View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5689_high_28 (Length: 373)

Name: NF5689_high_28
Description: NF5689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5689_high_28
NF5689_high_28
[»] chr3 (35 HSPs)
chr3 (20-284)||(50965397-50965675)
chr3 (20-284)||(51068532-51068810)
chr3 (20-105)||(9505182-9505267)
chr3 (19-112)||(39135347-39135440)
chr3 (26-99)||(39469598-39469671)
chr3 (23-112)||(52199426-52199515)
chr3 (19-99)||(39942867-39942947)
chr3 (23-105)||(28242580-28242662)
chr3 (22-104)||(32689165-32689247)
chr3 (22-104)||(41609884-41609966)
chr3 (20-99)||(25253696-25253775)
chr3 (20-99)||(52934806-52934885)
chr3 (20-106)||(54393503-54393589)
chr3 (25-105)||(30662192-30662272)
chr3 (28-96)||(46293283-46293351)
chr3 (20-114)||(18074570-18074664)
chr3 (23-69)||(52199386-52199432)
chr3 (20-139)||(5418672-5418794)
chr3 (25-105)||(12710701-12710781)
chr3 (20-72)||(28687066-28687118)
chr3 (26-98)||(40943561-40943633)
chr3 (301-341)||(50965703-50965743)
chr3 (301-341)||(51068838-51068878)
chr3 (25-99)||(26049607-26049681)
chr3 (20-106)||(33438791-33438877)
chr3 (22-112)||(44574522-44574612)
chr3 (22-99)||(23206375-23206451)
chr3 (21-98)||(31589617-31589694)
chr3 (20-69)||(53529687-53529736)
chr3 (20-112)||(19560828-19560920)
chr3 (20-92)||(28700991-28701063)
chr3 (26-98)||(54432259-54432331)
chr3 (47-105)||(30743593-30743651)
chr3 (26-99)||(20550269-20550342)
chr3 (38-110)||(18652507-18652579)
[»] chr5 (38 HSPs)
chr5 (20-139)||(41783319-41783441)
chr5 (25-105)||(1840748-1840828)
chr5 (20-112)||(3801418-3801510)
chr5 (19-99)||(38522928-38523008)
chr5 (22-104)||(27906094-27906176)
chr5 (20-139)||(14500730-14500852)
chr5 (26-117)||(10493985-10494076)
chr5 (22-104)||(18880188-18880270)
chr5 (20-113)||(26218041-26218134)
chr5 (26-106)||(34723713-34723793)
chr5 (26-105)||(19282175-19282254)
chr5 (20-99)||(20188967-20189046)
chr5 (20-105)||(39414175-39414261)
chr5 (20-113)||(11136060-11136152)
chr5 (36-117)||(34857357-34857438)
chr5 (32-105)||(40056424-40056497)
chr5 (22-106)||(27196073-27196157)
chr5 (26-106)||(39407406-39407486)
chr5 (20-99)||(20190651-20190730)
chr5 (22-69)||(29328040-29328087)
chr5 (25-96)||(31620867-31620938)
chr5 (19-69)||(32157034-32157084)
chr5 (29-106)||(34724814-34724891)
chr5 (19-106)||(15933153-15933243)
chr5 (31-95)||(24536012-24536076)
chr5 (26-106)||(27450641-27450721)
chr5 (20-96)||(31021857-31021933)
chr5 (26-106)||(34719717-34719797)
chr5 (28-106)||(26298313-26298391)
chr5 (26-92)||(39409140-39409206)
chr5 (20-61)||(3457820-3457861)
chr5 (29-106)||(32945081-32945158)
chr5 (19-68)||(43386720-43386769)
chr5 (26-106)||(19716183-19716263)
chr5 (21-99)||(36523746-36523828)
chr5 (21-61)||(1091119-1091159)
chr5 (26-106)||(1225351-1225431)
chr5 (26-106)||(26299847-26299927)
[»] chr4 (61 HSPs)
chr4 (19-99)||(36543774-36543854)
chr4 (20-106)||(6866163-6866249)
chr4 (20-113)||(52706211-52706304)
chr4 (22-104)||(12789614-12789696)
chr4 (22-104)||(21441577-21441659)
chr4 (22-104)||(50606004-50606086)
chr4 (22-104)||(53369868-53369950)
chr4 (20-113)||(7505523-7505616)
chr4 (23-139)||(11055250-11055369)
chr4 (21-114)||(51995073-51995166)
chr4 (19-99)||(9469770-9469850)
chr4 (20-112)||(19455212-19455304)
chr4 (26-105)||(22184503-22184582)
chr4 (20-99)||(32397765-32397844)
chr4 (20-99)||(48339166-48339245)
chr4 (22-104)||(19852974-19853056)
chr4 (20-106)||(36156354-36156440)
chr4 (22-104)||(49820978-49821060)
chr4 (23-105)||(52813598-52813680)
chr4 (26-106)||(1803498-1803578)
chr4 (26-98)||(25134574-25134646)
chr4 (26-114)||(40797830-40797918)
chr4 (22-106)||(44378246-44378330)
chr4 (22-106)||(48977572-48977656)
chr4 (26-105)||(26632936-26633015)
chr4 (22-69)||(53369684-53369731)
chr4 (22-104)||(44791305-44791387)
chr4 (20-118)||(56224139-56224237)
chr4 (37-110)||(5764629-5764702)
chr4 (37-110)||(5766873-5766946)
chr4 (22-99)||(45674831-45674908)
chr4 (26-106)||(80497-80577)
chr4 (30-106)||(15697143-15697219)
chr4 (20-139)||(22721322-22721443)
chr4 (22-106)||(24007963-24008047)
chr4 (21-113)||(28470814-28470906)
chr4 (25-68)||(9959342-9959385)
chr4 (25-68)||(16742423-16742466)
chr4 (26-96)||(48731243-48731313)
chr4 (20-114)||(49083286-49083380)
chr4 (28-106)||(50146978-50147056)
chr4 (21-114)||(13455696-13455789)
chr4 (26-150)||(27891387-27891513)
chr4 (38-110)||(5762601-5762673)
chr4 (38-110)||(5769171-5769243)
chr4 (25-105)||(12673089-12673169)
chr4 (28-96)||(50710840-50710908)
chr4 (25-99)||(48151193-48151267)
chr4 (21-99)||(48802543-48802621)
chr4 (26-99)||(43812124-43812197)
chr4 (25-114)||(46944596-46944685)
chr4 (28-69)||(52733797-52733838)
chr4 (20-68)||(38493075-38493123)
chr4 (26-114)||(49059842-49059930)
chr4 (51-98)||(13761824-13761871)
chr4 (26-113)||(51408002-51408089)
chr4 (25-106)||(49405695-49405776)
chr4 (38-110)||(5728737-5728809)
chr4 (25-69)||(24550076-24550120)
chr4 (28-68)||(41822113-41822153)
chr4 (26-66)||(43387268-43387308)
[»] chr7 (51 HSPs)
chr7 (23-105)||(10618923-10619005)
chr7 (22-104)||(48505850-48505932)
chr7 (19-112)||(7447874-7447967)
chr7 (20-139)||(45055727-45055849)
chr7 (22-104)||(5776192-5776274)
chr7 (22-104)||(5794998-5795080)
chr7 (25-99)||(23227066-23227140)
chr7 (25-99)||(23236219-23236293)
chr7 (22-104)||(37334279-37334361)
chr7 (20-139)||(11595820-11595942)
chr7 (26-105)||(22075068-22075147)
chr7 (23-114)||(33935510-33935601)
chr7 (22-104)||(665909-665991)
chr7 (22-104)||(3930778-3930860)
chr7 (22-104)||(28949820-28949902)
chr7 (22-104)||(42072084-42072166)
chr7 (22-104)||(43052873-43052955)
chr7 (20-139)||(40480074-40480197)
chr7 (26-98)||(26719820-26719892)
chr7 (26-106)||(36472444-36472524)
chr7 (22-114)||(45176246-45176338)
chr7 (22-69)||(15434244-15434291)
chr7 (19-98)||(23237585-23237664)
chr7 (23-105)||(44421962-44422045)
chr7 (22-104)||(26216273-26216355)
chr7 (25-102)||(18740282-18740359)
chr7 (26-106)||(18250053-18250133)
chr7 (28-112)||(33898998-33899082)
chr7 (20-99)||(3942175-3942254)
chr7 (26-69)||(33124700-33124743)
chr7 (23-105)||(222287-222369)
chr7 (28-114)||(32356968-32357054)
chr7 (22-104)||(36927000-36927082)
chr7 (41-114)||(33019321-33019394)
chr7 (36-105)||(48634462-48634531)
chr7 (25-105)||(17025422-17025502)
chr7 (25-105)||(46573673-46573753)
chr7 (26-106)||(49034284-49034364)
chr7 (20-99)||(17608711-17608790)
chr7 (20-99)||(37401633-37401712)
chr7 (25-68)||(41449755-41449798)
chr7 (25-99)||(33171601-33171675)
chr7 (28-69)||(2466614-2466655)
chr7 (25-113)||(20401000-20401088)
chr7 (23-106)||(21760643-21760726)
chr7 (20-99)||(27231606-27231685)
chr7 (44-106)||(28759438-28759500)
chr7 (20-66)||(29527385-29527431)
chr7 (25-74)||(44994056-44994105)
chr7 (19-59)||(23223561-23223601)
chr7 (31-99)||(29037847-29037915)
[»] chr1 (53 HSPs)
chr1 (23-105)||(31869591-31869673)
chr1 (21-114)||(50447336-50447429)
chr1 (22-104)||(24469879-24469961)
chr1 (20-106)||(25124945-25125031)
chr1 (22-104)||(32179854-32179936)
chr1 (20-106)||(35810712-35810798)
chr1 (22-104)||(37441248-37441330)
chr1 (21-99)||(42937069-42937147)
chr1 (22-104)||(47602924-47603006)
chr1 (22-99)||(36419097-36419174)
chr1 (21-106)||(39802827-39802912)
chr1 (20-139)||(19508522-19508644)
chr1 (26-98)||(40159698-40159770)
chr1 (23-114)||(15306490-15306581)
chr1 (25-139)||(23915621-23915738)
chr1 (22-104)||(7702831-7702913)
chr1 (20-113)||(13645233-13645326)
chr1 (26-99)||(42916181-42916254)
chr1 (26-114)||(29677571-29677659)
chr1 (20-99)||(7596387-7596466)
chr1 (20-99)||(46265011-46265090)
chr1 (21-114)||(27076567-27076660)
chr1 (20-113)||(43087519-43087612)
chr1 (24-100)||(23916808-23916884)
chr1 (25-105)||(28006349-28006429)
chr1 (20-92)||(40002888-40002960)
chr1 (20-112)||(45653485-45653577)
chr1 (26-105)||(5204530-5204609)
chr1 (20-105)||(3577664-3577750)
chr1 (21-99)||(14770583-14770661)
chr1 (20-114)||(20349140-20349234)
chr1 (20-117)||(15662943-15663040)
chr1 (36-105)||(44596527-44596596)
chr1 (26-106)||(7995971-7996051)
chr1 (28-131)||(14796590-14796696)
chr1 (28-131)||(14805464-14805570)
chr1 (26-98)||(15257239-15257311)
chr1 (20-92)||(33233624-33233696)
chr1 (20-114)||(45581060-45581154)
chr1 (31-112)||(20347671-20347752)
chr1 (34-115)||(28020600-28020681)
chr1 (21-106)||(29113585-29113669)
chr1 (25-98)||(51432271-51432344)
chr1 (28-99)||(14101864-14101936)
chr1 (46-114)||(21680708-21680776)
chr1 (25-105)||(24575908-24575988)
chr1 (26-106)||(38061238-38061318)
chr1 (25-113)||(48575133-48575221)
chr1 (48-99)||(14578652-14578703)
chr1 (25-106)||(31816567-31816648)
chr1 (26-98)||(7956324-7956396)
chr1 (57-105)||(12224636-12224684)
chr1 (31-99)||(15014320-15014388)
[»] chr8 (16 HSPs)
chr8 (22-104)||(11161568-11161650)
chr8 (23-99)||(3307931-3308007)
chr8 (20-131)||(43967504-43967618)
chr8 (20-99)||(33280044-33280123)
chr8 (22-104)||(453479-453561)
chr8 (20-105)||(9135946-9136031)
chr8 (20-99)||(27189149-27189228)
chr8 (20-74)||(10749311-10749365)
chr8 (26-96)||(23181155-23181225)
chr8 (20-105)||(9412585-9412670)
chr8 (20-99)||(34516132-34516211)
chr8 (28-113)||(28492714-28492790)
chr8 (26-106)||(22564006-22564086)
chr8 (20-139)||(34655029-34655151)
chr8 (24-114)||(1091725-1091815)
chr8 (20-114)||(35058301-35058395)
[»] chr6 (24 HSPs)
chr6 (20-106)||(10961856-10961942)
chr6 (21-106)||(18095514-18095599)
chr6 (20-99)||(9950827-9950906)
chr6 (25-104)||(10346720-10346799)
chr6 (26-112)||(4441355-4441441)
chr6 (21-106)||(18099811-18099896)
chr6 (26-114)||(3081770-3081858)
chr6 (20-68)||(12428881-12428929)
chr6 (26-98)||(13312022-13312094)
chr6 (20-139)||(33110452-33110574)
chr6 (20-99)||(5640319-5640398)
chr6 (35-105)||(1501857-1501927)
chr6 (26-107)||(7437304-7437385)
chr6 (20-132)||(22295910-22296025)
chr6 (26-114)||(6999267-6999355)
chr6 (24-95)||(32163539-32163610)
chr6 (22-67)||(8200638-8200683)
chr6 (25-69)||(11460103-11460147)
chr6 (30-69)||(13355722-13355761)
chr6 (26-99)||(27984957-27985030)
chr6 (25-68)||(21298912-21298955)
chr6 (19-140)||(9463377-9463501)
chr6 (35-72)||(2962796-2962833)
chr6 (36-113)||(17441168-17441245)
[»] chr2 (27 HSPs)
chr2 (23-105)||(3409249-3409331)
chr2 (22-104)||(26436350-26436432)
chr2 (20-113)||(2647027-2647120)
chr2 (20-99)||(34116240-34116319)
chr2 (26-117)||(40458921-40459012)
chr2 (22-104)||(27634667-27634749)
chr2 (22-96)||(33831491-33831565)
chr2 (22-104)||(34064701-34064783)
chr2 (23-105)||(44740544-44740626)
chr2 (28-105)||(24844727-24844804)
chr2 (20-99)||(2578073-2578152)
chr2 (20-99)||(11027902-11027981)
chr2 (28-118)||(14103269-14103359)
chr2 (22-104)||(36538652-36538734)
chr2 (26-106)||(11007032-11007112)
chr2 (20-99)||(30713150-30713229)
chr2 (30-104)||(41959147-41959221)
chr2 (25-105)||(9963758-9963838)
chr2 (36-104)||(33164042-33164110)
chr2 (28-96)||(38409641-38409709)
chr2 (20-68)||(40680215-40680263)
chr2 (31-101)||(10196868-10196938)
chr2 (20-69)||(39690164-39690213)
chr2 (25-73)||(41332230-41332278)
chr2 (25-96)||(1094456-1094527)
chr2 (20-74)||(10412434-10412488)
chr2 (36-73)||(16544016-16544053)
[»] scaffold0316 (1 HSPs)
scaffold0316 (22-99)||(19292-19369)
[»] scaffold0204 (1 HSPs)
scaffold0204 (20-99)||(26688-26767)
[»] scaffold0224 (1 HSPs)
scaffold0224 (26-99)||(7375-7448)
[»] scaffold0444 (1 HSPs)
scaffold0444 (22-106)||(827-911)
[»] scaffold0954 (1 HSPs)
scaffold0954 (19-98)||(252-331)
[»] scaffold0260 (2 HSPs)
scaffold0260 (20-114)||(11463-11557)
scaffold0260 (31-112)||(9994-10075)
[»] scaffold0171 (1 HSPs)
scaffold0171 (22-106)||(21084-21167)
[»] scaffold0022 (1 HSPs)
scaffold0022 (19-99)||(124548-124628)
[»] scaffold0025 (1 HSPs)
scaffold0025 (20-61)||(11384-11425)
[»] scaffold0192 (1 HSPs)
scaffold0192 (26-106)||(25626-25705)
[»] scaffold0002 (1 HSPs)
scaffold0002 (25-61)||(96279-96315)


Alignment Details
Target: chr3 (Bit Score: 166; Significance: 9e-89; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 20 - 284
Target Start/End: Original strand, 50965397 - 50965675
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaatttt-cagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattgag 118  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||| |||||||||||| |||||||||||||||||||||    
T  50965397 tatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaaatttaacgaactaattattgag 50965496  T
Q  119 agttccgaactttagtcgagtaaattcgattcgttgcgaaccttaatg-------------tgagagctccataatttttcgtctttagaccattctcag 205  Q
    ||||||||||||||||||||| |||||  ||| |||||| ||||||||             |||||||||||||||||||||||||||||||||||||||    
T  50965497 agttccgaactttagtcgagttaattcagttcattgcgagccttaatgtatacattaatattgagagctccataatttttcgtctttagaccattctcag 50965596  T
Q  206 agttccataannnnnnngcgtacaagacaaagaactccatatttgatttatccattaaaaaagggaaccgaagtgtcca 284  Q
    ||||||||||       |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50965597 agttccataatttttttgcgtacaagacagagaactccatatttgatttatccattaaaaaagggaaccgaagtgtcca 50965675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 20 - 284
Target Start/End: Original strand, 51068532 - 51068810
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaatttt-cagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattgag 118  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||| |||||||||||| |||||||||||||||||||||    
T  51068532 tatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaaatttaacgaactaattattgag 51068631  T
Q  119 agttccgaactttagtcgagtaaattcgattcgttgcgaaccttaatg-------------tgagagctccataatttttcgtctttagaccattctcag 205  Q
    ||||||||||||||||||||| |||||  ||| |||||| ||||||||             |||||||||||||||||||||||||||||||||||||||    
T  51068632 agttccgaactttagtcgagttaattcagttcattgcgagccttaatgtatacattaatattgagagctccataatttttcgtctttagaccattctcag 51068731  T
Q  206 agttccataannnnnnngcgtacaagacaaagaactccatatttgatttatccattaaaaaagggaaccgaagtgtcca 284  Q
    ||||||||||       |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  51068732 agttccataatttttttgcgtacaagacagagaactccatatttgatttatccattaaaaaagggaaccgaagtgtcca 51068810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 9505267 - 9505182
