||||||||||||| ||| || || |||||||  | ||||||||||    
T  24099355 ctgattcccgatatcgaatcaaaagtgatcggcccaccagactctataaacaaatcattaaggcacccctt 24099425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 474 - 523
Target Start/End: Original strand, 33143971 - 33144020
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactt 523  Q
    ||||| |||||||||||||||||||||||||||||||  |||||| ||||    
T  33143971 aaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagactt 33144020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 39021052 - 39021089
Alignment:
Q  209 ctgaagataacccaccaaatcacatcatcacctaagac 246  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  39021052 ctgaagataacccaccaaatcacatcaccacctaagac 39021089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 474 - 537
Target Start/End: Original strand, 1652908 - 1652971
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcag 537  Q
    ||||| || ||||| |||||||||||||||||||||||||||| | | || || ||||||||||    
T  1652908 aaagaactaactcctgatctcgaatcaaaagtgatcggcccacaagagttcaggaccaaatcag 1652971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 4170989 - 4170889
Alignment:
Q  289 caaccacccatcgccactactcacccccat---agaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcct 385  Q
    |||||| |||||| |||||||||||||| |   | ||||||||| ||| |||||||| ||| | | |||||| || ||||||||||| || |||||||||    
T  4170989 caaccatccatcgtcactactcacccccttctaaaaacacccctcaaagtaaaactctcagtccttaacaccaaagctgagccacatctccaaagctcct 4170890  T
Q  386 a 386  Q
    |    
T  4170889 a 4170889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 480 - 518
Target Start/End: Complemental strand, 30127315 - 30127277
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccacca 518  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  30127315 ctgactcccgatctcgaatcaaaagcgatcggctcacca 30127277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 439
Target Start/End: Original strand, 28937530 - 28937703
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcaccccc----atagaacaccccttaaaataaaactcccagacttcaacacccaaactg 364  Q
    ||||||||| ||| ||||||  ||||||||||||||||||||||| ||    | | ||||||||| ||||  ||||||| |||| | ||||  |||| ||    
T  28937530 cactgtaaaaacgatatccaataccacccatcgccactactcacctccaagtaaaaaacacccctaaaaaacaaactcctagacctgaaca-tcaaagtg 28937628  T
Q  365 agccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaaga 439  Q
    ||||||||   ||||||||||  | |||  | ||  |||||||||| | |||| |||| ||||||||||||||||    
T  28937629 agccacatccaaaaagctcctccctgaaacatcattcagcttccaccatctcttgacctccgatccaccgaaaga 28937703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 549
Target Start/End: Complemental strand, 31424289 - 31424220
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccct 549  Q
    ||||||||||||||||||||||||| || ||||| |||| ||| |  || |||||||| | |||||||||    
T  31424289 ctgactcccgatctcgaatcaaaagcgaccggcctaccagactctgaaaacaaatcagtaaggcacccct 31424220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 236 - 695
Target Start/End: Complemental strand, 7874586 - 7874129
Alignment:
Q  236 tcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaat 335  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||| | |||||| |||| |||||    
T  7874586 tcacctaagacggacaccttgacagaaacaaa-cactgtaaacacagtatccacaaccacccatcgtcactactcaccccaa-agaacatccctcaaaat 7874489  T
Q  336 aaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccga 435  Q
    |||||||| |||||||||||||||| ||||||||||||  |||||||||||||| |||||||||| || |||||||||||||||||| ||||||||||||    
T  7874488 aaaactccaagacttcaacacccaagctgagccacattcgaaaagctcctaaccaaatgaacaagtagtttccacaacctctcgacctccgatccaccga 7874389  T
Q  436 aagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatc 535  Q
    | |||||||||||||||| | |||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  7874388 atgagcacaaaacaaaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcgacccaccagactttagaaccaaatc 7874289  T
Q  536 agcagggcaccccttgcccccggtacaccagagaacaacatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagc-aaaataacc 634  Q
    |||||||||||| | |||| |||||||| |||||||| ||||||||||||| ||  ||| || ||||||| |||||| |||||||||||| |||| ||||    
T  7874288 agcagggcacccatcgccctcggtacactagagaacaccatatcaagtcaagcaggattgcagctagacaccaactcccgatctcgaagcaaaaaaaacc 7874189  T
Q  635 ggctcactggaaaccagcacacaatatgtaagacgataaacaatgatatgcgattggtgca 695  Q
    ||| ||| ||| ||||||||||||||| |||||||||| || |||||||||||||||||||    
T  7874188 ggcccaccggacaccagcacacaatatttaagacgatagac-atgatatgcgattggtgca 7874129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 203 - 660
Target Start/End: Original strand, 14106274 - 14106734
Alignment:
Q  203 aagcctctgaagataacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgc 302  Q
    ||||| ||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||| |||||     
T  14106274 aagcccctgaagataacccaccaaaacacaacaccacctaagacggacaccttaacagaaacaaa-cattgtaaacacagtatccacaaccactcatcgt 14106372  T
Q  303 cactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagca 402  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||   ||||||| ||||||||||| ||  ||    
T  14106373 cactactcacccccaaagaacacccctcaaaataaaactctcagacttcaacacccaagctgagccacattcgtaaagctcttaaccgaatgatcataca 14106472  T
Q  403 gcttccacaacctctcgaccaccgatccaccgaaagagcac-aaaacaaaaggctaaaaacc-aacttcagcaaaagagctgactcccgatctcgaatca 500  Q
     ||||||||||||||||||| | |||||||||||||||||| |||||||||  | ||||||| ||  | | | |||||||||||||||||||| ||||||    
T  14106473 acttccacaacctctcgacctctgatccaccgaaagagcacaaaaacaaaaacccaaaaaccaaaactgatctaaagagctgactcccgatcttgaatca 14106572  T
Q  501 aaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccaga-gaacaacatatcaagtcaaacataattccaac 599  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||| ||||  ||||||  ||| ||||| || |||||||||||||  ||| || |    
T  14106573 aaagtgatcggcccaccagactttaggaccaaatcagcagggcacccctcgccctgggtacatgagaggaacaccaaatcaagtcaaacaggattgcagc 14106672  T
Q  600 tagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaata 660  Q
    ||| || | |||| |  ||||||||||||| |||||||| ||| |||||||| |||||||||    
T  14106673 tagtcaccgactccctgtctcgaagcaaaagtaaccggcccaccggaaaccaacacacaata 14106734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 217 - 529
Target Start/End: Complemental strand, 5254566 - 5254260
Alignment:
Q  217 aacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactactcaccccc 316  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||      
T  5254566 aacccaccaaaacacatcaccacctaagacggacaccttaacagaaacaaa-cactgtaaacacagtatccacaaccacccatcgtcactactcaccc-- 5254470  T
Q  317 atagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctc 416  Q
    | ||||||||||| ||||   ||||| ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||| |||||||||||||||||    
T  5254469 aaagaacacccctcaaaa---aactctcagacttcaacacccaaactgagccacattcgaaaagctccaaaccgaatgaacatgcagcttccacaacctc 5254373  T
Q  417 tcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccac 516  Q
    |||||| |||||||||||||| ||||||||||||||| |  ||||||||||| | | ||||||| ||||||||||||| ||| |||||||||||||||||    
T  5254372 tcgacctccgatccaccgaaaaagcacaaaacaaaagcccgaaaaccaacttgaaccaaagagcagactcccgatctcaaattaaaagtgatcggcccac 5254273  T
Q  517 caaactttagaac 529  Q
     | ||||||||||    
T  5254272 tagactttagaac 5254260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 202 - 577
Target Start/End: Complemental strand, 14405528 - 14405155
Alignment:
Q  202 aaagcctctgaagataacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaa-cacggtatccacaaccacccatc 300  Q
    |||||| || ||||||||| |||||| ||||||| ||||||||||||||||||||||| ||| ||| |||| |||| ||| ||  |||||| |||||||     
T  14405528 aaagcccctaaagataacctaccaaaacacatcaccacctaagacggacaccttaacaaaaataaa-cactataaaacacagt--ccacaatcacccatt 14405432  T
Q  301 gccactactcacccccata-gaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaa 399  Q
    | ||||||||||||||| | ||||| |||| ||||||||||||||||||||||||||||||   |||||||||   | |||||||||||| |||||||      
T  14405431 gtcactactcacccccaaaagaacatccctcaaaataaaactcccagacttcaacacccaagtcgagccacatgcgacaagctcctaaccaaatgaacgt 14405332  T
Q  400 gcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatc 499  Q
    |||| |||||||||| ||||||  | |||||||||||||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||||    
T  14405331 gcagtttccacaaccactcgacttctgatccaccgaaagagcacaaaacaaaagcccaaaaaccaacttgagccaaagagctgactcccgatctcgaatc 14405232  T
Q  500 aaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaacata 577  Q
    ||||||||||||||||||| ||||||||||||||||| ||  |||||||| |||||||||||||||||||||||||||    
T  14405231 aaaagtgatcggcccaccagactttagaaccaaatcatca-agcacccctcgcccccggtacaccagagaacaacata 14405155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 269 - 670
Target Start/End: Original strand, 39338683 - 39339086
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||||| | ||||||| | | ||||||| |||||||||||| || ||||||||| | |||||||||||||||||| ||||||||||| ||||| |    
T  39338683 cactgtaaacaag-tatccaccatcgcccatcgtcactactcacccacaaagaacaccc-tcaaaataaaactcccagacctcaacacccaagctgagtc 39338780  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||| ||| || ||| |||||||||| || ||  |||||  ||||| |||| ||||| |||||||||||||||||||||| ||||| | | ||||||||||    
T  39338781 acaattcgaagagcacctaaccgaaggatcattcagctatcacaaacctcgcgacctccgatccaccgaaagagcacaacacaaa-gcccaaaaaccaac 39338879  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    || ||  ||||| ||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||| |||||||||||||| |||||||||||||||     
T  39338880 ttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagactatagtaccaaattagcagggcacccctcgcccccggtacaccaa 39338979  T
Q  567 agaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgt 663  Q
    |||| || || ||||||||||||| | ||| || ||||||  | |||| |||||||||||| |||| ||| ||| ||| | |||||||||||||||||||    
T  39338980 agaaaaaccaaatcaagtcaaacaaatattgcagctagaccccgactcccgatctcgaagccaaatgaactggcccaccgaaaaccagcacacaatatgt 39339079  T
Q  664 aagacga 670  Q
    |||||||    
T  39339080 aagacga 39339086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 217 - 555
Target Start/End: Complemental strand, 387489 - 387151
Alignment:
Q  217 aacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactactcaccccc 316  Q
    ||||||||||| ||||||| ||||||| || ||| |||| ||| ||||||  || |||||||||   || ||| ||| ||||||| ||||| ||||||||    
T  387489 aacccaccaaaacacatcaccacctaaaacagactccttcacaaaaacaag-cattgtaaacacaaaattcaccaccgcccatcgtcactattcaccccc 387391  T
Q  317 atagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaa-agctcctaaccgaatgaacaagcagcttccacaacct 415  Q
    | ||||||||| | ||||||||||||||||||  |||||||||| ||||||||| | || || ||| ||| || ||||||||| |||||||||| |||||    
T  387390 aaagaacaccc-tcaaaataaaactcccagaccccaacacccaagctgagccacctatcgaagagcacctgactgaatgaacatgcagcttccaaaacct 387292  T
Q  416 ctcgaccaccgatccaccgaaagagcacaaaacaaaaggct-aaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggccc 514  Q
    |  |||| |||||||||| |||||||||||||  ||| ||| |||||||||||| ||  |||||  |||||||||||||| |||||||||||||| ||||    
T  387291 cgtgacctccgatccaccaaaagagcacaaaaacaaaagctcaaaaaccaacttgagtcaaagaattgactcccgatctcaaatcaaaagtgatcagccc 387192  T
Q  515 accaaactttagaaccaaatcagcagggcaccccttgcccc 555  Q
    |||| ||||||| ||||||| |||||||||||||| |||||    
T  387191 accagactttagtaccaaattagcagggcacccctcgcccc 387151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 203 - 374
Target Start/End: Complemental strand, 7461005 - 7460835
Alignment:
Q  203 aagcctctgaagataacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgc 302  Q
    ||||| |||||||||||||||||||||||| || | ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||||     
T  7461005 aagcccctgaagataacccaccaaatcacaacaccgcctaagacggacaccttaacagaaacaaa-cactgtaaacacaatatccacaaccacacatcgt 7460907  T
Q  303 cactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacattt 374  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  7460906 cactactcaaccccaaagaacacccctcaaaataaaactcccagacttcaacacccaagctgagccacattt 7460835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 273 - 667
Target Start/End: Complemental strand, 10524360 - 10523960
Alignment:
Q  273 gtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacat 372  Q
    ||||||||||||||||| ||| ||||||| |||||||||||| || ||||||||| |  |||||||||||||| ||  |||||||||| |||||||||||    
T  10524360 gtaaacacggtatccaccaccgcccatcgtcactactcacccacaaagaacaccc-tccaaataaaactcccaaaccccaacacccaagctgagccacat 10524262  T
Q  373 ttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttca 470  Q
     || || ||| |||||||||| || || ||||||  ||||| |||| ||||| |||| | ||||||||||||||| ||||| | | |||||||||||| |    
T  10524261 atcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctccgaac-accgaaagagcacaacacaaa-gcccaaaaaccaacttga 10524164  T
Q  471 gcaaaagagc----tgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    |  |||||      |||||||||||||||||||||||||||||||||||||| ||| ||| |||||||  |||||||||| || |||||| ||| |||||    
T  10524163 gtcaaagaatatattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggcagggcacctctcgcccccagtagaccag 10524064  T
Q  567 agaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgt 663  Q
    |||| || || ||||||||||||| | ||| ||||||||   | |||| |||||||||||| |||| ||||||  ||| | |||||||||||||||||||    
T  10524063 agaaaaaccaaatcaagtcaaacaaagattgcaactagagcccgactcccgatctcgaagccaaatgaaccggtccaccgaaaaccagcacacaatatgt 10523964  T
Q  664 aaga 667  Q
    ||||    
T  10523963 aaga 10523960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 291 - 668
Target Start/End: Original strand, 16952223 - 16952600
Alignment:
Q  291 accacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccg 390  Q
    ||||| ||||| ||||||||||||||| |||||||||||  |||| |||||||||| | |||||||| ||  ||| ||||||   ||||||||||| |||    
T  16952223 accactcatcgtcactactcacccccaaagaacacccctctaaatgaaactcccagtcctcaacaccaaagttgatccacatccgaaaagctcctatccg 16952322  T
Q  391 aatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccga 490  Q
    || || |    ||||||||| ||||||| ||| |||||||||||||||| ||| ||| ||| | | |||| | ||||| ||| ||||| ||| |||||||    
T  16952323 aaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaa-aaatgtccaaaaccaaacttgagccaaagaactggctcccga 16952421  T
Q  491 tctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aacaacatatcaagtcaaaca 589  Q
    |||||||||||||  |||||||  | ||  |||||| | ||| |||| |||| ||||| |  ||||||| ||| |||| ||||  |||||||  | ||||    
T  16952422 tctcgaatcaaaaaagatcggcttagcagtctttaggaacaattcagaagggaacccc-taaccccggtccactagagaaacacgatatcaaacccaaca 16952520  T
Q  590 taattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaagac 668  Q
      ||| |||||| |||  ||||||||||||||||| |||| ||||| |  ||  | ||||||||||||||||||||||||    
T  16952521 agattgcaactacacacaaactctcgatctcgaagtaaaagtaaccagtccatcgaaaaccagcacacaatatgtaagac 16952600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 291 - 668
Target Start/End: Original strand, 17022888 - 17023265
Alignment:
Q  291 accacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccg 390  Q
    ||||| ||||| ||||||||||||||| |||||||||||  |||| |||||||||| | |||||||| ||  ||| ||||||   ||||||||||| |||    
T  17022888 accactcatcgtcactactcacccccaaagaacacccctctaaatgaaactcccagtcctcaacaccaaagttgatccacatccgaaaagctcctatccg 17022987  T
Q  391 aatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccga 490  Q
    || || |    ||||||||| ||||||| ||| |||||||||||||||| ||| ||| ||| | | |||| | ||||| ||| ||||| ||| |||||||    
T  17022988 aaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaa-aaatgtccaaaaccaaacttgagccaaagaactggctcccga 17023086  T
Q  491 tctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aacaacatatcaagtcaaaca 589  Q
    |||||||||||||  |||||||  | ||  |||||| | ||| |||| |||| ||||| |  ||||||| ||| |||| ||||  |||||||  | ||||    
T  17023087 tctcgaatcaaaaaagatcggcttagcagtctttaggaacaattcagaagggaacccc-taaccccggtccactagagaaacacgatatcaaacccaaca 17023185  T
Q  590 taattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaagac 668  Q
      ||| |||||| |||  ||||||||||||||||| |||| ||||| |  ||  | ||||||||||||||||||||||||    
T  17023186 agattgcaactacacacaaactctcgatctcgaagtaaaagtaaccagtccatcgaaaaccagcacacaatatgtaagac 17023265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 291 - 668
Target Start/End: Original strand, 17060194 - 17060571
Alignment:
Q  291 accacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccg 390  Q
    ||||| ||||| ||||||||||||||| |||||||||||  |||| |||||||||| | |||||||| ||  ||| ||||||   ||||||||||| |||    
T  17060194 accactcatcgtcactactcacccccaaagaacacccctctaaatgaaactcccagtcctcaacaccaaagttgatccacatccgaaaagctcctatccg 17060293  T
Q  391 aatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccga 490  Q
    || || |    ||||||||| ||||||| ||| |||||||||||||||| ||| ||| ||| | | |||| | ||||| ||| ||||| ||| |||||||    
T  17060294 aaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaa-aaatgtccaaaaccaaacttgagccaaagaactggctcccga 17060392  T
Q  491 tctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aacaacatatcaagtcaaaca 589  Q
    |||||||||||||  |||||||  | ||  |||||| | ||| |||| |||| ||||| |  ||||||| ||| |||| ||||  |||||||  | ||||    
T  17060393 tctcgaatcaaaaaagatcggcttagcagtctttaggaacaattcagaagggaacccc-taaccccggtccactagagaaacacgatatcaaacccaaca 17060491  T
Q  590 taattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaagac 668  Q
      ||| |||||| |||  ||||||||||||||||| |||| ||||| |  ||  | ||||||||||||||||||||||||    
T  17060492 agattgcaactacacacaaactctcgatctcgaagtaaaagtaaccagtccatcgaaaaccagcacacaatatgtaagac 17060571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 270 - 570
Target Start/End: Original strand, 10173398 - 10173696
Alignment:
Q  270 actgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcca 369  Q
    |||||||| ||| ||| ||  ||||| ||||| ||||||||||||| | |||| || ||| ||||| |||||| ||| | |||||||| || ||||||||    
T  10173398 actgtaaaaacgatatacaacaccactcatcgtcactactcaccccaa-agaatactcctcaaaattaaactctcagtcctcaacaccaaagctgagcca 10173496  T
Q  370 catttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttc 469  Q
    |||   |||||||| ||  | || || ||  || ||||||| ||||||||||| ||||| |||||||||| ||| || |||||| | |||| | |||||     
T  10173497 catccgaaaagctcatattcaaaagatcattcaacttccaccacctctcgacctccgattcaccgaaagaacaccaa-caaaagcccaaaaccaaacttg 10173595  T
Q  470 agcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagaga 569  Q
    ||| ||| | || ||| |||||||||||||||||||||||||||||| | ||||||| |||||| ||  || |||||| |  || | |||||||||||||    
