View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5689-Insertion-7 (Length: 342)

Name: NF5689-Insertion-7
Description: NF5689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5689-Insertion-7
NF5689-Insertion-7
[»] chr1 (7 HSPs)
chr1 (28-342)||(46239096-46239410)
chr1 (31-193)||(28622872-28623033)
chr1 (209-244)||(52267926-52267961)
chr1 (31-191)||(37346973-37347132)
chr1 (279-342)||(37346158-37346221)
chr1 (284-341)||(35508725-35508782)
chr1 (28-64)||(19910038-19910074)
[»] chr7 (9 HSPs)
chr7 (32-306)||(34183113-34183386)
chr7 (32-306)||(34203702-34203975)
chr7 (44-244)||(31804702-31804903)
chr7 (139-306)||(25102900-25103065)
chr7 (128-312)||(15524521-15524712)
chr7 (31-123)||(18503106-18503199)
chr7 (204-283)||(3480595-3480674)
chr7 (142-193)||(17508676-17508727)
chr7 (142-193)||(17544487-17544538)
[»] chr8 (5 HSPs)
chr8 (42-341)||(511701-511998)
chr8 (31-156)||(16456537-16456661)
chr8 (31-193)||(40953270-40953431)
chr8 (204-342)||(8490825-8490964)
chr8 (285-342)||(40953534-40953591)
[»] chr5 (7 HSPs)
chr5 (28-283)||(8095905-8096156)
chr5 (33-331)||(39351320-39351620)
chr5 (139-244)||(12657933-12658038)
chr5 (28-184)||(7883743-7883898)
chr5 (31-71)||(5868351-5868391)
chr5 (279-331)||(33007808-33007860)
chr5 (31-123)||(33134128-33134219)
[»] chr3 (6 HSPs)
chr3 (139-342)||(43462773-43462978)
chr3 (126-282)||(46663338-46663498)
chr3 (43-194)||(21153348-21153498)
chr3 (210-341)||(41864791-41864919)
chr3 (279-342)||(40700826-40700889)
chr3 (261-324)||(44762451-44762512)
[»] chr4 (10 HSPs)
chr4 (186-323)||(3319924-3320061)
chr4 (37-193)||(34513713-34513868)
chr4 (279-342)||(37910464-37910527)
chr4 (139-197)||(3319849-3319907)
chr4 (132-193)||(11138740-11138801)
chr4 (148-193)||(17702285-17702330)
chr4 (293-342)||(45498974-45499023)
chr4 (172-216)||(54103163-54103207)
chr4 (42-193)||(5787260-5787410)
chr4 (279-341)||(34514142-34514204)
[»] chr2 (3 HSPs)
chr2 (173-244)||(12603952-12604023)
chr2 (142-193)||(13996112-13996163)
chr2 (37-93)||(27338768-27338824)
[»] chr6 (3 HSPs)
chr6 (280-342)||(32329639-32329701)
chr6 (279-342)||(12255411-12255474)
chr6 (258-342)||(12267591-12267674)
[»] scaffold0702 (1 HSPs)
scaffold0702 (139-204)||(3922-3987)
[»] scaffold0662 (1 HSPs)
scaffold0662 (139-204)||(4115-4180)
[»] scaffold0957 (2 HSPs)
scaffold0957 (146-205)||(1587-1646)
scaffold0957 (31-94)||(1697-1760)


Alignment Details
Target: chr1 (Bit Score: 274; Significance: 1e-153; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 28 - 342
Target Start/End: Original strand, 46239096 - 46239410
Alignment:
Q  28 catcaaagagataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttg 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46239096 catcaaagagataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttg 46239195  T
Q  128 acatgattaagaattcattccttatttattactatgatattcttccgtttttaaaatgttgtcattccttacttatttatgattaattacatgccgtttt 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46239196 acatgattaagaattcattccttatttattactatgatattcttccgtttttaaaatgttgtcattccttacttatttatgattaattacatgccatttt 46239295  T
Q  228 taaaatatttaattaatgatgagnnnnnnnttctcatttaattataatataataattatatcatctttgttatcatgtgtgtatctaacatatgatatga 327  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||    
T  46239296 taaaatatttaattaatgatgagaaaaaaaatctcatttaattataatataataattatatcctctttattatcatgtgtgtatcgaacatatgatatga 46239395  T
Q  328 ttaacgtttatcatg 342  Q
    |||||||||||||||    
T  46239396 ttaacgtttatcatg 46239410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 193
Target Start/End: Complemental strand, 28623033 - 28622872
Alignment:
Q  31 caaagagataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttgaca 130  Q
    ||||| ||||| ||||||||||| |||||||||| ||||||||| ||   ||||||||||||||   |||||||| ||||||||| |||||||  |||      
T  28623033 caaagggatagaataaaataaactatttttctatcctatcctgactttcctttgtaatttttat-cctgagtataagctgtgttagaaattatcctgatg 28622935  T