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||  || ||| | ||||||||||||||| |||||    
T  9505267 tatatctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcaactcatttggttcatgaaccaagttcaacga 9505182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 39135347 - 39135440
Alignment:
Q  19 ctatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatt 112  Q
    |||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||| ||| | ||||||||||||||| || |||| ||||    
T  39135347 ctatagtttaagttcagctcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaatt 39135440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 39469671 - 39469598
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  39469671 tcaagtttagctcatttaattaacgaacttaattttcagctcaagttcggctcatttgattcatgaaccaagtt 39469598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 52199426 - 52199515
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||  || | ||||||||||||||| |||||| |||||    
T  52199426 agctcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaatt 52199515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 39942947 - 39942867
Alignment:
Q  19 ctatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||| ||| ||| ||||  |||||||||||||||    
T  39942947 ctataactcaagttcagctcatctatttaacgaacttaattttcagctcaagttcagctcattaagttcatgaaccaagtt 39942867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 28242580 - 28242662
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||| ||| ||| | |||||||||||| || |||||    
T  28242580 agctcaagttcagatcatttatttaacgaatttaattttcagctcaaattcagctcatttggttcatgaaccaaattcaacga 28242662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 32689165 - 32689247
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  32689165 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 32689247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 41609884 - 41609966
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  41609884 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 41609966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 25253696 - 25253775
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||| |||||| ||||||||||||||||||||||||||| ||||||| ||| ||| ||| | |||||||||||||||    
T  25253696 tatagcttaagttcggctcatttatttaacgaacttaatttttagctcaagttcagctcatttggttcatgaaccaagtt 25253775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 52934806 - 52934885
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||| |||||||| |||||||||||||||||||||||||||| |||||| ||| ||| ||| | |||||||||||||||    
T  52934806 tatagatcaagttcggctcatttatttaacgaacttaattttctgctcaagttcagctcatttggttcatgaaccaagtt 52934885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 54393589 - 54393503
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||| |||||||| ||||| |||||| |||||||||||||||||||||| ||||||| ||| | || |||||||||||| ||||||    
T  54393589 tatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggtttatgaaccaagttcaacgaa 54393503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 30662272 - 30662192
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||  |||||||||||||||| ||||||||||| ||||| |||| || ||| ||||||||||||||||| |||||    
T  30662272 ctcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacga 30662192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 46293351 - 46293283
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaa 96  Q
    ||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||| | ||||||||||||    
T  46293351 aagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaa 46293283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 18074570 - 18074664
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||  || |||   |||||||| ||| || |||||| |||||||    
T  18074570 tatagctcaatttcagctcatttagttaacgaacttaattttcagttcaaattcaactcatttagttcatgaaacaaattcaacgaattaattat 18074664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 52199386 - 52199432
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaacttaattttcagctcaa 69  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  52199386 agctcaagttcagctcatttgtttaacgaacttaattttcagctcaa 52199432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 5418672 - 5418794
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga-- 117  Q
    |||| |||||||||| |||||||| |||||||||||||| || ||||||| |||| ||  || | ||||||||| ||||| ||| ||||||||| | |      
T  5418672 tataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaactaattacttagt 5418771  T
Q  118 -gagttccgaactttagtcgagt 139  Q
     ||||||||||||||| ||||||    
T  5418772 cgagttccgaactttattcgagt 5418794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 12710701 - 12710781
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||  |||||||||||||||| ||||||||||| ||||| |||| || ||| | ||||||||||||||| |||||    
T  12710701 ctcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacga 12710781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 28687066 - 28687118
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaatt 72  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  28687066 tatagcttaagttgagctcgtttatttaacgaacttaattttcagctcaaatt 28687118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 40943561 - 40943633
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagt 98  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||| |||| || ||| | ||||||||||||||    
T  40943561 tcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagt 40943633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 50965703 - 50965743
Alignment:
Q  301 gaaacaggttcatattagatgtatgcatcaatattgaatct 341  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  50965703 gaaacaggttcatattagatgtatgcatcaatattgaatct 50965743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 51068838 - 51068878
Alignment:
Q  301 gaaacaggttcatattagatgtatgcatcaatattgaatct 341  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  51068838 gaaacaggttcatattagatgtatgcatcaatattgaatct 51068878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 26049681 - 26049607
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||  || ||||||||||||| ||||||||||| ||||| |||| || ||| |||||||||||||||||    
T  26049681 ctcaagttcgactaatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagtt 26049607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 33438877 - 33438791
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||| |||| || |||||| ||| || |||||||||||||||||||||| |||| || ||| | ||||||||||||||| ||||||    
T  33438877 tatagttcaactttagctcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcaacgaa 33438791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 44574522 - 44574612
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatt 112  Q
    |||||||||||| ||||||||| | ||||||||| ||||| | ||||| ||| ||| ||||| |||| |||| ||||| |||||| |||||    
T  44574522 tagctcaagttcggctcatttaataaacgaacttgatttttaactcaagttcagctcattaggttcacgaactaagttcaacgaattaatt 44574612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 23206451 - 23206375
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||| |||||||||||||||| |||| |||||||||||||||||||| | | |||  |||| ||||||||| |||||    
T  23206451 tagcttaagttcagctcatttaattaa-gaacttaattttcagctcaagtccagctcgttaggttcatgaacaaagtt 23206375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 31589617 - 31589694
Alignment:
Q  21 atagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagt 98  Q
    |||||||||||||| | | |||||||||| ||||||||||||| ||||| || | |||||| | || |||||||||||    
T  31589617 atagctcaagttcaacccgtttatttaacaaacttaattttcaactcaagtttgacttatttggtttatgaaccaagt 31589694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 53529736 - 53529687
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaa 69  Q
    ||||| |||||||||||||| ||| || ||||||||||||||||||||||    
T  53529736 tatagttcaagttcagctcaattagttgacgaacttaattttcagctcaa 53529687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 19560920 - 19560828
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatt 112  Q
    |||| ||||||||| |||||||||||||||| |||||| | | | ||||| ||| |||| ||   ||||||||||||||| |||||| |||||    
T  19560920 tataactcaagttcggctcatttatttaacggacttaactcttaactcaagttcagcttgtttcgttcatgaaccaagttcaacgaattaatt 19560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 28700991 - 28701063
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaa 92  Q
    |||| |||||||||| ||||||| ||||||||| ||||||||||| |||| |||  |||||| | ||||||||    
T  28700991 tataactcaagttcaactcatttttttaacgaatttaattttcagttcaacttcaacttatttggttcatgaa 28701063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 54432331 - 54432259
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagt 98  Q
    ||||||||| |||||||||||||||| ||||||||| | ||||| |||| || |||   ||||||||||||||    
T  54432331 tcaagttcaactcatttatttaacgagcttaatttttaactcaagttcgactcatttagttcatgaaccaagt 54432259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 30743593 - 30743651
Alignment:
Q  47 aacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    ||||||||||||| ||| ||||||||| ||| ||| | ||||||||||||||| |||||    
T  30743593 aacgaacttaattctcaactcaaattcagctcatttggttcatgaaccaagttcaacga 30743651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 20550342 - 20550269
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||| || ||||||||||||||||| |||||||||| ||||  |||| || ||| | ||| |||||||||||    
T  20550342 tcaagtacaactcatttatttaacgaatttaattttcaactcatgttcgactcatttggttcgtgaaccaagtt 20550269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 18652579 - 18652507
Alignment:
Q  38 catttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaa 110  Q
    ||||||||||||||| |||||||| |||||||| ||  || ||| | ||||| |||||||||  |||||||||    
T  18652579 catttatttaacgaatttaatttttagctcaaactcaactcatttggttcattaaccaagttcgacgaactaa 18652507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 41783319 - 41783441
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga-- 117  Q
    |||| |||||||||| |||||||| |||||||||||||| || ||||||| ||||||| ||| | ||||||||||||||| |||||||||||||  ||      
T  41783319 tataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcatttggttcatgaaccaagttcaacgaactaattaccgagt 41783418  T
Q  118 -gagttccgaactttagtcgagt 139  Q
     ||||||||||||||| ||||||    
T  41783419 cgagttccgaactttattcgagt 41783441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 1840828 - 1840748
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||| ||| ||| | ||||||||||||||| |||||    
T  1840828 ctcaagttcagctcatttatttcacgaacttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacga 1840748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 3801510 - 3801418
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatt 112  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||| | ||||||||||||||| || |||| ||||    
T  3801510 tatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaatt 3801418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 38523008 - 38522928
Alignment:
Q  19 ctatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||| || |||| ||| | |||||||||||||||    
T  38523008 ctatagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagtt 38522928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 27906094 - 27906176
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  27906094 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 27906176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 14500852 - 14500730
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga-- 117  Q
    |||| |||||||||| |||||| | |||||||||||||| || ||||||| |||||||  || | ||||||||||||||| |||||||||||||| ||      
T  14500852 tataactcaagttcaactcattcagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattatcgagt 14500753  T
Q  118 -gagttccgaactttagtcgagt 139  Q
     |||||||||||| || ||||||    
T  14500752 cgagttccgaactgtattcgagt 14500730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 10493985 - 10494076
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga 117  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| |||| || ||| | ||  ||||||||||| ||||||| |||||||||    
T  10493985 tcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtttgtgaaccaagttcaacgaaccaattattga 10494076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 18880188 - 18880270
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || | | |||  |||| ||||||||||||||| ||||    
T  18880188 tagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaacg 18880270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 26218041 - 26218134
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatta 113  Q
    |||| |||||||| | |||||||| |||||||||||||| || ||||||| |||||||  || | ||||||||||||||| |||||||||||||    
T  26218041 tataactcaagtttaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaatta 26218134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 34723793 - 34723713
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||| |||||||||||||||| ||||||||| | |||||||||| || ||||| |||||||| |||||| ||||||    
T  34723793 tcaagttcaactcatttatttaacgagcttaattttaaactcaaattcgactcattaggttcatgaatcaagttcaacgaa 34723713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 19282254 - 19282175
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    ||||||||||||||| || ||||||||| ||||||||||||||| ||| ||| ||| | ||||||||||||||| |||||    
T  19282254 tcaagttcagctcatctacttaacgaacctaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacga 19282175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 20188967 - 20189046
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||||||||||||| ||| || |||||||||||||| || |||| ||||||| ||| | |||||||||||||||    
T  20188967 tatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagtt 20189046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 39414175 - 39414261
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaa-ttcggcttattagattcatgaaccaagtttaacga 105  Q