T  10173596 agccaaataacttacttccgatctcgaatcaaaagtgatcggcccactagactttaggaccaaaacaaaagagcacccttcacctctggtacaccagaga 10173695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 14437025 - 14437092
Alignment:
Q  209 ctgaagataacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaa 277  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  14437025 ctgaagataacccaccaaatcacatcatcacctaagacgaacaccttaacagaaac-aaacactgtaaa 14437092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 549
Target Start/End: Complemental strand, 1269552 - 1269467
Alignment:
Q  464 aacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccct 549  Q
    ||||| ||| ||||| |||||| |||||||||||||||||||||||||||||||| ||||||| || ||||||| |||||||||||    
T  1269552 aacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccct 1269467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 37770670 - 37770759
Alignment:
Q  481 tgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||||| ||||  ||||||||||||||||||||||||||| |||| ||||||||||  ||||||||||  ||| |||||||||||||||    
T  37770670 tgactcctgatccagaatcaaaagtgatcggcccaccaaaccttaggaccaaatcagatgggcacccctcaccctcggtacaccagagaa 37770759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 269 - 466
Target Start/End: Original strand, 17116696 - 17116894
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaat-aaaactcccagacttcaacacccaaactgagc 367  Q
    ||||||||||||||||||||| ||| ||||||| || ||||||||| || |||||| |||| ||||| ||||||| |||||  |||||||||| ||||||    
T  17116696 cactgtaaacacggtatccaccaccgcccatcgtcattactcacccacaaagaaca-ccctcaaaataaaaactctcagaccccaacacccaagctgagc 17116794  T
Q  368 cacatttc-aaaagctcctaaccgaatgaacaagcagcttccac-aacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaa 465  Q
    |||||| | || ||| |||||||||  || |||| || |  ||| |||||| ||||| || ||| | ||||| |||||||||| |||| |||||||||||    
T  17116795 cacattacgaagagcacctaaccgatggatcaagtagatatcacaaacctcgcgacctccaatctatcgaaaaagcacaaaac-aaagcctaaaaaccaa 17116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 475 - 667
Target Start/End: Complemental strand, 17105470 - 17105275
Alignment:
Q  475 aagagctgactcccgatctcgaatcaaaa-gtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aaca 572  Q
    |||| |||| || |||||||||||||||| |||||||||||| || |||| || |||||||||| |||||||||||  |||| ||||||||| || ||||    
T  17105470 aagatctgattctcgatctcgaatcaaaaagtgatcggcccatcagacttcagtaccaaatcagtagggcacccctcacccctggtacaccaaagaaaca 17105371  T
Q  573 acatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaaga 667  Q
     |  || ||||||||||   || || ||||||  | ||||   ||||| |||||||| |||||| | ||| |||||||||||||||||||||||||    
T  17105370 cctaattaagtcaaacaaggttgcagctagacgccgactccttatctccaagcaaaagtaaccgacccaccggaaaccagcacacaatatgtaaga 17105275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 474 - 549
Target Start/End: Original strand, 22885155 - 22885229
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccct 549  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||| || | |||| |||| ||||||||||    
T  22885155 aaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacttcaggatcaaaccagc-gggcacccct 22885229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 480 - 570
Target Start/End: Complemental strand, 18681118 - 18681028
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||||||||||||||||||||| |  |||||||||||| |||| | ||||||||||| ||||||  |||| |||||||| ||| ||||||    
T  18681118 ctgactcccgatctcgaatcaaatgcaatcggcccaccatacttcataaccaaatcagaagggcagtccttacccccggtccactagagaa 18681028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 549
Target Start/End: Original strand, 9560820 - 9560885
Alignment:
Q  484 ctcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccct 549  Q
    |||||||||||||||||||||||||||| |||||||||||| ||  ||||||| || |||||||||    
T  9560820 ctcccgatctcgaatcaaaagtgatcggtccaccaaactttcgacacaaatcatcaaggcacccct 9560885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 474 - 570
Target Start/End: Complemental strand, 4471982 - 4471887
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||| |||  || |||||| |||  |||| |||||| |||||||| ||||||||||    
T  4471982 aaagaactgactcccgatctcgaatcaaaggcgatcggcccaccagactccaggaccaaaccagacgggc-ccccttacccccggtccaccagagaa 4471887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 474 - 570
Target Start/End: Complemental strand, 13337333 - 13337237
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||| |||||| ||||| ||||||||||||||||||||||| || ||||||    |||||||| |||||||||| |  ||| ||||||||||||||    
T  13337333 aaagaactgacttccgatttcgaatcaaaagtgatcggcccatcagactttaaggtcaaatcagaagggcaccccctcaccctggtacaccagagaa 13337237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 482 - 570
Target Start/End: Original strand, 15126440 - 15126528
Alignment:
Q  482 gactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    |||||||||||||||||||||| |||||||||||||| |||| || ||| ||  ||  ||| ||||||| |||||||| ||||||||||    
T  15126440 gactcccgatctcgaatcaaaaatgatcggcccaccagacttcaggacccaacgagacgggaaccccttacccccggtccaccagagaa 15126528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 518
Target Start/End: Complemental strand, 2062958 - 2062904
Alignment:
Q  464 aacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccacca 518  Q
    ||||| ||| |||||||||||||||||||||||||||||||  ||||||||||||    
T  2062958 aacttgagccaaagagctgactcccgatctcgaatcaaaagcaatcggcccacca 2062904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 526
Target Start/End: Complemental strand, 16960051 - 16959989
Alignment:
Q  464 aacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttag 526  Q
    ||||| ||| ||||| ||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  16960051 aacttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagactttag 16959989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 570
Target Start/End: Original strand, 31902442 - 31902532
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||||||||||||||||| ||||| ||| ||||||||| |||| || | ||||| || ||| |||||||  |||||||| ||||||||||    
T  31902442 ctgactcccgatctcgaattaaaagcgattggcccaccagacttcagcatcaaataagaaggacacccctaacccccggtccaccagagaa 31902532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 658
Target Start/End: Original strand, 41086825 - 41086994
Alignment:
Q  489 gatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaacatatcaagtcaaac 588  Q
    |||||||||||||||||||| | ||||||| ||| ||  |||||||||| |||||| ||||  |||| |||||||||||||||| || |||| | |||||    
T  41086825 gatctcgaatcaaaagtgattgacccaccagactatatgaccaaatcagaagggca-ccctcacccctggtacaccagagaacaccaaatcacgccaaac 41086923  T
Q  589 ataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaa 658  Q
    | ||||  | || |||| | | || ||||||| |||||||| ||| |||  ||| ||||||| ||||||||    
T  41086924 aaaattgtagctggacaccgattcccgatctcaaagcaaaagtaatcggtccaccggaaacctgcacacaa 41086994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 534
Target Start/End: Complemental strand, 23650437 - 23650384
Alignment:
Q  481 tgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaat 534  Q
    |||||||||||||||||||||||| |||| |||||||| ||| |||||||||||    
T  23650437 tgactcccgatctcgaatcaaaagcgatcagcccaccagactctagaaccaaat 23650384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 525
Target Start/End: Complemental strand, 34230331 - 34230209
Alignment:
Q  401 cagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatca 500  Q
    |||||||||| ||||||| ||| ||||||||||||||||   || ||  |||| | |||| | ||||| | | ||||| |||||||| |||||||||| |    
T  34230331 cagcttccaccacctctcaacctccgatccaccgaaagaaaccacaa--aaagcccaaaatcaaacttgatccaaagaactgactcctgatctcgaataa 34230234  T
Q  501 aaagtgatcggcccaccaaacttta 525  Q
    ||| ||||||||||| |||||||||    
T  34230233 aaaatgatcggcccatcaaacttta 34230209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 478 - 518
Target Start/End: Original strand, 4162046 - 4162086
Alignment:
Q  478 agctgactcccgatctcgaatcaaaagtgatcggcccacca 518  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  4162046 agctggctcccgatctcgaatcaaaagtgatcggcccacca 4162086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 511
Target Start/End: Complemental strand, 7696207 - 7695985
Alignment:
Q  289 caaccacccatcgccactactcacccccatagaa---caccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcct 385  Q
    ||||||| ||||| |||||||||| ||| |||||   ||||||| |||||||||||||  | | | |||||| ||  ||||||||||    ||| |||||    
T  7696207 caaccactcatcgtcactactcactcccttagaaaaacacccctaaaaataaaactcctggtcctgaacaccaaagttgagccacatcctcaaatctcct 7696108  T
Q  386 aaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaac--aaaaggctaaaaaccaacttcagcaaaagagctga 483  Q
    | ||||| || ||  |||||||||| ||||| |||||  ||||||||||||||     ||| |  ||||| | |||| | ||||| ||| ||||| ||||    
T  7696107 atccgaaagatcattcagcttccaccacctcccgaccttcgatccaccgaaag-----aaaccgtaaaagcccaaaacctaacttgagccaaagaactga 7696013  T
Q  484 ctcccgatctcgaatcaaaagtgatcgg 511  Q
    |||||| | |||||||||||||||||||    
T  7696012 ctcccggtatcgaatcaaaagtgatcgg 7695985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 424 - 668
Target Start/End: Complemental strand, 17079277 - 17079033
Alignment:
Q  424 ccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactt 523  Q
    |||||||||||||||| ||| ||| ||| | | |||| | ||||| ||| ||||| ||| ||||||||||||||||||||  |||||||  | ||  |||    
T  17079277 ccgatccaccgaaagaacaccaaa-aaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggcttagcagtctt 17079179  T
Q  524 tagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aacaacatatcaagtcaaacataattccaactagacatcaactctcgatctcga 622  Q
    ||| | ||| |||| |||| ||||| |  ||||||| ||| |||| ||||  |||||||  | ||||  ||| |||||| |||  |||||||||||||||    
T  17079178 taggaacaattcagaagggaacccc-taaccccggtccactagagaaacacgatatcaaacccaacaagattgcaactacacacaaactctcgatctcga 17079080  T
Q  623 agcaaaa-taaccggctcactggaaaccagcacacaatatgtaagac 668  Q
    || |||| ||||| |  ||  | ||||||||||||||||||||||||    
T  17079079 agtaaaagtaaccagtccatcgaaaaccagcacacaatatgtaagac 17079033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 480 - 570
Target Start/End: Complemental strand, 27740028 - 27739938
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||||| |||||| |||||||||| ||||||||||||| |||| || |||||  |||  ||||||||||  ||||| || ||||||||||    
T  27740028 ctgactctcgatcttgaatcaaaagcgatcggcccaccagacttcaggaccaatccagatgggcacccctaacccccagtccaccagagaa 27739938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 474 - 523
Target Start/End: Original strand, 33788654 - 33788703
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactt 523  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||||| ||||    
T  33788654 aaagaactgactcccaatctcgaatcaaaagcgatcggcccaccagactt 33788703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 539
Target Start/End: Original strand, 36276200 - 36276258
Alignment:
Q  481 tgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagca 539  Q
    |||||||||||||||||||||||| || | |||||||| |||  | |||||||||||||    
T  36276200 tgactcccgatctcgaatcaaaagcgaacagcccaccagactccataaccaaatcagca 36276258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 376 - 438
Target Start/End: Original strand, 41086723 - 41086785
Alignment:
Q  376 aaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaag 438  Q
    |||||||| || ||||| || ||  |||||||||| ||||||||||| |||||||||||||||    
T  41086723 aaaagctcttatccgaaagatcattcagcttccaccacctctcgacctccgatccaccgaaag 41086785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 516
Target Start/End: Original strand, 23665439 - 23665468
Alignment:
Q  487 ccgatctcgaatcaaaagtgatcggcccac 516  Q
    ||||||||||||||||||||||||||||||    
T  23665439 ccgatctcgaatcaaaagtgatcggcccac 23665468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 474 - 550
Target Start/End: Original strand, 25504931 - 25505007
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccctt 550  Q
    ||||| ||||||||||||||||||| ||||| ||| || |||||| |||  |  |||||||||  ||||||||||||    
T  25504931 aaagaactgactcccgatctcgaattaaaagcgataggtccaccagactgcaagaccaaatcataagggcacccctt 25505007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 240; Significance: 1e-132; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 282 - 695
Target Start/End: Complemental strand, 34390213 - 34389799
Alignment:
Q  282 gtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagc 381  Q
    |||||| ||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||  |||||||||||| ||||||    
T  34390213 gtatccgcaaccacccatcgtcactactcatccccaaagaacacccctcaaaataaaactcccagactacaacacccaagttgagccacatttgaaaagc 34390114  T
Q  382 tcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagct 481  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| | |||||||||||| ||| ||||||||    
T  34390113 tcctaatcgaatgaacatgcagcttccacaacctctcgacctccgatccaccgaaagagcacaaaataaaagcccaaaaaccaacttaagccaaagagct 34390014  T
Q  482 gactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaacatatcaa 581  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||  ||||| ||||||||||||||| ||||||||    
T  34390013 gactcccgatctcgaatcaaaagtgatcggcccaccagactttaaaaccaaatcagcagggcactcctcacccccagtacaccagagaacaccatatcaa 34389914  T
Q  582 gtc-aaacataattccaactagacatcaactctcgatctcgaagc-aaaataaccggctcactggaaaccagcacacaatatgtaagacgataaacaatg 679  Q
    ||| |||||| ||| |||||||||| |||||   ||||||||||| |||||||| ||| ||   || |||||||||||||||||| ||||||| || |||    
T  34389913 gtcaaaacatgattgcaactagacaccaacttctgatctcgaagcaaaaataactggcccatcagacaccagcacacaatatgtacgacgatagac-atg 34389815  T
Q  680 atatgcgattggtgca 695  Q
    ||||||||||||||||    
T  34389814 atatgcgattggtgca 34389799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 203 - 629
Target Start/End: Original strand, 35745574 - 35746004
Alignment:
Q  203 aagcctctgaagataacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgc 302  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||| |||  |||||||   ||||||  ||||||||||     
T  35745574 aagcccctgaagataacccaccaaaacacatcaccacctaagacagacaccttaacagaaacaaa-cacactaaacacaacatccacccccacccatcgt 35745672  T
Q  303 cactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccac---atttc-aaaagctcctaaccgaatgaaca 398  Q
    ||||||||||||||| |||||||| || ||||||||||   ||||||||||||||||| |||||||||   || || |||||||||||||||||||||||    
T  35745673 cactactcacccccaaagaacacctctcaaaataaaacagtcagacttcaacacccaagctgagccactatatatcgaaaagctcctaaccgaatgaaca 35745772  T
Q  399 agcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaa-caaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaa 497  Q
     ||||||||||||||||||| ||| || ||||||||||||||||||||| |||||| | |||||||||||| ||| |||||| ||||| |||||||||||    
T  35745773 tgcagcttccacaacctctccacctccaatccaccgaaagagcacaaaaacaaaagcccaaaaaccaacttgagccaaagagatgacttccgatctcgaa 35745872  T
Q  498 tcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaacatatcaagtcaaacataattcca 597  Q
    |||||||||||| ||||| || |||||||||| |||| || ||||||||||| |||||||||||| ||||||||| ||||||||||||||||  ||| |     
T  35745873 tcaaaagtgatcagcccatcagactttagaacaaaattagtagggcacccctcgcccccggtacatcagagaacaccatatcaagtcaaacaagattgct 35745972  T
Q  598 actagacatcaactctcgatctcgaagcaaaa 629  Q
     |||| || |||||  ||||||||||||||||    
T  35745973 gctagtcaccaacttccgatctcgaagcaaaa 35746004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 270 - 670
Target Start/End: Complemental strand, 3867379 - 3866977
Alignment:
Q  270 actgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcca 369  Q
    |||||||||||| ||||||| |||  |||||| ||||||||||||||| ||||||||| | ||||||||||| ||| ||| |||||||||| ||||||||    
T  3867379 actgtaaacacgatatccaccaccgtccatcgtcactactcacccccaaagaacaccc-tcaaaataaaacttccatactccaacacccaagctgagcca 3867281  T
Q  370 catttcaaa-agctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaactt 468  Q
    ||| || || ||| ||| ||| || || || |||| ||||| |||||| ||||| | ||||||||| ||||||||||| |||||| | ||||||||||||    
T  3867280 catatcgaagagcacctgaccaaaggatcatgcagtttccataacctcgcgacctctgatccaccgcaagagcacaaagcaaaagcccaaaaaccaactt 3867181  T
Q  469 cagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag 568  Q
     ||  ||||| |||||||||| ||||||||||||||||||| |||||||| | ||||| ||||||| |||||| ||||| | |||| |||||||||||||    
T  3867180 gagtcaaagaactgactcccggtctcgaatcaaaagtgatcagcccaccatattttagtaccaaattagcaggccacccttcgccctcggtacaccagag 3867081  T
Q  569 aacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaa 665  Q
    || || |||||||||||||||| | |||  | ||||||  | ||||||||||||||||||||| ||| || | |||  |||||||| |||||||||||||    
T  3867080 aaaaaccatatcaagtcaaacaaagattgtagctagaccccgactctcgatctcgaagcaaaagtaatcgacccac-cgaaaccaggacacaatatgtaa 3866982  T
Q  666 gacga 670  Q
    |||||    
T  3866981 gacga 3866977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 277 - 667
Target Start/End: Complemental strand, 38306517 - 38306124
Alignment:
Q  277 acacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttca 376  Q
    ||||| ||||||| ||||||||||| |||||||||||  || ||||||||| | |||||||||||| |||||  |||||||||| ||||||||||| ||     
T  38306517 acacgatatccaccaccacccatcgtcactactcacctacaaagaacaccc-tcaaaataaaactcacagaccccaacacccaagctgagccacatatcg 38306419  T
Q  377 aa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaa 474  Q
    || ||| | |||||||| || || ||||||  ||||| |||| ||||| |||| ||| ||||||||||||| ||||| | | |||||||||||| ||  |    
T  38306418 aagagcacttaaccgaaggatcatgcagctatcacaaacctcgcgacctccgaaccatcgaaagagcacaacacaaa-gcccaaaaaccaacttgagtca 38306320  T
Q  475 aagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaa- 573  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||| |||||| ||||||||||||| ||     
T  38306319 aagaactgactcccaatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcgccccctgtacaccagagaaaaac 38306220  T
Q  574 catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgtaaga 667  Q
    || ||||||||||||| | ||| || ||||||  | |||| || ||||||||| |||| ||||||| ||| | |||||||||||||||||||||||    
T  38306219 caaatcaagtcaaacaaagattgcagctagaccccgactcccgttctcgaagccaaatgaaccggcccaccgaaaaccagcacacaatatgtaaga 38306124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 269 - 667
Target Start/End: Original strand, 47325702 - 47326103
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    |||||||||||| |||||||  | | ||||||| |||||||||||| || ||||||||| | ||||||||||||||||||  |||||||||| |||||||    
T  47325702 cactgtaaacacagtatccatcatcgcccatcgtcactactcacccacaaagaacaccc-tcaaaataaaactcccagaccccaacacccaagctgagcc 47325800  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||||| || ||| |||||||||| || ||  |||||  ||||| |||| ||||| |||||||| ||||||||||||  ||||| | | ||||||||||    