Q  131 tgattaagaattcattccttatttattactatgatattcttccgtttttaaaatgttgtcatt 193  Q
     |||||  |  |||||||||||||||||   ||||||||| |  |||||||||| ||||||||    
T  28622934 agattagaagatcattccttatttattatcttgatattctgcgatttttaaaatattgtcatt 28622872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 244
Target Start/End: Original strand, 52267926 - 52267961
Alignment:
Q  209 attaattacatgccgtttttaaaatatttaattaat 244  Q
    ||||||||||||||||||||||||||||||||||||    
T  52267926 attaattacatgccgtttttaaaatatttaattaat 52267961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 191
Target Start/End: Complemental strand, 37347132 - 37346973
Alignment:
Q  31 caaagagataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttgaca 130  Q
    ||||| |||| |||||||||||| |||||||||| ||||||||||||   |||||||||| |||   |||||||| | || |||| |||||||  |||      
T  37347132 caaagggatatgataaaataaaccatttttctatcctatcctgattttcctttgtaatttctat-cctgagtatacgatgggttagaaattatcatgatg 37347034  T
Q  131 tgattaagaattcattccttatttattactatgatattcttccgtttttaaaatgttgtca 191  Q
     |||||  |  |||||||||||||||||   ||||||||| || |||| ||||| ||||||    
T  37347033 ggattagaagatcattccttatttattatcctgatattctgccattttaaaaatattgtca 37346973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 37346221 - 37346158
Alignment:
Q  279 ataattatatcatctttgttatcatgtgtgtatctaacatatgatatgattaacgtttatcatg 342  Q
    ||||| ||||||| |||||||||||||| | ||| |||| |||||| |||||| ||||||||||    
T  37346221 ataatgatatcatgtttgttatcatgtgcgcatcaaacacatgataggattaatgtttatcatg 37346158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 35508782 - 35508725
Alignment:
Q  284 tatatcatctttgttatcatgtgtgtatctaacatatgatatgattaacgtttatcat 341  Q
    |||||||| |||||| |||| |||| ||| |||| ||||||||||||| |||||||||    
T  35508782 tatatcatgtttgttgtcatatgtgcatcaaacacatgatatgattaatgtttatcat 35508725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 19910038 - 19910074
Alignment:
Q  28 catcaaagagataggataaaataaacaatttttctat 64  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  19910038 catcaaagagataagataaaataaaccatttttctat 19910074  T

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Target: chr7 (Bit Score: 106; Significance: 5e-53; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 32 - 306
Target Start/End: Original strand, 34183113 - 34183386
Alignment:
Q  32 aaagagataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttgacat 131  Q
    |||||||||||||||||||||| |||||||||| ||||||||| |||  ||| ||||||||||  | ||||||| |||  ||   ||||||   ||||||    
T  34183113 aaagagataggataaaataaactatttttctatcctatcctgacttgcctttataatttttatccg-gagtataagcttagtataaaattaccctgacat 34183211  T
Q  132 gattaagaattcattccttatttattactatgatattcttccgtttttaaaatgttgtcattccttacttatttatgattaattacatgccgtttttaaa 231  Q
     ||||  ||||||||||||| ||||||| |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||| | ||||||    
T  34183212 tattacaaattcattccttacttattaccatgatattcttccgtttttaaaatgttgtctttacttacttatttataattaattacatgccatatttaaa 34183311  T
Q  232 atatttaattaatgatgagnnnnnnnttctcatttaattataatataataattatatcatctttgttatcatgtg 306  Q
    ||||||||||||  | |||       ||||| ||||||||||||| |||||| ||||| | ||||||||||||||    
T  34183312 atatttaattaactacgagagtaattttctcgtttaattataataaaataatgatatcctatttgttatcatgtg 34183386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 32 - 306
Target Start/End: Original strand, 34203702 - 34203975
Alignment:
Q  32 aaagagataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttgacat 131  Q
    |||||||||||||||||||||| |||||||||| ||||||||| |||  ||| ||||||||||  | ||||||| |||  ||   ||||||   ||||||    
T  34203702 aaagagataggataaaataaactatttttctatcctatcctgacttgcctttataatttttatccg-gagtataagcttagtataaaattaccctgacat 34203800  T
Q  132 gattaagaattcattccttatttattactatgatattcttccgtttttaaaatgttgtcattccttacttatttatgattaattacatgccgtttttaaa 231  Q