    |||| ||||||||||||||||||||||||||||||||||||| | || ||| ||| ||| ||||| |||||| |||||||| |||||    
T  39414175 tataactcaagttcagctcatttatttaacgaacttaatttttaacttaaagttcagctcattaggttcatggaccaagttcaacga 39414261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 11136152 - 11136060
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatta 113  Q
    |||| |||||||||| |||||||| |||||||||||||| || ||||||| |||||||  || | ||| ||||||||||| |||||||||||||    
T  11136152 tataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagttcaacgaactaatta 11136060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 34857357 - 34857438
Alignment:
Q  36 ctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga 117  Q
    |||||||||||||||| ||||||||| | ||||| |||| || |||||||||||||| |||||| ||||||  |||||||||    
T  34857357 ctcatttatttaacgagcttaattttaaactcaagttcgactcattagattcatgaatcaagttcaacgaatcaattattga 34857438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 40056497 - 40056424
Alignment:
Q  32 tcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||||||||||||||||||||||||| ||||||||   |||||| | |||||||||||| || |||||    
T  40056497 tcagctcatttatttaacgaacttaattttcatctcaaatttaacttatttggttcatgaaccaaattcaacga 40056424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 27196073 - 27196157
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||||||| ||| ||||| |||||| ||||||||||| ||||| |||| || ||| | |||||||||||| |||||||||    
T  27196073 tagctcaagttcaactcctttatctaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaatttaacgaa 27196157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 39407406 - 39407486
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||| |||||||||||||||| ||||||||| | ||||| |||| || ||||| |||||||| |||||| ||||||    
T  39407406 tcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaa 39407486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 20190730 - 20190651
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||||||||||||| |||   | ||||||||||||| ||||||| ||||||| ||| | |||||||||||||||    
T  20190730 tatagctcaagttcagctcaattaggcagcgaacttaattttgagctcaagttcggctcatttggttcatgaaccaagtt 20190651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 29328040 - 29328087
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaa 69  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  29328040 tagctcaagttaagctcatttaattaacgaacttaattttcagctcaa 29328087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 31620867 - 31620938
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaa 96  Q
    ||||||||||||||||||| |||||||||||||| ||||||| || |||  || ||||| ||||||||||||    
T  31620867 ctcaagttcagctcatttaattaacgaacttaatattcagctgaagttcaactcattaggttcatgaaccaa 31620938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 32157084 - 32157034
Alignment:
Q  19 ctatagctcaagttcagctcatttatttaacgaacttaattttcagctcaa 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  32157084 ctatagttcaagttcagctcatttaattaacgaacttaattttcaactcaa 32157034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 34724891 - 34724814
Alignment:
Q  29 agttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||| |||||||||||||||| ||||||||| | ||||| |||| || ||||| |||||||| |||||| ||||||    
T  34724891 agttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaa 34724814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 15933153 - 15933243
Alignment:
Q  19 ctatagctcaagttcagctcatttatttaacgaacttaa---ttttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||||||||| |||||||||||||||||||||||   | || ||||||  |||  || ||||| ||||||||||||||| ||||||    
T  15933153 ctatagctcaagttcggctcatttatttaacgaacttaatagtatttagctcatgttcaactcattaggttcatgaaccaagttcaacgaa 15933243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 24536012 - 24536076
Alignment:
Q  31 ttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaacca 95  Q
    |||| ||| |||||||||||||||||||||| ||||||||||  ||| ||| |||||||||||||    
T  24536012 ttcaactcgtttatttaacgaacttaattttgagctcaaatttagctcatttgattcatgaacca 24536076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 27450721 - 27450641
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||| |||||||||||||||| ||||||||| | ||||| |||| || ||||| |||||||| ||| || ||||||    
T  27450721 tcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaaattcaacgaa 27450641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 31021857 - 31021933
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaa 96  Q
    ||||||| || ||||||||||||| ||||| ||||||||||  ||||||||||| ||| ||| | ||||||||||||    
T  31021857 tatagcttaaattcagctcatttagttaacaaacttaatttcaagctcaaattcagctcatttggttcatgaaccaa 31021933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 34719797 - 34719717
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||| |||||||||||||||| ||||||||| | ||||| |||| || ||||  |||||||| |||||| ||||||    
T  34719797 tcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaagttcatgaatcaagttcaacgaa 34719717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 26298313 - 26298391
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||| |||||||||||||||| ||||||||| | ||||| || | || ||||| |||||||| |||||| ||||||    
T  26298313 aagttcaactcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatcaagttcaacgaa 26298391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 39409140 - 39409206
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaa 92  Q
    ||||||||| |||||||||||||||| ||||||||| | ||||| |||| || ||||| ||||||||    
T  39409140 tcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaa 39409206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 3457820 - 3457861
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaatttt 61  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  3457820 tatagctcaagtccaactcatttatttaacgaacttaatttt 3457861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 32945158 - 32945081
Alignment:
Q  29 agttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||| |||||||||||| |||| |||||||||   ||||| |||| || ||| | ||||||||||||||||||||||    
T  32945158 agttcggctcatttatttgacgagcttaatttttgactcaagttcgactcatttggttcatgaaccaagtttaacgaa 32945081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 43386720 - 43386769
Alignment:
Q  19 ctatagctcaagttcagctcatttatttaacgaacttaattttcagctca 68  Q
    ||||| ||||||||||  |||||||||||| |||||||||||||||||||    
T  43386720 ctataactcaagttcaattcatttatttaaagaacttaattttcagctca 43386769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 19716183 - 19716263
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||||  ||||||||||||||| ||||||||| | || || |||| || ||||| |||||||| |||||| ||||||    
T  19716183 tcaagttcaattcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcatgaatcaagttcaacgaa 19716263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 36523746 - 36523828
Alignment:
Q  21 atagctcaagttcagctcatttatttaac----gaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||||||||||||||||||||||     ||||||||||| |  |||| |||| || ||| | |||||||||||||||    
T  36523746 atagctcaagttcagctcatttatttaacaaattaacttaatttttaaatcaagttcgactcatttggttcatgaaccaagtt 36523828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 1091119 - 1091159
Alignment:
Q  21 atagctcaagttcagctcatttatttaacgaacttaatttt 61  Q
    |||||||||||||| ||||||||||||| ||||||| ||||    
T  1091119 atagctcaagttcaactcatttatttaatgaacttattttt 1091159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 1225351 - 1225431
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||| | |||||||||| |||| ||||||||||| ||||| |||| || ||| | ||||| ||| ||||| ||||||    
T  1225351 tcaagttcggttcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcataaactaagttcaacgaa 1225431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 26299847 - 26299927
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||||  ||||||||||||||| ||||||||| | ||||| || | || ||||| ||||||||  ||||| ||||||    
T  26299847 tcaagttcaattcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatgaagttcaacgaa 26299927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 36543774 - 36543854
Alignment:
Q  19 ctatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||| || |||||||| | |||||||||||||||    
T  36543774 ctatagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggcttatttggttcatgaaccaagtt 36543854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 6866249 - 6866163
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||||||||||||||| ||| || |||||||||||||||||||||| ||||||| ||| | |||||||||||||||| |||||    
T  6866249 tatagctcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtttgacgaa 6866163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 52706211 - 52706304
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatta 113  Q
    |||| |||||||||| |||||||| |||||||||||||| || ||||||| |||||||  || | |||||||||||||||||||||||||||||    
T  52706211 tataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtttaacgaactaatta 52706304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 12789696 - 12789614
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||  |||| ||||| ||||||||| ||||    
T  12789696 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagttcagctcgttaggttcataaaccaagttcaacg 12789614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 21441577 - 21441659
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  21441577 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 21441659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 50606004 - 50606086
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  50606004 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 50606086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 53369868 - 53369950
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  53369868 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 53369950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 7505523 - 7505616
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatta 113  Q
    |||| |||||||||| |||||||| |||||||| |||||||| ||||||| ||||||| ||| | |||||||| |||||| |||||||||||||    
T  7505523 tataactcaagttcaactcatttagttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaacgaactaatta 7505616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 11055369 - 11055250
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga---ga 119  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||| ||| ||| | ||||||||||||||| || ||  ||||||| ||   ||    
T  11055369 agctcaagttcggctcatttatttaacgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcga 11055270  T
Q  120 gttccgaactttagtcgagt 139  Q
    |||||||||| | |||||||    
T  11055269 gttccgaactattgtcgagt 11055250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 51995073 - 51995166
Alignment:
Q  21 atagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    |||| ||||||||| ||| |||||||||| ||||||||||| ||||||| ||||||| ||| | ||||||||||||||| |||||| |||||||    
T  51995073 atagttcaagttcaactcgtttatttaacaaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcaacgaattaattat 51995166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 9469770 - 9469850
Alignment:
Q  19 ctatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||| |||||||||||||||||| | ||||||||||||||||||||||| || |||| ||| | |||||||||||||||    
T  9469770 ctatagttcaagttcagctcatttaatcaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagtt 9469850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 19455304 - 19455212
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatt 112  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||| ||||| ||| ||| ||| ||||||||||||||||| |||||| |||||    
T  19455304 tatagctcaagttcaactcatttagataacaaacttaattttcaactcaagttcagctcatttgattcatgaaccaagttcaacgaattaatt 19455212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 22184503 - 22184582
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||| |||  || | ||||||||||||||| |||||    
T  22184503 tcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacga 22184582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 32397844 - 32397765
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||| |||||||||||||| ||| || |||||||||||||| || |||| ||||||||||| |||||||||||||||||    
T  32397844 tatagttcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggcttatttgattcatgaaccaagtt 32397765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 48339245 - 48339166
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||| |||||||||||| ||| || |||||||||||||||||||||| |||| || ||| |||||||||||||||||    
T  48339245 tatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagtt 48339166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 19852974 - 19853056
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | |  ||  |||| ||||||||||||||| ||||    
T  19852974 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgttaggttcatgaaccaagttcaacg 19853056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 36156440 - 36156354
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||| |||||||||||||| ||| || |||||||||||||||||||||| ||||||| ||| | |||| |||||||||| ||||||    
T  36156440 tatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcaagaaccaagttcaacgaa 36156354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 49820978 - 49821060
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || | | |||  |||| ||||||||||||||| ||||    
T  49820978 tagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaacg 49821060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 52813598 - 52813680
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||||||||||||| ||||||||||||||||||||||| || ||| |||  || | ||||||||||||||| |||||    
T  52813598 agctcaagttcagctcatttgtttaacgaacttaattttcagcttaagttcagctcgtttggttcatgaaccaagttcaacga 52813680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 1803498 - 1803578
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||| |||||||||||||||| ||||||||| | ||||| |||| || ||||| |||||||| |||||||||||||    