T  47325801 acatttcgaagagcacctaaccgaaggatcattcagctatcacaaacctcgcgacctccgatccatcgaaagagcacagcacaaa-gcccaaaaaccaac 47325899  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    || ||  ||||||||||||||||||||| ||||||||| ||||||||||||| ||| ||| ||||||| |||| ||||||||| ||||||||||||||||    
T  47325900 ttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggcccaccagactatagtaccaaattagcaaggcacccctcgcccccggtacaccag 47325999  T
Q  567 agaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgt 663  Q
    |||| || || ||||||| ||||| | ||| |  ||||||  | |||| |||||||||||| |||| ||||||| ||  | |||||||||||||||||||    
T  47326000 agaaaaaccaaatcaagttaaacaaagattgctgctagaccccgactcccgatctcgaagccaaatgaaccggcccatcgaaaaccagcacacaatatgt 47326099  T
Q  664 aaga 667  Q
    ||||    
T  47326100 aaga 47326103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 305 - 670
Target Start/End: Complemental strand, 33435337 - 33434970
Alignment:
Q  305 ctactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaa-agctcctaaccgaatgaacaagcag 403  Q
    ||||||||||||| ||||||||| | |||| ||||||| ||||| |||||| |||| |||||||||| ||| || ||| ||| |||||| || || | ||    
T  33435337 ctactcacccccaaagaacaccc-tcaaaagaaaactctcagacctcaacaaccaagctgagccacaattcgaagagcacctgaccgaaggatcatgtag 33435239  T
Q  404 cttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaa 503  Q
    ||| ||||||||| ||||| |||||||||||||||||||||||||||| | | | |||| ||||| ||  ||||| ||||||||||||||||||||||||    
T  33435238 ctttcacaacctcgcgacctccgatccaccgaaagagcacaaaacaaatgcccacaaacgaacttgagacaaagaactgactcccgatctcgaatcaaaa 33435139  T
Q  504 gtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaacatatcaagtcaaacata-attccaactag 602  Q
    ||||||| | ||||| ||||||| ||||||| | |||||||||||| |||||||||||||||||||| | || ||||||  ||||| | ||| |||||||    
T  33435138 gtgatcgtctcaccagactttagtaccaaattaacagggcacccctcgcccccggtacaccagagaaaaccaaatcaagctaaacaaagattacaactag 33435039  T
Q  603 acatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaagacga 670  Q
    ||    |||  |||||||||||||||| ||| |||| ||| |||||||| |||||||||||||| ||||    
T  33435038 acccggactaccgatctcgaagcaaaagtaatcggcccaccggaaaccaacacacaatatgtaatacga 33434970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 272 - 670
Target Start/End: Original strand, 3419475 - 3419877
Alignment:
Q  272 tgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccaca 371  Q
    |||||||| | ||||||| |||   ||||| |||||||||| | || ||||||||| ||||||||||||||||| ||  ||||||||||  | |||||||    
T  3419475 tgtaaacatgatatccaccaccgttcatcgtcactactcactcacaaagaacaccc-ttaaaataaaactcccaaaccccaacacccaagttaagccaca 3419573  T
Q  372 tttcaaaa-gctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttc 469  Q
     ||| ||  || |||||||||| || |||||||||  ||||| |||   |||| | ||||||||||||||||||| ||  |||| | ||||||||||||     
T  3419574 attcgaagcgcacctaaccgaaggatcaagcagctatcacaaaccttgtgacctctgatccaccgaaagagcacagaaacaaagcccaaaaaccaacttg 3419673  T
Q  470 agcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagaga 569  Q
    ||  |||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||| | |||||||||||| |||||||||| ||||||||    
T  3419674 agtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccacactttagtaccaaattaacagggcacccctcgcccccggtataccagaga 3419773  T
Q  570 acaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgtaag 666  Q
    | || || ||||||||||||| | ||| || ||||||  | |||| |||||||||||| |||| ||||||||| | | ||||||||||||||||||||||    
T  3419774 aaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggctcgccgaaaaccagcacacaatatgtaag 3419873  T
Q  667 acga 670  Q
    ||||    
T  3419874 acga 3419877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 400 - 565
Target Start/End: Complemental strand, 6585042 - 6584877
Alignment:
Q  400 gcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatc 499  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||||    
T  6585042 gcaggttccacaacctctcaacctccgatccaccgaaagagcacaaaacaaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatc 6584943  T
Q  500 aaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacacca 565  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||    
T  6584942 aaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcgcctccggtacacca 6584877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 272 - 589
Target Start/End: Original strand, 41089569 - 41089886
Alignment:
Q  272 tgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccaca 371  Q
    ||||||||| ||||| || ||| ||||| | ||||| | |||| || ||||||||| | ||||||||||||||||||   ||||||||   ||||| |||    
T  41089569 tgtaaacacagtatctaccaccgcccattgtcactatt-acccgcaaagaacaccc-tcaaaataaaactcccagaccctaacacccatcttgagctaca 41089666  T
Q  372 tttcaaa-agctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttca 470  Q
     ||| || ||| ||| | ||||  | || ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||   |||||||||||| |    
T  41089667 cttcgaagagcacctcaacgaagaatcatgcagcttccacaacctcgcgacctccgatccaccgaaagatcacaaaacaaaagctcaaaaaccaacttga 41089766  T
Q  471 gcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    |  ||||||||||||||| |||||||||||||||||||||| |||||| ||||||| ||||||| ||||| |||||||| ||||||| ||||||||||||    
T  41089767 gtcaaagagctgactcccaatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagagcacccctcgcccccgatacaccagagaa 41089866  T
Q  571 caa-catatcaagtcaaaca 589  Q
     || || |||||||||||||    
T  41089867 aaaccaaatcaagtcaaaca 41089886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 273 - 670
Target Start/End: Complemental strand, 10244442 - 10244043
Alignment:
Q  273 gtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacat 372  Q
    ||||||| ||||||||| | | ||||||| |||||||||||| || ||| ||||| |  || ||||| ||||||||   ||||||||| ||||||||||     
T  10244442 gtaaacatggtatccaccatcgcccatcgtcactactcacccacaaagaccaccc-tccaactaaaaatcccagacccaaacacccaagctgagccacaa 10244344  T
Q  373 ttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttca 470  Q
    |||||| ||| |||||||||| || || ||| ||  ||||| |||| ||||| |||| |||| |||||||||||| ||||| ||| |||||| ||||| |    
T  10244343 ttcaaagagcacctaaccgaaggatcatgcaactatcacaaacctcgcgacctccgaaccactgaaagagcacaacacaaa-ggccaaaaactaacttga 10244245  T
Q  471 gcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    |  ||||| ||||||||||||||||||||||||||||||||||||||| | | ||| ||||||| ||||||||||||||  |||||||||||||||||||    
T  10244244 gtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagattatagcaccaaattagcagggcacccctctcccccggtacaccagagaa 10244145  T
Q  571 caa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgtaaga 667  Q
     || || ||| | ||||||| | ||| ||||||||   | |||| |||||||||||| |||| |||| ||  || | |||||||||||||||||||||||    
T  10244144 aaaccaaatcta-tcaaacaaagattgcaactagatcccgactcccgatctcgaagccaaatgaaccagccaaccgaaaaccagcacacaatatgtaaga 10244046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 269 - 665
Target Start/End: Complemental strand, 37795253 - 37794865
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||||||||||||||| ||| ||||||   |||||| | || || ||||||||| | |||||||||||| || ||  |||||||||| |||||||    
T  37795253 cactgtaaacacggtatccaccaccgcccatcattactacttaaccacaaagaacaccc-tcaaaataaaactctcaaaccccaacacccaagctgagcc 37795155  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||| ||| || ||| |||||||||| || || ||||||  ||||| |||| ||||| |||| ||||||||||||||||| ||||| | | ||||||||||    
T  37795154 acagttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctccgaaccaccgaaagagcacaacacaaa-gcccaaaaaccaac 37795056  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    || |   ||||| |||||||||||||||||||||||| ||| |||||||||| ||| ||  ||||||| |||||||||||||| |||||||||||||       
T  37795055 ttgactcaaagaactgactcccgatctcgaatcaaaactgaacggcccaccatactatattaccaaattagcagggcacccctcgcccccggtacac--- 37794959  T
Q  567 agaacaacatatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgta 664  Q
           || ||||||||||||| | ||| || ||||||  |||||| |||||||||||| |||| ||||||| ||| | ||||||||||||||||||||    
T  37794958 -------caaatcaagtcaaacaaagattgcagctagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaaccagcacacaatatgta 37794866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 295 - 670
Target Start/End: Original strand, 5860131 - 5860509
Alignment:
Q  295 cccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaa-agctcctaaccgaat 393  Q
    ||||||| ||||||||| || || ||||||||| | ||||||||||||||||||  |||||||||| |||||||||||||| || ||| |||||| |||     
T  5860131 cccatcgtcactactcatccacaaagaacaccc-tgaaaataaaactcccagaccccaacacccaagctgagccacatttcgaagagcacctaactgaag 5860229  T
Q  394 gaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatc 492  Q
    || || ||||||  ||||| |||| ||||| |||| ||||||||||||||||| ||||| | | ||||||||||||  |  |||||  ||||||||||||    
T  5860230 gatcatgcagctatcacaaacctcgcgacctccgaaccaccgaaagagcacaacacaaa-gcccaaaaaccaacttgcgtcaaagaattgactcccgatc 5860328  T
Q  493 tcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaa-catatcaagtcaaacata 591  Q
    |||||||||||| ||| ||||||||  ||| ||| ||||||| |||||||||||||| ||||||||||||  |||||| || || ||  || |||||| |    
T  5860329 tcgaatcaaaagcgataggcccaccggactatagtaccaaattagcagggcacccctcgcccccggtacagtagagaaaaaccaaattcagccaaacaaa 5860428  T
Q  592 -attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgtaagacga 670  Q
     ||| ||  ||||| || |||| |||||||||||| |||| ||||||| ||  | ||||||||||||||||||||||||||    
T  5860429 gattgcagatagacctcgactcccgatctcgaagccaaatgaaccggcccatcgaaaaccagcacacaatatgtaagacga 5860509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 303 - 658
Target Start/End: Complemental strand, 8745384 - 8745026
Alignment:
Q  303 cactactcacccccatagaa---caccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaa 399  Q
    ||||||||||||||| ||||   ||||||| ||||| |||||||||| ||| |||||| || |||||||||||   ||||||||||| | ||| || ||     
T  8745384 cactactcacccccaaagaaaaacacccctcaaaattaaactcccagtcttgaacaccaaagctgagccacatccgaaaagctcctatctgaaagatcat 8745285  T
Q  400 gcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatc 499  Q
    ||||||||||||||||||||||| ||||||||||||||||   || |  ||||| | |||| | ||||| | | || || |||| |||||||||||||||    
T  8745284 gcagcttccacaacctctcgacctccgatccaccgaaagaaaccata--aaaagcccaaaaccaaacttgatccaacgaactgaatcccgatctcgaatc 8745187  T
Q  500 aaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aacaacatatcaagtcaaacataattccaa 598  Q
    ||||||||||||||||||| | ||||| |||||||||| ||| |||||||  ||| |||| |||||||| |||| || ||||   ||||||  ||| ||     
T  8745186 aaaagtgatcggcccaccagaatttaggaccaaatcagaaggccacccctcaccctcggtgcaccagagaaacaccagatcacaccaaacaacattgcag 8745087  T
Q  599 ctagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaa 658  Q
    ||||||| |  ||  |||||||||||||||| |||||||| ||| | ||||||||||||||    
T  8745086 ctagacaccgccttccgatctcgaagcaaaagtaaccggcccaccgaaaaccagcacacaa 8745026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 239 - 372
Target Start/End: Complemental strand, 6585176 - 6585043
Alignment:
Q  239 cctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaa 338  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||| ||||||||||| ||| | | ||||||| ||||||||    
T  6585176 cctaagacggacaccttaacagaaacaaaacactgaaaacacagtatccacaaccactcatcgtcactactcacctccaaatagcacccctcaaaataaa 6585077  T
Q  339 actcccagacttcaacacccaaactgagccacat 372  Q
    |||||||||||||||||||||| |||||||||||    
T  6585076 actcccagacttcaacacccaagctgagccacat 6585043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 269 - 511
Target Start/End: Original strand, 44353380 - 44353623
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||||||||||||||| |||  |||||| |||||||||||  || |||||||||   ||||||||||||||||||  |||||||||| | | | |    
T  44353380 cactgtaaacacggtatccaccaccgtccatcgtcactactcacctacaaagaacaccctcaaaaataaaactcccagaccccaacacccaagccgggtc 44353479  T
Q  369 acatttc-aaaagctcctaaccgaatgaacaagcagcttccac-aacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||||| || ||| |||||||||| || || ||||||  ||| |||||| ||||| |||||||||||||||||||||| || |||| | ||||||||||    
T  44353480 acatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctccgatccaccgaaagagcacaacac-aaagcccaaaaaccaac 44353578  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcgg 511  Q
     | ||  ||||| ||||||||||||||| ||||||||||||||||    
T  44353579 ataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 44353623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 240 - 509
Target Start/End: Original strand, 48161817 - 48162083
Alignment:
Q  240 ctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactactcacccccata-gaacaccccttaaaataaa 338  Q
    ||||||| |||||||||| ||||||||| ||||  ||| || ||  ||||||||||| |||| ||| | ||||||||| | ||||||| || | ||||||    
T  48161817 ctaagacagacaccttaatagaaacaaa-cactagaaatacagt--ccacaaccacctatcgtcacaattcacccccaaacgaacacctctcagaataaa 48161913  T
Q  339 actcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaag 438  Q
    |||| ||||||||||| || |  | ||||||||||  |||||||| ||||| |||||||||||| ||||||||||||||||||| | |||||||| ||||    
T  48161914 actctcagacttcaacgccaagtc-gagccacattcgaaaagctc-taacccaatgaacaagcaacttccacaacctctcgacctctgatccaccaaaag 48162011  T
Q  439 agcac-aaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatc 509  Q
    ||||| |||||||||| | ||||| ||| || ||| ||||| |||| | ||||||||||||||||| |||||    
T  48162012 agcacaaaaacaaaagtccaaaaatcaatttgagccaaagaactgatttccgatctcgaatcaaaaatgatc 48162083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 296 - 570
Target Start/End: Original strand, 24324640 - 24324916
Alignment:
Q  296 ccatcgccactactcacccccatagaa---caccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaa 392  Q
    |||||| ||||||||||||| | ||||   ||||||| |||||||||||| | | | | |||||| || ||||||||||    |||||||||||||||||    
T  24324640 ccatcgtcactactcacccctaaagaaaaacacccctcaaaataaaactctccgtcctgaacaccaaagctgagccacagccgaaaagctcctaaccgaa 24324739  T
Q  393 tgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaa-cttcagcaaaagagctgactcccgat 491  Q
     || ||  |||||||||| ||| ||||||| |||||||||| |||||   || ||  |||| | |||| | || ||| ||| |||||  |||||||||||    
T  24324740 agatcattcagcttccaccacccctcgacctccgatccacctaaagaaaccataa--aaagcccaaaaccaaaacttgagccaaagaattgactcccgat 24324837  T
Q  492 ctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    |||||||||||| |||||||||||||||||||||  |||||||||| |||||||||||   ||||||||||||| ||||    
T  24324838 ctcgaatcaaaattgatcggcccaccaaactttaagaccaaatcagaagggcacccctaaaccccggtacaccaaagaa 24324916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 268 - 549
Target Start/End: Complemental strand, 3478614 - 3478336
Alignment:
Q  268 acactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagc 367  Q
    ||||||||||  || ||||||  |||| || ||| ||||||||||||| | ||||||| ||| ||||| |||||||||| | |||||||| || || |||    
T  3478614 acactgtaaaagcgatatccatcaccaaccgtcgtcactactcaccccaa-agaacactcctcaaaattaaactcccagtcctcaacaccaaagcttagc 3478516  T
Q  368 cacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaa-c 466  Q
    ||  |   ||||| ||  | ||||| || ||  |||||||| | ||||||||| | |||||||||||||||| ||| || ||||  ||  ||||| || |    
T  3478515 caactcagaaaagttcacatccgaaagatcattcagcttccgccacctctcgatctccgatccaccgaaagaacaccaa-caaa--gcccaaaactaatc 3478419  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccct 549  Q
    || ||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||    
T  3478418 ttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccaaactttaggaccaaaacagaagggcacccct 3478336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 272 - 570
Target Start/End: Complemental strand, 25161072 - 25160778
Alignment:
Q  272 tgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccaca 371  Q
    ||||||||  |||||||| | | ||||||| |||||||||||| || ||||||||  ||||||  |||||| |||||  ||||| | ||  |||||||||    
T  25161072 tgtaaacatagtatccaccaacgcccatcgtcactactcacccacaaagaacacct-ttaaaa--aaactctcagaccccaacatctaagttgagccaca 25160976  T
Q  372 tttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttc 469  Q
    |||| || ||| |||||| ||| || ||  |||||  ||||| |||   |||| || ||||||||||||||||||| |||   | | ||||||||||||     
T  25160975 tttccaagagcacctaactgaaggatcacacagctatcacaaaccttgagacctccaatccaccgaaagagcacaacaca---gcccaaaaaccaactta 25160879  T
Q  470 agcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagaga 569  Q
    |    ||||  ||||| ||||||||||||||||||| ||||| |||||| ||| ||||||||||| |||||||||||||| |||| ||||||||||||||    
T  25160878 atttcaagatttgacttccgatctcgaatcaaaagtaatcggtccaccagactatagaaccaaattagcagggcacccctcgccctcggtacaccagaga 25160779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 480 - 570
Target Start/End: Complemental strand, 38485609 - 38485519
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| || |||| |||||||||||| ||||| || ||||||||||    
T  38485609 ctgactcccgatctcgaatcaaaagtgatcggcccaccagacttcagaacaaattcagaagggcaccccttacccccagtccaccagagaa 38485519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 42533281 - 42533370
Alignment:
Q  481 tgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||  |||||| | ||||||||||    
T  42533281 tgactcccgatctcgaatcaaaagtgatcagcccaccagactttaggaccaaatcaggagggcacccctcacccccgatgcaccagagaa 42533370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 464 - 655
Target Start/End: Complemental strand, 1320863 - 1320671
Alignment:
Q  464 aacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacac 563  Q
    ||||| ||| ||||| |||||| ||||| | |||||||||||||||||||||||| ||||||  |||||||||  |||||||||||  |||||| ||||     
T  1320863 aacttgagccaaagaactgacttccgattttgaatcaaaagtgatcggcccaccagactttatgaccaaatcaaaagggcacccctcacccccgatacat 1320764  T
Q  564 cagag-aacaacatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaataaccggctcactggaaaccagcaca 655  Q
    ||||| |||| || ||   | |||||| |||| || ||||||| |||||| |||||||||||||||| || |||  ||| |||||||| ||||    
T  1320763 cagagaaacaccaaattgcgccaaacaaaattacagctagacaccaactcccgatctcgaagcaaaaaaatcggtccaccggaaaccaacaca 1320671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 269 - 392
Target Start/End: Original strand, 31971951 - 31972074
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    |||||||||||||||||| || ||| ||||||| |||||||||||| || |||||| ||||  |||||||||||||||||  |||||||||| |||||||    
T  31971951 cactgtaaacacggtatcaaccaccgcccatcgtcactactcacccacaaagaaca-ccctccaaataaaactcccagaccccaacacccaagctgagcc 31972049  T
Q  369 acatttc-aaaagctcctaaccgaa 392  Q