     ||||  ||||||||||||| ||||||| |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||| | ||||||    
T  34203801 tattacaaattcattccttacttattaccatgatattcttccgtttttaaaatgttgtctttacttacttatttataattaattacatgccatatttaaa 34203900  T
Q  232 atatttaattaatgatgagnnnnnnnttctcatttaattataatataataattatatcatctttgttatcatgtg 306  Q
    ||||||||||||  | |||       ||||| ||||||||||||| |||||| ||||| | ||||||||||||||    
T  34203901 atatttaattaactacgagagtaattttctcgtttaattataataaaataatgatatcctatttgttatcatgtg 34203975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 244
Target Start/End: Complemental strand, 31804903 - 31804702
Alignment:
Q  44 taaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttgacatgattaagaattc 143  Q
    |||||||||| |||||  ||| ||||||||| |||| ||| |||||||||| | ||||||||  ||| |||| ||  |||| |||||||||||  |||||    
T  31804903 taaaataaaccattttcttatcctatcctgaattgtctttataatttttatct-tgagtataaactgcgttaaaatctattatgacatgattagaaattc 31804805  T
Q  144 attccttatttattactatgatattcttccgtttttaaaatgt--tgtcattccttacttatttatgattaattacatgccgtttttaaaatatttaatt 241  Q
    |||||||||||||||   ||||||| |  | ||||||||||||  ||||||| ||||||||||||| |||||||||||    || |||||||||||||||    
T  31804804 attccttatttattatcctgatattatgtcatttttaaaatgttgtgtcatttcttacttatttataattaattacatatttttcttaaaatatttaatt 31804705  T
Q  242 aat 244  Q
    |||    
T  31804704 aat 31804702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 139 - 306
Target Start/End: Original strand, 25102900 - 25103065
Alignment:
Q  139 aattcattccttatttattactatgatattcttccgtttttaaaatgttgtcattccttacttatttatgattaattacatgccgtttttaaaatattta 238  Q
    ||||||||| ||||||||||  |||||||||| || ||||||||||  |||  ||||||||||||| || ||||||||||||   |||||  |||||||     
T  25102900 aattcattctttatttattatcatgatattctcccatttttaaaatagtgttgttccttacttattaataattaattacatg--ttttttttaatatttt 25102997  T
Q  239 attaatgatgagnnnnnnnttctcatttaattataatataataattatatcatctttgttatcatgtg 306  Q
    ||| || |||||       || |||||||||||||||| |||||| ||||  | ||||||||||||||    
T  25102998 attgattatgagagtaattttttcatttaattataataaaataatgatattctatttgttatcatgtg 25103065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 312
Target Start/End: Original strand, 15524521 - 15524712
Alignment:
Q  128 acatgattaagaatt-cattccttatttattactatgatattcttccgtttttaaaatgttgtcattccttacttattta---tgattaattacatgccg 223  Q
    |||||||||| |||| || |||||||||||||| ||  |||||||||| ||||| |||||||| ||| | ||||||||||   | |||||||||||| |     
T  15524521 acatgattaaaaatttcactccttatttattaccatagtattcttccgcttttataatgttgtgatttcatacttatttatactaattaattacatgtca 15524620  T
Q  224 tttttaaaatatttaattaatgatgagnnnnnnnttctcattt---aattataatataataattatatcatctttgttatcatgtgtgtatc 312  Q
    ||| ||||||||||||| ||| | |||       |||||||||   ||||| |||| |||||| ||||| | ||||||||| ||||||||||    
T  15524621 tttgtaaaatatttaataaattacgagagtaattttctcatttaaaaattaaaataaaataatgatatcctatttgttatcctgtgtgtatc 15524712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 18503199 - 18503106
Alignment:
Q  31 caaagagataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgag--tataggctgtgttataaattat 123  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||||   |||||||||| ||| | ||||  |||||||||||||| |||||||    
T  18503199 caaagagataggataaaataaaccattttcctatcctatcctgattttcatttgtaatttctatct-tgagtatataggctgtgttagaaattat 18503106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 3480674 - 3480595
Alignment:
Q  204 ttatgattaattacatgccgtttttaaaatatttaattaatgatgagnnnnnnnttctcatttaattataatataataat 283  Q
    |||| |||||||||||| | ||||||||||||||||| ||| |||||       || |||||||||||||||||||||||    
T  3480674 ttataattaattacatgtcatttttaaaatatttaatcaattatgagagtacttttttcatttaattataatataataat 3480595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 17508727 - 17508676
Alignment:
Q  142 tcattccttatttattactatgatattcttccgtttttaaaatgttgtcatt 193  Q