T  1803498 tcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagtttaacgaa 1803578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 25134574 - 25134646
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagt 98  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||| || ||| | ||||||||||||||    
T  25134574 tcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagt 25134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 40797830 - 40797918
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||| |||| || ||| | ||||||||||||||| || |||| ||||||    
T  40797830 tcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaatgaaccaattat 40797918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 44378246 - 44378330
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||||||| |||||||||||||||| ||||||||||| | |||||||  || ||| | ||||||||||||||| ||||||    
T  44378246 tagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaacgaa 44378330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 48977572 - 48977656
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||  | | ||| ||||| ||||||||| ||||| ||||||    
T  48977572 tagctcaagttcagctcatttaattaacgaatttaattttcagctcatgtccagctcattaggttcatgaacgaagttcaacgaa 48977656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 26632936 - 26633015
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||| | || |||| ||||||| |||||    
T  26632936 tcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttaatgagccaagttcaacga 26633015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 53369684 - 53369731
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaa 69  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  53369684 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaa 53369731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 44791387 - 44791305
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||| | | |||  |||| ||||||||||||||| ||||    
T  44791387 tagctcaaattcagctcatttaattaacgaacttaattttcagttcaagtgcagctcgttaggttcatgaaccaagttcaacg 44791305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 56224139 - 56224237
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattgag 118  Q
    ||||| ||||||||| || ||||| |||||||| |||||||||||||||| ||||||| ||| | || || ||||||||| |||||| ||||| |||||    
T  56224139 tatagttcaagttcaacttatttaattaacgaatttaattttcagctcaagttcggctcatttggtttattaaccaagttcaacgaattaattgttgag 56224237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 5764702 - 5764629
Alignment:
Q  37 tcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaa 110  Q
    |||||||||||||||| ||||||||||||||||| ||  |||||| | |||||||||||||||  |||||||||    
T  5764702 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaagttcgacgaactaa 5764629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 5766946 - 5766873
Alignment:
Q  37 tcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaa 110  Q
    |||||||||||||||| ||||||||||||||||| ||  |||||| | |||||||||||||||  |||||||||    
T  5766946 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaagttcgacgaactaa 5766873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 45674831 - 45674908
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||| | | |||  |||| |||||||||||||||    
T  45674831 tagctcaagttcaactcatttaattaacgaatttaattttcagctcaagtccagctcgttaggttcatgaaccaagtt 45674908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 80497 - 80577
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||| |||||||||||| |||| ||||||||||| ||||| |||| || ||| | ||||||||||||||| ||||||    
T  80497 tcaagttcggctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaa 80577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 15697219 - 15697143
Alignment:
Q  30 gttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||||||| | ||||||||||||||||| ||||||| ||| ||||||| | |||||||| |||||| ||||||    
T  15697219 gttcagctcattaagttaacgaacttaatttttagctcaagttcagcttatttggttcatgaatcaagttcaacgaa 15697143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 22721322 - 22721443
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga-- 117  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||| || || | ||  || | ||||||||||||||| || ||||||||||  ||      
T  22721322 tataactcaagttcaactcatttatttaacgaacttaatttt-agcttaagtttgcctcgtttggttcatgaaccaagttcaatgaactaattaccgaat 22721420  T
Q  118 -gagttccgaactttagtcgagt 139  Q
     ||||||||||||||| ||||||    
T  22721421 cgagttccgaactttattcgagt 22721443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 24008047 - 24007963
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||| ||   ||  |||| ||||||||||||||| ||||||    
T  24008047 tagctcaagttcaactcatttatttaacgaacttaattttaaactcaagtttaactcgttaggttcatgaaccaagttcaacgaa 24007963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 28470814 - 28470906
Alignment:
Q  21 atagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatta 113  Q
    |||||||||||||||||||||||||||| ||| ||||||| ||| ||| | | | || ||| | ||||||||||||||| |||||| ||||||    
T  28470814 atagctcaagttcagctcatttatttaatgaaattaatttacagttcacaattgactcatttggttcatgaaccaagttcaacgaattaatta 28470906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 9959342 - 9959385
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctca 68  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  9959342 ctcaagttcagcttatttatttaacgaacttaattttcagctca 9959385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 16742466 - 16742423
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctca 68  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  16742466 ctcaagttcagctcatttatttaacgaacttaattttcaactca 16742423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 48731313 - 48731243
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaa 96  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||| ||| | ||||| | ||||||||||||    
T  48731313 tcaagtacagctcatttaattaacgaacttaatttttagctcaagttcagtttatttggttcatgaaccaa 48731243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 49083380 - 49083286
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    |||| ||||||| ||||||||||| |||||||| ||||||||||| |||| |||  || ||||| || |||||||||||| |||  |||||||||    
T  49083380 tataactcaagtacagctcatttaattaacgaatttaattttcagatcaagttcaactcattaggtttatgaaccaagttcaacagactaattat 49083286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 50147056 - 50146978
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||||||| ||| || |||||||||||||||||||||| | ||| | ||| | ||||||||||||||| ||||||    
T  50147056 aagttcagctcaattagttcacgaacttaattttcagctcaagtccggttcatttggttcatgaaccaagttcaacgaa 50146978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 13455696 - 13455789
Alignment:
Q  21 atagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    |||| ||||||||| ||| |||||||||||||||||||||| ||||||| || | || ||| | ||||| || |||||| |||||| |||||||    
T  13455696 atagttcaagttcaactcgtttatttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaacgaattaattat 13455789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 27891387 - 27891513
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga---gagtt 122  Q
    |||| ||||||||||||||||||| || || ||||||||||||| ||| ||| ||| | ||||||||||||||| |||||  ||||| | ||   |||||    
T  27891387 tcaaattcagctcatttatttaacaaatttgattttcagctcaagttcagctcatttg-ttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 27891485  T
Q  123 ccgaactttagtcgagtaaattcgattc 150  Q
    ||||||| | |||||||  |||||||||    
T  27891486 ccgaactattgtcgagttgattcgattc 27891513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 5762673 - 5762601
Alignment:
Q  38 catttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaa 110  Q
    ||||||||||||||| ||||||||||||||||| ||  || ||| | |||||||||||||||  |||||||||    
T  5762673 catttatttaacgaatttaattttcagctcaaactcaactcatttggttcatgaaccaagttcgacgaactaa 5762601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 5769243 - 5769171
Alignment:
Q  38 catttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaa 110  Q
    ||||||||||||||| ||||||||||||||||||||  |  ||| | |||||||||||||||  |||||||||    
T  5769243 catttatttaacgaatttaattttcagctcaaattcaacccatttggttcatgaaccaagttcgacgaactaa 5769171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 12673169 - 12673089
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||  ||||||||||||| || ||||||||||| ||||| |||| || ||| | ||||||||||||||| |||||    
T  12673169 ctcaagttcgactcatttatttaatgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacga 12673089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 50710908 - 50710840
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaa 96  Q
    ||||||| || ||||||||||||| ||||||||||| ||||| |||| || ||| ||||||||||||||    
T  50710908 aagttcaacttatttatttaacgagcttaattttcaactcaatttcgactcatttgattcatgaaccaa 50710840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 48151267 - 48151193
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||  || ||||||||||||||||||||||||||||||| ||| ||| ||| | ||  |||||||||||    
T  48151267 ctcaagttcgacttatttatttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaaccaagtt 48151193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 48802621 - 48802543
Alignment:
Q  21 atagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||||||||| |||||||||||| |||| ||||||||||  ||||| |||| || ||| | |||||||| ||||||    
T  48802621 atagctcaagttcggctcatttatttgacgagcttaattttcgactcaagttcgactcatttggttcatgaatcaagtt 48802543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 43812197 - 43812124
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||||||| ||| || ||||||||||||||||| | || ||||||  ||| | |||||||||||||||    
T  43812197 tcaagttcagctcaattagtttacgaacttaattttcagtttaagttcggcccatttggttcatgaaccaagtt 43812124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 46944685 - 46944596
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    |||||||||  || ||||||||||||| ||||| ||||| ||||| |||| || ||| | ||||||||||||||| ||||| | ||||||    
T  46944685 ctcaagttcgacttatttatttaacgagcttaaatttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagccaattat 46944596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 52733838 - 52733797
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctcaa 69  Q
    ||||||| || |||||||||||||||||||||||||||||||    
T  52733838 aagttcaacttatttatttaacgaacttaattttcagctcaa 52733797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 38493123 - 38493075
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctca 68  Q
    |||| |||||||||| |||||||| ||||| ||||||||||||||||||    
T  38493123 tataactcaagttcaactcatttaattaacaaacttaattttcagctca 38493075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 49059930 - 49059842
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    |||||||||| ||| ||| |||| ||||||||||||||||| ||||||  |||||| | ||||||||  || ||||| ||| |||||||    
T  49059930 tcaagttcagttcacttagttaatgaacttaattttcagctaaaattcaacttatttggttcatgaattaaatttaatgaattaattat 49059842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 13761824 - 13761871
Alignment:
Q  51 aacttaattttcagctcaaattcggcttattagattcatgaaccaagt 98  Q
    ||||||||||||||||||||||| ||| ||| | ||||||||||||||    
T  13761824 aacttaattttcagctcaaattcagctcatttggttcatgaaccaagt 13761871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 51408089 - 51408002
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatta 113  Q
    ||||||||| ||||||| ||| |||||||||||||| | | ||  |||| || ||| | ||||||||||||||| |||||| ||||||    
T  51408089 tcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcatttggttcatgaaccaagttgaacgaattaatta 51408002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 49405776 - 49405695
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||| |||||||||||| |||| ||||||||||   |||| |||| || ||| | ||||| ||||||||| ||||||    
T  49405776 ctcaagttcggctcatttatttgacgagcttaattttcgattcaagttcgactcatttggttcataaaccaagttcaacgaa 49405695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 5728809 - 5728737
Alignment:
Q  38 catttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaa 110  Q
    ||||||||||||||| |||||||| |||||||| ||  || ||| | ||||| |||||||||  |||||||||    
T  5728809 catttatttaacgaatttaatttttagctcaaactcaactcatttggttcattaaccaagttcgacgaactaa 5728737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 24550076 - 24550120
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaa 69  Q
    |||||||||| |||||||| ||||| ||||||||||| |||||||    
T  24550076 ctcaagttcaactcatttagttaacaaacttaatttttagctcaa 24550120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 41822113 - 41822153
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctca 68  Q
    |||||||||||||||| ||||| ||||||||||||| ||||    
T  41822113 aagttcagctcatttagttaacaaacttaattttcaactca 41822153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 43387268 - 43387308
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagct 66  Q
    ||||||||||||||||| ||||||| | |||||||||||||    
T  43387268 tcaagttcagctcatttgtttaacggatttaattttcagct 43387308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 10618923 - 10619005
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||   ||||||||||||||| |||||    
T  10618923 agctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttagttcatgaaccaagttcaacga 10619005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 48505932 - 48505850
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | ||| ||||| ||||||||||||||| ||||    
T  48505932 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggttcatgaaccaagttcaacg 48505850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 7447874 - 7447967
Alignment:
Q  19 ctatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatt 112  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||| | ||||||||||||||| || |||| ||||    
T  7447874 ctatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaatt 7447967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 45055727 - 45055849
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga-- 117  Q