    ||||||| || ||| ||||||||||    
T  31972050 acatttcgaagagcacctaaccgaa 31972074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 464 - 668
Target Start/End: Original strand, 6716748 - 6716954
Alignment:
Q  464 aacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacac 563  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||  |  ||||||| |||||||||||  | | ||||||||    
T  6716748 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggccaaccagactttatgattaaatcagaagggcacccctcactctcggtacac 6716847  T
Q  564 cagag-aacaacatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatat 661  Q
    ||||| |||| || |||||| |||| |  ||| || ||||||| | |||| ||||||| ||| |||| |||| ||| ||| | |||||||||| ||| |     
T  6716848 cagagaaacatcaaatcaagccaaataagattgcagctagacaccgactcccgatctcaaagtaaaagtaactggcccaccgaaaaccagcacgcaaaaa 6716947  T
Q  662 gtaagac 668  Q
    |||||||    
T  6716948 gtaagac 6716954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 474 - 570
Target Start/End: Complemental strand, 13311898 - 13311802
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||  |  |||||| |||  |||||||||||  ||||||| ||||||||||    
T  13311898 aaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactacatgaccaaaccagacgggcaccccttatccccggtccaccagagaa 13311802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 34391511 - 34391427
Alignment:
Q  202 aaagcctctgaagataa-cccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtat 285  Q
    |||||| |||||||||| ||||||||| ||||||| ||||||||||| ||||||||| |||||||||||||| ||||||| ||||    
T  34391511 aaagcccctgaagataaacccaccaaaacacatcaccacctaagacgaacaccttaatagaaacaaaacactctaaacacagtat 34391427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 496 - 630
Target Start/End: Complemental strand, 44755663 - 44755529
Alignment:
Q  496 aatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aacaacatatcaagtcaaacataatt 594  Q
    ||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |  || ||||||||||||| |||| || |||| |||||||| |||     
T  44755663 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc-tcaccacggtacaccagagaaacaccaaatcacgtcaaacaaaata 44755565  T
Q  595 ccaactagacatcaactctcgatctcgaagcaaaat 630  Q
     || ||||||| | |||| ||| ||| |||||||||    
T  44755564 gcagctagacaccgactcccgacctcaaagcaaaat 44755529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 474 - 657
Target Start/End: Complemental strand, 16954712 - 16954527
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aaca 572  Q
    ||||| ||||||  |||||||||| ||||||||||||| | |||| ||||||| |||||||||| |||||||||||  || | | |||||||||| || |    
T  16954712 aaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaatcagaagggcacccctcacctctgatacaccagagaaaga 16954613  T
Q  573 acatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacaca 657  Q
     || |||  | ||| ||  ||| || ||||||| ||||||||||||| ||||||||| ||| |||| ||  |||||||||||||||    
T  16954612 ccaaatcgcgccaaccaagattgcagctagacaccaactctcgatctggaagcaaaagtaatcggcccatcggaaaccagcacaca 16954527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 474 - 546
Target Start/End: Complemental strand, 12480945 - 12480873
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacc 546  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||| || || ||||||| ||| ||||    
T  12480945 aaagaactgactcccgatctcgaatcaaaagcgatcggcccaccaaacttcaggacaaaatcagaaggccacc 12480873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 480 - 570
Target Start/End: Original strand, 46133306 - 46133396
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||||||||||||| ||||||||| ||||||| ||||| |||| || |||||||||| ||||||| |||  || ||||| ||||||||||    
T  46133306 ctgactcccgatctcaaatcaaaagcgatcggctcaccagacttcagcaccaaatcagaagggcactcctaacctccggtccaccagagaa 46133396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 481 - 525
Target Start/End: Complemental strand, 9349801 - 9349757
Alignment:
Q  481 tgactcccgatctcgaatcaaaagtgatcggcccaccaaacttta 525  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  9349801 tgactcccgatctcgaatcaaaagtgatcggcccaccagacttta 9349757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 474 - 570
Target Start/End: Original strand, 16828958 - 16829054
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||| ||||||  |||||||||| ||||||||||| ||| |||| ||||||| |||||||||| |||||||||||  |||| | ||||| ||||||    
T  16828958 aaagaactgactttcgatctcgaaacaaaagtgatcagccaaccagactttaggaccaaatcagaagggcacccctcacccctgatacactagagaa 16829054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 570
Target Start/End: Original strand, 47457034 - 47457140
Alignment:
Q  464 aacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacac 563  Q
    ||||| ||| ||||| ||||||||| ||||| ||||||||| |||||| ||| || |||| || ||| ||||||  ||||||||||| |||||| | |||    
T  47457034 aacttgagccaaagaactgactcccaatctcaaatcaaaagcgatcggtccatcagacttcaggacctaatcagacgggcaccccttacccccgatccac 47457133  T
Q  564 cagagaa 570  Q
    |||||||    
T  47457134 cagagaa 47457140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 480 - 570
Target Start/End: Original strand, 11379155 - 11379245
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||  |  ||||||| || ||||||||||   ||| |||| ||||||||||    
T  11379155 ctgactcccgatctcgaatcaaaagcgatcggctcaccagactacatgaccaaattagaagggcaccccaaaccctcggtccaccagagaa 11379245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 518
Target Start/End: Original strand, 46262151 - 46262185
Alignment:
Q  484 ctcccgatctcgaatcaaaagtgatcggcccacca 518  Q
    |||||||||||||||||||||||||||||||||||    
T  46262151 ctcccgatctcgaatcaaaagtgatcggcccacca 46262185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 518
Target Start/End: Original strand, 17802842 - 17802882
Alignment:
Q  478 agctgactcccgatctcgaatcaaaagtgatcggcccacca 518  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  17802842 agctggcttccgatctcgaatcaaaagtgatcggcccacca 17802882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 518
Target Start/End: Original strand, 27993568 - 27993602
Alignment:
Q  484 ctcccgatctcgaatcaaaagtgatcggcccacca 518  Q
    |||||||||||||||||||||||||||| ||||||    
T  27993568 ctcccgatctcgaatcaaaagtgatcggtccacca 27993602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 518
Target Start/End: Original strand, 35206725 - 35206759
Alignment:
Q  484 ctcccgatctcgaatcaaaagtgatcggcccacca 518  Q
    |||||||||||| ||||||||||||||||||||||    
T  35206725 ctcccgatctcggatcaaaagtgatcggcccacca 35206759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 6716554 - 6716658
Alignment:
Q  269 cactgtaaacacggtatc-cacaaccacccatcgccactactcacccccatagaa-caccccttaaaataaaactcccagacttcaacacccaaactgag 366  Q
    ||||||||| |||||||| |||| |||||||| | |||||||||||||||  ||| ||||||  ||||| |||||||||  | |||||||| || |||||    
T  6716554 cactgtaaaaacggtatctcaca-ccacccattgtcactactcacccccaacgaaacaccccacaaaattaaactcccattcctcaacaccaaagctgag 6716652  T
Q  367 ccacat 372  Q
    ||||||    
T  6716653 ccacat 6716658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 233; Significance: 1e-128; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 220 - 695
Target Start/End: Original strand, 15821147 - 15821622
Alignment:
Q  220 ccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactactcacccccata 319  Q
    |||||||| ||||||| |||||||||| |||||||||||||||||||||||  ||||||||   |||||||||||| |||||||||||||||| || | |    
T  15821147 ccaccaaaacacatcaccacctaagacagacaccttaacagaaacaaaacaaggtaaacacaaaatccacaaccactcatcgccactactcactccaaaa 15821246  T
Q  320 gaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcg 419  Q
    |||||| ||| ||||||||||||||||||||||||| || | ||||||||||||  |||||||||||||| ||||||||||  | |||||||||||||||    
T  15821247 gaacactcctcaaaataaaactcccagacttcaacatccgagctgagccacattcgaaaagctcctaaccaaatgaacaagttgtttccacaacctctcg 15821346  T
Q  420 accaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaa 519  Q
    ||| | ||||||| |||||||||||||||||||| | |||||||||| | ||  |||||||||||||||||||||||||||||||||||| ||||||||     
T  15821347 acctctgatccactgaaagagcacaaaacaaaagcccaaaaaccaacataagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccag 15821446  T
Q  520 actttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaacatatcaagtcaaacataattccaactagacatcaactctcgatct 619  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||  |||  | |||| || |||||  ||||||    
T  15821447 actttagaaccaaatcagcagggcacccctcgccctcggtacaccagagaacaccatatcaagccaaacaggattgtagctaggcaccaacttccgatct 15821546  T
Q  620 cgaag-caaaataaccggctcactggaaaccagcacacaatatgtaagacgataaacaatgatatgcgattggtgca 695  Q
    | |||  ||||||| |||| |||  || |||| ||||||||||||||||||||| || |||||||| ||||||||||    
T  15821547 caaagaaaaaataatcggcccaccagataccaacacacaatatgtaagacgatagac-atgatatgtgattggtgca 15821622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 217 - 502
Target Start/End: Original strand, 38577554 - 38577840
Alignment:
Q  217 aacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactactcaccccc 316  Q
    ||||||||||| ||||||| |||||||||||||||||| || | |||||||||||||||||||| |||||||||| || |||||| ||||||||| ||||    
T  38577554 aacccaccaaaacacatcaccacctaagacggacacctaaatataaacaaaacactgtaaacacagtatccacaatcatccatcgtcactactcatcccc 38577653  T
Q  317 atagaacaccccttaaaataaaactccc-agacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacct 415  Q
    | ||||||| ||  |||||||||||||| ||||||||||||||||  || |||| |||  ||||||||| ||||||||||||| ||||||||||||| ||    
T  38577654 aaagaacactccacaaaataaaactccccagacttcaacacccaagttgcgccatattcgaaaagctccaaaccgaatgaacatgcagcttccacaaact 38577753  T
Q  416 ctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaa 502  Q
    ||||||| | |||||||||||||||||||||||||||| | |||||||||||| | | ||||| || ||||||||||||||||||||    
T  38577754 ctcgacctctgatccaccgaaagagcacaaaacaaaagtccaaaaaccaacttaaaccaaagaactaactcccgatctcgaatcaaa 38577840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 269 - 670
Target Start/End: Complemental strand, 9519764 - 9519359
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttc-aacacccaaactgagc 367  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||||| || ||||||||| | |||||||||||| |||||  | ||||||||| ||||||    
T  9519764 cactgtaaacacggtatccaccaccgcccatcgtcactactcacccacaaagaacaccc-tcaaaataaaactctcagacccccaacacccaagctgagc 9519666  T
Q  368 cacatttcaaa-agctcctaaccgaatgaacaagcagcttccacaacct-ctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaa 465  Q
    || ||||| || ||| ||||||||||||| || ||||||  ||||| || | | ||| |||| ||||||||||||||||| ||||| | | |||||||||    
T  9519665 catatttcgaagagcacctaaccgaatgatcatgcagctatcacaaacttcgcaacctccgacccaccgaaagagcacaacacaaa-gcccaaaaaccaa 9519567  T
Q  466 cttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacacca 565  Q
    ||| ||  ||||| |||||||||||||||||||||||| |||||||||||| | ||| ||| ||||||| ||||||||||||||  ||||||||||||||    
T  9519566 cttgagtcaaagaactgactcccgatctcgaatcaaaactgatcggcccactagactatagtaccaaattagcagggcacccctcacccccggtacacca 9519467  T
Q  566 gagaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatg 662  Q
    ||||| || || ||||||||||||| | ||| || ||||||  | |||| |||||||||||| |||| |||||||  |||| ||||||||||||||||||    
T  9519466 gagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctactgaaaaccagcacacaatatg 9519367  T
Q  663 taagacga 670  Q
    ||||||||    
T  9519366 taagacga 9519359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 272 - 670
Target Start/End: Original strand, 37986678 - 37987079
Alignment:
Q  272 tgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccaca 371  Q
    ||||||||||||||| || ||||||||||| || ||||||||| || ||||||||| |  |||||||||||||||||   ||||||||| ||||||||||    
T  37986678 tgtaaacacggtatctaccaccacccatcgtcattactcacccacaaagaacaccc-tccaaataaaactcccagaccgaaacacccaagctgagccaca 37986776  T
Q  372 tttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttc 469  Q
    |||| || ||| |||||||||| || || ||||||  ||||| |||| ||||| |||| ||||||||||||||||| |||||   | ||||||||||||     
T  37986777 tttcgaagagcacctaaccgaaggatcaggcagctatcacaaacctcgcgacctccgaaccaccgaaagagcacaacacaaagcac-aaaaaccaacttg 37986875  T
Q  470 agcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagaga 569  Q
    ||  ||||| |||||||||||||||||||||||| |||| ||||||||| ||| ||  ||||||| |||||||||||||| |||||||||||||||||||    
T  37986876 agtcaaagaactgactcccgatctcgaatcaaaaatgattggcccaccagactataacaccaaattagcagggcacccctcgcccccggtacaccagaga 37986975  T
Q  570 acaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgtaag 666  Q
    | || || ||||||||||| | | | | |||||||||  | |||  |||||||||||| |||| ||||||| ||| | ||||||||||||||||||||||    
T  37986976 aaaaccaaatcaagtcaaataaagaatgcaactagaccccgactaccgatctcgaagccaaatgaaccggcccaccgaaaaccagcacacaatatgtaag 37987075  T
Q  667 acga 670  Q
    ||||    
T  37987076 acga 37987079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 272 - 676
Target Start/End: Original strand, 24995214 - 24995622
Alignment:
Q  272 tgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttc-aacacccaaactgagccac 370  Q
    |||||||||||||||||| ||| ||||||| |||||||||| | || ||||||||| | ||||||||||||| ||||  | ||||||||| ||||||||     
T  24995214 tgtaaacacggtatccaccaccgcccatcgtcactactcacgcacaaagaacaccc-tcaaaataaaactcctagacccccaacacccaagctgagccat 24995312  T
Q  371 atttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaactt 468  Q
    ||||| || ||| |||||||||| || || ||||||  ||||| |||| ||||| | || |||| |||||||||||| ||||| | | ||||||||||||    
T  24995313 atttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctctgacccactgaaagagcacaacacaaa-gcccaaaaaccaactt 24995411  T
Q  469 cagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag 568  Q
     ||  ||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| |||| | ||||||| |||||| |||||||||||    
T  24995412 gagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcaagacacccctcgcccccagtacaccagag 24995511  T
Q  569 aacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgtaa 665  Q
    || || || ||||||||||||| | ||| || ||||||  | |||| |||||||||||| |||| ||||||| ||| | |||||||||||||||||||||    
T  24995512 aaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaaccagcacacaatatgtaa 24995611  T
Q  666 gacgataaaca 676  Q
    ||||| |||||    
T  24995612 gacgaaaaaca 24995622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 276 - 670
Target Start/End: Original strand, 32066119 - 32066516
Alignment:
Q  276 aacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttc 375  Q
    ||||| |||||||| ||| ||||||| |||||||||| | || ||||||||| |  ||||||||||| |||||  |||||||||| |||| |||||||||    
T  32066119 aacactgtatccaccaccgcccatcgtcactactcactcacaaagaacaccc-tccaaataaaactctcagaccccaacacccaagctgaaccacatttc 32066217  T
Q  376 aaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagca 473  Q
    ||| |||  |||||||||||| || ||||||  ||||| |||| | ||| | || ||||||||||||||||| ||||| | | |||||||||||  ||      
T  32066218 aaagagcatctaaccgaatgatcatgcagctatcacaaacctcgcaacctctgaaccaccgaaagagcacaacacaaa-gcccaaaaaccaactggagtc 32066316  T
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaa 573  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||| ||||||||||||| |||||| ||    
T  32066317 aaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcgcccccggtacactagagaaaaa 32066416  T
Q  574 -catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgtaagacga 670  Q
     || ||||||||||||| | ||| |||||||||  | | || ||||||| |||| |||| ||||||| ||| | ||||||||||||||||||||||||||    
T  32066417 ccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcaaagccaaatgaaccggcccaccgaaaaccagcacacaatatgtaagacga 32066516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 363 - 670
Target Start/End: Complemental strand, 36631008 - 36630697
Alignment:
Q  363 tgagccacatttcaaa-agctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaa 461  Q
    ||||||||||||| || ||| ||| |||||| || || |||||| |||||||||| ||||| |||||||| ||||||||||||||||||||| | |||||    
T  36631008 tgagccacatttcgaagagcacctgaccgaaggatcatgcagctcccacaacctcgcgacctccgatccatcgaaagagcacaaaacaaaagcccaaaaa 36630909  T
Q  462 ccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtac 561  Q
    | ||||  ||  ||||| ||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  36630908 caaactagagtcaaagaactgacacccgatctcgaattaaaagtgatcggcccaccagactttagaaccaaattagcagggcacccctcgcccccggtac 36630809  T
Q  562 accagagaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaa 658  Q
    |||| |||| || || ||||||||||||| | ||| || |||||| ||  ||| |||||||||||| |||| |||||||  || | |||||| |||||||    
T  36630808 accaaagaaaaaccaaatcaagtcaaacaaagattgcagctagacctcgtctcccgatctcgaagccaaatgaaccggcctaccgaaaaccaacacacaa 36630709  T
Q  659 tatgtaagacga 670  Q
    ||||||||||||    
T  36630708 tatgtaagacga 36630697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 217 - 447
Target Start/End: Original strand, 35816012 - 35816238
Alignment:
Q  217 aacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactactcaccccc 316  Q
    ||||||||||| | ||||| ||| |||||| |||||||||||||||||||| || ||||||||| |||||||||||||||||||  ||||||||||||||    
T  35816012 aacccaccaaaacccatcaccacttaagacagacaccttaacagaaacaaa-cattgtaaacacagtatccacaaccacccatcatcactactcaccccc 35816110  T
Q  317 atagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctc 416  Q
    | ||||||||||| ||||   ||||| | |||||||||| |||||||||||||||||  |||| ||| |||||||||||||| ||||||||||||| |||    
T  35816111 aaagaacacccctcaaaa---aactctctgacttcaacatccaaactgagccacattcgaaaaactcttaaccgaatgaacatgcagcttccacaatctc 35816207  T
Q  417 tcgaccaccgatccaccgaaagagcacaaaa 447  Q
    || ||| |||||||||| |||||||||||||    
T  35816208 tcaacctccgatccaccaaaagagcacaaaa 35816238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 269 - 570
Target Start/End: Original strand, 31207179 - 31207479
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    |||||||||||| |||||||| | | ||||||| |||||||||||| || ||||||||| | ||||||||||||||| ||| |||||||||| |||||||    
T  31207179 cactgtaaacacagtatccaccatcgcccatcgtcactactcacccacaaagaacaccc-tcaaaataaaactcccatactccaacacccaagctgagcc 31207277  T
Q  369 acatttc-aaaagctcctaaccgaatgaacaagcagcttccac-aacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||||| || ||| |||||||||| |  ||  |||||  ||| |||||| ||||| |||||||||||||| ||||||| || |||  | |||| |||||    
T  31207278 acatttcgaagagcacctaaccgaagggtcattcagctatcacaaacctcgcgacctccgatccaccgaaaaagcacaacac-aaatcccaaaatccaac 31207376  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    || ||  ||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||||| |||| ||||| ||||||||||    