    |||||||||||||||||  ||||| |||| || |||||||||||||||||||    
T  17508727 tcattccttatttattatcatgatgttctgccatttttaaaatgttgtcatt 17508676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 17544487 - 17544538
Alignment:
Q  142 tcattccttatttattactatgatattcttccgtttttaaaatgttgtcatt 193  Q
    |||||||||||||||||  ||||| |||| || |||||||||||||||||||    
T  17544487 tcattccttatttattatcatgatgttctgccatttttaaaatgttgtcatt 17544538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 341
Target Start/End: Original strand, 511701 - 511998
Alignment:
Q  42 gataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttgacatgattaagaat 141  Q
    ||||||| |||| ||||||||||  |||| | | |||| |||||||||||||||||  |||||| |||| |||| | | |||  |||||||||||  |||    
T  511701 gataaaacaaaccatttttctatcatatcatcacttgtctttgtaatttttatatg--agtatatgctgggttagatactatcatgacatgattagaaat 511798  T
Q  142 tcattccttatttattactat-gatattcttccgtttttaaaatgttgtcattccttacttatttatgattaattacatgccgtttttaaaatatttaat 240  Q
    | |||||| || |||||| |  |||||| |  |  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  511799 ttattcctcatatattaccaaagatattatgtcaattttaaaatgttgtcattccttacttatttataattaattacatgccgtttttaaaatatttaat 511898  T
Q  241 taatgatgagnnnnnnnttctcatttaattataatataataattatatcatctttgttatcatgtgtgtatctaacatatgatatgattaacgtttatca 340  Q
    |||| | ||        |||||||||| |||||| | |||||| ||||| | |||| ||||||||| | ||| |||| |||||| |||||| ||||||||    
T  511899 taattacgaaagtaagtttctcatttagttataa-aaaataatgatatcttatttggtatcatgtgcgaatcaaacacatgataagattaatgtttatca 511997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 16456537 - 16456661
Alignment:
Q  31 caaagagataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttgaca 130  Q
    |||||||||| |||||||||||| |||||| ||| ||||||||||||| |||||||||| |||| | |||||||| |||  |||| ||||||| |||| |    
T  16456537 caaagagataagataaaataaactatttttttatcctatcctgatttgcttttgtaattcttatct-tgagtataagctacgttagaaattatcttgata 16456635  T
Q  131 tgattaagaattcattccttatttat 156  Q
     |||||| |||  ||| |||||||||    
T  16456636 ggattaaaaatatatttcttatttat 16456661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 193
Target Start/End: Original strand, 40953270 - 40953431
Alignment:
Q  31 caaagagataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttgaca 130  Q
    |||||||||| ||| |||||||  ||||||||||  |||||||| ||   ||||||||||||||   ||||||||||||| |||| |||||||| | |      
T  40953270 caaagagatatgatgaaataaatcatttttctatcatatcctgactttcctttgtaatttttatcc-tgagtataggctgggttagaaattattataatg 40953368  T
Q  131 tgattaagaattcattccttatttattactatgatattcttccgtttttaaaatgttgtcatt 193  Q
     |||||  |  ||||||||||||||||||  ||||||||| || |||||||||| ||||||||    
T  40953369 ggattagaagatcattccttatttattaccttgatattctgccctttttaaaatattgtcatt 40953431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 342
Target Start/End: Complemental strand, 8490964 - 8490825
Alignment:
Q  204 ttatgattaattacatgccgtttttaaaatatttaattaatgatgagnnnnnnnttctc-atttaattataatataataattatatcatctttgttatca 302  Q
    |||| |||||||||||| | |||||| |||||||||||||| |||||       || |  ||||||||||||||  ||||| ||||||| ||||||||      
T  8490964 ttataattaattacatgtcatttttataatatttaattaattatgagagtaaatttttttatttaattataataagataatgatatcatgtttgttatgt 8490865  T
Q  303 tgtgtgtatctaacatatgatatgattaacgtttatcatg 342  Q
    |||||| ||| |||| ||||||  ||||| ||||||||||    
T  8490864 tgtgtgcatcaaacacatgataatattaatgtttatcatg 8490825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 40953534 - 40953591
Alignment:
Q  285 atatcatctttgttatcatgtgtgtatctaacatatgatatgattaacgtttatcatg 342  Q
    ||||||| |||||||||||||| | ||| |||| ||||||||||||| ||||||||||    
T  40953534 atatcatgtttgttatcatgtgcgcatcaaacacatgatatgattaatgtttatcatg 40953591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 28 - 283
Target Start/End: Original strand, 8095905 - 8096156
Alignment:
Q  28 catcaaagagataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttg 127  Q
    |||||||||||||| ||||||||||  |||||||||||||||||| | || | ||||||||||||||   ||| |||| | || |||| ||| ||| |||    
T  8095905 catcaaagagatagaataaaataaattatttttctattctatcctaacttatatttgtaatttttatcc-tgaatatatgttgagttagaaactatcttg 8096003  T
Q  128 acatgattaagaattcattccttatttattactatgatattcttccgtttttaaaatgttgtcattccttacttatttatgattaattacatgccgtttt 227  Q
    | | |||||| |||||||||  |||||||||  || ||||| |  ||||||||   ||||||||||| |||||||||||| |||||||||||| ||||||    
T  8096004 ataagattaaaaattcattctatatttattatcatcatattatgtcgttttta---tgttgtcattctttacttatttataattaattacatgtcgtttt 8096100  T
Q  228 taaaatatttaattaatgatgagnnnnnnnttctcatttaattataatataataat 283  Q
    ||||||||||||||||| | |||       ||||||||||||||| ||| ||||||    
T  8096101 taaaatatttaattaataacgagagtaattttctcatttaattatgataaaataat 8096156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 331
Target Start/End: Original strand, 39351320 - 39351620
Alignment:
Q  33 aagagataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttgacatg 132  Q
    ||||||||| ||||||||||  |||||  |||  ||| || | |||| ||||||| ||||||   ||||| |||| || ||||||||||||  |||||||    
T  39351320 aagagatagaataaaataaatcattttcatatcatatactaacttgtctttgtaaattttatcc-tgagtgtaggttgggttataaattatcctgacatg 39351418  T
Q  133 attaagaattcattccttatttattactatgatattcttccgtttttaaaatgttgtcattccttactta---tttatgattaattacatgccgttttta 229  Q
    ||||| |||| ||| ||||||| |||| ||| |||| |  | |  ||||||||||||||||  |||||||   ||||| ||||||||| |||| ||||||    
T  39351419 attaaaaatttatttcttatttgttaccatggtattatgtcataattaaaatgttgtcatttgttacttactatttataattaattacgtgccattttta 39351518  T
Q  230 aaatatttaattaatgatgagnnnnnnnttctcatttaattataatataataattatatcatctttgttatcatgtgtgtatctaacatatgatatgatt 329  Q
    ||||||||||||||| |  ||       ||||||||||||||||||| |||||| ||||||| |||||||||||||| | ||| |||| |||||||||||    
T  39351519 aaatatttaattaattacaagaataattttctcatttaattataataaaataatgatatcatatttgttatcatgtgcgcatcaaacacatgatatgatt 39351618  T
Q  330 aa 331  Q
    ||    
T  39351619 aa 39351620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 12657933 - 12658038
Alignment:
Q  139 aattcattccttatttattactatgatattcttccgtttttaaaatgttgtcattccttacttatttatgattaattacatgccgtttttaaaatattta 238  Q
    |||||||| |||||||||||| ||| ||||||| ||||||| |||||||||||||| ||| |||||||| |||||||||||| |||||||||||| ||||    
T  12657933 aattcatttcttatttattacaatggtattctttcgtttttcaaatgttgtcattctttatttatttataattaattacatgtcgtttttaaaatgttta 12658032  T
Q  239 attaat 244  Q
    ||||||    
T  12658033 attaat 12658038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 7883898 - 7883743
Alignment:
Q  28 catcaaagagataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttg 127  Q
    |||||||| ||||||||||||||||| ||||| |||| |||| |||| ||   |||||||||| ||| | |||||||||||||  ||| |||||||  ||    
T  7883898 catcaaagggataggataaaataaaccattttcctatcctattctgaatttcctttgtaatttctat-tctgagtataggctggattagaaattatcctg 7883800  T
Q  128 acatgattaagaattcattccttatttattactatgatattcttccgtttttaaaat 184  Q
    |   |||||  |  |||||||||||||||||   | ||||||| || ||||||||||    
T  7883799 atgggattagaagatcattccttatttattatctttatattctgccatttttaaaat 7883743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 5868391 - 5868351
Alignment:
Q  31 caaagagataggataaaataaacaatttttctattctatcc 71  Q
    ||||||||||||||||||||||| ||||| |||| ||||||    
T  5868391 caaagagataggataaaataaaccattttcctatcctatcc 5868351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 33007860 - 33007808
Alignment:
Q  279 ataattatatcatctttgttatcatgtgtgtatctaacatatgatatgattaa 331  Q
    ||||| ||||| | |||||||||||||||| ||| |||| |||||||||||||    
T  33007860 ataatgatatcttgtttgttatcatgtgtgcatcaaacacatgatatgattaa 33007808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 33134128 - 33134219
Alignment:
Q  31 caaagagataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattat 123  Q