    |||| |||||||||| |||||||| |||||||||||||| || ||||||| |||||||  || | ||||||||||||||| |||||||||||||  ||      
T  45055727 tataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagt 45055826  T
Q  118 -gagttccgaactttagtcgagt 139  Q
     ||||||||||||||| ||||||    
T  45055827 cgagttccgaactttattcgagt 45055849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 5776274 - 5776192
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  5776274 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 5776192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 5795080 - 5794998
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  5795080 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 5794998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 23227140 - 23227066
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||||||||    
T  23227140 ctcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagtt 23227066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 23236293 - 23236219
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||| ||||||||    
T  23236293 ctcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagtt 23236219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 37334279 - 37334361
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  37334279 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 37334361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 11595942 - 11595820
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga-- 117  Q
    |||| |||||| ||| |||||||| |||||||||||||| || ||||||| |||||||  || | ||||||||||||||| |||||||||||||  ||      
T  11595942 tataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagt 11595843  T
Q  118 -gagttccgaactttagtcgagt 139  Q
     ||||||||||||||| ||||||    
T  11595842 cgagttccgaactttattcgagt 11595820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 22075068 - 22075147
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||| | ||| ||||||| ||| |||||    
T  22075068 tcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttcgtgaaccacgttcaacga 22075147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 33935510 - 33935601
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||  || | ||||||||||||||| |||||  |||||||    
T  33935510 agctcaagttcatctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattat 33935601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 665991 - 665909
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| | | |||  |||| |||||||||||| |||||||    
T  665991 tagctcaaattcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaatttaacg 665909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 3930860 - 3930778
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| |||||| |||||||| ||||    
T  3930860 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatggaccaagttcaacg 3930778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 28949902 - 28949820
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||| | | |||  |||| ||||||||||||||| ||||    
T  28949902 tagctcaagttcagctcatttaattaacgaacttaatttttagctcaattccagctcgttaggttcatgaaccaagttcaacg 28949820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 42072084 - 42072166
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| |||||||| |||||| ||||    
T  42072084 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaacg 42072166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 43052873 - 43052955
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    ||||||||||||||||||| || |||||||||||||||||| |||||| | | ||| ||||| ||||||||||||||| ||||    
T  43052873 tagctcaagttcagctcatctaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcaacg 43052955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 40480197 - 40480074
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggct-tattagattcatgaaccaagtttaacgaactaattattga- 117  Q
    |||| |||||||||| |||||||| |||||||||||||| || ||||||| |||||||   || | ||||||||||||||| |||||||||||||  ||     
T  40480197 tataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttttggttcatgaaccaagttcaacgaactaattaccgac 40480098  T
Q  118 --gagttccgaactttagtcgagt 139  Q
      ||||||||||||||| ||||||    
T  40480097 tcgagttccgaactttattcgagt 40480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 26719820 - 26719892
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagt 98  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||| || ||| | ||||||||||||||    
T  26719820 tcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagt 26719892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 36472444 - 36472524
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||| || ||||||||||||| ||||||||||| ||||| ||||||| ||| | ||||||||||||||| ||||||    
T  36472444 tcaagttcaacttatttatttaacgagcttaattttcaactcaagttcggctcatttggttcatgaaccaagttcaacgaa 36472524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 45176246 - 45176338
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| || ||| |||  || | ||||||||||||||| |||| | |||||||    
T  45176246 tagctcaagttcaactcatttaattaacgaacttaattttcagctaaagttcagctcgtttggttcatgaaccaagttcaacggattaattat 45176338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 15434244 - 15434291
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaa 69  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  15434244 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaa 15434291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 23237664 - 23237585
Alignment:
Q  19 ctatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagt 98  Q
    ||||| |||||||||| |||||||| ||||||||||||||| | | ||||| ||||||| ||||| ||||||||||||||    
T  23237664 ctataactcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagt 23237585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 44422045 - 44421962
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaactt-aattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||| ||| |||  || | ||||||||||||||| |||||    
T  44422045 agctcaagttcagctcatttgtttaacgaacttaaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacga 44421962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 26216273 - 26216355
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||| | | |||  |||| ||||| ||||||||| ||||    
T  26216273 tagctcaagttcagctcctttaattaacgaacttaattttcagctcaagtccagctcgttaggttcataaaccaagttcaacg 26216355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 18740359 - 18740282
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaa 102  Q
    |||||||||  |||||||||||||||| ||||||||||| ||||| |||| || ||| | ||||||||||||||||||    
T  18740359 ctcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtttaa 18740282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 18250133 - 18250053
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||| |||||||||||||||| | ||||||||| ||||| |||| || ||| | ||||||||||||||| ||||||    
T  18250133 tcaagttcaactcatttatttaacgagcataattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaa 18250053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 33899082 - 33898998
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatt 112  Q
    ||||||| |||||||||||||||| ||||||||||| ||||| |||| || ||| | ||||||||||||||  || |||||||||    
T  33899082 aagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaactaatt 33898998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 3942175 - 3942254
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||||||||||||| ||| || |||||||||||||||||||||| |  || | ||| | |||||||||||||||    
T  3942175 tatagctcaagttcagctcaattaattcacgaacttaattttcagctcaagtctggttcatttggttcatgaaccaagtt 3942254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 33124700 - 33124743
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaa 69  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  33124700 tcaaattcagctcatttatttaacgaacttaattttcagctcaa 33124743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 222369 - 222287
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||| ||| |||  || | |||||||||||| || |||||    
T  222369 agctcaagttcagctcatttgtttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaaccaaattcaacga 222287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 32356968 - 32357054
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    ||||||| ||| |||| ||||||||||| ||||||| ||||||||||||| |||   |||||||| |||||| |||||| |||||||    
T  32356968 aagttcaactcgtttacttaacgaactttattttcaactcaaattcggctcatttagttcatgaatcaagttcaacgaattaattat 32357054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 36927000 - 36927082
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||||| | |  ||  |||| ||||||||||||||| ||||    
T  36927000 tagctcaagttcaactcatttaattaacgaacttaatttttagctcaagtccaactcgttaggttcatgaaccaagttcaacg 36927082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 33019321 - 33019394
Alignment:
Q  41 ttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    |||||||||||  |||||||||| ||||| |||| |||||| ||||| ||||||||||| ||||||| ||||||    
T  33019321 ttatttaacgagtttaattttcaactcaagttcgacttatttgattcgtgaaccaagttcaacgaaccaattat 33019394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 48634462 - 48634531
Alignment:
Q  36 ctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||||||||||||||||||| ||||||| |||  || ||| | ||||||||||||||| |||||    
T  48634462 ctcatttatttaacgaacttaatttttagctcaagttcaactcatttggttcatgaaccaagttcaacga 48634531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 17025502 - 17025422
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||  |||||||||||||||| ||||||||||| ||||| |||| || ||| | ||| ||||||||||| |||||    
T  17025502 ctcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacga 17025422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 46573753 - 46573673
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||  |||||||||||||||| ||||||||||| || || |||| || ||| | ||||||||||||||| |||||    
T  46573753 ctcaagttcgactcatttatttaacgagcttaattttcaacttaagttcgactcatttggttcatgaaccaagttcaacga 46573673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 49034364 - 49034284
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||  ||||||||||| |||| ||||||||||| ||||| |||| || ||| | ||||||||||||||| ||||||    
T  49034364 tcaagttcgactcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaa 49034284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 17608711 - 17608790
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||| ||||||||| |||| ||| || ||||||||||||||||| |||| ||||||| ||| | ||||| |||||||||    
T  17608711 tatagatcaagttcaactcaattagttgacgaacttaattttcagatcaagttcggctcatttggttcatcaaccaagtt 17608790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 37401712 - 37401633
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||| ||||||||| ||| || |||||||||||||||| ||||| || |||| ||| | |||||||| ||||||    
T  37401712 tatagctcaacttcagctcaattagttgacgaacttaattttcaactcaagtttggctcatttggttcatgaatcaagtt 37401633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 41449755 - 41449798
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctca 68  Q
    ||||||||||||| |||||||||||||| |||||||||||||||    
T  41449755 ctcaagttcagctaatttatttaacgaatttaattttcagctca 41449798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 33171675 - 33171601
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||| ||| ||| ||| | ||||| || ||||||    
T  33171675 ctcaagttcggctcatttatttaatgaacttaatttttagctcaagttcagctcatttggttcataaatcaagtt 33171601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 2466655 - 2466614
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctcaa 69  Q
    ||||| ||||||||||||||||||||| ||||||||||||||    
T  2466655 aagtttagctcatttatttaacgaactaaattttcagctcaa 2466614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 20401000 - 20401088
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatta 113  Q
    ||||||||||||||||||| |||| ||||||||| || ||||||| ||| | | | ||| |||||||||||| || || | ||||||||    
T  20401000 ctcaagttcagctcatttaattaaagaacttaatatttagctcaagttcagttcagtaggttcatgaaccaaattcaatggactaatta 20401088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 21760726 - 21760643
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||||||| ||||||||||||||||  ||| |||||| ||||| |||| || ||| | ||| ||||| ||||| ||||||    
T  21760726 agctcaagttcaactcatttatttaacgagtttagttttcaactcaagttcgactcatttggttcgtgaacaaagttcaacgaa 21760643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 27231685 - 27231606
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||| |||||| | ||| ||| || ||||||||||||||||| |||| ||||||| ||| ||| |||||| ||||||    
T  27231685 tatagcttaagttcggttcaattagttgacgaacttaattttcagttcaagttcggctcatttgatacatgaatcaagtt 27231606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 28759500 - 28759438
Alignment:
Q  44 tttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||||||||||||||| |||||||||  |  ||| ||||||||| ||||||| ||||||    
T  28759500 tttaacgaacttaattttcaactcaaattcaacccatttgattcatgagccaagttgaacgaa 28759438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 29527385 - 29527431
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagct 66  Q
    ||||| ||||||| |||||||||| |||||||||||||||| |||||    
T  29527385 tatagttcaagtttagctcatttaattaacgaacttaatttacagct 29527431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 44994105 - 44994056
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcg 74  Q
    ||||| ||||||||| ||| ||| ||||||||||||||||||||| ||||    
T  44994105 ctcaaattcagctcaattagttagcgaacttaattttcagctcaagttcg 44994056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 23223601 - 23223561
Alignment:
Q  19 ctatagctcaagttcagctcatttatttaacgaacttaatt 59  Q
    ||||| |||||||||| |||||||| |||||||||||||||    
T  23223601 ctataactcaagttcaactcatttaattaacgaacttaatt 23223561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 29037915 - 29037847
Alignment:
Q  31 ttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||| ||||||| ||||||| |||||||||||| ||||| |||| || ||| | ||||||||| |||||    
T  29037915 ttcaactcatttgtttaacggacttaattttcaactcaagttcgtctcatttggttcatgaacaaagtt 29037847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 31869591 - 31869673
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    ||||||||||| |||||||||||||||||||||||||||||||| || ||||||| ||| | ||||||||||||||| |||||    
T  31869591 agctcaagttcggctcatttatttaacgaacttaattttcagcttaagttcggctcatttggttcatgaaccaagttcaacga 31869673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 50447336 - 50447429
Alignment:
Q  21 atagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    |||| ||||||||| |||||||||||||||||||||||||| || |||| ||||||| ||| | ||||| |||||||||||||||| |||||||    
T  50447336 atagttcaagttcaactcatttatttaacgaacttaattttaagttcaagttcggctcatttggttcataaaccaagtttaacgaattaattat 50447429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 24469961 - 24469879
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  24469961 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 24469879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 25125031 - 25124945
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||||||||||||||| ||| || ||||| |||||||||||||||| ||||||| ||| | ||||||||||||||| ||||||    
T  25125031 tatagctcaagttcagctcaattagttcacgaaattaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaa 25124945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 32179854 - 32179936
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | ||| ||||| || |||||||||||| ||||    
T  32179854 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggtttatgaaccaagttcaacg 32179936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 35810712 - 35810798
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||| |||||||| ||||| |||||| |||||||||||||||||||||| ||||||| ||| | ||||||||||||||| ||||||    
T  35810712 tatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaa 35810798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 37441330 - 37441248
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  37441330 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 37441248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 42937069 - 42937147
Alignment:
Q  21 atagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||||||||||||||| ||| || |||||||||||||| ||||||| ||||||| ||| |||||||||||||||||    
T  42937069 atagctcaagttcagctcaattagttgacgaacttaattttaagctcaagttcggctcatttgattcatgaaccaagtt 42937147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 47603006 - 47602924
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  47603006 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 47602924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 36419097 - 36419174
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||| | | ||| ||||| |||||||||||||||    
T  36419097 tagctcaagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagtt 36419174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 39802912 - 39802827
Alignment:
Q  21 atagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| || ||| | ||||||||||| ||| ||||||    
T  39802912 atagctcaagttcggctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccatgttcaacgaa 39802827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 19508522 - 19508644
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga-- 117  Q
    |||| |||||| ||| |||||||| |||||||||||||| || ||||||| |||||||  || | ||||||||||||||| |||||||||||||  ||      
T  19508522 tataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagt 19508621  T
Q  118 -gagttccgaactttagtcgagt 139  Q
     ||||||||||||||| ||||||    
T  19508622 cgagttccgaactttattcgagt 19508644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 40159770 - 40159698
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagt 98  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||| || ||| ||||||||||||||||    
T  40159770 tcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttgattcatgaaccaagt 40159698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 15306490 - 15306581
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    ||||||||||| |||||||||||||| ||||||||||||| |||||| ||| ||| ||| | ||||||||||||||| || ||| |||||||    
T  15306490 agctcaagttcggctcatttatttaatgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgaattaattat 15306581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 23915738 - 23915621
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga---gagt 121  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||| ||| ||| | ||||||||||||||| |||||  ||||| ||||   ||||    
T  23915738 ctcaagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatttggttcatgaaccaagttcaacgagataattgttgaatcgagt 23915639  T
Q  122 tccgaactttagtcgagt 139  Q
    | |||||||| |||||||    
T  23915638 ttcgaacttttgtcgagt 23915621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 7702831 - 7702913
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  7702831 tagcttaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttagcttcatgaaccaagttcaacg 7702913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 13645326 - 13645233
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatta 113  Q
    |||| ||||| |||| |||||||| |||||||||||||| || ||||||| |||||||  || ||||||||||||||||| || ||||||||||    
T  13645326 tataactcaaattcaactcatttacttaacgaacttaatctttagctcaagttcggctcgtttgattcatgaaccaagttaaatgaactaatta 13645233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 42916254 - 42916181
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||| ||||||| ||| | |||||||||||||||    
T  42916254 tcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtt 42916181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 29677659 - 29677571
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    ||||||||||||||||||||||| || ||||||||||| ||||| |||| || ||| | ||| ||||||||||| ||||||| ||||||    
T  29677659 tcaagttcagctcatttatttaaagagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattat 29677571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 7596387 - 7596466
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||| |||||||||||||| ||| ||| ||||||||||||||||||||| ||||||| ||| | ||||| |||||||||    
T  7596387 tatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcataaaccaagtt 7596466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 46265090 - 46265011
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||| |||||||||||||| ||| ||| ||||||||||||||||||||| ||||||| |||   |||||||||||||||    
T  46265090 tatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttagttcatgaaccaagtt 46265011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 27076660 - 27076567
Alignment:
Q  21 atagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    |||| ||||||||| ||| |||||||||||||||||| ||| ||||||| ||||||| |||   |||||| |||||||| |||||| |||||||    
T  27076660 atagttcaagttcaactcgtttatttaacgaacttaactttgagctcaagttcggctcatttagttcatggaccaagttcaacgaattaattat 27076567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 43087612 - 43087519
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatta 113  Q
    |||| |||||||||| |||||||| |||||||||||||| || || |||| |||||||  || | ||||||||||||||| ||| |||||||||    
T  43087612 tataactcaagttcaactcatttaattaacgaacttaatctttagttcaagttcggctcgtttggttcatgaaccaagttcaacaaactaatta 43087519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 23916808 - 23916884
Alignment:
Q  24 gctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagttt 100  Q
    |||||||||||||||| ||| || |||||||||||||||||||||| || |||| ||| | || |||||||||||||    
T  23916808 gctcaagttcagctcaattagttgacgaacttaattttcagctcaagttaggctcatttggttaatgaaccaagttt 23916884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 28006349 - 28006429
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||  |||||||||||||||| ||||||||||| ||||| |||| || ||| | ||||||||||||||| |||||    
T  28006349 ctcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacga 28006429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 40002888 - 40002960
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaa 92  Q
    ||||||||||||||| |||| ||| || |||||||||||||||| ||||| ||||||| ||| ||||||||||    
T  40002888 tatagctcaagttcaactcaattagttgacgaacttaattttcaactcaagttcggctcatttgattcatgaa 40002960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 45653577 - 45653485
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatt 112  Q
    ||||| ||| |||||| |||||||  |||||||||||| ||| ||||||| ||||||| ||| | ||||||||||||||| |||||| |||||    
T  45653577 tatagttcatgttcagttcatttagctaacgaacttaacttttagctcaagttcggctcatttggttcatgaaccaagttcaacgaaataatt 45653485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 5204609 - 5204530
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    ||||||||  |||||||||||||||||||||||||||| ||||| |||| || ||| | |||| |||||||||| |||||    
T  5204609 tcaagttcgactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcacgaaccaagttcaacga 5204530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 3577664 - 3577750
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggctt-attagattcatgaaccaagtttaacga 105  Q
    ||||||||||||||||||||||||||||||||| | | |||||||||||| ||    || ||| ||||||||||||||||| |||||    
T  3577664 tatagctcaagttcagctcatttatttaacgaattaatttttcagctcaagttttaattcatttgattcatgaaccaagttcaacga 3577750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 14770661 - 14770583
Alignment:
Q  21 atagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||||||||||||||| ||| || |||||||||||||| || |||| ||||||| ||| | ||||| |||||||||    
T  14770661 atagctcaagttcagctcaattagttcacgaacttaatttttagatcaagttcggctcatttggttcataaaccaagtt 14770583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 20349140 - 20349234
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||| || || ||||||| ||| | |  ||||| |||||| |||||| |||||||    
T  20349140 tatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaattat 20349234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 15662943 - 15663040
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga 117  Q
    ||||||| |||||| | ||| ||| || |||||||||||||||||||||| ||||||| ||| | | |||||||||||||  |||||  |||||||||    
T  15662943 tatagcttaagttcggttcaattagttgacgaacttaattttcagctcaagttcggctcatttggtacatgaaccaagttcgacgaatcaattattga 15663040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 44596527 - 44596596
Alignment:
Q  36 ctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    ||||||||||||||||||||||||||||| |||| ||| ||| ||| | |||||||||||| || |||||    
T  44596527 ctcatttatttaacgaacttaattttcagttcaagttcagctcatttggttcatgaaccaaattcaacga 44596596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 7995971 - 7996051
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||| |||||||||||||||||| ||||||||| | || || |||| || ||||| || |||||||||||| ||||||    
T  7995971 tcaagttgagctcatttatttaacgagcttaattttaaacttaagttcgactcattaggtttatgaaccaagttcaacgaa 7996051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 14796590 - 14796696
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattgag---agttcc 124  Q
    ||||||| |||||||||||||||||||||||||  || |||| |||  |||| | | ||||||||||| ||| |||||| ||||||| |||   ||||||    
T  14796590 aagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaattatcgagtcaagttcc 14796689  T
Q  125 gaacttt 131  Q
    |||||||    
T  14796690 gaacttt 14796696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 14805464 - 14805570
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattgag---agttcc 124  Q
    ||||||| |||||||||||||||||||||||||  || |||| |||  |||| | | ||||||||||| ||| |||||| ||||||| |||   ||||||    
T  14805464 aagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaattatcgagtcaagttcc 14805563  T
Q  125 gaacttt 131  Q
    |||||||    
T  14805564 gaacttt 14805570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 15257311 - 15257239
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagt 98  Q
    |||| |||| |||||||||||||||| ||||||||||| ||||| |||| || ||| | ||||||||||||||    
T  15257311 tcaaattcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagt 15257239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 33233696 - 33233624
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaa 92  Q
    ||||||||||||| | ||| |||| ||||||| ||||||||||||||||| |||  |||||| ||||||||||    
T  33233696 tatagctcaagttaaactcgtttagttaacgaccttaattttcagctcaagttcaacttatttgattcatgaa 33233624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 45581154 - 45581060
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    ||||||| | ||||| |||||||| |||| ||||||||||||| |||||| |||  || ||| | ||||||||||||||| |||||  |||||||    
T  45581154 tatagctaatgttcatctcatttagttaatgaacttaattttccgctcaagttcaactcatttggttcatgaaccaagttcaacgagataattat 45581060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 20347671 - 20347752
Alignment:
Q  31 ttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatt 112  Q
    ||||||||||||| ||||||||||||||||||| || || ||||||| ||| | | |||||| ||| || |||||| |||||    
T  20347671 ttcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaatt 20347752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 28020600 - 28020681
Alignment:
Q  34 agctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattatt 115  Q
    |||||||||| |||  |||||||||| |||| |||| |||  || ||| ||||||||||| |||||||||||| ||||||||    
T  28020600 agctcatttagttagagaacttaattatcagttcaagttcaactcatttgattcatgaactaagtttaacgaattaattatt 28020681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 29113669 - 29113585
Alignment:
Q  21 atagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||||||||| ||| ||||||   | |||||||||||||| |||||||| || |||| | ||||||||||||||| ||||||    
T  29113669 atagctcaagttcacctcttttattgg-caaacttaattttcagttcaaattcagcctatttggttcatgaaccaagttcaacgaa 29113585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 51432344 - 51432271