T  31207377 ttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggca-ccctcgcccctggtacaccag 31207475  T
Q  567 agaa 570  Q
    ||||    
T  31207476 agaa 31207479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 272 - 670
Target Start/End: Original strand, 34388827 - 34389226
Alignment:
Q  272 tgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccaca 371  Q
    |||||||||| ||||||| ||| || |||| |||||||||||| || ||||||||| | |||||||||||| || ||  |||||||||| ||||||||||    
T  34388827 tgtaaacacg-tatccaccaccgcctatcgtcactactcacccacaaagaacaccc-tcaaaataaaactctcataccccaacacccaagctgagccaca 34388924  T
Q  372 tt-tcaaaagctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttc 469  Q
    |  | || | | |||||| ||| || ||   ||||  ||||| |||| |||||  ||||||||||||| ||||||| ||||| | | ||||||||||||     
T  34388925 tgatgaagaacacctaactgaaggatcact-agctatcacaaacctcacgacctacgatccaccgaaatagcacaacacaaa-gcccaaaaaccaacttg 34389022  T
Q  470 agcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagaga 569  Q
    ||  ||||| |||||||  |||||||||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||| ||||| |||||||||||||    
T  34389023 agtcaaagaactgactcttgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcgcccctggtacaccagaga 34389122  T
Q  570 acaa-catatcaagtcaaac-ataattccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgtaag 666  Q
    | || || |||||||||||| | |||| || ||||||  | |||| |||||||||||| |||| |||||||  |  | ||||||||||||||||||||||    
T  34389123 aaaaccaaatcaagtcaaacaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctatcgaaaaccagcacacaatatgtaag 34389222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 269 - 511
Target Start/End: Complemental strand, 20138691 - 20138448
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||||||||||||||| |||  |||||| |||||||||||  || |||||||||   ||||||||||||||||||  |||||||||| | | | |    
T  20138691 cactgtaaacacggtatccaccaccgtccatcgtcactactcacctacaaagaacaccctcaaaaataaaactcccagaccccaacacccaagccgggtc 20138592  T
Q  369 acatttc-aaaagctcctaaccgaatgaacaagcagcttccac-aacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||||| || ||| |||||||||| || || ||||||  ||| |||||| ||||| |||||||||||||||||||||| || |||| | ||||||||||    
T  20138591 acatttcgaagagcacctaaccgaaggatcatgcagctatcacaaacctcgcgacctccgatccaccgaaagagcacaacac-aaagcccaaaaaccaac 20138493  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcgg 511  Q
     | ||  ||||| ||||||||||||||| ||||||||||||||||    
T  20138492 ataagtcaaagaactgactcccgatctcaaatcaaaagtgatcgg 20138448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 464 - 658
Target Start/End: Original strand, 10248565 - 10248761
Alignment:
Q  464 aacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacac 563  Q
    ||||| ||| ||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| || |||| || ||| |||||||  ||||||||||||    
T  10248565 aacttgagccaaagaactgactcccgatcttgaatcaaaagtgatcggtccaccaaattttaggacaaaattagaaggacacccctcacccccggtacac 10248664  T
Q  564 cagag-aacaacatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaa 658  Q
    ||||| |||| || |||||| |||||| |||| || ||||||| | |||| |||||||||||||||| |||| ||| ||| |||||||| |||||||    
T  10248665 cagagaaacaccaaatcaagccaaacaaaattgcagctagacaccgactcccgatctcgaagcaaaagtaactggcccaccggaaaccaccacacaa 10248761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 356 - 554
Target Start/End: Original strand, 16457364 - 16457562
Alignment:
Q  356 cccaaactgagccacatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaag 453  Q
    ||||| ||||||||||||||||| ||| |||||||  | || || ||||||  ||||| |||| ||||  |||| ||||||||||||||||| ||||| |    
T  16457364 cccaagctgagccacatttcaaagagcacctaaccacaagatcatgcagctatcacaaacctcacgacatccgaaccaccgaaagagcacaacacaaa-g 16457462  T
Q  454 gctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcc 553  Q
     |||||||||||||| ||  ||||| |||||||||||||||||||||||||||||||| |||||||||| ||| | ||||| |||||| ||||||| |||    
T  16457463 cctaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgg-ccaccaaactatagtatcaaattagcaggacacccctcgcc 16457561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 275 - 556
Target Start/End: Original strand, 12898098 - 12898378
Alignment:
Q  275 aaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacattt 374  Q
    ||||| || ||||||||||   ||||| |||||||||||| || ||||||||| | ||||||||||||  ||||  |||||||||| |||||||||||||    
T  12898098 aaacatggaatccacaaccgttcatcgtcactactcacccacaaagaacaccc-tcaaaataaaactctaagaccccaacacccaagctgagccacattt 12898196  T
Q  375 caaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagc 472  Q
    | || ||| |||||||||| || || ||||||  ||||| |||| ||||| |||| ||| ||||||||||||| ||||| | |  ||||||||||| ||     
T  12898197 cgaagagcacctaaccgaaggatca-gcagctatcacaaacctcgcgacctccgaaccatcgaaagagcacaacacaaa-gccccaaaaccaacttgagt 12898294  T
Q  473 aaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgccccc 556  Q
     | | | |||||||| |||||||||||||||||||||||  ||||| ||| ||  ||||||| |  ||||||||||| ||||||    
T  12898295 tagataactgactccggatctcgaatcaaaagtgatcgggtcaccagactatattaccaaattaatagggcacccctcgccccc 12898378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 474 - 570
Target Start/End: Original strand, 30236150 - 30236246
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||| |||| | ||||||||||| |||||||||||| |||||||| ||||||||||    
T  30236150 aaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagacttcaaaaccaaatcagaagggcaccccttacccccggtccaccagagaa 30236246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 270 - 527
Target Start/End: Original strand, 41893220 - 41893475
Alignment:
Q  270 actgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcca 369  Q
    |||||||||||||||||||| |||  |||||| |||||||||||| || |||||| |||| |||||| ||||||||||| ||||||||||| ||||||||    
T  41893220 actgtaaacacggtatccaccaccgaccatcgtcactactcacccacaaagaaca-ccctgaaaatagaactcccagacctcaacacccaagctgagcca 41893318  T
Q  370 catttc-aaaagctcctaaccgaatgaacaagcagcttccac-aacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaact 467  Q
    |||||| || ||  ||| |  ||| || || ||||||  ||| |||||  ||||| |  | ||||| ||||||||||| |||||  ||  |||| |||||    
T  41893319 catttcgaagagtacct-atagaaggatcatgcagctatcacaaaccttgcgacctcttaaccaccaaaagagcacaacacaaa--gcccaaaaacaact 41893415  T
Q  468 tcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttaga 527  Q
    | ||  ||||| ||||||||||||||||||||||||||| | ||||||||| ||| ||||    
T  41893416 tgagacaaagaactgactcccgatctcgaatcaaaagtggttggcccaccagactataga 41893475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 321 - 549
Target Start/End: Original strand, 17656873 - 17657099
Alignment:
Q  321 aacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcga 420  Q
    ||||||||| ||||| |||||||||  | | |||||| ||  |||||||| | | |||||||||||   ||| || ||  |||||||||| |||| ||||    
T  17656873 aacacccctcaaaattaaactcccaatcatgaacaccaaagttgagccacctctgaaaagctcctatatgaaagatcattcagcttccaccacctatcga 17656972  T
Q  421 ccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaa 520  Q
    || ||||||||||||||||   || ||  |||| | |||| | ||||| ||| ||||| ||||||||||||||||||||||||||||||| ||||||| |    
T  17656973 cctccgatccaccgaaagaaaccataa--aaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgacccaccata 17657070  T
Q  521 ctttagaaccaaatcagcagggcacccct 549  Q
    ||||||  |||| | || |||||||||||    
T  17657071 ctttaggtccaacttagaagggcacccct 17657099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 480 - 570
Target Start/End: Complemental strand, 10552321 - 10552232
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    |||||||||||||| |||||||||| ||||||||||||| |||| ||||||||||||| ||||||||||||||||| |||  |||||||||    
T  10552321 ctgactcccgatctagaatcaaaagcgatcggcccaccagacttcagaaccaaatcag-agggcaccccttgcccctggtctaccagagaa 10552232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 32945732 - 32945821
Alignment:
Q  481 tgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||||||||||||||||||||||||||| |||||| | |||| |||| |||||||| || ||||| ||| || ||||| ||| ||||||    
T  32945732 tgactcccgatctcgaatcaaaagtgatcagcccactatacttcagaatcaaatcagaagagcacctcttacctccggtccacgagagaa 32945821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 474 - 533
Target Start/End: Complemental strand, 15906745 - 15906686
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaa 533  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| |||| || ||||||    
T  15906745 aaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagacttcaggaccaaa 15906686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 568
Target Start/End: Original strand, 17720728 - 17720821
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag 568  Q
    ||||| ||||||||||||| ||||||||||| |||| |||||||| ||||||| |||||| |||   |||||||||| |||| ||| ||||||||    
T  17720728 aaagaactgactcccgatc-cgaatcaaaagcgatcagcccaccatactttaggaccaaaccagacaggcaccccttacccctggtccaccagag 17720821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 550
Target Start/End: Complemental strand, 35062510 - 35062440
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccctt 550  Q
    ||||||| ||||||||||||||||  ||||||||||||| |||| |||||||||||||   ||||||||||    
T  35062510 ctgactctcgatctcgaatcaaaatcgatcggcccaccagacttcagaaccaaatcagagaggcacccctt 35062440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 266 - 317
Target Start/End: Complemental strand, 36631091 - 36631040
Alignment:
Q  266 aaacactgtaaacacggtatccacaaccacccatcgccactactcaccccca 317  Q
    |||||||||||||||||||||||| ||| |||||||  ||||||||||||||    
T  36631091 aaacactgtaaacacggtatccaccaccgcccatcgtaactactcaccccca 36631040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 22773699 - 22773658
Alignment:
Q  334 ataaaactcccagacttcaacacccaaactgagccacatttc 375  Q
    |||||||||||||||  |||||||||||||||||||||||||    
T  22773699 ataaaactcccagaccccaacacccaaactgagccacatttc 22773658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 515
Target Start/End: Complemental strand, 40531281 - 40531250
Alignment:
Q  484 ctcccgatctcgaatcaaaagtgatcggccca 515  Q
    ||||||||||||||||||||||||||||||||    
T  40531281 ctcccgatctcgaatcaaaagtgatcggccca 40531250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 518
Target Start/End: Complemental strand, 33967375 - 33967341
Alignment:
Q  484 ctcccgatctcgaatcaaaagtgatcggcccacca 518  Q
    |||| ||||||||||||||||||||||||||||||    
T  33967375 ctcctgatctcgaatcaaaagtgatcggcccacca 33967341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 485 - 519
Target Start/End: Complemental strand, 36796654 - 36796620
Alignment:
Q  485 tcccgatctcgaatcaaaagtgatcggcccaccaa 519  Q
    ||||||||||||||||||||||||||||| |||||    
T  36796654 tcccgatctcgaatcaaaagtgatcggccaaccaa 36796620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 16457292 - 16457337
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcaccc 314  Q
    ||||||||||||||||||||| |||  |||||| ||||||||||||    
T  16457292 cactgtaaacacggtatccaccaccgtccatcgtcactactcaccc 16457337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 481 - 537
Target Start/End: Original strand, 41791293 - 41791349
Alignment:
Q  481 tgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcag 537  Q
    |||||| ||||||||||||||||| ||||| |||||  | ||| |||||||||||||    
T  41791293 tgactctcgatctcgaatcaaaagcgatcgacccacttatcttcagaaccaaatcag 41791349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 233; Significance: 1e-128; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 209 - 668
Target Start/End: Complemental strand, 2826104 - 2825648
Alignment:
Q  209 ctgaagataacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactac 308  Q
    ||||||||||||  ||||| ||||||||||||||||||  ||||||||||||||||||| | |||||||| | |||||||||||  ||||||| ||||||    
T  2826104 ctgaagataacct-ccaaaacacatcatcacctaagacaaacaccttaacagaaacaaacc-ctgtaaacgcagtatccacaacgtcccatcgtcactac 2826007  T
Q  309 tcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttcc 408  Q
    ||||||| | ||||||||||| ||||||||||||||| ||||||||||||||||||| |||| ||  ||||||||||||||||||||||| |||||||||    
T  2826006 tcacccc-agagaacacccctcaaaataaaactcccaaacttcaacacccaaactgaaccaccttcgaaaagctcctaaccgaatgaacatgcagcttcc 2825908  T
Q  409 acaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgat 508  Q
    ||||||||| |||| ||||||||||||||||| |||||| ||||| | ||||||||  || ||| |||||| ||| ||||||||||||||||||| ||||    
T  2825907 acaacctctagacctccgatccaccgaaagagtacaaaataaaagcccaaaaaccacattgagccaaagaggtgattcccgatctcgaatcaaaaatgat 2825808  T
Q  509 cggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaacatatcaagtcaaacataattccaactagacatca 608  Q
    |||||||||  ||||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||| ||| || ||||||| ||    
T  2825807 cggcccaccggactttagaaccaaatcagcagagcacccctcgccctcggtacaccagagaacaccatatcaagtcaaacatgattgcagctagacacca 2825708  T
Q  609 actctcgatctcgaagcaaa-ataaccggctcactggaaaccagcacacaatatgtaagac 668  Q
    |||||| ||||||||||||| |||| |||| ||| ||| | || |||||||||||||||||    
T  2825707 actctcaatctcgaagcaaatataatcggcccaccggaca-caacacacaatatgtaagac 2825648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 209 - 660
Target Start/End: Original strand, 31050419 - 31050871
Alignment:
Q  209 ctgaagataacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactac 308  Q
    ||||||||||| || |||| ||||||| ||||||||||| |||||| ||||||| |||| ||||||||||||   |||||| | || |||||| ||||||    
T  31050419 ctgaagataactcatcaaaacacatcaccacctaagacgaacacctcaacagaagcaaa-cactgtaaacacaacatccaccatcatccatcgtcactac 31050517  T
Q  309 tcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttcc 408  Q
    |||||||||  |||||||||| ||||||||||  |||||||||||||||||| || ||||||| |  ||||||||||||||||||||||| |||||||||    
T  31050518 tcacccccaaggaacacccctcaaaataaaacagccagacttcaacacccaagcttagccacaatcgaaaagctcctaaccgaatgaacatgcagcttcc 31050617  T
Q  409 acaacctctcgaccaccgatccaccgaaagagcac-aaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtga 507  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||| | |||||||||||  | | ||||| || ||| |||||||||||||||||||||    
T  31050618 acaacctctcgacctccgatccactgaaagagcacaaaaacaaaagcccaaaaaccaactcaaaccaaagacctaacttccgatctcgaatcaaaagtga 31050717  T
Q  508 tcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaacatatcaagtcaaacataattccaactagacatc 607  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||||||||||| || |||||| ||||||||||||||||  ||| || |||| || |    
T  31050718 tcggcccaccagactttagaaccaaatcagtagggcacccctcgcccccggtacatcaaagaacaccatatcaagtcaaacaggattgcagctagtcacc 31050817  T
Q  608 aactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaata 660  Q
     |||| || ||||||||||||| |||||||| ||| |||||||| |||| ||||    
T  31050818 gactcccggtctcgaagcaaaagtaaccggcccaccggaaaccaacacataata 31050871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 250 - 505
Target Start/End: Original strand, 35341139 - 35341391
Alignment:
Q  250 caccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagact 349  Q
    |||||||||| ||||||| |||||||||||| |||||| ||||||||||||| ||||||||||||| | ||||||||||| ||||||||||||||| |||    
T  35341139 caccttaacaaaaacaaa-cactgtaaacacagtatccgcaaccacccatcgtcactactcacccc-agagaacacccctcaaaataaaactcccaaact 35341236  T
Q  350 tcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaaca 449  Q
    |||||||| |||||||||||||||  |||||||| |||| ||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  35341237 tcaacacc-aaactgagccacattcgaaaagctcataactgaatgaacatgcagcttccacaacctctcgaactccgatccaccgaaagagcacaaaaca 35341335  T
Q  450 aaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagt 505  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| |||||||||    
T  35341336 aaaggccaaaaaccaacttgagccaaagagctgacttccgatctcggatcaaaagt 35341391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 269 - 670
Target Start/End: Complemental strand, 8255291 - 8254887
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    |||||||||||| |||||||| ||  ||||||| |||||||||||| || ||||||||| | |||||||||||| |||||   ||||||||| |||||||    
T  8255291 cactgtaaacacagtatccaccacatcccatcgtcactactcacccacaaagaacaccc-tcaaaataaaactcacagaccctaacacccaagctgagcc 8255193  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||| | || ||| |||||| ||  || |||||||||  ||||| |||| ||||| |||||||||||||||||||||||||||| | | ||||||||||    
T  8255192 acattacgaagagcacctaactgatggatcaagcagctatcacaaacctcgcgacctccgatccaccgaaagagcacaaaacaaa-gcccaaaaaccaac 8255094  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    || ||  ||||| |||||| | ||||||| |||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  8255093 ttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccctcgcccccggtacaccag 8254994  T
Q  567 agaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaag-caaaataaccggctcactggaaaccagcacacaatatgt 663  Q
    |||| || || ||||||| ||||| | ||| || |||||| || |||| ||||||||||| ||||| ||||||| ||| | |||||| ||||||||||||    
T  8254993 agaaaaaccaaatcaagtgaaacaaagattacagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccgaaaaccaacacacaatatgt 8254894  T
Q  664 aagacga 670  Q
    |||||||    
T  8254893 aagacga 8254887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 269 - 670
Target Start/End: Complemental strand, 8268709 - 8268305
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    |||||||||||| |||||||| ||  ||||||| |||||||||||| || ||||||||| | |||||||||||| |||||   ||||||||| |||||||    
T  8268709 cactgtaaacacagtatccaccacatcccatcgtcactactcacccacaaagaacaccc-tcaaaataaaactcacagaccctaacacccaagctgagcc 8268611  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||| | || ||| |||||| ||  || |||||||||  ||||| |||| ||||| |||||||||||||||||||||||||||| | | ||||||||||    
T  8268610 acattacgaagagcacctaactgatggatcaagcagctatcacaaacctcgcgacctccgatccaccgaaagagcacaaaacaaa-gcccaaaaaccaac 8268512  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    || ||  ||||| |||||| | ||||||| |||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  8268511 ttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccctcgcccccggtacaccag 8268412  T
Q  567 agaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaag-caaaataaccggctcactggaaaccagcacacaatatgt 663  Q
    |||| || || ||||||| ||||| | ||| || |||||| || |||| ||||||||||| ||||| ||||||| ||| | |||||| ||||||||||||    
T  8268411 agaaaaaccaaatcaagtgaaacaaagattacagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccgaaaaccaacacacaatatgt 8268312  T
Q  664 aagacga 670  Q
    |||||||    
T  8268311 aagacga 8268305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 269 - 670
Target Start/End: Complemental strand, 30964701 - 30964301