    ||||| ||||||||||||||||| ||||| |||| ||||||||| ||   |||||||||| |||   ||||||||||||  |||| |||||||    
T  33134128 caaagggataggataaaataaaccattttcctatcctatcctgactttcctttgtaatttctat-catgagtataggctaggttagaaattat 33134219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 139 - 342
Target Start/End: Complemental strand, 43462978 - 43462773
Alignment:
Q  139 aattcattccttatttattactatgatattcttccgtttttaaaatgttgtcattccttacttatttatgattaattacatgccgtttttaaaatattta 238  Q
    |||| ||||||||||||| |   |||| |||| |||||||||||| | | || |||||||||||||||| |||||||||||| | |||||||||||||||    
T  43462978 aatttattccttatttatcaacgtgatgttctgccgtttttaaaaaggtttctttccttacttatttataattaattacatgtcatttttaaaatattta 43462879  T
Q  239 attaatgatgagnnnnnnnttctcatttaattataatataataattatatcatctttgttatcatgtgtgtatc--taacatatgatatgattaacgttt 336  Q
    |||||| | |||       ||||||||||||||||||| |||||| ||||  | | |||||||||||||| |||   ||||||||||| |||||| ||||    
T  43462878 attaattacgagagtaaatttctcatttaattataataaaataatgatatactatgtgttatcatgtgtgcatcaaaaacatatgatacgattaatgttt 43462779  T
Q  337 atcatg 342  Q
    ||||||    
T  43462778 atcatg 43462773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 282
Target Start/End: Original strand, 46663338 - 46663498
Alignment:
Q  126 tgacatgattaagaattcattccttatttattactatgatattcttccgtttttaaaatgttgtcattccttacttatttatg----attaattacatgc 221  Q
    |||||||||||  |||||||||| |||||||||| |||||||  | || |||||||||| ||||||||||||||||||||||     ||||||||||||     
T  46663338 tgacatgattataaattcattccatatttattaccatgatataataccatttttaaaatattgtcattccttacttatttatttataattaattacatgt 46663437  T
Q  222 cgtttttaaaatatttaattaatgatgagnnnnnnnttctcatttaattataatataataa 282  Q
    | ||||||||||||||||||||| | |||       ||||||||||||||||||| |||||    
T  46663438 catttttaaaatatttaattaattacgagaataattttctcatttaattataataaaataa 46663498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 194
Target Start/End: Complemental strand, 21153498 - 21153348
Alignment:
Q  43 ataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttga-catgattaagaat 141  Q
    |||||||| || ||||||||||  |||||||| ||| ||| |||| ||||||   ||||||||||||| |||| ||||||| |||| ||| ||||| |||    
T  21153498 ataaaatagaccatttttctatcatatcctgacttgctttcgtaacttttatcc-tgagtataggctgagttagaaattatcttgatcataattaaaaat 21153400  T
Q  142 tcattccttatttattactatgatattcttccgtttttaaaatgttgtcattc 194  Q
    ||||||||| |||||||| ||||||||||  ||||||| ||||||||||||||    
T  21153399 tcattccttgtttattacaatgatattctgtcgttttt-aaatgttgtcattc 21153348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 210 - 341
Target Start/End: Complemental strand, 41864919 - 41864791
Alignment:
Q  210 ttaattacatgccgtttttaaaatatttaattaatgatgagnnnnnnnttctcatttaattataatataataattatatcatctttgttatcatgtgtgt 309  Q
    |||||||||||| |||||||||||||||||| ||||| |||       |||||||||||||||| || |||||| || || | ||||||||||||||||     
T  41864919 ttaattacatgctgtttttaaaatatttaataaatga-gagtaaat--ttctcatttaattatagtaaaataatgatttcttatttgttatcatgtgtgc 41864823  T
Q  310 atctaacatatgatatgattaacgtttatcat 341  Q
    ||| || | |||||| |||||| |||||||||    
T  41864822 atcaaatacatgataagattaatgtttatcat 41864791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 40700889 - 40700826
Alignment:
Q  279 ataattatatcatctttgttatcatgtgtgtatctaacatatgatatgattaacgtttatcatg 342  Q
    ||||| ||||||| |||||||||||||||| ||| |||| |||||| |||||| ||||||||||    
T  40700889 ataatgatatcatgtttgttatcatgtgtgcatcaaacacatgataggattaatgtttatcatg 40700826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 324
Target Start/End: Complemental strand, 44762512 - 44762451
Alignment:
Q  261 tcatttaattataatataataattatatcatctttgttatcatgtgtgtatctaacatatgata 324  Q
    |||||||||| |||||||   || ||||||| |||||||||||||||| ||| |||||||||||    
T  44762512 tcatttaattgtaatatat--ataatatcatgtttgttatcatgtgtgcatcaaacatatgata 44762451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 323