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagt 98  Q
    ||||||||||||| |||||||||||||  ||||||||||||| || |||  || ||| | ||||||||||||||    
T  51432344 ctcaagttcagctaatttatttaacgattttaattttcagcttaatttcaactcatttggttcatgaaccaagt 51432271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 14101864 - 14101936
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaa-ttttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||| |||| ||||||||||||| |||| |||||||||||||||| ||| ||| | ||||||||| |||||    
T  14101864 aagttcggctcgtttatttaacgaatttaatttttcagctcaaattcagctcatttggttcatgaactaagtt 14101936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 21680776 - 21680708
Alignment:
Q  46 taacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    |||||||||||||||| ||||||| ||||||| |||  |||||| ||||||||| |||||  |||||||    
T  21680776 taacgaacttaatttttagctcaagttcggctcatttcattcataaaccaagttcaacgagataattat 21680708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 24575908 - 24575988
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||  |||||||||||||| | ||||||||||| ||||| ||||  | ||| | ||||||||||||||| |||||    
T  24575908 ctcaagttcgactcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacga 24575988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 38061318 - 38061238
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||| |||||||||||||||| ||||||||| | || || |||| || ||||| ||||| || |||||| ||||||    
T  38061318 tcaagttcaactcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcataaatcaagttcaacgaa 38061238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 48575221 - 48575133
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatta 113  Q
    |||||||||| ||||||||||| |||||||||||||| |  |||| ||||  |  || | ||||||||||||||| |||||| ||||||    
T  48575221 ctcaagttcaactcatttatttgacgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagttcaacgaattaatta 48575133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 14578703 - 14578652
Alignment:
Q  48 acgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||||||||||||| | ||||||| ||| | |||||||||||||||    
T  14578703 acgaacttaattttcagctccagttcggctcatttggttcatgaaccaagtt 14578652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 31816567 - 31816648
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||| |||||||||||| |||| ||||||||||  || || |||  || ||| | ||||||||||||||| ||||||    
T  31816567 ctcaagttcggctcatttatttgacgagcttaattttcgactgaagttcaactcatttggttcatgaaccaagttcaacgaa 31816648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 7956324 - 7956396
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagt 98  Q
    ||||||||| |||||||||||||| | |||||||||||  |||| |||| || |||   ||||||||||||||    
T  7956324 tcaagttcaactcatttatttaacaagcttaattttcaattcaagttcgactaattttgttcatgaaccaagt 7956396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 12224684 - 12224636
Alignment:
Q  57 attttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    ||||||||||||| ||||||| ||| | ||||||||||||||| |||||    
T  12224684 attttcagctcaagttcggctcatttggttcatgaaccaagttcaacga 12224636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 15014320 - 15014388
Alignment:
Q  31 ttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||||| ||| || | |||||||||||||| ||||| ||||||| ||| | |||||||| ||||||    
T  15014320 ttcagctcaattaattgatgaacttaattttcaactcaagttcggctcatttggttcatgaatcaagtt 15014388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 11161568 - 11161650
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  11161568 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 11161650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 3307931 - 3308007
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||| ||| | ||||||||| |||||    
T  3307931 agctcaagttcggctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaactaagtt 3308007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 43967504 - 43967618
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga-- 117  Q
    |||| |||||||||| |||||||| |||||||||||||| || ||||||| |||||||  || | |||||||||||| || ||||||||||||| |||      
T  43967504 tataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaaattcaacgaactaattactgagt 43967603  T
Q  118 -gagttccgaacttt 131  Q
     ||||||||||||||    
T  43967604 cgagttccgaacttt 43967618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 33280123 - 33280044
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||| |||||||||||||| ||| || |||||||||||||| |||||| |||||||| ||| | |||||||||||||||    
T  33280123 tatagttcaagttcagctcaattagttgacgaacttaattttaagctcatattcggctcatttggttcatgaaccaagtt 33280044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 453479 - 453561
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    ||||||||||||| |||||||| ||||||||||||||||||| ||||| | | |||  |||| ||||||||||||||| ||||    
T  453479 tagctcaagttcaactcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacg 453561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 9135946 - 9136031
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    ||||| |||||| ||| ||||||| ||||| ||||||| ||||||||||| ||| ||||||| ||||||| ||||||||| |||||    
T  9135946 tatagatcaagtccagttcatttagttaacaaacttaaatttcagctcaagttcagcttatttgattcataaaccaagttcaacga 9136031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 27189228 - 27189149
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||| |||||||||| |||| ||| || |||||||||||||||||||||| |||| || ||| | |||||||||||||||    
T  27189228 tataactcaagttcaactcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagtt 27189149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 10749365 - 10749311
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcg 74  Q
    |||||||||||||||||||| ||| || |||||||||||||||||||||| ||||    
T  10749365 tatagctcaagttcagctcaattagttgacgaacttaattttcagctcaagttcg 10749311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 23181155 - 23181225
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaa 96  Q
    |||||||||||||| ||| || ||||||||||||||||| |||| ||||||| ||| | ||||||||||||    
T  23181155 tcaagttcagctcaattagtttacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaa 23181225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 9412670 - 9412585
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||| ||||| |||||||||||||| ||||||| |||||| ||| ||||| ||| ||| ||| | ||||||||||||||| |||||    
T  9412670 tataactcaaattcagctcatttatgtaacgaatttaattctcaactcaagttcagctcatttggttcatgaaccaagttcaacga 9412585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 34516132 - 34516211
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||| |||||||||||||| ||| |  |||||||||||||||||||||| ||||||| ||| | || ||||| ||||||    
T  34516132 tatagttcaagttcagctcaattaatcgacgaacttaattttcagctcaagttcggctcatttggttgatgaatcaagtt 34516211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 28492790 - 28492714
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatta 113  Q
    ||||||| ||||||||| ||| |||||||||||||| |||||||| ||         |||||||||||||||||||||||||||||    
T  28492790 aagttcaactcatttatctaatgaacttaattttcaactcaaatttgg---------ttcatgaaccaagtttaacgaactaatta 28492714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 22564006 - 22564086
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||| | ||||| |||| |||| ||||||||||| ||||| ||||  ||||| | ||||||||||||||| ||||||    
T  22564006 tcaagttcggttcattcatttgacgagcttaattttcaactcaagttcgatttatttggttcatgaaccaagttcaacgaa 22564086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 34655029 - 34655151
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattgag- 118  Q
    |||| |||||||| | |||||||| ||||| |||||||| || ||||||| |||| ||  || | ||||||||| ||||| ||| |||||||||  |||     
T  34655029 tataactcaagtttaactcatttagttaacaaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaactaattaccgagt 34655128  T
Q  119 --agttccgaactttagtcgagt 139  Q
      |||||||||||||| ||||||    
T  34655129 cgagttccgaactttattcgagt 34655151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 1091725 - 1091815
Alignment:
Q  24 gctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    ||||||||||| ||||||| ||| |||||||||||||| | ||||  |||| ||  || | |||||||| |||||| |||||| |||||||    
T  1091725 gctcaagttcaactcatttgtttgacgaacttaattttaaactcaggttcgactcgtttggttcatgaatcaagttcaacgaattaattat 1091815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 35058301 - 35058395
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    ||||| |||| ||||  ||||||| ||||| ||||| ||||||||||||| ||| ||| ||| ||||  |||||||| || |||||| |||||||    
T  35058301 tatagatcaaattcaaatcatttagttaacaaacttgattttcagctcaagttcagctcatttgattgttgaaccaaattaaacgaattaattat 35058395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 10961942 - 10961856
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||| |||||||||||||| ||| || ||||||||||||||||||||||||||| || ||| | ||||||||||||||| ||||||    
T  10961942 tatagttcaagttcagctcaattagttgacgaacttaattttcagctcaaattcgactcatttggttcatgaaccaagttcaacgaa 10961856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 18095514 - 18095599
Alignment:
Q  21 atagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||||||||| |||||||||||||||||||||||||| | ||||| |||| |||||| | ||| ||||||||||| ||||||    
T  18095514 atagctcaagttcatctcatttatttaacgaacttaatttttaactcaagttcgacttatttggttcgtgaaccaagttcaacgaa 18095599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 9950906 - 9950827
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||||||||||||| ||| || |||||||||||||||| ||||| ||||||| ||| | |||||||||||||||    
T  9950906 tatagctcaagttcagctcaattagttgacgaacttaattttcaactcaagttcggctcatttggttcatgaaccaagtt 9950827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 10346720 - 10346799
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  10346720 ctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 10346799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 4441441 - 4441355
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatt 112  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||| ||| |||   ||| ||||||||||| ||||| ||||||    
T  4441441 tcaagttcagctcatttatttaacgaacttaattttcaactcaagttcagctcatttagttcgtgaaccaagttcaacgagctaatt 4441355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 18099811 - 18099896
Alignment:
Q  21 atagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    |||||||||||||| |||||||||||||||||||||||| | | |||||||||| || ||| | ||| ||||||||||| ||||||    
T  18099811 atagctcaagttcatctcatttatttaacgaacttaattgttaactcaaattcgactcatttggttcgtgaaccaagttcaacgaa 18099896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 3081858 - 3081770
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||| |||| || ||| | ||| ||||||||||| ||||||| ||||||    
T  3081858 tcaagttcagctcatttaattaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattat 3081770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 12428881 - 12428929
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctca 68  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12428881 tatagctcaagttcggctcatttatttaacgaacttaattttcagctca 12428929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 13312022 - 13312094
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagt 98  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||| || ||| | ||||||||||||||    
T  13312022 tcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagt 13312094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 33110452 - 33110574
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga-- 117  Q
    |||| |||||||||  |||||||| |||||||||||||| || |||| || |||||||  || | ||||||||||||||| |||||||||||||  ||      
T  33110452 tataactcaagttcgactcatttagttaacgaacttaatctttagcttaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagt 33110551  T
Q  118 -gagttccgaactttagtcgagt 139  Q
     ||||||||||||||| ||||||    
T  33110552 cgagttccgaactttattcgagt 33110574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 5640398 - 5640319
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||| |||||||||||||| ||| || ||||||||||||||||| |||| ||||||| ||| | |||||||||||||||    
T  5640398 tatagttcaagttcagctcaattagttgacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaagtt 5640319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 1501857 - 1501927
Alignment:
Q  35 gctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    ||||||||||||||||||||||||||||||||||| ||||| | ||| | ||||||||| ||||| |||||    
T  1501857 gctcatttatttaacgaacttaattttcagctcaagttcggttcatttggttcatgaacgaagttcaacga 1501927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 7437304 - 7437385
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaac 107  Q
    |||||||||||||||||||||||||| ||||||||||| || || |||| || ||| | ||| ||||||||||| |||||||    
T  7437304 tcaagttcagctcatttatttaacgagcttaattttcaactaaagttcgactcatttggttcgtgaaccaagttcaacgaac 7437385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 22295910 - 22296025
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga-- 117  Q
    |||| ||||| |||| | |||||| |||||||||||||| || ||||||| |||||||  || | ||||||||||||||||||  ||||||||| |||      
T  22295910 tataactcaaattcaacacatttacttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtttaataaactaattactgagt 22296009  T
Q  118 -gagttccgaacttta 132  Q
     |||||||||||||||    
T  22296010 cgagttccgaacttta 22296025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 6999267 - 6999355
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    |||||||||| |||||| |||||| ||||||||||||||||||| ||| ||| |||   ||||| ||||||||| |||||| |||||||    
T  6999267 tcaagttcagttcatttgtttaacaaacttaattttcagctcaagttcagctcatttagttcattaaccaagttcaacgaattaattat 6999355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 32163539 - 32163610
Alignment:
Q  24 gctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaacca 95  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||| ||  ||| ||||| |||||||||||    