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||| ||| ||| ||| ||| ||||||  |||||||||||| || ||||||||| | ||||||||||||||||     | ||||||| | | |||    
T  30964701 cactgtaaatacgatattcaccaccgcccatcatcactactcacccacaaagaacaccc-tcaaaataaaactcccagt----accacccaagcagggcc 30964607  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||||| || ||| ||||||||||||| || ||||||  ||||| |||| ||||| |||| ||||| ||||||||||| ||||||  | ||||||||||    
T  30964606 acatttcgaagagcacctaaccgaatgatcatgcagctatcacaaacctcgcgacctccgaaccaccaaaagagcacaacacaaaaccc-aaaaaccaac 30964508  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    || ||  ||||| | ||||||||||| |||||||||||||||||||||| || | | ||| ||||||| |||||||||||||| |||| |||||||||||    
T  30964507 ttgagtcaaagaacggactcccgatcacgaatcaaaagtgatcggcccatcagattatagtaccaaattagcagggcacccctcgccctcggtacaccag 30964408  T
Q  567 agaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgt 663  Q
    |||| || || ||||||||||||| | ||| || ||||||  | |||  |||||||||||| |||| ||||||| ||  | |||||||||||||||| ||    
T  30964407 agaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgacttccgatctcgaagccaaatgaaccggcccatcgaaaaccagcacacaataagt 30964308  T
Q  664 aagacga 670  Q
    |||||||    
T  30964307 aagacga 30964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 429 - 668
Target Start/End: Complemental strand, 4305828 - 4305587
Alignment:
Q  429 ccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaa 528  Q
    ||||| ||||||||||| ||||| | |||||||||||||| ||  ||||| || |||||||||||||||||||||||||||| ||||||| ||| ||| |    
T  4305828 ccaccaaaagagcacaacacaaa-gcctaaaaaccaacttgagacaaagaactaactcccgatctcgaatcaaaagtgatcgccccaccagactatagta 4305730  T
Q  529 ccaaatcagcagggcaccccttgcccccggtacaccagagaacaac-atatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagca 626  Q
    |||||| ||||||||||| ||||||||||||||||||||||| ||| | ||| ||||||||| | ||| ||||||| |  | |||| ||||||||||||     
T  4305729 ccaaattagcagggcaccgcttgcccccggtacaccagagaaaaacgaaatccagtcaaacaaagattgcaactagcccccgactcccgatctcgaagcc 4305630  T
Q  627 aaat-aaccggctcactggaaaccagcacacaatatgtaagac 668  Q
    |||| ||||||| ||| | ||||||| ||||||||||||||||    
T  4305629 aaatgaaccggcccaccgaaaaccagtacacaatatgtaagac 4305587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 401 - 630
Target Start/End: Complemental strand, 25753302 - 25753074
Alignment:
Q  401 cagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatca 500  Q
    ||||||||||  ||| |||||| ||||||||||||||||  |||| | ||||| | |||| | ||||| ||| ||||| |||||||||||||||||||||    
T  25753302 cagcttccactgcctatcgacctccgatccaccgaaagaa-acaata-aaaagcccaaaatcaaacttgagccaaagaactgactcccgatctcgaatca 25753205  T
Q  501 aaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aacaacatatcaagtcaaacataattccaac 599  Q
    |||||||||| ||||||| ||||||| ||||||| ||  |||||| |||  || |||||||||||||| |||| || |||| | ||||||  ||| || |    
T  25753204 aaagtgatcgccccaccagactttaggaccaaataagacgggcactcctcacctccggtacaccagagaaacaccacatcacgccaaacaagattgcagc 25753105  T
Q  600 tagacatcaactctcgatctcgaagcaaaat 630  Q
    |||||| | |||| |||||||||||||||||    
T  25753104 tagacaccgactcccgatctcgaagcaaaat 25753074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 449 - 658
Target Start/End: Original strand, 22811157 - 22811367
Alignment:
Q  449 aaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccc 548  Q
    ||||| |||||| | ||||| ||| ||||| ||||||||||||||||||| |||| |||||||||||||| ||||||  |||||||||| ||||||| ||    
T  22811157 aaaagcctaaaaccaaacttgagccaaagaactgactcccgatctcgaataaaaaatgatcggcccaccagactttaagaccaaatcagaagggcactcc 22811256  T
Q  549 ttgcccccggtacaccagag-aacaacatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaa 646  Q
     |  ||||| |||||||||| |||| || ||||   |||||| |||| |||||||||| ||| |  |||||||||||||||| |||||| | ||| | ||    
T  22811257 -tcaccccgatacaccagagaaacaccaaatcacaccaaacaaaattgcaactagacaccaagttccgatctcgaagcaaaagtaaccgacccaccgaaa 22811355  T
Q  647 accagcacacaa 658  Q
    ||||||||||||    
T  22811356 accagcacacaa 22811367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 303 - 629
Target Start/End: Original strand, 19815073 - 19815402
Alignment:
Q  303 cactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagca 402  Q
    ||||||||||||||| |||||||  || || || |||||| ||| | |||||||| ||  | ||||||||   ||||| ||||| ||||| || ||   |    
T  19815073 cactactcacccccaaagaacacttctcaagattaaactctcagtcctcaacaccaaagtttagccacatcggaaaagttcctatccgaaagatcattta 19815172  T
Q  403 gcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaa----aggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaat 498  Q
    |||||||| | ||||||||| ||| |||||||||||| ||| || ||||    |  ||||  |  ||||| ||| ||||| |||||||| ||||||||||    
T  19815173 gcttccaccatctctcgacctccggtccaccgaaagaacaccaatcaaacccaaaactaatta--aacttgagccaaagaactgactcctgatctcgaat 19815270  T
Q  499 caaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaac-atatcaagtcaaacataattcca 597  Q
     |||||| ||||| |||||| ||||||| |||||| ||| |||||||||||  ||||||||  |||||| ||  || |||||||| ||||||  ||| ||    
T  19815271 aaaaagtaatcggtccaccagactttaggaccaaaacagaagggcacccctcacccccggtcaaccagaaaaatacaatatcaagccaaacaagattgca 19815370  T
Q  598 actagacatcaactctcgatctcgaagcaaaa 629  Q
     ||||||| | |||||||||||||||||||||    
T  19815371 gctagacaccgactctcgatctcgaagcaaaa 19815402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 464 - 637
Target Start/End: Original strand, 53823433 - 53823608
Alignment:
Q  464 aacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacac 563  Q
    ||||| ||| ||||| ||||||||||||||||||||||||||||| || |||||| ||||||  |||||||||| |||||||||||  || |||||||||    
T  53823433 aacttgagccaaagaactgactcccgatctcgaatcaaaagtgattggtccaccagactttatgaccaaatcagaagggcacccctcacctccggtacac 53823532  T
Q  564 cagag-aacaacatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggc 637  Q
    ||||| |||| ||  ||||| ||| ||  ||| ||  |||||| | |||| |||||||||||||||| ||||||||    
T  53823533 cagagaaacaccaagtcaagccaagcaagattgcagttagacaccgactcccgatctcgaagcaaaagtaaccggc 53823608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 269 - 549
Target Start/End: Original strand, 30167382 - 30167661
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||||||||||||||| ||| || | || ||| |||||||| || ||||||||| | ||||||||||||||| ||  ||||||||||  || |||    
T  30167382 cactgtaaacacggtatccaccaccgccaa-cgtcaccactcacccacaaagaacaccc-tcaaaataaaactcccataccccaacacccaagttgggcc 30167479  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||||| || ||| | |||||||| |  || ||||||  || || |||| ||||| |||  ||||||||||||||||| |||||   | ||||| ||||    
T  30167480 acatttcgaagagcgcttaaccgaagggtcatgcagctatcataaacctcgcgacctccggaccaccgaaagagcacaacacaaacccc-aaaaatcaac 30167578  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccct 549  Q
    || ||  ||||| | ||||||||||||||||||||||||||||| |||||   ||| ||  |||||||  |||||||||||||    
T  30167579 ttgagtcaaagaaccgactcccgatctcgaatcaaaagtgatcgacccacttgactataataccaaataggcagggcacccct 30167661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 303 - 647
Target Start/End: Complemental strand, 19673328 - 19672985
Alignment:
Q  303 cactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagca 402  Q
    ||||||||||||||| ||||||| ||| ||||| |||||| ||| | |||||||| ||  | ||||||||   ||||| || || || ||  | ||   |    
T  19673328 cactactcacccccaaagaacactcctcaaaattaaactctcagtcctcaacaccaaagtttagccacatccgaaaagttcatatccaaaatatcattta 19673229  T
Q  403 gcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaa 502  Q
    |||||||| | || ||||||  ||||||||||||||| ||| || |||||  | ||||   ||||| ||| ||||| |||||||| |||||||||| |||    
T  19673228 gcttccaccatctatcgaccgtcgatccaccgaaagaacaccaa-caaaaccc-aaaactaaacttgagccaaagaactgactcctgatctcgaat-aaa 19673132  T
Q  503 agtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aacaacatatcaagtcaaacataattccaacta 601  Q
    || ||  || |||||| ||||||| |||||| ||| |||||||||||  |||||| |  ||||||| || | ||||||||| ||||||  ||| || |||    
T  19673131 agggaatggtccaccagactttaggaccaaaacagaagggcacccctcacccccgatcaaccagagaaatatcatatcaagccaaacaagattgcagcta 19673032  T
Q  602 gacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaa 647  Q
    ||||   |||| |||||||||||||||| |||||||| |||||||||    
T  19673031 gacactgactcccgatctcgaagcaaaagtaaccggcccactggaaa 19672985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 464 - 570
Target Start/End: Complemental strand, 38929896 - 38929790
Alignment:
Q  464 aacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacac 563  Q
    ||||| ||| ||||| |||||||  ||||||||||||||||||||||||||| || |||| || ||| || |||  ||||||||||| |||||||| |||    
T  38929896 aacttgagccaaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagacttcaggacccaaccagacgggcaccccttacccccggtccac 38929797  T
Q  564 cagagaa 570  Q
    |||||||    
T  38929796 cagagaa 38929790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 474 - 523
Target Start/End: Complemental strand, 16501790 - 16501741
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactt 523  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16501790 aaagagctgactcccgatctcgaatcaaaagcgatcggcccaccaaactt 16501741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 289 - 514
Target Start/End: Original strand, 38637069 - 38637294
Alignment:
Q  289 caaccacccatcgccactactcacccccatagaa---caccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcct 385  Q
    ||||||||||||| |||||||||||||| |||||   ||||||||| | |||||||||||  ||| |||||| ||  ||| || | |    ||||||| |    
T  38637069 caaccacccatcgtcactactcacccccttagaaaaacaccccttatactaaaactcccaatcttgaacaccaaagttgaaccgcctcggcaaagctctt 38637168  T
Q  386 aaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgact 485  Q
    | | ||| || ||  |||||||||| ||||||||||| |||||||||| |||||   || || ||   ||  |||||| |||| ||| |||||  |||||    
T  38637169 atctgaaagatcattcagcttccaccacctctcgacctccgatccaccaaaagaaaccataaaaa---gcccaaaacctacttaagccaaagaattgact 38637265  T
Q  486 cccgatctcgaatcaaaagtgatcggccc 514  Q
    |||||||||||||||||||||||||||||    
T  38637266 cccgatctcgaatcaaaagtgatcggccc 38637294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 472 - 536
Target Start/End: Complemental strand, 49747588 - 49747524
Alignment:
Q  472 caaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatca 536  Q
    ||||||| ||||||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  49747588 caaaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagactttagaaccaaatca 49747524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 548
Target Start/End: Original strand, 46698807 - 46698881
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccc 548  Q
    ||||| |||||||||||||||||||||||||  |||||||||||| |||  || |||||||||| ||||||||||    
T  46698807 aaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagactacaggaccaaatcagaagggcacccc 46698881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 394 - 668
Target Start/End: Complemental strand, 12296312 - 12296038
Alignment:
Q  394 gaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatct 493  Q
    |||||| |||||||||| ||| | | ||| ||| |||||||||||| ||| |||  |||| | |||| | ||||| | | ||||| ||||||   |||||    
T  12296312 gaacaaccagcttccaccaccacacaacctccggtccaccgaaagaacaccaaa--aaagcccaaaatcaaacttgaaccaaagaactgacttttgatct 12296215  T
Q  494 cgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccaga-gaacaacatatcaagtcaaacataa 592  Q
    ||||||||||| | ||||| ||||| |||| || |||||| |||  ||||||||||| |||||||| ||| ||| || || | || | || |||| |  |    
T  12296214 cgaatcaaaagcgctcggcacaccagacttcaggaccaaaccagaggggcaccccttacccccggtccactagaggatcaccgtagctagccaaataaga 12296115  T
Q  593 ttccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaagac 668  Q
     | || ||||||  |||||| |||||||||||||||| ||| |||| |||  ||| |||||||||||||||||||||    
T  12296114 atgcagctagacgccaactcccgatctcgaagcaaaagtaatcggcccaccagaatccagcacacaatatgtaagac 12296038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 474 - 555
Target Start/End: Complemental strand, 35800548 - 35800467
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccc 555  Q
    ||||| |||||| |||||||||||||||||| ||||||  ||||| |||| ||||||||||||| |||||||| ||| ||||    
T  35800548 aaagaactgacttccgatctcgaatcaaaagcgatcggttcaccagacttcagaaccaaatcagaagggcaccacttacccc 35800467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 474 - 570
Target Start/End: Original strand, 2061760 - 2061856
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||| ||||||| | |||||||||||||||||||| |||||||| ||||||| | |||||||  |||||||||||  ||  || ||||||||||||    
T  2061760 aaagaactgactctcaatctcgaatcaaaagtgatcagcccaccagactttaggatcaaatcaagagggcacccctcaccttcgatacaccagagaa 2061856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 481 - 549
Target Start/End: Original strand, 39421042 - 39421110
Alignment:
Q  481 tgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccct 549  Q
    ||||||||||||||||||||||||||||||||||||||  || ||  |||| ||||| |||||||||||    
T  39421042 tgactcccgatctcgaatcaaaagtgatcggcccaccaggctataagaccatatcagaagggcacccct 39421110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 269 - 570
Target Start/End: Complemental strand, 48098599 - 48098296
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaa----caccccttaaaataaaactcccagacttcaacacccaaactg 364  Q
    ||||||||| ||| ||||||  || |||| ||| ||||||||||||||| ||||    ||||||| ||||  |||||||||| ||| |||||| ||  ||    
T  48098599 cactgtaaaaacgatatccatcacaacccgtcgtcactactcacccccaaagaaaatacacccctaaaaaataaactcccagtcttaaacaccaaagttg 48098500  T
Q  365 agccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaacca 464  Q
    ||||||||   ||||||||||| | ||| || |   || ||||||| |||||||||||  ||||||| |||||||  || | | ||||| | |||| | |    
T  48098499 agccacatccgaaaagctcctatctgaaagatcgttcatcttccaccacctctcgaccttcgatccatcgaaagaa-actata-aaaagcccaaaaccaa 48098402  T
Q  465 acttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacacc 564  Q
    |||| | | ||  | |||||||||||||||||| |||||||||| |||||| |   |||||  |||||||||| |||||||| ||  ||| |||||||||    
T  48098401 acttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgggctttatgaccaaatcagaagggcacctctcaccctcggtacacc 48098302  T
Q  565 agagaa 570  Q
     |||||    
T  48098301 tgagaa 48098296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 289 - 439
Target Start/End: Complemental strand, 49528317 - 49528164
Alignment:
Q  289 caaccacccatcgccactactcacccccatagaa---caccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcct 385  Q
    |||||| |||||  |||||||||||||| |||||   ||||||| |||||||||||| ||| ||| |||||| || |||| ||||||    |||||| ||    
T  49528317 caaccatccatcttcactactcacccccttagaaaaacacccctcaaaataaaactctcagtcttgaacaccaaagctgaaccacatccgcaaagcttct 49528218  T
Q  386 aaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaaga 439  Q
    | ||||| || ||  || ||||||| ||||| ||||| ||||||||||||||||    
T  49528217 atccgaaagatcattcatcttccaccacctcccgacctccgatccaccgaaaga 49528164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 269 - 370
Target Start/End: Original strand, 8705961 - 8706061
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    |||||||||||| |||||||| ||  ||||||| |||||| ||||| || |||||| |||| ||||||||||||  ||||  |||||||||| |||||||    
T  8705961 cactgtaaacacagtatccaccactgcccatcgtcactacccacccacaaagaaca-ccctcaaaataaaactcttagaccccaacacccaagctgagcc 8706059  T
Q  369 ac 370  Q
    ||    
T  8706060 ac 8706061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 20464857 - 20464796
Alignment:
Q  266 aaacactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccc 327  Q
    |||| ||||||||||||||||||| ||| ||||||| ||||||||||||||| | |||||||    
T  20464857 aaaccctgtaaacacggtatccaccaccgcccatcgtcactactcacccccaaataacaccc 20464796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 482 - 537
Target Start/End: Original strand, 6599975 - 6600030
Alignment:
Q  482 gactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcag 537  Q
    ||||||||||||| ||||||||| ||||||||||||| ||| |||| |||||||||    
T  6599975 gactcccgatctctaatcaaaagcgatcggcccaccagactctagagccaaatcag 6600030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 475 - 542
Target Start/End: Original strand, 21387227 - 21387294
Alignment:
Q  475 aagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcaggg 542  Q
    |||| |||||| ||||||||||||||||||||||||| |||||| |||  || |||||||||| ||||    
T  21387227 aagaactgacttccgatctcgaatcaaaagtgatcggtccaccagactccagcaccaaatcagaaggg 21387294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 483 - 522
Target Start/End: Complemental strand, 26474886 - 26474847
Alignment:
Q  483 actcccgatctcgaatcaaaagtgatcggcccaccaaact 522  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  26474886 actctcgatctcgaatcaaaagtgatcggcccaccaaact 26474847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 480 - 562
Target Start/End: Original strand, 19311371 - 19311451
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtaca 562  Q
    |||||||||| |||||||||||||||||||| ||||||| || ||| ||||||||||| ||| |||||||  |||||| ||||    
T  19311371 ctgactcccg-tctcgaatcaaaagtgatcgacccaccagac-ttaaaaccaaatcagaaggacacccctcacccccgttaca 19311451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 480 - 518
Target Start/End: Original strand, 39041302 - 39041340
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccacca 518  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  39041302 ctgactcctgatctcgaatcaaaagtgatcggcccacca 39041340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 518
Target Start/End: Original strand, 40813813 - 40813847
Alignment:
Q  484 ctcccgatctcgaatcaaaagtgatcggcccacca 518  Q
    |||||||||||||||||||||||||||||||||||    
T  40813813 ctcccgatctcgaatcaaaagtgatcggcccacca 40813847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 537
Target Start/End: Original strand, 36962643 - 36962700
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcag 537  Q
    |||||||| ||||||||||||||||| |||||||||||| |||  | |||||||||||    
T  36962643 ctgactcctgatctcgaatcaaaagtaatcggcccaccagactccaaaaccaaatcag 36962700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 480 - 536
Target Start/End: Complemental strand, 2165560 - 2165505
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatca 536  Q
    ||||||||||||||| ||||||||| |||||| |||||||||| ||||| |||||||    
T  2165560 ctgactcccgatctcaaatcaaaagcgatcgg-ccaccaaactctagaaacaaatca 2165505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 523
Target Start/End: Complemental strand, 53756802 - 53756766
Alignment:
Q  487 ccgatctcgaatcaaaagtgatcggcccaccaaactt 523  Q
    |||||||||||||||||||||||||||||||| ||||    