Target Start/End: Original strand, 3319924 - 3320061
Alignment:
Q  186 ttgtcattccttacttatttatgattaattacatgccgtttttaaaatatttaattaatgatgagnnnnnnnttctcatttaattataatataataatta 285  Q
    |||||||||||||||||||| | |||||||||||| | ||||| ||||||||||||||| | |||       | |||||||| ||||| || |||||| |    
T  3319924 ttgtcattccttacttatttctaattaattacatgtctttttttaaatatttaattaattacgagtgtaatttactcatttatttatagtaaaataatga 3320023  T
Q  286 tatcatctttgttatcatgtgtgtatctaacatatgat 323  Q
    |||||| |||||||||||||| |  || ||||||||||    
T  3320024 tatcatatttgttatcatgtgcgcctcaaacatatgat 3320061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 193
Target Start/End: Complemental strand, 34513868 - 34513713
Alignment:
Q  37 gataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttgacatgatta 136  Q
    ||||||||||||||||| ||||||||||  |||||||| ||   |||||||||| |||   |||||||| |||| |||| |||||||  |||   |||||    
T  34513868 gataggataaaataaaccatttttctatcatatcctgactttcctttgtaatttctat-cctgagtataagctgggttagaaattatcctgatgggatta 34513770  T
Q  137 agaattcattccttatttattactatgatattcttccgtttttaaaatgttgtcatt 193  Q
      || ||||| |||||||||||   ||||||||| || |||||||||| ||||||||    
T  34513769 gaaaatcatttcttatttattatcttgatattctgccatttttaaaatattgtcatt 34513713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 37910527 - 37910464
Alignment:
Q  279 ataattatatcatctttgttatcatgtgtgtatctaacatatgatatgattaacgtttatcatg 342  Q
    ||||| ||||| | |||||||||||||||| ||| |||| ||||||||||||| ||||||||||    
T  37910527 ataatgatatcctgtttgttatcatgtgtgcatcaaacacatgatatgattaatgtttatcatg 37910464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 3319849 - 3319907
Alignment:
Q  139 aattcattccttatttattactatgatattcttccgtttttaaaatgttgtcattcctt 197  Q
    |||||||||||||||| | |  ||||||||||  |||||||||||||||||||||||||    
T  3319849 aattcattccttatttttaatcatgatattctgtcgtttttaaaatgttgtcattcctt 3319907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 11138740 - 11138801
Alignment:
Q  132 gattaagaattcattccttatttattactatgatattcttccgtttttaaaatgttgtcatt 193  Q
    |||||| |||||||| ||| |||||||  ||||||||||| | |||||||||||||||||||    
T  11138740 gattaacaattcatttcttgtttattatcatgatattctttcatttttaaaatgttgtcatt 11138801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 17702285 - 17702330
Alignment:
Q  148 cttatttattactatgatattcttccgtttttaaaatgttgtcatt 193  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||    
T  17702285 cttatttattatcatgatattcttccatttttaaaatgttgtcatt 17702330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 342
Target Start/End: Complemental strand, 45499023 - 45498974
Alignment:
Q  293 tttgttatcatgtgtgtatctaacatatgatatgattaacgtttatcatg 342  Q
    |||||||||||||||| ||| |||| ||||||||||||| ||||||||||    
T  45499023 tttgttatcatgtgtgcatcaaacacatgatatgattaatgtttatcatg 45498974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 54103207 - 54103163
Alignment:
Q  172 ccgtttttaaaatgttgtcattccttacttatttatgattaatta 216  Q
    ||||||||||||||||||| |||||||||||||| | ||||||||    
T  54103207 ccgtttttaaaatgttgtccttccttacttatttttaattaatta 54103163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 5787410 - 5787260
Alignment:
Q  42 gataaaataaacaatttttctattctatcctgatttgtttttgtaatttttatatgtgagtataggctgtgttataaattattttgacatgattaagaat 141  Q
    |||||||||||  ||||| |||| ||||| ||||||   |||||||||| ||| |  ||||||| |||| |||| |||||||  |||   |||||| |      
T  5787410 gataaaataaatcattttcctatcctatcatgattttcctttgtaatttctatgtc-gagtatatgctgagttagaaattatcctgatgggattaaaaga 5787312  T
Q  142 tcattccttatttattactatgatattcttccgtttttaaaatgttgtcatt 193  Q
    |||||||||||||||||   ||||||||| || |||||||||| ||||||||    
T  5787311 tcattccttatttattatcttgatattctgccatttttaaaatattgtcatt 5787260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 341
Target Start/End: Original strand, 34514142 - 34514204
Alignment:
Q  279 ataattatatcatctttgttatcatgtgtgtatctaacatatgatatgattaacgtttatcat 341  Q
    ||||| ||||| | |||||||||||||| | ||| ||||||||| |||||||| |||||||||    
T  34514142 ataatgatatcctatttgttatcatgtgcgcatcaaacatatgacatgattaatgtttatcat 34514204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 12604023 - 12603952
Alignment:
Q  173 cgtttttaaaatgttgtcattccttacttatttatgattaattacatgccgtttttaaaatatttaattaat 244  Q
    |||||||||||||||||||||||||| ||||||   ||||| | | ||| ||||||||||||||||||||||    
T  12604023 cgtttttaaaatgttgtcattccttatttattttaaattaaatgcgtgcggtttttaaaatatttaattaat 12603952  T

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Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 13996163 - 13996112
Alignment:
Q  142 tcattccttatttattactatgatattcttccgtttttaaaatgttgtcatt 193  Q
    ||||||||||||||||| | |||||||||||| |||| ||||| ||||||||    
T  13996163 tcattccttatttattattttgatattcttccattttaaaaatattgtcatt 13996112  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 27338768 - 27338824
Alignment:
Q  37 gataggataaaataaacaatttttctattctatcctgatttgtttttgtaattttta 93  Q
    |||| |||||||||||| |||||||||| ||||||||| ||   |||||||||||||    
T  27338768 gatatgataaaataaaccatttttctatcctatcctgactttcctttgtaattttta 27338824  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 32329639 - 32329701
Alignment:
Q  280 taattatatcatctttgttatcatgtgtgtatctaacatatgatatgattaacgtttatcatg 342  Q
    |||| ||||||| |||||||||||||| ||||| |||| ||||||||||||| ||||||||||    
T  32329639 taatgatatcatatttgttatcatgtgcgtatcaaacacatgatatgattaatgtttatcatg 32329701  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 12255411 - 12255474
Alignment:
Q  279 ataattatatcatctttgttatcatgtgtgtatctaacatatgatatgattaacgtttatcatg 342  Q
    ||||| ||||||| |||||||||||||| | ||| |||| |||||| |||||| ||||||||||    
T  12255411 ataatgatatcatgtttgttatcatgtgcgcatcaaacacatgataagattaatgtttatcatg 12255474  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 12267591 - 12267674
Alignment:
Q  258 ttctcatttaattataatataataattatatcatctttgttatcatgtgtgtatctaacatatgatatgattaacgtttatcatg 342  Q
    |||||||||| |||||||| |||||| ||||  | || ||||||||||| | ||| |||| ||||||||||||| | ||||||||    
T  12267591 ttctcatttatttataataaaataatgatatactattagttatcatgtgggcatc-aacacatgatatgattaatgattatcatg 12267674  T

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Target: scaffold0702 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 3987 - 3922
Alignment:
Q  139 aattcattccttatttattactatgatattcttccgtttttaaaatgttgtcattccttacttatt 204  Q
    |||||||||||| |||||||| |||||||| |  |||||||||||| ||||||||| |||||||||    
T  3987 aattcattccttctttattaccatgatattatatcgtttttaaaatattgtcattcattacttatt 3922  T

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Target: scaffold0662 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 4115 - 4180
Alignment:
Q  139 aattcattccttatttattactatgatattcttccgtttttaaaatgttgtcattccttacttatt 204  Q
    |||||||||||| |||||||| |||||||| |  |||||||||||| ||||||||| |||||||||    
T  4115 aattcattccttctttattaccatgatattatatcgtttttaaaatattgtcattcattacttatt 4180  T

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Target: scaffold0957 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 1646 - 1587
Alignment:
Q  146 tccttatttattactatgatattcttccgtttttaaaatgttgtcattccttacttattt 205  Q
    ||||||||| |||| ||  ||||||||||||||||||||||||||||| | |||||||||    
T  1646 tccttattttttaccatagtattcttccgtttttaaaatgttgtcatttcatacttattt 1587  T

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Target: scaffold0957; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 1697 - 1760
Alignment:
Q  31 caaagagataggataaaataaacaatttttctattctatcctgatttgtttttgtaatttttat 94  Q
    |||||||||||||| |||||||  ||||||||||  |||||| | ||| |||||||||||||||    
T  1697 caaagagataggatgaaataaatcatttttctatcttatcctaacttggttttgtaatttttat 1760  T

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