T  32163539 gctcaagttaagctcatttagttaacgaacttaattttcaactcaagtttagctcattaggttcatgaacca 32163610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 8200638 - 8200683
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctc 67  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||    
T  8200638 tagctcaagttcaactcatttaattaacgaacttaattttcagctc 8200683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 11460147 - 11460103
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaa 69  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||    
T  11460147 ctcaagttcagctcatttatttaacaaacttaattctcagctcaa 11460103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 13355761 - 13355722
Alignment:
Q  30 gttcagctcatttatttaacgaacttaattttcagctcaa 69  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  13355761 gttcagctcatttaattaacgaacttaattttcagctcaa 13355722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 27985030 - 27984957
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||||||| ||| || || |||||||||||||| |||| ||||||| ||| | ||||| |||||||||    
T  27985030 tcaagttcagctcaattagtttacaaacttaattttcagttcaagttcggctcatttggttcataaaccaagtt 27984957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 21298912 - 21298955
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctca 68  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||    
T  21298912 ctcaagttcagctcagttaattaacaaacttaattttcagctca 21298955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 9463501 - 9463377
Alignment:
Q  19 ctatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga- 117  Q
    |||||| | |||||| |||| ||||  |||||||||||||||| || | |||||| ||| ||| | ||||| ||| |||||||| ||  ||||||| ||     
T  9463501 ctatagtttaagttcggctcgtttaaataacgaacttaatttttagtttaaattcagctcatttggttcataaactaagtttaatgagttaattatcgag 9463402  T
Q  118 --gagttccgaactttagtcgagta 140  Q
      ||||||||||||||| |||||||    
T  9463401 tcgagttccgaactttattcgagta 9463377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 2962833 - 2962796
Alignment:
Q  35 gctcatttatttaacgaacttaattttcagctcaaatt 72  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  2962833 gctcatttatttaactaacttaattttcaactcaaatt 2962796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 17441168 - 17441245
Alignment:
Q  36 ctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatta 113  Q
    ||||||||||| |||| ||||||||||| ||||| |||  || ||| | ||||||||| ||||| |||||| ||||||    
T  17441168 ctcatttatttgacgagcttaattttcaactcaagttcaactcatttggttcatgaactaagttcaacgaattaatta 17441245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 3409331 - 3409249
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||| | | ||| | ||||||||||||||| |||||    
T  3409331 agctcaaattcagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 3409249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 26436350 - 26436432
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||  ||| |||  |||| ||||||||||||||| ||||    
T  26436350 tagctcaagttcagctcatttaattaacgaacttaattttcagctcacgttcagctcgttaggttcatgaaccaagttcaacg 26436432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 2647120 - 2647027
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatta 113  Q
    |||| |||||||||| || ||||| ||||||||||||||||| ||||||| |||||||  || | ||||||||||||||| |||||||||||||    
T  2647120 tataactcaagttcaacttatttagttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaatta 2647027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 34116319 - 34116240
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||||| ||| | ||||||||| |||||    
T  34116319 tatagctcaagttcagctcaattatttagcgaacttaattttaagctcaagttcggctcatttggttcatgaactaagtt 34116240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 40458921 - 40459012
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattga 117  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| |||| || ||| | ||| ||||||||||| ||| ||| |||||||||    
T  40458921 tcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattattga 40459012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 27634667 - 27634749
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||| ||||| ||||    
T  27634667 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacg 27634749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 33831491 - 33831565
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaa 96  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||    
T  33831491 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaa 33831565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 34064701 - 34064783
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||| ||||| ||||    
T  34064701 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacg 34064783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 44740626 - 44740544
Alignment:
Q  23 agctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| ||| |||  || | ||||||||||||||| |||||    
T  44740626 agctcaagttcagctcatttgtttaacgaacttaatttttagctcaagttcagctcgtttggttcatgaaccaagttcaacga 44740544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 24844804 - 24844727
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||||||||||||| |||| |||||||||||||||| ||| ||| ||| | ||||||||||||||| |||||    
T  24844804 aagttcagctcatttatttatcgaatttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacga 24844727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 2578073 - 2578152
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||| ||||| | ||||||||||||||||| |||||||||||||||| ||| ||| ||| |||||||||| ||||||    
T  2578073 tatagcttaagtttaactcatttatttaacgaatttaattttcagctcaagttcagctcatttgattcatgaatcaagtt 2578152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 11027902 - 11027981
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||||||||||||| ||| || |||||||||||||| || |||| ||||||| ||| | |||||||||||||||    
T  11027902 tatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagtt 11027981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 14103269 - 14103359
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattattgag 118  Q
    |||||| ||||||||| |||||||||||||||||||| | || |||| |||||| |  |||||||||||||| |||||  |||||||||||    
T  14103269 aagttctgctcatttaattaacgaacttaattttcagtttaagttcgacttatttggctcatgaaccaagttaaacgagttaattattgag 14103359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 36538652 - 36538734
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| | |  ||  |||| ||||||||||||||| ||||    
T  36538652 tagctcaagtttagctcatttaattaacgaacttaattttcagctcaagtccaactcgttaggttcatgaaccaagttcaacg 36538734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 11007112 - 11007032
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||| |||| || ||| | ||| ||||||||||| ||||||    
T  11007112 tcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaa 11007032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 30713150 - 30713229
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||||||||||| |||| ||| || |||||||||| ||||||||||  ||||||| ||| | |||||||||||||||    
T  30713150 tatagctcaagttcaactcaattagttgacgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagtt 30713229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 41959147 - 41959221
Alignment:
Q  30 gttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||||||||| ||||||||||||||||||||||||| | | |||  |||| |||||||| |||||| ||||    
T  41959147 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaacg 41959221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 9963758 - 9963838
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacga 105  Q
    |||||||||||||||||||| |||||||||||||||| | || || ||| ||| ||| | |||||||||| |||| |||||    
T  9963758 ctcaagttcagctcatttatctaacgaacttaatttttaacttaagttcagctcatttggttcatgaacccagttcaacga 9963838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 33164110 - 33164042
Alignment:
Q  36 ctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacg 104  Q
    |||||||| ||||||||||||||||||||||||| | | |||  |||| ||||||||||||||| ||||    
T  33164110 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 33164042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 38409709 - 38409641
Alignment:
Q  28 aagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaa 96  Q
    |||||||||||| ||| || || ||||||||||||||||||| ||||||| ||| | ||||||||||||    
T  38409709 aagttcagctcaattagttcacaaacttaattttcagctcaagttcggctcatttggttcatgaaccaa 38409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 40680215 - 40680263
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctca 68  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  40680215 tataactcaaattcagctcatttatttaacgaacataattttcagctca 40680263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 10196938 - 10196868
Alignment:
Q  31 ttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagttta 101  Q
    |||| |||||||||| ||| | || ||||||||||||||| || ||||||| |||||||||||||| ||||    
T  10196938 ttcaactcatttattgaacaagctcaattttcagctcaaaatcagcttatttgattcatgaaccaaattta 10196868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 39690164 - 39690213
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaa 69  Q
    ||||||||||||||| |||| ||| || ||||||||||||||||||||||    
T  39690164 tatagctcaagttcaactcaattagttgacgaacttaattttcagctcaa 39690213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 41332230 - 41332278
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattc 73  Q
    |||| |||| || |||||||||||| |||||||||||||||||||||||    
T  41332230 ctcatgttcggcccatttatttaacaaacttaattttcagctcaaattc 41332278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 1094456 - 1094527
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaa 96  Q
    |||||||||  |||||||||| ||||| ||||||||||| ||||| |||| || ||| | ||||||||||||    
T  1094456 ctcaagttcgactcatttattcaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaa 1094527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 10412434 - 10412488
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcg 74  Q
    |||||||||||| || |||||||||||||||| ||||||||| | ||||| ||||    
T  10412434 tatagctcaagtccaactcatttatttaacgagcttaatttttaactcaagttcg 10412488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 16544016 - 16544053
Alignment:
Q  36 ctcatttatttaacgaacttaattttcagctcaaattc 73  Q
    |||||||||||||||||||||||||| | |||||||||    
T  16544016 ctcatttatttaacgaacttaatttttaactcaaattc 16544053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 19292 - 19369
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||  |||| |||||||||||||||    
T  19292 tagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagtt 19369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 26767 - 26688
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    ||||||| |||||||||||| ||| || |||||||||||||||||||||| |||| || ||| |||||||||||||||||    
T  26767 tatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagtt 26688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 7448 - 7375
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||| ||||||| ||| | |||||||||||||||    
T  7448 tcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtt 7375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 911 - 827
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||||||| |||||||||||||||| ||||||||||| | |||||||  || ||| | ||||||||||||||| ||||||    
T  911 tagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaacgaa 827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 331 - 252
Alignment:
Q  19 ctatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagt 98  Q
    ||||| |||||||||| |||||||| ||||||||||||||| | | ||||| ||||||| ||||| ||||||||||||||    
T  331 ctataactcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagt 252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 11463 - 11557
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaattat 114  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||| || || ||||||| ||| | |  ||||| |||||| |||||| |||||||    
T  11463 tatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaattat 11557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 9994 - 10075
Alignment:
Q  31 ttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaactaatt 112  Q
    ||||||||||||| ||||||||||||||||||| || || ||||||| ||| | | |||||| ||| || |||||| |||||    
T  9994 ttcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaatt 10075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 21084 - 21167
Alignment:
Q  22 tagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||||||| ||||||||||||| || ||||||||||| ||||| |||| | | || | ||||||||||||||| ||||||    
T  21084 tagctcaagttcaactcatttatttaatgagcttaattttcaactcaagttcgac-tctttggttcatgaaccaagttcaacgaa 21167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 124628 - 124548
Alignment:
Q  19 ctatagctcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtt 99  Q
    |||||| |||| ||||||||||||| ||||| ||||||||  ||||||||| |||| || ||| | |||||||||||||||    
T  124628 ctatagttcaaattcagctcatttaattaacaaacttaataatcagctcaagttcgactcatttggttcatgaaccaagtt 124548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 11384 - 11425
Alignment:
Q  20 tatagctcaagttcagctcatttatttaacgaacttaatttt 61  Q
    ||||||| |||||| |||||||||||||||||||||||||||    
T  11384 tatagcttaagttcggctcatttatttaacgaacttaatttt 11425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 25705 - 25626
Alignment:
Q  26 tcaagttcagctcatttatttaacgaacttaattttcagctcaaattcggcttattagattcatgaaccaagtttaacgaa 106  Q
    ||||||||| |||||||| |||||| ||||||||||||| | || ||| ||| ||| || |||| ||||||||| ||||||    
T  25705 tcaagttcatctcatttaattaacggacttaattttcagtttaagttc-gctcatttgactcataaaccaagttcaacgaa 25626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 96279 - 96315
Alignment:
Q  25 ctcaagttcagctcatttatttaacgaacttaatttt 61  Q
    |||||||||| |||||||||||||||| |||||||||    
T  96279 ctcaagttcaactcatttatttaacgagcttaatttt 96315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University