T  53756802 ccgatctcgaatcaaaagtgatcggcccaccagactt 53756766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 283 - 317
Target Start/End: Original strand, 21387034 - 21387068
Alignment:
Q  283 tatccacaaccacccatcgccactactcaccccca 317  Q
    |||||| ||||||||||||||||||||||||||||    
T  21387034 tatccataaccacccatcgccactactcaccccca 21387068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 437
Target Start/End: Original strand, 39420914 - 39421000
Alignment:
Q  351 caacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaa 437  Q
    ||||||| || || |||||||||| ||||||||||| | |||  | ||| ||| |||||| ||||||||| | ||||||||||||||    
T  39420914 caacaccgaagctaagccacatttgaaaagctcctatctgaaatatcaatcagtttccaccacctctcgatctccgatccaccgaaa 39421000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 599 - 668
Target Start/End: Original strand, 46698933 - 46699002
Alignment:
Q  599 ctagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaagac 668  Q
    ||||||| |||||| |||||||||||||||| ||| |||| |||  ||| |||||||||||||||||||||    
T  46698933 ctagacaccaactcccgatctcgaagcaaaagtaatcggcccac-agaatccagcacacaatatgtaagac 46699002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 513
Target Start/End: Original strand, 2792302 - 2792335
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcc 513  Q
    |||||| |||||||||||||||||||||||||||    
T  2792302 ctgacttccgatctcgaatcaaaagtgatcggcc 2792335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 518
Target Start/End: Original strand, 37707392 - 37707421
Alignment:
Q  489 gatctcgaatcaaaagtgatcggcccacca 518  Q
    ||||||||||||||||||||||||||||||    
T  37707392 gatctcgaatcaaaagtgatcggcccacca 37707421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 484 - 516
Target Start/End: Complemental strand, 10388610 - 10388578
Alignment:
Q  484 ctcccgatctcgaatcaaaagtgatcggcccac 516  Q
    ||||||| |||||||||||||||||||||||||    
T  10388610 ctcccgacctcgaatcaaaagtgatcggcccac 10388578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 484 - 516
Target Start/End: Original strand, 17416541 - 17416573
Alignment:
Q  484 ctcccgatctcgaatcaaaagtgatcggcccac 516  Q
    |||| ||||||||||||||||||||||||||||    
T  17416541 ctcctgatctcgaatcaaaagtgatcggcccac 17416573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 490 - 570
Target Start/End: Original strand, 21987964 - 21988044
Alignment:
Q  490 atctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||||||||||||| ||||||  || || |||| || ||| || |||  ||||||||||| |||||||| ||||||||||    
T  21987964 atctcgaatcaaaagcgatcggttcatcagacttcaggacccaaccagacgggcaccccttacccccggtccaccagagaa 21988044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 6e-73; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 272 - 670
Target Start/End: Complemental strand, 34378359 - 34377958
Alignment:
Q  272 tgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccaca 371  Q
    |||||||||||||||||| |||  |||||| |||||||||||| || |||||| |||| |||||||||||| || ||  |||||||||| ||||||||||    
T  34378359 tgtaaacacggtatccaccaccgtccatcgtcactactcacccacaaagaaca-ccctcaaaataaaactctcaaaccccaacacccaagctgagccaca 34378261  T
Q  372 tttc-aaaagctcctaaccgaatgaacaagcagcttccac-aacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttc 469  Q
    || | || |||  ||||||||| || ||| || ||  ||| |||||| ||||| ||| ||||||||||||||||||||| |||| | ||||||||||||     
T  34378260 ttacgaagagcatctaaccgaaggatcaaacaactatcacaaacctcgcgacctccggtccaccgaaagagcacaaaac-aaagcccaaaaaccaacttg 34378162  T
Q  470 agcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagaga 569  Q
     |  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  34378161 tgtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcactccttgcccccggtacaccagaga 34378062  T
Q  570 aca-acatatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgtaag 666  Q
    | |  || ||||||||||||| | ||| || |||||| || |||| |||||||||||| |||| |||||||  || | |||||||||||| |||| ||||    
T  34378061 aaacccaaatcaagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcctaccgaaaaccagcacacgatatataag 34377962  T
Q  667 acga 670  Q
    ||||    
T  34377961 acga 34377958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 269 - 670
Target Start/End: Complemental strand, 18593507 - 18593103
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||||| || |||||| || |  |||||||||||||||||  ||||||||||  ||||||    
T  18593507 cactgtaaacacggtatccaccaccgcccatcgtcactactcacccacaaagaacatcc-tccaaataaaactcccagaccccaacacccaagttgagcc 18593409  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccacaac-ctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||||| || | | |||||||||| || || ||| ||  |||||  ||| ||||| |||| ||||||||||||||||| || || | | ||||||||||    
T  18593408 acatttcgaagaacacctaaccgaaggatcatgcacctatcacaaatctcgcgacctccgaaccaccgaaagagcacaacactaa-gcccaaaaaccaac 18593310  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    || ||  ||||| || ||||||||||||||||||||||||||| |||||| ||||| ||| ||||||| ||||||||| |||| ||||||||||||| ||    
T  18593309 ttgagtcaaagaactaactcccgatctcgaatcaaaagtgatctgcccactaaactatagcaccaaattagcagggcatccctcgcccccggtacacgag 18593210  T
Q  567 agaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatgt 663  Q
    |||| || || ||||||||||||| | ||| |||||||||  | |||| |||||||||||| |||| ||||||| ||| | ||| |||||||||||||||    
T  18593209 agaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgt 18593110  T
Q  664 aagacga 670  Q
    || ||||    
T  18593109 aaaacga 18593103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 267 - 670
Target Start/End: Complemental strand, 698626 - 698221
Alignment:
Q  267 aacactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgag 366  Q
    |||||||||||  |||||||||| | | || |||| |||||||||||| || ||||||||| |  ||||||||||| |||||  |||||||||| |||||    
T  698626 aacactgtaaat-cggtatccaccatcgccgatcgtcactactcacccacaaagaacaccc-tccaaataaaactctcagaccccaacacccaagctgag 698529  T
Q  367 ccacatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaacca 464  Q
    |||||||||||| ||| |||||||||| ||  | ||||||  ||||| |||| | ||| | || |||| ||||||| |||| ||||| | | ||||||||    
T  698528 ccacatttcaaagagcacctaaccgaaggattatgcagctatcacaaacctcgcaacctctgaaccacagaaagagtacaacacaaa-gcccaaaaacca 698430  T
Q  465 acttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacacc 564  Q
    |||| ||  |||||| |||||||||||||||||||||||| |||||| |||||| ||| ||| ||||||| |||||||||||||| ||||||||||||||    
T  698429 acttgagtcaaagagttgactcccgatctcgaatcaaaagagatcggtccaccagactatagcaccaaattagcagggcacccctcgcccccggtacacc 698330  T
Q  565 agagaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatat 661  Q
    |||||| || || ||||||||||||| | ||| |||||||||    |||| |||||||||||| |||| ||||||| ||||  |||||||||||||||||    
T  698329 agagaaaaaccaaatcaagtcaaacaaagattgcaactagaccctgactcccgatctcgaagccaaatgaaccggcccactaaaaaccagcacacaatat 698230  T
Q  662 gtaagacga 670  Q
    |||||||||    
T  698229 gtaagacga 698221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 269 - 570
Target Start/End: Complemental strand, 29087743 - 29087444
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||||||||||| ||| ||| ||||||| ||||||||||||| | ||||   |||| |||||||| |||||||||  ||||| | ||  ||||||    
T  29087743 cactgtaaacacggtattcaccaccgcccatcgtcactactcacccctaaagaaa--ccctcaaaataaagctcccagaccccaacatctaagttgagcc 29087646  T
Q  369 acatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaactt 468  Q
    ||||   || ||| ||| ||| || || || | |||| ||| |||||| ||||| |||||||||||||||||||||||||||||| | | ||||||| ||    
T  29087645 acatacgaagagcacctgaccaaaggatcatggagctaccataacctcgcgacctccgatccaccgaaagagcacaaaacaaaagcccagaaaccaattt 29087546  T
Q  469 cagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag 568  Q
     |   ||||| |||||||| |||||||||||||||| |||| | |||||| ||||||||||||||  ||||| |||||||| |||||||||||| |||||    
T  29087545 gattcaaagaactgactcctgatctcgaatcaaaagggatcagtccaccagactttagaaccaaaatagcagagcacccctcgcccccggtacaacagag 29087446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 321 - 652
Target Start/End: Complemental strand, 8297678 - 8297347
Alignment:
Q  321 aacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcga 420  Q
    ||||||||| ||||| ||||||||   | | |||||| |||| |||||||||   ||||||||||| ||||| || ||  || ||||||| ||||| |||    
T  8297678 aacacccctcaaaattaaactccccatcatgaacaccaaaaccgagccacatccgaaaagctcctatccgaaagaccattcaacttccaccacctcacga 8297579  T
Q  421 ccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaa 520  Q
    || ||||| ||||||||||   || ||  |||| | |||| | ||||| ||| ||||| |||||||||||||||||||||||| | ||  ||||||||      
T  8297578 cctccgattcaccgaaagaaaccataa--aaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaaattattagcccaccatg 8297481  T
Q  521 ctttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aacaacatatcaagtcaaacataattccaactagacatcaactctcgatct 619  Q
    ||||||||||||||||| |||||||||||  ||| |||||||| |||| |||| || ||||||  ||||| |||| || ||||||| |||||||||||||    
T  8297480 ctttagaaccaaatcagaagggcacccctcaccctcggtacactagagaaacaccaaatcaagcaaaacaaaattgcagctagacaccaactctcgatct 8297381  T
Q  620 cgaagcaaaa-taaccggctcactggaaaccagc 652  Q
    |||||||||| ||| |||| ||||| ||||||||    
T  8297380 cgaagcaaaagtaatcggcccactgaaaaccagc 8297347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 474 - 629
Target Start/End: Original strand, 7392053 - 7392209
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aaca 572  Q
    ||||| |||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||| |||||||||||  ||| ||||||| ||||| ||||    
T  7392053 aaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaagggcacccctcaccctcggtacatcagagaaaca 7392152  T
Q  573 acatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa 629  Q
     || |||||| ||||||  ||| || ||||||| |||||| ||||||||||||||||    
T  7392153 ccaaatcaagccaaacaagattgcagctagacaccaactcccgatctcgaagcaaaa 7392209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 481 - 658
Target Start/End: Original strand, 13954263 - 13954441
Alignment:
Q  481 tgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aacaacatatc 579  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | |||||||||  ||  ||||||||||||| ||||  | |||    
T  13954263 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcag-aaggcacccctcaccttcggtacaccagagaaacacaaaatc 13954361  T
Q  580 aagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaa 658  Q
    |||||||| |  ||| || ||||||| | ||||| ||||||||||||||| |||||||| ||| | ||||||||| ||||    
T  13954362 aagtcaaataagattgcagctagacaccgactcttgatctcgaagcaaaagtaaccggcccaccgaaaaccagcatacaa 13954441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 217 - 372
Target Start/End: Original strand, 7161782 - 7161935
Alignment:
Q  217 aacccaccaaatcacatcatcacctaagacggacaccttaacagaaacaaaacactgtaaacacggtatccacaaccacccatcgccactactcaccccc 316  Q
    ||||||||||| |||||||  |||||| || ||| |||| ||| ||||||  ||||||||||||| | ||||| |||||||| || ||||||||||||||    
T  7161782 aacccaccaaaacacatcactacctaaaacagactccttcacaaaaacaag-cactgtaaacacgatttccaccaccacccaacgtcactactcaccccc 7161880  T
Q  317 atagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacat 372  Q
    | |||||| || | ||||||||||||||||||  |||||| ||| |||||||||||    
T  7161881 aaagaaca-ccatcaaaataaaactcccagaccccaacacacaagctgagccacat 7161935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 401 - 647
Target Start/End: Original strand, 7195191 - 7195435
Alignment:
Q  401 cagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatca 500  Q
    |||||||||| ||||||||||| |||||||||||||| |   || ||   ||| | |||  | ||||| ||| ||||| |||||||||||||||||||||    
T  7195191 cagcttccacgacctctcgacctccgatccaccgaaaaaaaccataa---aagcccaaactctaacttgagccaaagaactgactcccgatctcgaatca 7195287  T
Q  501 aaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaac-atatcaagtcaaacataattccaac 599  Q
    |||||||||||| ||||| ||||||   ||||||||| |||||||||||  |||  ||||||||||||||  || | |||| | ||||||  ||| || |    
T  7195288 aaagtgatcggctcaccagactttatggccaaatcagaagggcacccctcaccct-ggtacaccagagaaacactaaatcacgccaaacaatattgcagc 7195386  T
Q  600 tagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaa 647  Q
    ||| || | |||| |||||||||||||||| |||| ||| |||||||||    
T  7195387 tagccaccgactcccgatctcgaagcaaaagtaactggcccactggaaa 7195435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 480 - 570
Target Start/End: Complemental strand, 31721730 - 31721640
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||||||||||||||||||||||| ||||||||||  | |||| ||||||| ||||| |||||||||||| |||||||| ||||||||||    
T  31721730 ctgactcccgatctcgaatcaaaagcgatcggcccattagacttcagaaccacatcagaagggcaccccttacccccggtccaccagagaa 31721640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 474 - 570
Target Start/End: Original strand, 33258904 - 33259000
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||| || ||||| |||||||||||||||||||||||||||||| ||||||| |||||| ||| ||| |||||||  ||  |||||||||||||||    
T  33258904 aaagaactaactcctgatctcgaatcaaaagtgatcggcccaccagactttagcaccaaaacagaaggacacccctcaccttcggtacaccagagaa 33259000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 570
Target Start/End: Original strand, 14302380 - 14302548
Alignment:
Q  400 gcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatc 499  Q
    ||||||||||| ||||||||||| ||||||||||||||||   || ||  |||| | |||| | |||||   | ||||| ||||||||| |||||||| |    
T  14302380 gcagcttccaccacctctcgacctccgatccaccgaaagaaaccataa--aaagcccaaaaccaaacttgctccaaagaactgactcccaatctcgaacc 14302477  T
Q  500 aaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    |||||||||| | |||||| ||||||| |||||| ||| |||||| ||||  ||| || ||||||||||||    
T  14302478 aaaagtgatcagtccaccagactttaggaccaaaacagaagggcatccctcaccctcgatacaccagagaa 14302548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 474 - 668
Target Start/End: Original strand, 24072288 - 24072484
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaa 573  Q
    ||||| |||||| |||||||| ||||||||| |||| ||| |||| ||||||| |||||||||| ||||||||||   ||| |||| ||||||||||  |    
T  24072288 aaagaactgacttccgatctcaaatcaaaagcgatcagccaaccagactttaggaccaaatcagaagggcaccccaaaccctcggtccaccagagaaaca 24072387  T
Q  574 ca-tatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaagac 668  Q
    |  || | |  ||||||  ||| || ||| ||  |||||| |||||| ||||||||| |||||||| |||| ||| ||||||||||| |||||||||    
T  24072388 ctgtagctatccaaacaagattacagctaaacgccaactcccgatcttgaagcaaaagtaaccggcccactagaatccagcacacaacatgtaagac 24072484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 402 - 488
Target Start/End: Original strand, 7162267 - 7162353
Alignment:
Q  402 agcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactccc 488  Q
    |||||||| |||||| ||||| |||||||| ||||||||||||||||||||  | |||||||||||| ||  ||||| |||||||||    
T  7162267 agcttccataacctcgcgacctccgatccatcgaaagagcacaaaacaaaaacccaaaaaccaacttgagtcaaagaactgactccc 7162353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 480 - 550
Target Start/End: Complemental strand, 12046308 - 12046238
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccctt 550  Q
    |||| |||||||||||||||||||||||||||||||||||||||  ||| |||||||  | ||||||||||    
T  12046308 ctgagtcccgatctcgaatcaaaagtgatcggcccaccaaacttccgaatcaaatcactatggcacccctt 12046238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 481 - 568
Target Start/End: Original strand, 17854096 - 17854183
Alignment:
Q  481 tgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag 568  Q
    |||||||||||||||| ||||||| | ||||||||||| |||| |  ||||||| || |||||||||||  |||||||| ||||||||    
T  17854096 tgactcccgatctcgagtcaaaagcggtcggcccaccatacttcaagaccaaattagaagggcacccctcacccccggtccaccagag 17854183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 530
Target Start/End: Original strand, 22675336 - 22675402
Alignment:
Q  464 aacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaacc 530  Q
    ||||| ||| ||||| ||||||||||||||||||||||||  |||||| |||||| |||||||||||    
T  22675336 aacttgagccaaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagactttagaacc 22675402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 533
Target Start/End: Complemental strand, 25992083 - 25992007
Alignment:
Q  458 aaaaccaacttc-agcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaa 533  Q
    ||||||||| || ||| ||||| ||||||| ||||||||||||||||| ||| ||||||||| ||||||| ||||||    
T  25992083 aaaaccaacctcgagctaaagaactgactctcgatctcgaatcaaaagcgattggcccaccagactttagcaccaaa 25992007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 483 - 570
Target Start/End: Original strand, 26045995 - 26046082
Alignment:
Q  483 actcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaa-tcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    |||||||||||||||||||||||||||||  ||||| ||||||| |||||| |||  | ||||||||||   |||||||||||||||||    
T  26045995 actcccgatctcgaatcaaaagtgatcggttcaccagactttaggaccaaactcaaaaaggcacccctt-aacccggtacaccagagaa 26046082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 474 - 518
Target Start/End: Original strand, 39184209 - 39184253
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccacca 518  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||    
T  39184209 aaagaactgacttccgatctcgaatcaaaagtgatcggcccacca 39184253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 481 - 547
Target Start/End: Original strand, 39024479 - 39024545
Alignment:
Q  481 tgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccc 547  Q
    |||||||||||||||||||||||| ||| |  ||||||||||| || ||||| |||| |||||||||    
T  39024479 tgactcccgatctcgaatcaaaagcgattgagccaccaaacttcaggaccaactcagaagggcaccc 39024545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 518
Target Start/End: Original strand, 21402859 - 21402903
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccacca 518  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||    
T  21402859 aaagaactgactcccgatctcgaactaaaagtgatcggcccacca 21402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 533
Target Start/End: Complemental strand, 23426402 - 23426344
Alignment:
Q  475 aagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaa 533  Q
    |||| ||||||||| ||||||||||||||||| |||| |||||| |||| || ||||||    
T  23426402 aagaactgactcccaatctcgaatcaaaagtgttcggtccaccagacttcaggaccaaa 23426344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 570
Target Start/End: Complemental strand, 27713138 - 27713032
Alignment:
Q  464 aacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacac 563  Q
    ||||| ||| ||||| |||| |||||||||||||||||||  ||||||||||| | |||| || ||| || |||  ||||| |||||  |||| || |||    
T  27713138 aacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggcccactagacttcaggacccaaccagacgggcaacccttatccccagtccac 27713039  T
Q  564 cagagaa 570  Q
    |||||||    
T  27713038 cagagaa 27713032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 474 - 550
Target Start/End: Complemental strand, 8730976 - 8730900
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccctt 550  Q
    ||||| ||||||||||||||||||| ||||| ||| || |||||| |||  |  |||||||||  ||||||||||||    
T  8730976 aaagaactgactcccgatctcgaattaaaagcgataggtccaccagactgcaagaccaaatcataagggcacccctt 8730900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 4e-52; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 269 - 667
Target Start/End: Complemental strand, 3117757 - 3117355
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    |||||||||||||||| |||| ||| | ||||| | ||||| |||| || |||||||||  |||| ||||||||||||||  ||||||||||  ||||||    
T  3117757 cactgtaaacacggtaaccaccaccgctcatcgtctctacttacccacaaagaacaccctataaa-taaaactcccagaccccaacacccaagttgagcc 3117659  T
Q  369 acatttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaac 466  Q
    ||||||| || ||| | ||| |||| || || ||| ||  ||||| |||| ||||| |||| ||||  ||||||||||| ||||| | | ||||||||||    
T  3117658 acatttcgaagagcacataatcgaaggatcatgcaactatcacaaacctcgcgacctccgaaccacataaagagcacaacacaaa-gcccaaaaaccaac 3117560  T
Q  467 ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccag 566  Q
    || ||  ||||| |||||||||||||| |||||||||||||||||||||||| ||| ||  | ||||| |||||||||||||| |||||||| |||||||    
T  3117559 ttgagtcaaagaactgactcccgatcttgaatcaaaagtgatcggcccaccatactatatcaacaaattagcagggcacccctcgcccccggaacaccag 3117460  T
Q  567 agaacaa-catatcaagtc-aaacata-attccaactagacatcaactctcgatctcgaagcaaaat-aaccggctcactggaaaccagcacacaatatg 662  Q
    |||| || || |||||||| ||||| | ||| |||||||||  | |||| | |||||||||| |||| ||||||| ||||| |||||| |||||||||||    
T  3117459 agaaaaaccaaatcaagtcaaaacaaagattgcaactagaccccgactcccaatctcgaagccaaatgaaccggcccactgaaaaccaacacacaatatg 3117360  T
Q  663 taaga 667  Q
    |||||    
T  3117359 taaga 3117355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 457 - 637
Target Start/End: Original strand, 16510306 - 16510489
Alignment:
Q  457 aaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgccccc 556  Q
    |||||||||||| || |||||| ||||||| | ||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| |    
T  16510306 aaaaaccaacttgagtaaaagaactgactctcaatctcgaatcaaaagtgatcggcccactagactttagaaccaaattagcagggcaccccttgccctc 16510405  T
Q  557 ggtacaccagagaacaa-catatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaa-taaccggc 637  Q
    |||||||||||||| || |||||||||||||||| | ||| || ||||||  | |||| |||||||||||||||| ||||||||    
T  16510406 ggtacaccagagaaaaaccatatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagcaaaagtaaccggc 16510489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 269 - 658
Target Start/End: Original strand, 20701618 - 20702011
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaa----caccccttaaaataaaactcccagacttcaacacccaaactg 364  Q
    ||||||||| ||| ||||||  || |||||||| ||||||||||||||| | ||    ||||| ||||||  ||||||| || ||| |||| | ||  ||    
T  20701618 cactgtaaaaacgatatccaatactacccatcgtcactactcacccccaaaaaaaaaacaccctttaaaaacaaactcctagtcttgaacaacaaagttg 20701717  T
Q  365 agccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaacca 464  Q
    |||||||||  ||||||||||| ||||| || ||  |||||||||| ||||||||||| ||||||||||||||||   || ||  |||| | |||| | |    
T  20701718 agccacattcgaaaagctcctatccgaaagatcattcagcttccactacctctcgacctccgatccaccgaaagaaaccataa--aaagcccaaaaccaa 20701815  T
Q  465 acttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacacc 564  Q
    |||| ||| ||||| || |||||||||||||||||||||||||||||| |||||  ||  |  |||||||||| |||||||||||  |||||||||||||    
T  20701816 acttaagccaaagaactaactcccgatctcgaatcaaaagtgatcggcacaccagtctaaatgaccaaatcagaagggcacccctcacccccggtacacc 20701915  T
Q  565 agagaacaa-catatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaa 658  Q
    |||||| || || |||| | |||||| | || || ||||||| | | || ||||||| |||||||| |||||||| ||  |||||||| |||||||    
T  20701916 agagaaaaaccaaatcacgccaaacaaatttgcagctagacaccgaatcccgatctcaaagcaaaagtaaccggcccatcggaaaccatcacacaa 20702011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 514 - 660
Target Start/End: Original strand, 15132585 - 15132732
Alignment:
Q  514 caccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaacatatcaagtcaaacataattccaactagacatcaactct 613  Q
    ||||| |||||||||| |||||| |||||||||||| |||||| ||||| ||||||||| ||||||||||||||||  ||| || |||| || | ||||     
T  15132585 caccagactttagaacaaaatcaacagggcacccctcgcccccagtacatcagagaacaccatatcaagtcaaacaggattgcagctagtcaccgactcc 15132684  T
Q  614 cgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaata 660  Q
    |||||||||||||||| |||||||| ||| | |||||| |||||||||    
T  15132685 cgatctcgaagcaaaagtaaccggcccaccgaaaaccatcacacaata 15132732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 475 - 667
Target Start/End: Original strand, 32935362 - 32935556
Alignment:
Q  475 aagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aacaa 573  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| |||| || |||||||||| |||| ||||||  |||||| | || || || ||||     
T  32935362 aagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcaggaccaaatcagaagggaacccctcacccccgatccatcatagaaacac 32935461  T
Q  574 catatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaaga 667  Q
    |||| |||| |||| |  ||| || ||||||| |||||   |||||| |||||||| |||||| | ||| |||| ||||||||||||||||||||    
T  32935462 cataacaagccaaagaagattgcagctagacaccaacttctgatctcaaagcaaaagtaaccgacccaccggaatccagcacacaatatgtaaga 32935556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 492 - 658
Target Start/End: Original strand, 3880623 - 3880791
Alignment:
Q  492 ctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagag-aacaacatatcaagtcaaacat 590  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||  ||| ||||| ||||||| |||| || |||| | ||||||     
T  3880623 ctcgaatcaaaagtgatcggcccaccaaactttaggaccaaatcagaagggcacctctcaccctcggtaaaccagagaaacaccaaatcatgccaaacaa 3880722  T
Q  591 aattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaa 658  Q
     ||  || ||||||| | |||| ||||||| |||||||| |||| ||| ||| ||||||||||| ||||    
T  3880723 gatagcagctagacaccgactcccgatctcaaagcaaaagtaactggcccaccggaaaccagcaaacaa 3880791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 475 - 559
Target Start/End: Original strand, 26216042 - 26216125
Alignment:
Q  475 aagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggt 559  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || |||||| |||||||| |||||||| ||| || |||||    
T  26216042 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacctcttacctccggt 26216125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 480 - 536
Target Start/End: Complemental strand, 34105466 - 34105410
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatca 536  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  34105466 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactctagaaacaaatca 34105410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 269 - 392
Target Start/End: Complemental strand, 10542096 - 10541973
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    |||| |||| ||||||||||| ||| ||||||| |||||||||||| || |||| |||| |  |||||||||| ||||||  |||||||||| |||||||    
T  10542096 cactttaaatacggtatccaccaccgcccatcgtcactactcacccacaaagaataccc-tccaaataaaacttccagaccccaacacccaagctgagcc 10541998  T
Q  369 acatttc-aaaagctcctaaccgaa 392  Q
    ||||||| || ||| ||||||||||    
T  10541997 acatttcgaagagcacctaaccgaa 10541973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 475 - 570
Target Start/End: Complemental strand, 12794173 - 12794077
Alignment:
Q  475 aagagctgactcccgatctcgaatcaaaagt-gatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    |||| |||||||| ||||||||||||||||| ||||||||||| | |||||||||||||| ||| ||| |||||||| |||| ||| ||| ||||||    
T  12794173 aagaactgactcctgatctcgaatcaaaagttgatcggcccactagactttagaaccaaaacagaaggacaccccttacccctggttcactagagaa 12794077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 475 - 546
Target Start/End: Original strand, 26534742 - 26534813
Alignment:
Q  475 aagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacc 546  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| |||| || |||||||||| ||| ||||    
T  26534742 aagaactgactcccaatctcgaatcaaaagtgatcggcccaccagacttcaggaccaaatcagaaggccacc 26534813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 532
Target Start/End: Complemental strand, 9224100 - 9224042
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaa 532  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||| ||||||| |||||    
T  9224100 aaagaactgactcccgatctcgaatcaaaagcgatcagcccaccagactttaggaccaa 9224042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 14663341 - 14663236
Alignment:
Q  269 cactgtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagcc 368  Q
    ||||||||||||  ||||||| ||| ||||||| |||||||||||| || ||||||  ||| ||||||||||||||| ||  ||||| |||| | |||||    
T  14663341 cactgtaaacacaatatccaccaccgcccatcgtcactactcacccgcaaagaaca-tcctcaaaataaaactcccaaaccccaacatccaagccgagcc 14663243  T
Q  369 acatttc 375  Q
    |||||||    
T  14663242 acatttc 14663236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 483 - 536
Target Start/End: Complemental strand, 21266163 - 21266110
Alignment:
Q  483 actcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatca 536  Q
    |||||||||||||||||||||| |||||||||||||  |||||| |||||||||    
T  21266163 actcccgatctcgaatcaaaagcgatcggcccaccagtctttaggaccaaatca 21266110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 474 - 570
Target Start/End: Original strand, 33968635 - 33968731
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 570  Q
    ||||| ||||||||||||||||||||||||| ||||  ||||| | |||  | ||||||||||| ||| |||||| | ||| |||| ||||||||||    
T  33968635 aaagaactgactcccgatctcgaatcaaaagcgatctacccactagactacataaccaaatcagaaggccaccccataccctcggttcaccagagaa 33968731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 321 - 439
Target Start/End: Original strand, 3880469 - 3880587
Alignment:
Q  321 aacaccccttaaaataaaactcccagacttcaacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcga 420  Q
    ||||||||| ||||| ||||||| || ||| |||||| || |||||||||||   |||||||| || ||||| ||  |  || ||||||| ||| |||||    
T  3880469 aacacccctcaaaattaaactccaagtcttgaacaccaaagctgagccacatccaaaaagctcatatccgaaagattattcaacttccaccaccactcga 3880568  T
Q  421 ccaccgatccaccgaaaga 439  Q
    || ||||||||| ||||||    
T  3880569 cctccgatccacggaaaga 3880587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 480 - 518
Target Start/End: Complemental strand, 34090416 - 34090378
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccacca 518  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  34090416 ctgactcccgatctcgaatcaaaattgatcgacccacca 34090378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 517
Target Start/End: Complemental strand, 13423535 - 13423482
Alignment:
Q  464 aacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccacc 517  Q
    ||||| ||| ||||| | ||||| |||||||||||||||||||||||| |||||    
T  13423535 aacttgagccaaagaaccgactctcgatctcgaatcaaaagtgatcggtccacc 13423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 601 - 637
Target Start/End: Complemental strand, 9223972 - 9223936
Alignment:
Q  601 agacatcaactctcgatctcgaagcaaaataaccggc 637  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  9223972 agacaccaactcccgatctcgaagcaaaataaccggc 9223936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 98; Significance: 7e-48; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 336 - 670
Target Start/End: Original strand, 35655 - 35993
Alignment:
Q  336 aaaactcccagacttcaacacccaaactgagccacatttcaaa-agctcctaaccgaatgaacaagcagcttccacaac-ctctcgaccaccgatccacc 433  Q
    |||||||||| ||  |||||||||| ||||||| |||||| || ||| |||||||||  || || ||||||  |||||  |||  |||| ||||||||||    
T  35655 aaaactcccacaccccaacacccaagctgagcctcatttcgaagagcacctaaccgatggatcatgcagctatcacaaatctcgtgacctccgatccacc 35754  T
Q  434 gaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaa 533  Q
    |||||||||||| | ||| | | |||||||||||| ||  |||||  |||||||||||||||||||||||||||||||||||| | ||| || |||||||    
T  35755 gaaagagcacaacataaa-gcccaaaaaccaacttaagtcaaagaa-tgactcccgatctcgaatcaaaagtgatcggcccactagactatataaccaaa 35852  T
Q  534 tcagcagggcaccccttgcccccggtacaccagagaacaac--atatcaagtcaaacata-attccaactagacatcaactctcgatctcgaagcaaaat 630  Q
    | |||  ||||||||| |||||||||||||||||||| |||  | || |||||||||| | ||| ||||||||| || |||| |||||||||||| ||||    
T  35853 ttagctaggcacccctcgcccccggtacaccagagaaaaaccaaaattaagtcaaacaaagattgcaactagacctcgactcccgatctcgaagccaaat 35952  T
Q  631 -aaccggctcactggaaaccagcacacaatatgtaagacga 670  Q
     ||||||| ||| | || |||||||||||||||||||||||    
T  35953 gaaccggcccaccgaaagccagcacacaatatgtaagacga 35993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 352 - 658
Target Start/End: Complemental strand, 36888 - 36580
Alignment:
Q  352 aacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaa 451  Q
    |||||| || |||||||||| |  ||||||||||||||||| || ||  || ||||||| || |||||||| ||||||||||||||||   || ||  ||    
T  36888 aacaccaaagctgagccacaatcgaaaagctcctaaccgaaagaccattcaacttccaccacatctcgacctccgatccaccgaaagaaatcataa--aa 36791  T
Q  452 aggctaaaaaccaac--ttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccct 549  Q
    || | |||| | ||   || ||  ||||| |||||||||||||||||||||||||||||| |||| ||| ||||||| |||||||||| |||||||||||    
T  36790 agaccaaaaccaaaaagttgagacaaagaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaatcagaagggcacccct 36691  T
Q  550 tgcccccggtacaccagag-aacaacatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaa 647  Q
      | | ||||||||||||| |||| || |||| | |||||| |||| || ||||||| | ||||  ||||||||| ||||| ||| |||| ||| |||||    
T  36690 cactctcggtacaccagagaaacaccaaatcacgccaaacaaaattgcagctagacaccgactcctgatctcgaatcaaaattaatcggcccaccggaaa 36591  T
Q  648 ccagcacacaa 658  Q
    ||| |||||||    
T  36590 ccaacacacaa 36580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 66; Significance: 8e-29; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 401 - 549
Target Start/End: Complemental strand, 19513 - 19367
Alignment:
Q  401 cagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatca 500  Q
    |||||||||| | ||||||||| ||||||||||||||||   || ||  |||| | |||| | ||||| ||| ||||| |||||| ||||||||||||||    
T  19513 cagcttccaccaactctcgacctccgatccaccgaaagaaaccataa--aaagcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatca 19416  T
Q  501 aaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccct 549  Q
    |||||||||||||||||| ||||||| |||||||||| |||||||||||    
T  19415 aaagtgatcggcccaccagactttaggaccaaatcagaagggcacccct 19367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 352 - 658
Target Start/End: Complemental strand, 58306 - 58000
Alignment:
Q  352 aacacccaaactgagccacatttcaaaagctcctaaccgaatgaacaagcagcttccacaacctctcgaccaccgatccaccgaaagagcacaaaacaaa 451  Q
    |||||| || ||||||||||||  |||||||| || ||||| ||  |  |||||||||  | ||||||||| ||||||||||||||||   || ||  ||    
T  58306 aacaccaaagctgagccacattcgaaaagctcttatccgaaagataattcagcttccatcatctctcgacctccgatccaccgaaagaaaccataa--aa 58209  T
Q  452 aggctaaaaaccaacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttg 551  Q
    || |||||| | ||||| | | ||| |  ||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| | ||||||||         
T  58208 agcctaaaaccaaacttgatccaaacaattgacttccgatcttgaatcaaaagtgatcggcccaccaaactttaggaccaaatctgaagggcaccataca 58109  T
Q  552 cccccggtacaccagag-aacaacatatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaacc 649  Q
    |||  |||||||||||| |||| || |||| | ||||||  ||| || ||||||| | |||| |||||||||||||||| ||||||||  | |||||| |    
T  58108 ccctaggtacaccagagaaacaccaaatcacgccaaacaagattgcagctagacaacgactcccgatctcgaagcaaaagtaaccggcctaatggaaatc 58009  T
Q  650 agcacacaa 658  Q
    |||||||||    
T  58008 agcacacaa 58000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 273 - 491
Target Start/End: Complemental strand, 5966 - 5747
Alignment:
Q  273 gtaaacacggtatccacaaccacccatcgccactactcacccccatagaacaccccttaaaataaaactcccagacttcaacacccaaactgagccacat 372  Q
    ||||||| ||||||||| ||| ||||||  |||||||||||| || | ||||||| | |||||||||||||||||   |||||||||| |||||||||||    
T  5966 gtaaacatggtatccaccacctcccatcatcactactcacccacaaaaaacaccc-tcaaaataaaactcccagatcccaacacccaagctgagccacat 5868  T
Q  373 ttcaaa-agctcctaaccgaatgaacaagcagcttccacaa-cctctcgaccaccgatccaccgaaagagcacaaaacaaaaggctaaaaaccaacttca 470  Q
    | | || ||| |||||||||| || |||| ||||  ||||| |||  ||||| |||||| |||||||||||||||||  |||| | |||||||||| | |    
T  5867 tacgaagagcacctaaccgaaggatcaagtagctatcacaaaccttgcgacctccgatctaccgaaagagcacaaaaacaaagcccaaaaaccaacctga 5768  T
Q  471 gcaaaagagctgactcccgat 491  Q
    |  ||||| ||||||||||||    
T  5767 gtcaaagaactgactcccgat 5747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 474 - 668
Target Start/End: Original strand, 1039 - 1234
Alignment:
Q  474 aaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaa 573  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||| |||| |  |||||||||| |||| ||||||    ||| || ||||||||||  |    
T  1039 aaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg-acccctcattcccagtccaccagagaaaca 1137  T
Q  574 c--atatcaagtcaaacataattccaactagacatcaactctcgatctcgaagcaaaa-taaccggctcactggaaaccagcacacaatatgtaagac 668  Q
    |  | ||||| |||||||  ||| || ||||||| |||||| | |||||||||||||| ||| |||| |||| ||| |||||||||||||||||||||    
T  1138 ccaaaatcaa-tcaaacaagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccactagaatccagcacacaatatgtaagac 1234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 549
Target Start/End: Original strand, 42150 - 42235
Alignment:
Q  464 aacttcagcaaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatcagcagggcacccct 549  Q
    ||||| ||| ||||| |||||| |||||||||||||||||||||||||||||||| ||||||| || ||||||| |||||||||||    
T  42150 aacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccct 42235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 536
Target Start/End: Complemental strand, 3883 - 3827
Alignment:
Q  480 ctgactcccgatctcgaatcaaaagtgatcggcccaccaaactttagaaccaaatca 536  Q
    |||||||||||||||||||||||| |||||||||||||| ||| || || |||||||    
T  3883 ctgactcccgatctcgaatcaaaattgatcggcccaccagactctaaaaacaaatca 3827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University